Query 018784
Match_columns 350
No_of_seqs 229 out of 2514
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 06:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.3E-47 4.5E-52 353.8 39.1 283 11-299 103-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 5.8E-47 2E-51 335.6 39.0 290 6-300 3-301 (304)
3 3ow8_A WD repeat-containing pr 100.0 1.5E-46 5E-51 335.7 39.2 285 13-300 29-320 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 4.6E-46 1.6E-50 335.0 39.8 281 11-298 50-340 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 1.6E-45 5.6E-50 333.3 41.8 284 10-298 58-354 (354)
6 4ery_A WD repeat-containing pr 100.0 5.2E-45 1.8E-49 323.8 43.8 289 7-300 14-311 (312)
7 3frx_A Guanine nucleotide-bind 100.0 2.3E-45 7.9E-50 327.6 39.2 292 4-301 5-317 (319)
8 3iz6_a 40S ribosomal protein R 100.0 3.2E-46 1.1E-50 341.2 32.9 287 12-302 62-376 (380)
9 4g56_B MGC81050 protein; prote 100.0 2E-45 6.8E-50 333.1 33.0 285 13-303 39-345 (357)
10 4gqb_B Methylosome protein 50; 100.0 6.5E-45 2.2E-49 327.9 35.4 284 13-303 27-333 (344)
11 4aow_A Guanine nucleotide-bind 100.0 4.7E-44 1.6E-48 320.3 39.6 287 11-302 33-338 (340)
12 2xzm_R RACK1; ribosome, transl 100.0 2.6E-44 8.7E-49 324.0 37.0 289 10-301 15-340 (343)
13 1nr0_A Actin interacting prote 100.0 4.2E-44 1.4E-48 346.7 40.6 287 12-303 143-569 (611)
14 1erj_A Transcriptional repress 100.0 1.7E-43 5.9E-48 324.5 39.0 282 13-301 61-389 (393)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-43 1.1E-47 317.0 37.9 291 10-305 9-339 (345)
16 2hes_X YDR267CP; beta-propelle 100.0 8.6E-43 2.9E-47 312.4 38.3 288 6-301 4-328 (330)
17 3zwl_B Eukaryotic translation 100.0 4.4E-42 1.5E-46 310.3 42.6 294 3-301 19-346 (369)
18 1nr0_A Actin interacting prote 100.0 3.1E-42 1.1E-46 333.6 40.1 288 9-304 52-358 (611)
19 3dm0_A Maltose-binding peripla 100.0 5.1E-42 1.7E-46 336.9 38.0 286 11-300 377-692 (694)
20 1sq9_A Antiviral protein SKI8; 100.0 1.3E-41 4.5E-46 311.2 35.1 288 6-301 6-395 (397)
21 3i2n_A WD repeat-containing pr 100.0 3.3E-41 1.1E-45 303.6 35.6 297 4-303 6-355 (357)
22 2ymu_A WD-40 repeat protein; u 100.0 1.8E-40 6.1E-45 318.4 42.8 303 12-341 258-563 (577)
23 3ei3_B DNA damage-binding prot 100.0 5E-41 1.7E-45 306.5 36.8 283 11-301 68-382 (383)
24 2pm9_A Protein WEB1, protein t 100.0 1.3E-41 4.3E-46 313.0 32.1 287 15-305 11-341 (416)
25 2ynn_A Coatomer subunit beta'; 100.0 9E-41 3.1E-45 295.8 36.0 252 52-305 4-263 (304)
26 2ymu_A WD-40 repeat protein; u 100.0 2.8E-40 9.5E-45 317.1 41.1 275 12-298 299-577 (577)
27 4e54_B DNA damage-binding prot 100.0 2.3E-41 7.7E-46 314.5 29.9 286 12-303 115-432 (435)
28 3odt_A Protein DOA1; ubiquitin 100.0 6E-40 2.1E-44 290.0 37.4 284 7-304 9-299 (313)
29 2pm7_B Protein transport prote 100.0 3.7E-40 1.3E-44 290.9 35.2 249 11-300 4-284 (297)
30 1k8k_C P40, ARP2/3 complex 41 100.0 5.7E-40 2E-44 297.3 34.2 285 11-301 3-361 (372)
31 1gxr_A ESG1, transducin-like e 100.0 4E-39 1.4E-43 287.5 39.0 282 10-299 45-335 (337)
32 1vyh_C Platelet-activating fac 100.0 9.6E-40 3.3E-44 301.2 35.5 270 54-340 101-393 (410)
33 3k26_A Polycomb protein EED; W 100.0 3.2E-40 1.1E-44 297.9 31.5 287 12-300 14-365 (366)
34 4a11_B DNA excision repair pro 100.0 3.7E-39 1.3E-43 295.2 38.5 294 10-306 37-370 (408)
35 1r5m_A SIR4-interacting protei 100.0 7.5E-39 2.6E-43 294.5 38.9 285 10-300 39-424 (425)
36 3dwl_C Actin-related protein 2 100.0 1.1E-40 3.7E-45 303.3 25.6 287 7-299 2-377 (377)
37 3iz6_a 40S ribosomal protein R 100.0 6.2E-40 2.1E-44 299.5 30.7 289 41-341 46-358 (380)
38 1got_B GT-beta; complex (GTP-b 100.0 9.9E-39 3.4E-43 287.1 38.1 273 51-341 45-326 (340)
39 2pm9_A Protein WEB1, protein t 100.0 1.5E-40 5E-45 305.9 26.4 287 12-301 63-414 (416)
40 3ow8_A WD repeat-containing pr 100.0 6.3E-39 2.2E-43 286.2 35.0 272 51-340 22-303 (321)
41 3dw8_B Serine/threonine-protei 100.0 2.1E-39 7.1E-44 301.2 32.0 278 15-299 27-444 (447)
42 4ggc_A P55CDC, cell division c 100.0 5.1E-38 1.8E-42 278.4 39.4 277 18-302 27-316 (318)
43 3mkq_A Coatomer beta'-subunit; 100.0 9.2E-39 3.2E-43 318.5 38.6 292 6-302 3-303 (814)
44 4gga_A P55CDC, cell division c 100.0 2.8E-38 9.6E-43 292.3 38.9 278 18-303 107-397 (420)
45 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-40 1.3E-44 311.7 25.8 285 15-301 132-517 (524)
46 3gre_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 300.1 30.3 280 13-298 60-437 (437)
47 3bg1_A Protein SEC13 homolog; 100.0 6.5E-40 2.2E-44 291.9 24.5 250 11-300 8-292 (316)
48 3vl1_A 26S proteasome regulato 100.0 4.1E-39 1.4E-43 297.0 30.6 310 18-340 58-398 (420)
49 2oaj_A Protein SNI1; WD40 repe 100.0 8E-39 2.7E-43 321.5 34.3 204 12-221 13-246 (902)
50 1gxr_A ESG1, transducin-like e 100.0 5.6E-38 1.9E-42 280.1 35.8 304 14-340 7-319 (337)
51 4aez_A CDC20, WD repeat-contai 100.0 6.4E-38 2.2E-42 288.1 36.8 286 13-305 88-384 (401)
52 3v7d_B Cell division control p 100.0 1.1E-37 3.8E-42 291.5 38.6 283 10-306 115-426 (464)
53 4gqb_B Methylosome protein 50; 100.0 2.6E-38 8.8E-43 284.8 32.6 245 13-261 79-333 (344)
54 2pbi_B Guanine nucleotide-bind 100.0 2.4E-37 8.2E-42 279.7 38.4 273 52-341 55-340 (354)
55 4g56_B MGC81050 protein; prote 100.0 2.3E-38 7.9E-43 286.7 31.1 267 30-303 16-303 (357)
56 3vl1_A 26S proteasome regulato 100.0 1.9E-37 6.4E-42 285.9 37.5 279 19-301 100-419 (420)
57 3frx_A Guanine nucleotide-bind 100.0 1E-37 3.4E-42 278.1 33.9 243 12-260 61-318 (319)
58 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-37 6.2E-42 288.1 37.0 276 13-305 130-418 (435)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.3E-37 1.8E-41 285.6 40.1 306 6-340 108-420 (445)
60 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-37 4.1E-42 323.9 39.7 285 10-300 609-912 (1249)
61 3f3f_A Nucleoporin SEH1; struc 100.0 1E-37 3.6E-42 278.7 33.6 291 10-303 5-339 (351)
62 3mmy_A MRNA export factor; mRN 100.0 7.9E-37 2.7E-41 275.7 36.7 282 12-299 35-344 (368)
63 4h5i_A Guanine nucleotide-exch 100.0 6.8E-38 2.3E-42 284.5 29.2 276 16-301 14-343 (365)
64 1yfq_A Cell cycle arrest prote 100.0 3.2E-37 1.1E-41 276.2 32.2 276 12-299 7-322 (342)
65 1pgu_A Actin interacting prote 100.0 1.9E-36 6.4E-41 292.1 37.1 305 12-340 156-597 (615)
66 2xzm_R RACK1; ribosome, transl 100.0 1.5E-36 5.1E-41 273.2 33.1 244 11-261 71-342 (343)
67 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-36 6.3E-41 272.9 33.3 281 51-340 5-316 (345)
68 3sfz_A APAF-1, apoptotic pepti 100.0 4.9E-37 1.7E-41 319.3 33.4 287 13-305 837-1162(1249)
69 4ery_A WD repeat-containing pr 100.0 1.7E-35 5.6E-40 262.5 37.9 272 51-340 13-292 (312)
70 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-35 4.2E-40 276.4 37.8 274 11-302 154-443 (445)
71 3jrp_A Fusion protein of prote 100.0 2.4E-36 8.4E-41 273.8 31.1 247 11-301 6-287 (379)
72 1pgu_A Actin interacting prote 100.0 4.6E-36 1.6E-40 289.3 34.8 284 12-305 14-332 (615)
73 3gre_A Serine/threonine-protei 100.0 7.2E-37 2.5E-41 283.8 25.9 287 14-308 15-366 (437)
74 2hes_X YDR267CP; beta-propelle 100.0 4.8E-36 1.6E-40 268.5 29.9 243 14-259 56-328 (330)
75 2oaj_A Protein SNI1; WD40 repe 100.0 2.2E-35 7.4E-40 296.6 34.9 284 14-303 96-607 (902)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 4.7E-36 1.6E-40 275.6 27.2 277 19-302 37-343 (402)
77 3v7d_B Cell division control p 100.0 1.4E-34 4.6E-39 270.5 37.2 275 12-298 158-460 (464)
78 1erj_A Transcriptional repress 100.0 8.6E-35 2.9E-39 266.6 34.7 241 16-260 123-390 (393)
79 3i2n_A WD repeat-containing pr 100.0 1.3E-34 4.5E-39 260.4 33.3 287 55-341 12-335 (357)
80 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-34 7.8E-39 286.8 38.2 287 11-301 50-386 (814)
81 3dm0_A Maltose-binding peripla 100.0 7.1E-35 2.4E-39 286.1 33.5 242 11-258 425-692 (694)
82 4gq1_A NUP37; propeller, trans 100.0 1.4E-35 4.9E-40 271.8 24.1 248 29-299 99-387 (393)
83 2xyi_A Probable histone-bindin 100.0 3.2E-34 1.1E-38 265.9 33.2 259 12-301 124-410 (430)
84 4gga_A P55CDC, cell division c 100.0 1.6E-33 5.5E-38 260.4 36.9 262 10-277 141-413 (420)
85 2j04_A TAU60, YPL007P, hypothe 100.0 3E-35 1E-39 273.6 25.3 297 13-340 12-343 (588)
86 1sq9_A Antiviral protein SKI8; 100.0 2.8E-34 9.4E-39 262.5 29.9 283 53-340 8-367 (397)
87 3jro_A Fusion protein of prote 100.0 6.9E-35 2.4E-39 288.5 27.4 248 10-301 3-285 (753)
88 4aow_A Guanine nucleotide-bind 100.0 3.6E-33 1.2E-37 249.5 35.8 283 48-341 25-320 (340)
89 1yfq_A Cell cycle arrest prote 100.0 5.8E-34 2E-38 255.0 29.9 251 55-310 5-291 (342)
90 3ei3_B DNA damage-binding prot 100.0 1.3E-33 4.4E-38 257.4 31.1 254 46-305 58-343 (383)
91 3odt_A Protein DOA1; ubiquitin 100.0 9.6E-33 3.3E-37 243.7 35.5 244 51-305 8-259 (313)
92 3mmy_A MRNA export factor; mRN 100.0 5.7E-33 2E-37 250.4 34.7 278 46-341 24-329 (368)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-32 4E-37 256.8 36.8 279 16-301 4-391 (450)
94 2pm7_B Protein transport prote 100.0 6.1E-33 2.1E-37 244.7 32.5 220 55-302 3-239 (297)
95 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-34 1.5E-38 270.2 26.7 227 72-301 172-428 (524)
96 3k26_A Polycomb protein EED; W 100.0 1.5E-33 5.3E-38 254.1 29.1 272 56-340 13-348 (366)
97 1r5m_A SIR4-interacting protei 100.0 2.1E-33 7.3E-38 258.1 30.4 256 43-303 27-321 (425)
98 4aez_A CDC20, WD repeat-contai 100.0 7.9E-33 2.7E-37 254.1 33.9 246 14-266 132-387 (401)
99 3zwl_B Eukaryotic translation 100.0 1.7E-32 6E-37 247.3 34.3 247 54-305 25-308 (369)
100 3lrv_A PRE-mRNA-splicing facto 100.0 6.2E-34 2.1E-38 256.0 24.6 261 27-298 44-330 (343)
101 1l0q_A Surface layer protein; 100.0 5E-32 1.7E-36 247.3 36.9 270 31-305 2-279 (391)
102 3vu4_A KMHSV2; beta-propeller 100.0 3E-32 1E-36 246.4 33.0 274 12-301 15-336 (355)
103 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-32 5.9E-37 248.1 29.8 249 10-262 46-364 (372)
104 3dw8_B Serine/threonine-protei 100.0 1.1E-32 3.7E-37 255.9 28.6 243 59-305 26-377 (447)
105 3dwl_C Actin-related protein 2 100.0 1.6E-33 5.6E-38 255.9 22.4 241 57-300 7-280 (377)
106 3bws_A Protein LP49; two-domai 100.0 3.9E-31 1.3E-35 244.7 36.1 277 17-300 123-431 (433)
107 4ggc_A P55CDC, cell division c 100.0 1E-30 3.4E-35 231.4 36.0 246 10-261 61-317 (318)
108 2w18_A PALB2, fancn, partner a 100.0 1.6E-31 5.6E-36 234.4 26.1 262 33-299 56-355 (356)
109 1l0q_A Surface layer protein; 100.0 5.4E-30 1.9E-34 233.8 37.3 285 12-303 28-344 (391)
110 3bg1_A Protein SEC13 homolog; 100.0 4.1E-32 1.4E-36 241.5 22.6 222 56-301 8-247 (316)
111 4a11_B DNA excision repair pro 100.0 1E-30 3.5E-35 239.1 32.2 279 14-300 97-404 (408)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 2.2E-31 7.5E-36 244.4 27.7 245 12-262 77-345 (402)
113 4e54_B DNA damage-binding prot 100.0 1.4E-31 4.9E-36 248.4 26.5 246 12-262 160-433 (435)
114 2j04_A TAU60, YPL007P, hypothe 100.0 3.1E-31 1E-35 246.8 28.5 257 13-290 49-350 (588)
115 3bws_A Protein LP49; two-domai 100.0 2.9E-29 9.8E-34 232.1 37.2 285 38-341 96-414 (433)
116 1nir_A Nitrite reductase; hemo 100.0 8.3E-30 2.8E-34 242.5 34.1 306 29-341 147-492 (543)
117 3jrp_A Fusion protein of prote 100.0 2.3E-30 8E-35 234.4 28.1 224 51-302 1-241 (379)
118 4h5i_A Guanine nucleotide-exch 100.0 1.3E-30 4.4E-35 236.5 25.0 241 11-259 68-343 (365)
119 3vu4_A KMHSV2; beta-propeller 100.0 4.6E-30 1.6E-34 232.0 28.4 247 45-303 3-273 (355)
120 1p22_A F-BOX/WD-repeat protein 100.0 9E-30 3.1E-34 236.2 30.1 251 10-279 167-433 (435)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-29 1.6E-33 232.4 31.4 240 13-259 99-391 (450)
122 3f3f_A Nucleoporin SEH1; struc 100.0 9E-30 3.1E-34 227.1 23.7 260 55-340 5-319 (351)
123 4gq1_A NUP37; propeller, trans 100.0 4.8E-30 1.6E-34 235.1 20.8 289 18-341 17-373 (393)
124 3lrv_A PRE-mRNA-splicing facto 100.0 4.6E-30 1.6E-34 230.7 19.8 228 69-302 44-293 (343)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.7E-28 1.6E-32 223.4 27.8 268 27-300 70-386 (415)
126 2w18_A PALB2, fancn, partner a 100.0 3.5E-28 1.2E-32 213.4 23.0 174 39-215 155-355 (356)
127 3jro_A Fusion protein of prote 100.0 3.6E-28 1.2E-32 240.4 25.7 220 55-302 3-239 (753)
128 1nir_A Nitrite reductase; hemo 100.0 3.4E-26 1.1E-30 217.7 34.8 281 19-305 181-518 (543)
129 2xyi_A Probable histone-bindin 100.0 7.5E-27 2.6E-31 216.3 29.6 209 7-218 172-411 (430)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.4E-26 2.2E-30 209.1 29.6 268 10-283 111-410 (415)
131 3u4y_A Uncharacterized protein 99.9 1.7E-24 5.8E-29 192.8 33.5 270 30-303 9-306 (331)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-24 5E-29 214.1 31.0 277 16-301 36-413 (741)
133 2ojh_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 189.5 23.1 254 35-292 16-293 (297)
134 1ri6_A Putative isomerase YBHE 99.9 1.5E-23 5E-28 187.1 28.6 267 32-300 6-307 (343)
135 1xfd_A DIP, dipeptidyl aminope 99.9 3.6E-24 1.2E-28 210.7 27.0 277 18-301 18-393 (723)
136 1pby_B Quinohemoprotein amine 99.9 9.1E-24 3.1E-28 188.0 25.2 264 32-305 2-314 (337)
137 1k32_A Tricorn protease; prote 99.9 2.6E-23 9E-28 212.6 30.4 282 10-303 46-411 (1045)
138 3vgz_A Uncharacterized protein 99.9 2.6E-22 8.9E-27 179.9 32.4 268 16-291 40-334 (353)
139 2ecf_A Dipeptidyl peptidase IV 99.9 9E-23 3.1E-27 201.3 27.7 275 18-300 110-458 (741)
140 3u4y_A Uncharacterized protein 99.9 9.2E-22 3.1E-26 175.1 30.0 244 14-261 38-306 (331)
141 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-22 5.9E-27 198.3 27.3 277 17-303 82-437 (706)
142 1ri6_A Putative isomerase YBHE 99.9 1.1E-21 3.7E-26 174.9 29.9 264 13-282 34-334 (343)
143 1jmx_B Amine dehydrogenase; ox 99.9 3.9E-22 1.3E-26 178.4 25.6 262 29-305 9-329 (349)
144 3hfq_A Uncharacterized protein 99.9 2.7E-21 9.3E-26 173.4 30.8 260 39-300 14-316 (347)
145 2z3z_A Dipeptidyl aminopeptida 99.9 8E-22 2.7E-26 193.6 29.6 265 31-301 35-391 (706)
146 1k32_A Tricorn protease; prote 99.9 1.3E-21 4.4E-26 200.2 32.1 276 12-301 199-502 (1045)
147 3vgz_A Uncharacterized protein 99.9 5.6E-21 1.9E-25 171.2 30.8 241 61-303 40-305 (353)
148 3o4h_A Acylamino-acid-releasin 99.9 5.3E-22 1.8E-26 190.7 23.9 266 15-300 20-314 (582)
149 2ojh_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 167.7 23.7 223 77-303 16-260 (297)
150 1xfd_A DIP, dipeptidyl aminope 99.9 5.2E-21 1.8E-25 188.2 25.5 271 12-288 53-427 (723)
151 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-20 4E-25 174.8 25.0 197 15-218 35-279 (434)
152 3scy_A Hypothetical bacterial 99.9 3.3E-19 1.1E-23 160.8 32.9 267 30-300 12-336 (361)
153 1pby_B Quinohemoprotein amine 99.9 2.5E-20 8.4E-25 165.7 24.0 241 18-269 35-320 (337)
154 1z68_A Fibroblast activation p 99.9 8.5E-21 2.9E-25 186.7 22.0 273 21-301 20-391 (719)
155 3o4h_A Acylamino-acid-releasin 99.9 7.9E-21 2.7E-25 182.5 19.7 240 53-299 12-274 (582)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-20 4.1E-25 174.7 20.1 218 41-302 23-279 (434)
157 3hfq_A Uncharacterized protein 99.9 2.5E-19 8.4E-24 160.7 27.4 246 13-263 36-323 (347)
158 2oiz_A Aromatic amine dehydrog 99.9 2E-19 7E-24 162.5 26.9 291 29-340 13-360 (361)
159 3scy_A Hypothetical bacterial 99.9 3.3E-18 1.1E-22 154.2 32.9 259 15-279 48-360 (361)
160 3pe7_A Oligogalacturonate lyas 99.9 3.9E-19 1.3E-23 161.6 26.1 271 27-301 43-382 (388)
161 3fvz_A Peptidyl-glycine alpha- 99.8 1.3E-17 4.4E-22 148.7 32.1 246 16-301 23-322 (329)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-18 5.7E-23 156.7 25.6 267 34-302 5-342 (365)
163 1z68_A Fibroblast activation p 99.8 5E-19 1.7E-23 174.1 20.8 276 18-303 61-445 (719)
164 1q7f_A NHL, brain tumor CG1071 99.8 5.8E-17 2E-21 141.2 31.1 235 14-301 27-280 (286)
165 4a5s_A Dipeptidyl peptidase 4 99.8 5.9E-18 2E-22 167.1 27.6 275 16-299 16-396 (740)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.9E-22 150.5 25.1 241 15-260 38-342 (365)
167 3c5m_A Oligogalacturonate lyas 99.8 5.8E-18 2E-22 154.0 21.4 274 18-299 37-380 (396)
168 1jmx_B Amine dehydrogenase; ox 99.8 3E-17 1E-21 146.5 25.6 243 18-268 44-334 (349)
169 3azo_A Aminopeptidase; POP fam 99.8 4.4E-17 1.5E-21 158.7 28.2 286 12-303 19-371 (662)
170 2dg1_A DRP35, lactonase; beta 99.8 1.3E-16 4.4E-21 142.0 28.0 266 17-291 6-300 (333)
171 3dsm_A Uncharacterized protein 99.8 2.2E-16 7.5E-21 140.7 27.8 256 39-300 15-301 (328)
172 1qks_A Cytochrome CD1 nitrite 99.8 4.6E-15 1.6E-19 141.1 34.5 272 30-302 166-478 (567)
173 3azo_A Aminopeptidase; POP fam 99.7 2.3E-16 7.7E-21 153.6 23.3 271 28-301 87-411 (662)
174 4a5s_A Dipeptidyl peptidase 4 99.7 1.2E-15 4.2E-20 150.5 27.7 287 12-301 52-449 (740)
175 2oiz_A Aromatic amine dehydrog 99.7 1.3E-15 4.4E-20 137.5 25.4 259 14-283 49-360 (361)
176 2gop_A Trilobed protease; beta 99.7 4.9E-15 1.7E-19 132.4 27.7 256 17-300 15-330 (347)
177 2z2n_A Virginiamycin B lyase; 99.7 5E-13 1.7E-17 116.3 38.1 274 13-300 11-294 (299)
178 3pe7_A Oligogalacturonate lyas 99.7 1.4E-15 4.6E-20 138.1 22.1 239 13-257 77-380 (388)
179 2bkl_A Prolyl endopeptidase; m 99.7 2.1E-15 7.2E-20 147.8 24.7 271 29-303 77-399 (695)
180 3e5z_A Putative gluconolactona 99.7 2.6E-14 8.7E-19 125.1 28.0 238 13-262 24-289 (296)
181 2xdw_A Prolyl endopeptidase; a 99.7 9.6E-15 3.3E-19 143.5 27.7 244 14-303 122-416 (710)
182 3no2_A Uncharacterized protein 99.7 2.4E-14 8.1E-19 124.2 26.1 189 30-224 4-202 (276)
183 1qks_A Cytochrome CD1 nitrite 99.7 1.9E-13 6.4E-18 130.0 34.2 283 18-304 198-541 (567)
184 1rwi_B Serine/threonine-protei 99.7 5.9E-14 2E-18 120.8 27.3 239 18-304 25-267 (270)
185 3dsm_A Uncharacterized protein 99.7 4.7E-14 1.6E-18 125.5 27.0 239 18-267 45-309 (328)
186 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-13 3.7E-18 123.2 28.3 215 61-305 23-281 (329)
187 3e5z_A Putative gluconolactona 99.7 1.5E-13 5.1E-18 120.2 28.7 232 53-292 19-278 (296)
188 3c5m_A Oligogalacturonate lyas 99.7 2.2E-15 7.4E-20 136.9 16.8 254 45-303 14-331 (396)
189 2mad_H Methylamine dehydrogena 99.7 1.1E-12 3.6E-17 118.8 34.3 269 29-306 30-355 (373)
190 2dg1_A DRP35, lactonase; beta 99.7 6.9E-13 2.4E-17 117.8 32.3 229 12-247 40-298 (333)
191 3sjl_D Methylamine dehydrogena 99.6 1E-13 3.6E-18 124.4 26.3 269 29-305 42-367 (386)
192 1q7f_A NHL, brain tumor CG1071 99.6 1.5E-13 5.1E-18 119.4 25.7 196 14-217 74-280 (286)
193 2qc5_A Streptogramin B lactona 99.6 1.4E-11 4.7E-16 107.2 37.2 271 14-298 17-297 (300)
194 2bkl_A Prolyl endopeptidase; m 99.6 3.8E-14 1.3E-18 138.9 23.1 238 14-262 118-400 (695)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.3E-12 4.3E-17 114.9 28.7 239 14-301 15-299 (314)
196 1yr2_A Prolyl oligopeptidase; 99.6 5.3E-13 1.8E-17 131.7 28.3 273 29-303 116-443 (741)
197 2gop_A Trilobed protease; beta 99.6 7.5E-13 2.6E-17 118.1 23.0 231 18-270 60-340 (347)
198 2z2n_A Virginiamycin B lyase; 99.5 8.4E-11 2.9E-15 102.1 33.7 235 57-299 10-253 (299)
199 2xdw_A Prolyl endopeptidase; a 99.5 3.1E-12 1.1E-16 125.6 24.8 232 29-299 81-366 (710)
200 3hrp_A Uncharacterized protein 99.5 2.5E-11 8.4E-16 111.2 29.1 249 17-299 131-408 (409)
201 3c75_H MADH, methylamine dehyd 99.5 7.2E-12 2.5E-16 114.4 23.5 270 29-306 82-407 (426)
202 3sjl_D Methylamine dehydrogena 99.4 2.5E-11 8.5E-16 109.0 22.5 251 22-281 83-384 (386)
203 1yr2_A Prolyl oligopeptidase; 99.4 1.3E-11 4.6E-16 121.7 22.8 243 13-262 159-444 (741)
204 2qc5_A Streptogramin B lactona 99.4 2.1E-09 7.1E-14 93.3 33.9 234 58-299 16-258 (300)
205 1xip_A Nucleoporin NUP159; bet 99.4 8.6E-12 2.9E-16 112.4 18.4 144 63-219 39-193 (388)
206 2mad_H Methylamine dehydrogena 99.4 1.1E-09 3.7E-14 98.9 32.3 236 21-266 70-357 (373)
207 1mda_H Methylamine dehydrogena 99.4 1.5E-11 5.1E-16 110.4 18.5 260 31-305 32-350 (368)
208 1rwi_B Serine/threonine-protei 99.4 9.4E-11 3.2E-15 100.5 22.7 199 15-219 65-266 (270)
209 3no2_A Uncharacterized protein 99.4 4.8E-11 1.6E-15 103.3 20.7 192 72-304 4-198 (276)
210 3iuj_A Prolyl endopeptidase; h 99.4 1.6E-10 5.3E-15 113.2 26.7 241 58-303 125-407 (693)
211 3iuj_A Prolyl endopeptidase; h 99.4 1.3E-10 4.4E-15 113.7 25.4 240 13-262 125-408 (693)
212 3g4e_A Regucalcin; six bladed 99.4 8.6E-10 3E-14 96.3 27.6 221 64-289 15-261 (297)
213 1xip_A Nucleoporin NUP159; bet 99.4 1.7E-11 6E-16 110.4 17.0 170 18-205 39-231 (388)
214 2qe8_A Uncharacterized protein 99.4 1.8E-10 6.3E-15 102.9 22.9 263 17-298 17-318 (343)
215 3g4e_A Regucalcin; six bladed 99.3 3.1E-09 1.1E-13 92.8 29.1 221 20-247 16-261 (297)
216 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.3E-09 4.3E-14 98.5 26.8 263 31-305 53-341 (376)
217 1kb0_A Quinohemoprotein alcoho 99.3 2.9E-10 1E-14 110.7 24.0 254 31-286 128-535 (677)
218 2ghs_A AGR_C_1268P; regucalcin 99.3 2.2E-09 7.7E-14 95.1 27.6 219 65-291 52-293 (326)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.3 4.2E-09 1.4E-13 95.0 29.3 254 31-298 103-375 (376)
220 3dr2_A Exported gluconolactona 99.3 1.9E-09 6.5E-14 94.5 25.4 232 55-296 38-302 (305)
221 3dr2_A Exported gluconolactona 99.3 2.4E-09 8.1E-14 93.9 25.6 223 16-250 44-298 (305)
222 1yiq_A Quinohemoprotein alcoho 99.3 1.5E-09 5.2E-14 105.8 26.5 253 31-285 121-532 (689)
223 2hz6_A Endoplasmic reticulum t 99.3 3.8E-12 1.3E-16 115.0 6.3 255 30-300 8-278 (369)
224 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.3E-09 7.8E-14 93.9 23.4 196 15-217 69-299 (314)
225 3c75_H MADH, methylamine dehyd 99.2 1.5E-09 5.2E-14 99.0 21.4 239 21-266 122-409 (426)
226 2ghs_A AGR_C_1268P; regucalcin 99.2 4E-08 1.4E-12 86.9 29.5 205 20-236 52-279 (326)
227 3hrp_A Uncharacterized protein 99.2 5.3E-09 1.8E-13 95.7 24.4 193 104-302 132-355 (409)
228 2hz6_A Endoplasmic reticulum t 99.2 3.3E-11 1.1E-15 108.9 8.0 204 72-283 8-216 (369)
229 1yiq_A Quinohemoprotein alcoho 99.2 3.4E-09 1.2E-13 103.3 22.7 270 31-306 70-510 (689)
230 1kb0_A Quinohemoprotein alcoho 99.2 4.1E-09 1.4E-13 102.6 22.0 269 32-306 78-512 (677)
231 1npe_A Nidogen, entactin; glyc 99.1 4.7E-07 1.6E-11 77.5 31.6 246 33-283 3-263 (267)
232 3hxj_A Pyrrolo-quinoline quino 99.1 7.6E-09 2.6E-13 91.2 20.3 253 30-301 70-324 (330)
233 2iwa_A Glutamine cyclotransfer 99.1 4.2E-08 1.4E-12 83.5 22.7 202 95-302 11-238 (266)
234 1mda_H Methylamine dehydrogena 99.1 6.6E-09 2.3E-13 93.2 17.4 244 21-280 69-366 (368)
235 1fwx_A Nitrous oxide reductase 99.0 1.4E-08 4.9E-13 95.1 16.8 248 20-289 90-406 (595)
236 3hxj_A Pyrrolo-quinoline quino 99.0 2.4E-08 8.1E-13 88.0 17.4 250 30-299 30-282 (330)
237 2ad6_A Methanol dehydrogenase 99.0 1.9E-07 6.4E-12 89.1 24.7 252 31-286 115-522 (571)
238 2iwa_A Glutamine cyclotransfer 99.0 3.5E-07 1.2E-11 77.9 23.2 193 17-217 21-237 (266)
239 1kv9_A Type II quinohemoprotei 98.9 1.5E-07 5.1E-12 91.5 22.5 271 32-306 67-493 (668)
240 1kv9_A Type II quinohemoprotei 98.9 7.5E-07 2.6E-11 86.5 26.3 255 31-287 117-518 (668)
241 3nol_A Glutamine cyclotransfer 98.9 6.6E-07 2.3E-11 75.4 22.3 189 96-289 34-243 (262)
242 2qe8_A Uncharacterized protein 98.9 1.1E-07 3.7E-12 84.8 18.6 188 14-206 64-309 (343)
243 1npe_A Nidogen, entactin; glyc 98.9 9.3E-06 3.2E-10 69.3 30.0 204 18-225 37-246 (267)
244 4a2l_A BT_4663, two-component 98.9 1.9E-05 6.5E-10 78.3 35.7 272 19-301 175-480 (795)
245 2ece_A 462AA long hypothetical 98.9 1.5E-06 5.3E-11 78.8 25.0 232 29-289 93-399 (462)
246 4a2l_A BT_4663, two-component 98.9 4.2E-05 1.4E-09 75.8 37.3 272 16-301 214-526 (795)
247 1w6s_A Methanol dehydrogenase 98.8 1E-06 3.6E-11 84.1 24.2 249 34-284 124-529 (599)
248 2p4o_A Hypothetical protein; p 98.8 2.3E-05 8E-10 68.3 31.0 233 51-290 22-277 (306)
249 3mbr_X Glutamine cyclotransfer 98.8 4.1E-06 1.4E-10 69.9 23.9 189 96-289 12-223 (243)
250 3nok_A Glutaminyl cyclase; bet 98.8 1.4E-06 4.9E-11 73.4 20.8 188 96-289 46-254 (268)
251 3nol_A Glutamine cyclotransfer 98.8 1.8E-06 6.3E-11 72.7 21.2 183 14-205 40-243 (262)
252 2ad6_A Methanol dehydrogenase 98.8 2.1E-06 7.1E-11 81.8 24.4 268 33-306 64-499 (571)
253 1fwx_A Nitrous oxide reductase 98.8 1.1E-06 3.9E-11 82.3 21.7 189 112-301 99-361 (595)
254 1flg_A Protein (quinoprotein e 98.8 9.2E-06 3.1E-10 77.5 28.5 254 31-285 117-543 (582)
255 2fp8_A Strictosidine synthase; 98.8 4E-06 1.4E-10 73.7 24.4 235 13-258 15-312 (322)
256 2fp8_A Strictosidine synthase; 98.8 5E-06 1.7E-10 73.1 24.4 230 65-300 22-312 (322)
257 1k3i_A Galactose oxidase precu 98.7 7.4E-07 2.5E-11 86.5 20.3 258 30-290 197-530 (656)
258 3nok_A Glutaminyl cyclase; bet 98.7 2.7E-06 9.2E-11 71.7 20.7 179 16-205 54-253 (268)
259 3mbr_X Glutamine cyclotransfer 98.7 1.5E-05 5.3E-10 66.4 23.1 181 16-205 20-222 (243)
260 2ece_A 462AA long hypothetical 98.6 3.4E-06 1.2E-10 76.6 19.2 177 29-206 147-399 (462)
261 3v9f_A Two-component system se 98.6 0.00052 1.8E-08 67.8 35.9 275 17-302 258-569 (781)
262 1w6s_A Methanol dehydrogenase 98.6 2.7E-05 9.2E-10 74.3 25.4 190 33-225 64-350 (599)
263 1flg_A Protein (quinoprotein e 98.6 2E-05 7E-10 75.1 24.4 273 30-307 68-522 (582)
264 3v9f_A Two-component system se 98.5 0.0005 1.7E-08 68.0 33.9 271 17-300 211-523 (781)
265 3v65_B Low-density lipoprotein 98.5 0.0005 1.7E-08 62.0 30.1 224 40-267 95-326 (386)
266 3v65_B Low-density lipoprotein 98.5 0.00043 1.5E-08 62.4 29.6 230 66-299 81-316 (386)
267 1k3i_A Galactose oxidase precu 98.4 4.3E-05 1.5E-09 74.1 22.5 234 66-300 190-496 (656)
268 3v64_C Agrin; beta propeller, 98.4 0.00085 2.9E-08 59.6 32.9 232 30-267 44-283 (349)
269 3tc9_A Hypothetical hydrolase; 98.4 0.00017 5.7E-09 66.2 24.6 232 65-299 140-428 (430)
270 3v64_C Agrin; beta propeller, 98.4 0.001 3.4E-08 59.1 32.3 230 66-299 38-273 (349)
271 2xe4_A Oligopeptidase B; hydro 98.4 5.9E-05 2E-09 74.3 22.7 237 18-261 175-460 (751)
272 3qqz_A Putative uncharacterize 98.4 0.00072 2.5E-08 57.0 26.3 196 13-214 23-250 (255)
273 4hw6_A Hypothetical protein, I 98.4 0.00038 1.3E-08 63.8 26.2 232 64-299 141-431 (433)
274 3p5b_L Low density lipoprotein 98.3 0.0017 5.7E-08 58.8 31.9 240 33-277 85-338 (400)
275 4hw6_A Hypothetical protein, I 98.3 0.0009 3.1E-08 61.3 27.7 197 17-215 139-372 (433)
276 2p4o_A Hypothetical protein; p 98.3 0.00067 2.3E-08 58.9 25.1 192 18-216 33-241 (306)
277 1ijq_A LDL receptor, low-densi 98.3 0.0016 5.5E-08 56.9 30.1 221 41-266 10-245 (316)
278 3p5b_L Low density lipoprotein 98.3 0.0022 7.5E-08 58.1 30.9 220 81-301 90-320 (400)
279 1ijq_A LDL receptor, low-densi 98.2 0.002 6.8E-08 56.3 30.3 218 82-301 9-238 (316)
280 3sov_A LRP-6, low-density lipo 98.2 0.0022 7.4E-08 56.1 29.4 227 73-302 5-239 (318)
281 3m0c_C LDL receptor, low-densi 98.2 0.0035 1.2E-07 61.7 30.8 223 40-266 403-639 (791)
282 3kya_A Putative phosphatase; s 98.2 0.0019 6.5E-08 59.8 26.2 236 64-302 141-476 (496)
283 2xe4_A Oligopeptidase B; hydro 98.2 0.00048 1.6E-08 67.8 23.3 199 58-257 169-398 (751)
284 3amr_A 3-phytase; beta-propell 98.1 0.0016 5.4E-08 57.2 22.1 200 21-225 30-272 (355)
285 3m0c_C LDL receptor, low-densi 98.0 0.014 4.8E-07 57.4 31.4 230 68-300 391-631 (791)
286 3amr_A 3-phytase; beta-propell 98.0 0.002 6.9E-08 56.5 21.5 192 73-266 40-271 (355)
287 3sov_A LRP-6, low-density lipo 98.0 0.0069 2.4E-07 52.9 26.1 205 18-225 36-246 (318)
288 3qqz_A Putative uncharacterize 98.0 0.0061 2.1E-07 51.3 23.5 192 103-298 27-250 (255)
289 4a0p_A LRP6, LRP-6, low-densit 97.9 0.018 6.1E-07 55.3 32.8 221 39-262 13-240 (628)
290 2xbg_A YCF48-like protein; pho 97.9 0.0098 3.3E-07 52.1 28.1 229 16-256 79-319 (327)
291 3tc9_A Hypothetical hydrolase; 97.9 0.0011 3.7E-08 60.7 18.8 153 147-301 138-301 (430)
292 2vpj_A Kelch-like protein 12; 97.9 0.0029 1E-07 54.5 20.4 225 30-260 14-279 (301)
293 2xbg_A YCF48-like protein; pho 97.9 0.012 4.1E-07 51.5 32.2 267 16-298 35-319 (327)
294 1n7d_A LDL receptor, low-densi 97.8 0.00051 1.7E-08 67.0 16.1 204 19-225 408-622 (699)
295 4a0p_A LRP6, LRP-6, low-densit 97.8 0.03 1E-06 53.7 30.8 224 73-301 7-237 (628)
296 1n7d_A LDL receptor, low-densi 97.7 0.00069 2.4E-08 66.0 15.7 218 82-300 385-613 (699)
297 2xn4_A Kelch-like protein 2; s 97.7 0.0048 1.6E-07 53.2 18.7 225 30-260 15-277 (302)
298 3s94_A LRP-6, low-density lipo 97.6 0.033 1.1E-06 53.4 25.5 221 81-302 16-244 (619)
299 3ii7_A Kelch-like protein 7; p 97.6 0.0094 3.2E-07 51.4 19.9 224 31-260 12-273 (306)
300 3ei3_A DNA damage-binding prot 97.6 0.086 2.9E-06 54.2 33.5 280 16-303 553-915 (1158)
301 3kya_A Putative phosphatase; s 97.6 0.0069 2.4E-07 56.0 19.1 154 147-300 140-340 (496)
302 2vpj_A Kelch-like protein 12; 97.6 0.012 4E-07 50.6 19.9 211 83-299 31-276 (301)
303 2ism_A Putative oxidoreductase 97.5 0.026 8.9E-07 50.0 21.5 218 64-288 33-332 (352)
304 1zgk_A Kelch-like ECH-associat 97.5 0.011 3.8E-07 51.1 18.3 224 30-260 24-288 (308)
305 4asc_A Kelch repeat and BTB do 97.4 0.026 8.9E-07 48.9 19.5 210 33-249 7-253 (315)
306 3s94_A LRP-6, low-density lipo 97.4 0.11 3.8E-06 49.7 32.3 157 18-177 41-202 (619)
307 2xn4_A Kelch-like protein 2; s 97.4 0.027 9.3E-07 48.4 19.3 184 113-301 61-276 (302)
308 3ii7_A Kelch-like protein 7; p 97.2 0.039 1.3E-06 47.5 18.7 222 74-301 13-272 (306)
309 2woz_A Kelch repeat and BTB do 97.2 0.066 2.3E-06 46.3 20.0 209 33-249 18-263 (318)
310 2p9w_A MAL S 1 allergenic prot 97.2 0.046 1.6E-06 47.5 18.0 153 149-303 16-217 (334)
311 1zgk_A Kelch-like ECH-associat 97.0 0.055 1.9E-06 46.6 17.5 181 113-299 70-285 (308)
312 3a9g_A Putative uncharacterize 96.9 0.19 6.5E-06 44.4 24.9 223 63-289 30-330 (354)
313 4asc_A Kelch repeat and BTB do 96.9 0.096 3.3E-06 45.2 17.8 207 76-291 8-253 (315)
314 2be1_A Serine/threonine-protei 96.8 0.031 1E-06 49.1 13.8 189 32-222 11-236 (339)
315 2p9w_A MAL S 1 allergenic prot 96.7 0.27 9.3E-06 42.7 23.5 158 18-178 14-216 (334)
316 2woz_A Kelch repeat and BTB do 96.6 0.24 8.2E-06 42.7 18.3 204 84-291 25-263 (318)
317 3ei3_A DNA damage-binding prot 96.6 0.87 3E-05 46.9 32.4 268 18-289 460-755 (1158)
318 2uvk_A YJHT; unknown function, 96.4 0.22 7.7E-06 43.6 17.4 91 30-123 19-128 (357)
319 3sre_A PON1, serum paraoxonase 96.3 0.52 1.8E-05 41.5 20.4 183 106-291 53-287 (355)
320 2xzh_A Clathrin heavy chain 1; 96.2 0.53 1.8E-05 40.8 28.0 249 42-301 50-332 (365)
321 3pbp_A Nucleoporin NUP82; beta 96.1 0.66 2.3E-05 41.7 18.3 139 156-297 31-208 (452)
322 2uvk_A YJHT; unknown function, 96.1 0.31 1.1E-05 42.7 16.5 135 168-305 168-346 (357)
323 3sre_A PON1, serum paraoxonase 95.8 0.94 3.2E-05 39.9 21.3 179 66-247 54-285 (355)
324 2ism_A Putative oxidoreductase 95.8 0.93 3.2E-05 39.8 23.8 98 18-121 32-153 (352)
325 1bpo_A Protein (clathrin); cla 95.5 1.4 4.7E-05 39.9 30.5 229 67-301 71-331 (494)
326 1xi4_A Clathrin heavy chain; a 95.3 2.1 7.2E-05 44.6 20.4 227 68-300 72-330 (1630)
327 2zwa_A Leucine carboxyl methyl 95.0 1.5 5.2E-05 42.4 18.1 191 30-220 397-638 (695)
328 1tl2_A L10, protein (tachylect 95.0 1 3.5E-05 36.7 13.9 137 62-205 41-199 (236)
329 3pbp_A Nucleoporin NUP82; beta 94.9 2.1 7.2E-05 38.5 20.3 107 104-212 67-207 (452)
330 1tl2_A L10, protein (tachylect 94.9 1.3 4.5E-05 36.1 14.3 101 17-127 41-157 (236)
331 3das_A Putative oxidoreductase 94.8 1.9 6.6E-05 37.7 26.6 221 62-288 32-325 (347)
332 2g8s_A Glucose/sorbosone dehyd 94.5 2.3 8E-05 37.2 27.7 55 239-293 288-346 (353)
333 2zwa_A Leucine carboxyl methyl 94.2 4.3 0.00015 39.2 19.7 189 71-261 396-637 (695)
334 1cru_A Protein (soluble quinop 93.5 4.3 0.00015 37.0 19.2 110 8-121 19-162 (454)
335 2g8s_A Glucose/sorbosone dehyd 93.2 3.7 0.00013 35.9 15.5 102 104-205 19-147 (353)
336 2be1_A Serine/threonine-protei 92.8 0.3 1E-05 42.7 7.5 108 160-267 12-138 (339)
337 3sbq_A Nitrous-oxide reductase 92.2 1.5 5.2E-05 40.9 11.4 106 99-205 319-452 (638)
338 3a9g_A Putative uncharacterize 92.0 5.8 0.0002 34.7 26.6 195 17-217 29-296 (354)
339 3ott_A Two-component system se 92.0 9.4 0.00032 37.1 32.6 266 19-300 193-501 (758)
340 1cru_A Protein (soluble quinop 90.4 10 0.00035 34.5 30.3 58 63-120 28-97 (454)
341 4gq2_M Nucleoporin NUP120; bet 88.4 17 0.00057 36.6 16.5 37 63-99 237-273 (950)
342 3ott_A Two-component system se 83.0 35 0.0012 33.0 35.4 269 18-300 233-544 (758)
343 3qhy_B Beta-lactamase inhibito 81.3 23 0.00079 29.7 21.5 223 63-304 25-249 (282)
344 1bpo_A Protein (clathrin); cla 72.7 56 0.0019 29.7 26.9 191 30-227 76-299 (494)
345 3f7f_A Nucleoporin NUP120; nuc 67.9 36 0.0012 32.9 10.3 30 71-100 229-258 (729)
346 3sbq_A Nitrous-oxide reductase 63.7 98 0.0034 29.1 21.0 75 226-301 321-408 (638)
347 2xzh_A Clathrin heavy chain 1; 63.1 76 0.0026 27.6 27.9 191 30-227 77-300 (365)
348 4fhn_B Nucleoporin NUP120; pro 61.2 20 0.0007 36.8 7.9 36 64-99 240-275 (1139)
349 1xi4_A Clathrin heavy chain; a 59.5 1.8E+02 0.0063 30.8 18.9 187 30-223 76-295 (1630)
350 4hvt_A Ritya.17583.B, post-pro 56.1 1.5E+02 0.005 28.6 20.9 227 27-258 137-429 (711)
351 4gq2_M Nucleoporin NUP120; bet 55.1 13 0.00044 37.4 5.1 29 29-57 245-273 (950)
352 3das_A Putative oxidoreductase 55.1 1E+02 0.0036 26.6 27.3 103 16-121 31-158 (347)
353 2wg3_C Hedgehog-interacting pr 51.3 1.4E+02 0.0048 27.0 14.1 106 103-208 14-159 (463)
354 3f7f_A Nucleoporin NUP120; nuc 49.4 19 0.00066 34.6 5.0 29 30-58 230-258 (729)
355 4fhn_B Nucleoporin NUP120; pro 45.7 14 0.00049 37.9 3.8 29 29-57 247-275 (1139)
356 3qhy_B Beta-lactamase inhibito 38.2 1.7E+02 0.0058 24.2 24.4 181 18-218 25-208 (282)
357 4hvt_A Ritya.17583.B, post-pro 38.0 2.8E+02 0.0096 26.7 19.7 230 69-300 137-429 (711)
358 4a9v_A PHOX; hydrolase, beta-p 36.0 1.5E+02 0.0052 27.7 8.6 59 63-121 477-549 (592)
359 3q6k_A 43.2 kDa salivary prote 32.7 2.5E+02 0.0087 24.6 21.9 163 42-205 124-341 (381)
360 3b7f_A Glycosyl hydrolase, BNR 32.2 2.4E+02 0.0084 24.2 24.8 263 33-296 24-367 (394)
361 3zwu_A Alkaline phosphatase PH 28.2 2E+02 0.0067 27.1 8.2 55 21-78 480-547 (592)
362 3uc1_A DNA gyrase subunit A; D 26.5 3E+02 0.01 23.4 18.9 103 30-133 108-228 (327)
363 3zwu_A Alkaline phosphatase PH 23.2 2E+02 0.0068 27.0 7.2 59 105-163 478-548 (592)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-47 Score=353.82 Aligned_cols=283 Identities=22% Similarity=0.354 Sum_probs=250.5
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.+.||.++|++++|+| ++.+|++|+.|++|+|||..++++..++.+|.+.|.+++|++++.++++|+.|++|++||+
T Consensus 103 ~l~gh~~~V~~~~~~p---~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHP---VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp EEECCSSCEEEEEECS---SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eecccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 3579999999999997 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 91 LTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 91 ~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
.+++....+ .|...|.+++|+|++.+|++|+.|++|++||+.++.. ......|...+.++.+.+ ++.++++|+.|++
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQ-DGTLIASCSNDQT 257 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECC-CCCEEEEEcCCCe
Confidence 988877766 5889999999999999999999999999999987653 334567888899998864 6678899999999
Q ss_pred EEEEECCCCceeEeecC-CCCeEEEEEecC--------------------CcEEE-EEcCCcEEEEECCCcceeeeeecC
Q 018784 170 VRLWDARSGKIVQTLET-KSPVTSAEVSRD--------------------GRYIT-TADGSSVKFWDANHFGLVKGYNMP 227 (350)
Q Consensus 170 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~--------------------~~~l~-~~~~~~i~vwd~~~~~~~~~~~~~ 227 (350)
|++||++++++...+.. ...+.+++|+|+ +.+++ ++.|+.|++||+++..++..+..+
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 99999999998888764 567999999986 44555 456899999999999888877765
Q ss_pred CCCc-eeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 228 CNTE-SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 228 ~~~~-~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
.... .+.+.+ ++++|++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|++||.|++|++|++
T Consensus 338 ~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 338 DNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 5543 445554 6899999999999999999999999999999999999999999999999999999999986
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-47 Score=335.64 Aligned_cols=290 Identities=19% Similarity=0.237 Sum_probs=250.4
Q ss_pred ccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeE
Q 018784 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (350)
Q Consensus 6 ~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v 85 (350)
+.....++||.++|.+++|+| +|.+|++|+.|++|+|||.++++.+..+.+|...|.+++|++++.++++|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp---~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred ceeEEeecCCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 445556799999999999997 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 86 KLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 86 ~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
++||+.+++....+ .|...|.+++|+|++.+|++|+.|++|++||+.+..........|...|.+++|+|.++.++++|
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 99999999887776 58999999999999999999999999999999765444455667889999999998788899999
Q ss_pred eCCCeEEEEECCCCceeEeec--CCCCeEEEEEec--CCcEEE-EEcCCcEEEEECCCcceeeeeecCCCCce-eEecCC
Q 018784 165 TDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSR--DGRYIT-TADGSSVKFWDANHFGLVKGYNMPCNTES-ASLEPK 238 (350)
Q Consensus 165 ~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (350)
+.|++|++||++++.....+. +...+..+.+.| ++.+++ ++.|+.|++||+++..++..+..+..... +.+.|
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p- 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP- 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-
Confidence 999999999998887665554 346788888886 666665 45689999999999988888876655443 44554
Q ss_pred CCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC--EEEEecCCCcEEEecCC
Q 018784 239 LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE--SYASGSEDGTIRIWQTN 300 (350)
Q Consensus 239 ~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~--~lasgs~Dg~v~vw~~~ 300 (350)
++.+|++|+.|++|++||+.+++.+..+..|...+++++|+|++. ++++|+.|| +.+|++.
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 578999999999999999999999999999999999999999875 578887665 6666654
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-46 Score=335.67 Aligned_cols=285 Identities=23% Similarity=0.297 Sum_probs=245.1
Q ss_pred eccCCceeEEEeccc-CCCccEEEEEeCCCCeeEeeCCCCce--eeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 13 HGHSRPVVDLFYSPI-TPDGFFLVSASKDSSPMLRNGETGDW--IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~-s~dg~~lasgs~d~~v~iw~~~~~~~--~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
++|.++|++++|+|- .+++.+|+|||.|++|+||+..+++. ...+.+|...|.++++++++.+++|++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 699999999999873 23578999999999999999876653 457899999999999999999999999999999999
Q ss_pred CCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCC
Q 018784 90 ALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (350)
Q Consensus 90 ~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 168 (350)
+.+++....+ .|...+.+++|+|++++|++|+.|+.|++|++..+... .....+...+.+++|++ ++.++++|+.|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~-~~~~~~~~~v~~~~~sp-dg~~lasg~~dg 186 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSP-DGKYLASGAIDG 186 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE-EEEECSSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee-EEecCCCceEEEEEECC-CCCEEEEEcCCC
Confidence 9998877766 46778999999999999999999999999999865433 33455677899999986 566888999999
Q ss_pred eEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEE
Q 018784 169 GVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIA 245 (350)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s 245 (350)
+|++||+++++.+..+.. ..++.+++|+|++++|+++ .|+.|++||+++......+..+... ..+.+.| ++.+|++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s 265 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVS 265 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEE
Confidence 999999999999888875 4689999999999988765 5789999999988887776655443 3455655 5889999
Q ss_pred ecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 246 GGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 246 g~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
|+.|++|++||+.+++++..+.+|...|++++|+|++++|++++.|+.|++||++
T Consensus 266 ~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 266 SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999963
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.6e-46 Score=334.99 Aligned_cols=281 Identities=20% Similarity=0.377 Sum_probs=245.4
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.++||.++|++++|+| |+++|++|+.|++|+|||..+++.+..+..|...|.+++|+|++.++++|+.|+.|++|++
T Consensus 50 ~l~gH~~~v~~~~~s~---d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 50 TLRGHLAKIYAMHWGT---DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred eecCCCCceEEEEECC---CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 4689999999999986 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCe----eee-eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 91 LTGDE----KHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 91 ~~~~~----~~~-~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
.+... ... ..|...|.++.|++++. +++++.|++|++||+.++.. ......|.+.|.+++|.+ ++.++++|+
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~sg~ 203 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQ-TTTFTGHTGDVMSLSLAP-DTRLFVSGA 203 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcE-EEEEcCCCCceEEEEECC-CCCEEEEEe
Confidence 76542 222 35889999999998875 88999999999999986543 334566888999999986 566888999
Q ss_pred CCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCC---CCceeEecCCCC
Q 018784 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC---NTESASLEPKLG 240 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~ 240 (350)
.|++|++||+++++++..+.. ..++.+++|+|++++++++ .|+.|++||+++...+..+..+. ....+.+.+ ++
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g 282 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SG 282 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CC
Confidence 999999999999998888875 5689999999999887655 68999999999887776655432 234455655 68
Q ss_pred cEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 241 NIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 241 ~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|++.+|+|||.|+.|+|||
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999999999999999999999999999996
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.6e-45 Score=333.32 Aligned_cols=284 Identities=22% Similarity=0.320 Sum_probs=246.5
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
..++||.++|++++|+| ++++|||||.|++|+|||..+++....+..|...|.+++|+|++.++++|+.|+.+++|+
T Consensus 58 ~~l~gH~~~V~~~~~s~---d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCK---DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEecCCCCeEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34689999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-------eeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCC-CCcEE
Q 018784 90 ALTGD-------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTIL 161 (350)
Q Consensus 90 ~~~~~-------~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~ 161 (350)
+.... ......|...|.+++|+|++..|++++.|++|++||+.++.. ......|...+.++++.+. ++.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL-LQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE-EEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 75432 122235899999999999999999999999999999987653 3445668888999998865 46789
Q ss_pred EEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC---CceeEec
Q 018784 162 SSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN---TESASLE 236 (350)
Q Consensus 162 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~---~~~~~~~ 236 (350)
++|+.|++|++||+++++++..+.. ...|++++|+|++.+++++ .|+.|++||++....+..+..... ...+.+.
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 9999999999999999999888875 5689999999999887654 689999999998776655543321 2344555
Q ss_pred CCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 237 PKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 237 ~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
+ ++.++++|+.|+.|++||+.+++.+..+.+|..+|++++|+|++++|++|+.|++|+||+
T Consensus 294 ~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 294 L-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred C-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 4 589999999999999999999999999999999999999999999999999999999995
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.2e-45 Score=323.76 Aligned_cols=289 Identities=27% Similarity=0.471 Sum_probs=252.0
Q ss_pred cceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEE
Q 018784 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (350)
Q Consensus 7 ~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~ 86 (350)
.+...+.||.++|.+++|+| +|++||+|+.|++++||+..+++....+.+|...|.+++|++++.++++++.|+.|+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~---~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp EEEEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeEEEEcccCCcEEEEEECC---CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 33445689999999999987 999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 87 LWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 87 vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
+||+.+++.+..+ .|...|.+++|+|++++|++|+.|+.|++||+.+... ......|...+.+++|.+ ++.++++++
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 168 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNR-DGSLIVSSS 168 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-EEEecCCCCcEEEEEEcC-CCCEEEEEe
Confidence 9999998877766 4889999999999999999999999999999986543 344566788899999975 566788999
Q ss_pred CCCeEEEEECCCCceeEeec--CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC---ceeEecCCC
Q 018784 166 DSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT---ESASLEPKL 239 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~ 239 (350)
.|+.|++||+++++.+..+. ...++..++|+|++++++++ .++.|++||+++.+.+..+..+... ....+.+..
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 99999999999998877764 34578999999999887655 5899999999998887776554332 233445556
Q ss_pred CcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEec--CCCcEEEecCC
Q 018784 240 GNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQTN 300 (350)
Q Consensus 240 ~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs--~Dg~v~vw~~~ 300 (350)
+.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 249 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 249 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88999999999999999999999999999999999999999999999987 69999999864
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.3e-45 Score=327.57 Aligned_cols=292 Identities=20% Similarity=0.306 Sum_probs=245.2
Q ss_pred ccccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC-----CceeeeccCccCCeEEEEECCCCcEEEE
Q 018784 4 RKVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----GDWIGTFEGHKGAVWSCCLDANALFSAS 78 (350)
Q Consensus 4 ~~~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~l~s 78 (350)
+.+.+.-.+.||+++|.+++|+| .++.+|+|||.|++|++|+... +.++..+.+|...|.+++|++++.+++|
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~--~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 82 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSA--GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALS 82 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECS--SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEEEEccccceEEEEEccC--CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEE
Confidence 44455556789999999999987 2347999999999999999753 3457789999999999999999999999
Q ss_pred eeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCC-
Q 018784 79 GSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS- 156 (350)
Q Consensus 79 ~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~- 156 (350)
|+.|++|++||+.+++....+ .|...|.+++|+|++.+|++|+.|++|++||+... .......|...+.++.+.+.
T Consensus 83 ~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC-
T ss_pred EeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCC
Confidence 999999999999999877766 59999999999999999999999999999999632 23445678889999999864
Q ss_pred ----CCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC
Q 018784 157 ----DQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT 230 (350)
Q Consensus 157 ----~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~ 230 (350)
+...+++++.|++|++||+++++....+.. ..++.+++|+|++++|+++ .|+.|++||+++.+.+..+..+...
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v 240 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCE
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcE
Confidence 345889999999999999999988777764 5789999999999988765 6899999999999888887766656
Q ss_pred ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--------CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--------GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 231 ~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--------~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
..+.+.| ++.++++++. ..+++|++..+..+..+. .|...+.+++|+|+|++|++|+.|+.|+|||+.+
T Consensus 241 ~~~~~sp-~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 241 FSLAFSP-NRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEECS-SSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEEEcC-CCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 6677776 4677777664 559999998877665543 3466799999999999999999999999999754
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-46 Score=341.19 Aligned_cols=287 Identities=22% Similarity=0.329 Sum_probs=244.5
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
++||.++|++++|+| +|.+|+|||.|++|+|||..+++....+.+|...|.+++|+|++.++++|+.|+.|++||+.
T Consensus 62 l~gH~~~V~~~~~sp---~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp ECCCSSCEEEEEECT---TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred ccccccEEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 589999999999987 99999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCe-------ee-eeeccccEeEEEEcCC-CCeEEEeeCCCeEEEEECCCCCCCCee----ecCCCCcEEEEEEeCCCC
Q 018784 92 TGDE-------KH-SFEHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPRE----VGNSSGSIRTVAWLHSDQ 158 (350)
Q Consensus 92 ~~~~-------~~-~~~h~~~V~~~~~~~~-~~~l~sg~~d~~v~vwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~ 158 (350)
+... .. ...|...|.++.|+|+ +..|++|+.|++|++||+.++...... ...|...+.++.|.+.++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 5321 11 2358889999999996 457999999999999999876533211 145778899999988888
Q ss_pred cEEEEEeCCCeEEEEECCC-CceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC------
Q 018784 159 TILSSCTDSGGVRLWDARS-GKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN------ 229 (350)
Q Consensus 159 ~~~~s~~~dg~i~iwd~~~-~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~------ 229 (350)
.++++|+.|++|++||++. ++.+..+.. ...|.+++|+|++++++++ .|+.|++||+++...+..+..+..
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccccc
Confidence 8999999999999999984 466666664 5689999999999887765 589999999999887776654321
Q ss_pred --CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEee----cCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 230 --TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCN----KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 230 --~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~----~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
...+.+.+ +++++++|+.|+.|++||+.+++.+..+ .+|.+.|++++|+|++.+|+|||.|++|++|++...
T Consensus 299 ~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 299 PIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 23455555 5899999999999999999998887766 689999999999999999999999999999998643
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-45 Score=333.13 Aligned_cols=285 Identities=18% Similarity=0.209 Sum_probs=229.2
Q ss_pred eccCCceeEEEecccCCCccEEEEEeC------CCCeeEeeCCCCceee----eccCccCCeEEEEECCCCcEEEEeeCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASK------DSSPMLRNGETGDWIG----TFEGHKGAVWSCCLDANALFSASGSAD 82 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~------d~~v~iw~~~~~~~~~----~l~gH~~~V~~v~~~~~~~~l~s~s~D 82 (350)
.+|+..|.+|+|+| ||++||+||. |+++++|+..++.... ...+|...|.+++|+|++.++ +++.|
T Consensus 39 ~~H~~~V~~v~fSp---DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRR---DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS 114 (357)
T ss_dssp -CCCSEEEEEEECS---SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT
T ss_pred ccccCCEEEEEECC---CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC
Confidence 57999999999997 9999999997 6778889887765543 345799999999999998765 57889
Q ss_pred CeEEEeeCCCCCeee-----eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCC
Q 018784 83 FTAKLWDALTGDEKH-----SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 83 g~v~vWd~~~~~~~~-----~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
|+|+|||+.+++... ...|...|.+++|+|++++|++|+.|++|++||+.++.. ......|...|.+++|++.+
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~-~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV-LKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEEcCCCCCEEEEEEccCC
Confidence 999999998776433 235889999999999999999999999999999986543 33446688899999999887
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEeec---CCCCeEEEEEecCC-cEEEE-EcCCcEEEEECCCcceeeeeecCCCC-c
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCNT-E 231 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~-~~~~~i~vwd~~~~~~~~~~~~~~~~-~ 231 (350)
..++++++.|++|++||++++++...+. ....+.+++|+|++ .++++ +.++.|++||+++.++++.+..+... .
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEE
Confidence 7788999999999999999998776654 34578999999974 56655 46889999999999888877665443 4
Q ss_pred eeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC-CCCEEEEecCCCcEEEecCCCCC
Q 018784 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP-GGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 232 ~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp-~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
.+.+.+...++|++|+.|++|+|||+.+++.+..+ +|.+.|++|+|+| ++.+|+|||.|++|++|++....
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 56677766688999999999999999998877654 8999999999998 78999999999999999986543
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.5e-45 Score=327.92 Aligned_cols=284 Identities=16% Similarity=0.154 Sum_probs=230.9
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC-----------ceeeeccCccCCeEEEEECCCCcEEEEeeC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----------DWIGTFEGHKGAVWSCCLDANALFSASGSA 81 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~-----------~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~ 81 (350)
..|...|.+++|+| ||++|++++ |+++|+||.... ........|...|.+++|++++ .+++|+.
T Consensus 27 ~~~~~~v~~~~fs~---dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~ 101 (344)
T 4gqb_B 27 ACMERQLEAARYRS---DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD 101 (344)
T ss_dssp SSCCSEEEEEEECT---TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET
T ss_pred ccccCCEEEEEECC---CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC
Confidence 46788899999987 999999888 789999984311 1111223366789999999986 5679999
Q ss_pred CCeEEEeeCCCCCeeeee-----eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCC
Q 018784 82 DFTAKLWDALTGDEKHSF-----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS 156 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~-----~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (350)
||+|+|||+.+++....+ .|...|++++|+|++++|++|+.|++|++||+.++.. ......|.+.|.+++|++.
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~-~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV-LSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSS
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEEcCcCCceEEEEecCC
Confidence 999999999888754432 5899999999999999999999999999999987543 3445678899999999988
Q ss_pred CCcEEEEEeCCCeEEEEECCCCceeEeecC---CCCeEEEEEecC-CcEEEE-EcCCcEEEEECCCcceeeeeecCCCC-
Q 018784 157 DQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRD-GRYITT-ADGSSVKFWDANHFGLVKGYNMPCNT- 230 (350)
Q Consensus 157 ~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~-~~~l~~-~~~~~i~vwd~~~~~~~~~~~~~~~~- 230 (350)
+..++++|+.|++|++||++++++...+.. ...+.+++|+|+ ++++++ +.|+.|++||+++.+++..+..+...
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v 260 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV 260 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE
T ss_pred CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE
Confidence 888999999999999999999998887753 346889999985 566665 56899999999999988888766544
Q ss_pred ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEEecCCCcEEEecCCCCC
Q 018784 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 231 ~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~lasgs~Dg~v~vw~~~~~~ 303 (350)
..+.+.|...++|++|+.|++|++||+.+++.+ .+.+|.+.|++++|+|+++ +|+|||.|++|++|++....
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 456677655578999999999999999988765 5789999999999999986 57899999999999987544
No 11
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.7e-44 Score=320.33 Aligned_cols=287 Identities=20% Similarity=0.297 Sum_probs=242.2
Q ss_pred EeeccCCceeEEEecccCCC-ccEEEEEeCCCCeeEeeCCCC-----ceeeeccCccCCeEEEEECCCCcEEEEeeCCCe
Q 018784 11 VCHGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETG-----DWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~d-g~~lasgs~d~~v~iw~~~~~-----~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~ 84 (350)
.++||+++|++|+|+| + +++|||||.|++|+|||+.+. .+..++.+|...|.+++|++++.++++++.|+.
T Consensus 33 tL~GH~~~V~~v~~sp---~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 33 TLKGHNGWVTQIATTP---QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EECCCSSCEEEEEECT---TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCccCCEEEEEEeC---CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 4689999999999997 5 679999999999999998654 356789999999999999999999999999999
Q ss_pred EEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCC-CcEEE
Q 018784 85 AKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD-QTILS 162 (350)
Q Consensus 85 v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~ 162 (350)
|++|+.......... .+...+..+.+++++.+|++++.|+.+++||+............|...+..++|.+.. ..+++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 999999877655544 4667788999999999999999999999999875544334455678889999988654 45788
Q ss_pred EEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCC
Q 018784 163 SCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLG 240 (350)
Q Consensus 163 s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
+++.|++|++||+++++.+..+.. ..+|++++|+|++++|+++ .|+.|++||+++...+..+........+.+.+ +
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~--~ 267 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP--N 267 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECS--S
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCC--C
Confidence 999999999999999998888775 5689999999999888664 68999999999998888777665555555655 3
Q ss_pred cEEEEecCCCeEEEEEcccCeeEEee---------cCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 241 NIFIAGGEDMWVHVFDFHTGEQIGCN---------KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 241 ~~l~sg~~d~~i~v~d~~~~~~~~~~---------~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
..+++++.|+.|++||+.++..+..+ .+|...|++++|+|++++|++|+.||.|+|||+.++
T Consensus 268 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 268 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 56777788999999999887765543 468899999999999999999999999999998654
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.6e-44 Score=323.97 Aligned_cols=289 Identities=23% Similarity=0.330 Sum_probs=230.7
Q ss_pred eEeeccCCceeEEEecc--cC-CCccEEEEEeCCCCeeEeeCCC-------CceeeeccCccCCeEEEEECCCCcEEEEe
Q 018784 10 LVCHGHSRPVVDLFYSP--IT-PDGFFLVSASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDANALFSASG 79 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~--~s-~dg~~lasgs~d~~v~iw~~~~-------~~~~~~l~gH~~~V~~v~~~~~~~~l~s~ 79 (350)
.+++||+++|++++|.+ .+ +++.+|||||.|++|+|||..+ +.+...+.+|...|.+++|++++.+++||
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 34689999999999821 12 3899999999999999999864 34567899999999999999999999999
Q ss_pred eCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC-CeeecCCCCcEEEEEEeCCC
Q 018784 80 SADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP-PREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 80 s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 157 (350)
+.|++|++||+.+++....+ .|...|.+++|+|++++|++++.|++|++||+...... ......|...+.+++|.+..
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 99999999999998877766 59999999999999999999999999999998632110 01112577889999998754
Q ss_pred ---------CcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCc-ceeeeee
Q 018784 158 ---------QTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHF-GLVKGYN 225 (350)
Q Consensus 158 ---------~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~-~~~~~~~ 225 (350)
..++++++.|++|++||. +.+....+. +..++.+++|+|++++|+++ .|+.|++||++.. .....+.
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 253 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD 253 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec
Confidence 268899999999999994 455555554 45789999999999988765 6899999999543 3333333
Q ss_pred cCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEE--eec-----------CCCcCEEEEEEcCCCCEEEEecCCC
Q 018784 226 MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIG--CNK-----------GHHGPVHCVRFSPGGESYASGSEDG 292 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~--~~~-----------~h~~~v~~l~~sp~~~~lasgs~Dg 292 (350)
.......+.+.|. +.+++ ++.|+.|++||+.+++... .+. +|...|.+++|+|++++|++|+.||
T Consensus 254 ~~~~v~~v~~sp~-~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg 331 (343)
T 2xzm_R 254 AGSTINQIAFNPK-LQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDG 331 (343)
T ss_dssp CSSCEEEEEECSS-SCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTS
T ss_pred CCCcEEEEEECCC-CCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCc
Confidence 3334456667664 56655 5568889999998765432 332 7888999999999999999999999
Q ss_pred cEEEecCCC
Q 018784 293 TIRIWQTNP 301 (350)
Q Consensus 293 ~v~vw~~~~ 301 (350)
.|++|++..
T Consensus 332 ~v~~w~~~~ 340 (343)
T 2xzm_R 332 VIRTFSFET 340 (343)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEc
Confidence 999998753
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.2e-44 Score=346.69 Aligned_cols=287 Identities=20% Similarity=0.304 Sum_probs=236.6
Q ss_pred eeccCCceeEEEecccCCCcc-EEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 12 CHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
+.||.++|.+++|+| ++. +|++|+.|+++++||..+++++.++.+|.+.|++++|+|++.+|+|++.|++|++||.
T Consensus 143 l~gh~~~v~~v~f~p---~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 143 LTGQARAMNSVDFKP---SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CCCCSSCEEEEEECS---SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ecCCCCCceEEEECC---CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 479999999999997 765 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeee--------eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC------------------------
Q 018784 91 LTGDEKHSF--------EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP------------------------ 138 (350)
Q Consensus 91 ~~~~~~~~~--------~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~------------------------ 138 (350)
.+++....+ .|...|.+++|+|++++|++++.|++|++||+.++....
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 988877766 589999999999999999999999999999997543211
Q ss_pred ------------------eeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee----------------
Q 018784 139 ------------------REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL---------------- 184 (350)
Q Consensus 139 ------------------~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~---------------- 184 (350)
.....|...|.+++|++ ++.++++++.|++|++||+++++....+
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 12235788899999986 6678889999999999999876543221
Q ss_pred -------------------------------------------------------------------cCCCCeEEEEEec
Q 018784 185 -------------------------------------------------------------------ETKSPVTSAEVSR 197 (350)
Q Consensus 185 -------------------------------------------------------------------~~~~~v~~~~~~~ 197 (350)
.+...+.+++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0012356788999
Q ss_pred CCcEEEEE-cCCcEEEEECCCcce--eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEccc-CeeEEe--ecCCCc
Q 018784 198 DGRYITTA-DGSSVKFWDANHFGL--VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHT-GEQIGC--NKGHHG 271 (350)
Q Consensus 198 ~~~~l~~~-~~~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~-~~~~~~--~~~h~~ 271 (350)
++++++++ .|+.|++||+.+... ............+.+.| ++++|++++.|++|++||+.+ ++.+.. +.+|..
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fsp-dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~ 537 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN-NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA 537 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS
T ss_pred CCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECC-CCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccc
Confidence 99988765 578999999876543 22222233345566665 689999999999999999988 665544 345999
Q ss_pred CEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 272 PVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 272 ~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
.|++++|+|++++|||||.|++|+||++..+.
T Consensus 538 ~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 538 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred ceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 99999999999999999999999999987543
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-43 Score=324.47 Aligned_cols=282 Identities=22% Similarity=0.352 Sum_probs=233.9
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccC------------------CeEEEEECCCCc
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG------------------AVWSCCLDANAL 74 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~------------------~V~~v~~~~~~~ 74 (350)
.+|..+|.+++|+| ||++||+|+ |++++||+..+++.+..+.+|.. .|++++|+|++.
T Consensus 61 ~~h~~~V~~v~fsp---dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSN---DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp EECSSCCCEEEECT---TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred cCCCCEEEEEEECC---CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 37999999999987 999999987 78999999999999888877653 389999999999
Q ss_pred EEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEE
Q 018784 75 FSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAW 153 (350)
Q Consensus 75 ~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~ 153 (350)
++++|+.|++|++||+.+++....+ .|...|.+++|+|++.+|++++.|++|++||+.++.... ...+...+.+++|
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~--~~~~~~~v~~~~~ 214 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL--TLSIEDGVTTVAV 214 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EEECSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE--EEEcCCCcEEEEE
Confidence 9999999999999999988877666 589999999999999999999999999999998654322 2235567999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEECCCCceeEeec--------CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcce----
Q 018784 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--------TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGL---- 220 (350)
Q Consensus 154 ~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~---- 220 (350)
++.++.++++|+.|++|++||+++++.+..+. +...+.+++|+|++++++++ .|+.|++||+++...
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 98788899999999999999999998877662 34679999999999887665 589999999976432
Q ss_pred --------eeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC------CCCEE
Q 018784 221 --------VKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP------GGESY 285 (350)
Q Consensus 221 --------~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp------~~~~l 285 (350)
...+..+... ..+.+.+ ++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 373 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred cCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence 2223223222 2334444 578999999999999999999999999999999999999986 67899
Q ss_pred EEecCCCcEEEecCCC
Q 018784 286 ASGSEDGTIRIWQTNP 301 (350)
Q Consensus 286 asgs~Dg~v~vw~~~~ 301 (350)
+|||.||+|+||++..
T Consensus 374 ~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 374 ATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEETTSEEEEEEEEE
T ss_pred EEECCCCcEEECcccc
Confidence 9999999999999753
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=317.01 Aligned_cols=291 Identities=22% Similarity=0.334 Sum_probs=228.9
Q ss_pred eEeeccCC-ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCcee---eeccCccCCeEEEEECCCCcEEEEeeCCCeE
Q 018784 10 LVCHGHSR-PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI---GTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (350)
Q Consensus 10 ~~~~gH~~-~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~---~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v 85 (350)
..+.+|.+ +|++++|+| +|++||+|+.|++|+||+..+++.. ....+|...|.+++|+|++.+|++|+.|++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp---~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNP---AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEECCSTTSCEEEEEECT---TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecCCCCCcEEEEEECC---CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 34579998 999999987 9999999999999999999887643 2347899999999999999999999999999
Q ss_pred EEeeCCCCC--eeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC--CeeecCCCCcEEEEEEeCCCCcE
Q 018784 86 KLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHSDQTI 160 (350)
Q Consensus 86 ~vWd~~~~~--~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~ 160 (350)
++||..++. ....+ .|...|.+++|+|++++|++|+.|++|++||+...... ......|...|.+++|++. +.+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~ 164 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS-QEL 164 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS-SSC
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC-CCE
Confidence 999987764 33444 58999999999999999999999999999999754322 2344578889999999864 567
Q ss_pred EEEEeCCCeEEEEECCCCc--eeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcc---------------ee
Q 018784 161 LSSCTDSGGVRLWDARSGK--IVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG---------------LV 221 (350)
Q Consensus 161 ~~s~~~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~---------------~~ 221 (350)
+++++.|++|++||+++++ +...+. +...|.+++|+|++++|+++ .|+.|++||..... ++
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 8889999999999998875 334555 45789999999999887664 68999999964321 11
Q ss_pred eeeec-CC-CCceeEecCCCCcEEEEecCCCeEEEEEcccCee---------EEeecCCCcCEEEEEEcCCC-CEEEEec
Q 018784 222 KGYNM-PC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ---------IGCNKGHHGPVHCVRFSPGG-ESYASGS 289 (350)
Q Consensus 222 ~~~~~-~~-~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~---------~~~~~~h~~~v~~l~~sp~~-~~lasgs 289 (350)
..+.. +. ....+.+.+ .+..|++++.|+.|++|+...+.. .....+|...|++++|+|++ .+|||||
T Consensus 245 ~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp EEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred EEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 11111 11 223444554 478899999999999999875431 22346899999999999997 4899999
Q ss_pred CCCcEEEecCCCCCcc
Q 018784 290 EDGTIRIWQTNPPNHE 305 (350)
Q Consensus 290 ~Dg~v~vw~~~~~~~~ 305 (350)
.||+|++|++...+..
T Consensus 324 ~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 324 DDGEVAFWKYQRPEGL 339 (345)
T ss_dssp TTSCEEEEEECC----
T ss_pred CCCcEEEEEecCCCCc
Confidence 9999999998766543
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-43 Score=312.41 Aligned_cols=288 Identities=19% Similarity=0.264 Sum_probs=219.5
Q ss_pred ccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC--ceeeec-cC-ccCCeEEEEECCCCcEEEEeeC
Q 018784 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTF-EG-HKGAVWSCCLDANALFSASGSA 81 (350)
Q Consensus 6 ~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~--~~~~~l-~g-H~~~V~~v~~~~~~~~l~s~s~ 81 (350)
+..-..+.||+++|++++|+| + +||+|+.|++|+||++.++ +.+..+ .+ |.+.|++++|+|++.+|++|+.
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~---~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQ---G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEET---T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cccceeeccCCCceeeeccCC---C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 333445689999999999986 5 9999999999999999875 445556 45 9999999999999999999999
Q ss_pred CCeEEEeeCCCC-------Ceeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC---CeeecCCCCcEEE
Q 018784 82 DFTAKLWDALTG-------DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRT 150 (350)
Q Consensus 82 Dg~v~vWd~~~~-------~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~---~~~~~~~~~~v~~ 150 (350)
|++|++||.... +....+ .|...|.+++|+|++++|++|+.|++|++||+...... ......|...|.+
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 999999998532 223333 58999999999999999999999999999999543221 2345678889999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCCC--ceeEeecC-CCCeEEEEEecC--CcEEE-EEcCCcEEEEECCCc------
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARSG--KIVQTLET-KSPVTSAEVSRD--GRYIT-TADGSSVKFWDANHF------ 218 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~~--~~~~~~~~-~~~v~~~~~~~~--~~~l~-~~~~~~i~vwd~~~~------ 218 (350)
++|+| ++.++++|+.|++|++||++++ +++..+.. ...|.+++|+|+ +.+++ ++.|+.|++||++..
T Consensus 159 v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 159 VIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 99986 5668889999999999999776 56667764 568999999998 55554 567899999998654
Q ss_pred --ceeeeeec-C-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCe--eEEe-ecCCCc-CEEEEEEcC--CCCEEEEe
Q 018784 219 --GLVKGYNM-P-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE--QIGC-NKGHHG-PVHCVRFSP--GGESYASG 288 (350)
Q Consensus 219 --~~~~~~~~-~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~--~~~~-~~~h~~-~v~~l~~sp--~~~~lasg 288 (350)
.+...+.. + .....+.+.+ +.+|++++.|+.|++||..+++ .+.. ..+|.. .|.+++|+| ++++||||
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGF--NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECT--TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred eeEEeeecccccccceEEEEEcC--CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe
Confidence 22222221 1 1233445553 4589999999999999998874 3333 467887 899999999 68899999
Q ss_pred cCCCcEEEecCCC
Q 018784 289 SEDGTIRIWQTNP 301 (350)
Q Consensus 289 s~Dg~v~vw~~~~ 301 (350)
|.||+|+||++..
T Consensus 316 s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 316 GDDGIVNFWSLEK 328 (330)
T ss_dssp ETTSEEEEEEC--
T ss_pred cCCCcEEEEEecc
Confidence 9999999999753
No 17
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-42 Score=310.30 Aligned_cols=294 Identities=27% Similarity=0.478 Sum_probs=257.3
Q ss_pred cccccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCC
Q 018784 3 KRKVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD 82 (350)
Q Consensus 3 ~~~~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D 82 (350)
.+....+..++||.++|.+++|+| +|++|++|+.|+.|++||..+++.+..+.+|...|.+++|++++.++++++.|
T Consensus 19 ~G~~~~~~~l~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 19 QGSHMKAIKLTGHERPLTQVKYNK---EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp SCCSEEEEEEECCSSCEEEEEECT---TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eccccccEEEEEeeceEEEEEEcC---CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC
Confidence 355667788899999999999987 99999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCC-----CeEEEEECCCCCCC----------CeeecCCCC-
Q 018784 83 FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAP----------PREVGNSSG- 146 (350)
Q Consensus 83 g~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~----------~~~~~~~~~- 146 (350)
|.|++||+.+++....+.+...|.+++|+|++++|++++.+ +.|++||+...... ......+.+
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999999998888899999999999999999999999 99999998755432 222233444
Q ss_pred -cEEEEEEeCCCCcEEEEEeCCCeEEEEECCC-CceeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceee
Q 018784 147 -SIRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVK 222 (350)
Q Consensus 147 -~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~ 222 (350)
.+.+++|.+ ++.++++++.|+.|++||+++ ++.+..+. +...+.+++|+|++++|+++ .++.|++||+++...+.
T Consensus 176 ~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 176 DAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 789999886 555778889999999999998 67777776 45789999999999887655 68899999999998888
Q ss_pred eeecCCCCceeEecCCCCcEEEEecCCC--------------eEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEe
Q 018784 223 GYNMPCNTESASLEPKLGNIFIAGGEDM--------------WVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~sg~~d~--------------~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasg 288 (350)
.+........+.+.+ ++.++++++.++ .+++||+.+++.+..+.+|...|.+++|+|++++|++|
T Consensus 255 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 255 KYETDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp EEECSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eecCCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 887655556666666 578888888887 89999999999999999999999999999999999999
Q ss_pred cCCCcEEEecCCC
Q 018784 289 SEDGTIRIWQTNP 301 (350)
Q Consensus 289 s~Dg~v~vw~~~~ 301 (350)
+.||.|++|++..
T Consensus 334 ~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 334 GEDGFIRLHHFEK 346 (369)
T ss_dssp ETTSEEEEEEECH
T ss_pred cCCCeEEEEECcc
Confidence 9999999999864
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-42 Score=333.60 Aligned_cols=288 Identities=15% Similarity=0.231 Sum_probs=241.3
Q ss_pred eeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC--ceeeeccCccCCeEEEEECCCCcEEEEeeCC----
Q 018784 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDANALFSASGSAD---- 82 (350)
Q Consensus 9 ~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~--~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D---- 82 (350)
...+.||+++|++++|+| ||++||+|+.|++|+|||..++ ....++.+|.+.|.+++|+|+++++++++.+
T Consensus 52 ~~~~~~h~~~v~~~~~sp---dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSP---SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp CEEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred CeEecCCCCceEEEEECC---CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 344689999999999987 9999999999999999998754 3456889999999999999999999998876
Q ss_pred CeEEEeeCCCCCeeeee-eccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcE
Q 018784 83 FTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (350)
Q Consensus 83 g~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (350)
+.|++||. +.....+ .|...|.+++|+|++. .|++|+.|++|++||...... ......|...|.+++|+| ++.+
T Consensus 129 ~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fsp-dg~~ 204 (611)
T 1nr0_A 129 GHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNP-DGSL 204 (611)
T ss_dssp EEEEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECT-TSSE
T ss_pred eEEEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEECC-CCCE
Confidence 58999995 3333333 6899999999999987 599999999999999865432 234567889999999986 5678
Q ss_pred EEEEeCCCeEEEEECCCCceeEeec--------CCCCeEEEEEecCCcEEEE-EcCCcEEEEECCCcceeeeeecCCCC-
Q 018784 161 LSSCTDSGGVRLWDARSGKIVQTLE--------TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNT- 230 (350)
Q Consensus 161 ~~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~-~~~~~i~vwd~~~~~~~~~~~~~~~~- 230 (350)
+++++.|++|++||+++++.+..+. +...|.+++|+|++++|++ +.|++|++||+++.+++..+......
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcc
Confidence 8899999999999999998887773 5578999999999988765 46899999999998887776543221
Q ss_pred -ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCc
Q 018784 231 -ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNH 304 (350)
Q Consensus 231 -~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 304 (350)
....+.. .++.+++++.|+.|++||..+++....+.+|...|++++|+|++++|++++.|++|++||+.....
T Consensus 285 ~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 285 DQQLGIIW-TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp GCEEEEEE-CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred ceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 1111111 468899999999999999999988888999999999999999999999999999999999976544
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.1e-42 Score=336.86 Aligned_cols=286 Identities=20% Similarity=0.274 Sum_probs=236.7
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC-----ceeeeccCccCCeEEEEECCCCcEEEEeeCCCeE
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----DWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~-----~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v 85 (350)
+++||++.|++++|+| .++.+|+|||.|++|+||++.+. .....+.+|...|.+++|++++.+++||+.||+|
T Consensus 377 ~l~~H~~~V~~v~~~~--~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPI--DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCT--TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecC--CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4689999999999987 24579999999999999998653 4456889999999999999999999999999999
Q ss_pred EEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC--eeecCCCCcEEEEEEeCCC-CcEE
Q 018784 86 KLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP--REVGNSSGSIRTVAWLHSD-QTIL 161 (350)
Q Consensus 86 ~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~~~~ 161 (350)
+|||+.++.....+ .|...|.+++|+|++.+|++|+.|++|++||+....... .....|...|.+++|++.. ...+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999988876665 699999999999999999999999999999975321111 1113577789999998765 4688
Q ss_pred EEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCC
Q 018784 162 SSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKL 239 (350)
Q Consensus 162 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
++++.|++|++||++++++...+.. ...|.+++|+|++++++++ .|+.|++||+++.+.+..+........+.+.+ +
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~ 613 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSP-N 613 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECS-S
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcC-C
Confidence 9999999999999999998888875 4689999999999988765 68999999999988877666555555666665 3
Q ss_pred CcEEEEecCCCeEEEEEcccCeeEEeecCCC-------------------cCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 240 GNIFIAGGEDMWVHVFDFHTGEQIGCNKGHH-------------------GPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 240 ~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~-------------------~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
+.++++ +.|+.|++||+.++..+..+..+. ..+++++|+|++++|+||+.||.|+||++.
T Consensus 614 ~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWLCA-ATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEEEE-EETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEE-EcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 555555 456779999999998877654321 237899999999999999999999999974
No 20
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-41 Score=311.21 Aligned_cols=288 Identities=17% Similarity=0.150 Sum_probs=244.6
Q ss_pred ccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc------eeeeccCccCCeEEEEECCC----C--
Q 018784 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD------WIGTFEGHKGAVWSCCLDAN----A-- 73 (350)
Q Consensus 6 ~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~------~~~~l~gH~~~V~~v~~~~~----~-- 73 (350)
+....++++|.++|++++|+| .+|++|+.|++|+||+..+++ .+..+.+|...|.+++|+++ +
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~-----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN-----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 80 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS-----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEE
T ss_pred hhhhhhhhhhhcCeEEEEecC-----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcc
Confidence 344555689999999999986 599999999999999999888 78889999999999999999 9
Q ss_pred -cEEEEeeCCCeEEEeeCCCCCe-----eeee-ec-----cccEeEEEEc----CCCCe-EEEeeCCCeEEEEECCC---
Q 018784 74 -LFSASGSADFTAKLWDALTGDE-----KHSF-EH-----KHIVRACAFS----EDTHL-LLTGGFEKILRIFDLNR--- 133 (350)
Q Consensus 74 -~~l~s~s~Dg~v~vWd~~~~~~-----~~~~-~h-----~~~V~~~~~~----~~~~~-l~sg~~d~~v~vwd~~~--- 133 (350)
.++++++.||.|++||+.++.. ...+ .| ...|.+++|+ |++.+ |++++.|+.|++||+..
T Consensus 81 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 81 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred ccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 9999999999999999988775 4444 46 4889999999 99999 99999999999999986
Q ss_pred ---CCCCC-----eee------cCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-------CCCeEE
Q 018784 134 ---PDAPP-----REV------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-------KSPVTS 192 (350)
Q Consensus 134 ---~~~~~-----~~~------~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~v~~ 192 (350)
..... ... ..+...+.+++|.+.+ ++++++.|+.|++||+++++.+..+.. ..++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 44333 221 3467889999998755 888999999999999999999888876 778999
Q ss_pred EEEecCCcEEEEE-cC---CcEEEEECCCcceeeeeec-------------CCC-CceeEecCCCCcEEEEecCCCeEEE
Q 018784 193 AEVSRDGRYITTA-DG---SSVKFWDANHFGLVKGYNM-------------PCN-TESASLEPKLGNIFIAGGEDMWVHV 254 (350)
Q Consensus 193 ~~~~~~~~~l~~~-~~---~~i~vwd~~~~~~~~~~~~-------------~~~-~~~~~~~~~~~~~l~sg~~d~~i~v 254 (350)
++|+|++++|+++ .+ +.|++||+++...+..+.. +.. ...+.+.+ ++++|++++.|+.|++
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRF 317 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEE
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEE
Confidence 9999999988765 46 7999999999888777765 333 33455555 5889999999999999
Q ss_pred EEcccCeeEEeec------CC---------------CcCEEEEEEcCCC----------CEEEEecCCCcEEEecCCC
Q 018784 255 FDFHTGEQIGCNK------GH---------------HGPVHCVRFSPGG----------ESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 255 ~d~~~~~~~~~~~------~h---------------~~~v~~l~~sp~~----------~~lasgs~Dg~v~vw~~~~ 301 (350)
||+.+++.+..+. +| ...|++++|+|++ ++|++|+.||.|++|++..
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 9999999999888 88 9999999999998 7999999999999999754
No 21
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=303.60 Aligned_cols=297 Identities=17% Similarity=0.236 Sum_probs=238.2
Q ss_pred ccccceeEeeccCCceeEEEecccCCCc-cEEEEEeC---CCCeeEeeCCCCceeeec-cCccCCeEEEEECCC---CcE
Q 018784 4 RKVAVPLVCHGHSRPVVDLFYSPITPDG-FFLVSASK---DSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDAN---ALF 75 (350)
Q Consensus 4 ~~~~~~~~~~gH~~~v~~~~~~~~s~dg-~~lasgs~---d~~v~iw~~~~~~~~~~l-~gH~~~V~~v~~~~~---~~~ 75 (350)
++.-+..++++|.++|.+++|+| ++ .++++|+. |++|+||+..+++..... .+|...|.+++|+++ +.+
T Consensus 6 ~~~~~~~~~~~h~~~v~~~~~~p---~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 6 KPQIIAHIQKGFNYTVFDCKWVP---CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRY 82 (357)
T ss_dssp CCCEEEEEEEECSSCEEEEEECT---TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCC
T ss_pred hhHHhhhhccCCCCceEEEEEcC---CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCce
Confidence 33444555689999999999997 77 56677776 999999999998876543 379999999999998 699
Q ss_pred EEEeeCCCeEEEeeCCCCC-eeeee-eccccEeEEE------EcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCC--
Q 018784 76 SASGSADFTAKLWDALTGD-EKHSF-EHKHIVRACA------FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-- 145 (350)
Q Consensus 76 l~s~s~Dg~v~vWd~~~~~-~~~~~-~h~~~V~~~~------~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~-- 145 (350)
+++++.||.|++||+.+++ ....+ .|...|.+++ |+|++++|++++.|+.|++||+............+.
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 9999999999999998877 55555 5889999995 578999999999999999999987664444444333
Q ss_pred --CcEEEEEEe---CCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEec---CCcEEEE-EcCCcEEEEECC
Q 018784 146 --GSIRTVAWL---HSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSR---DGRYITT-ADGSSVKFWDAN 216 (350)
Q Consensus 146 --~~v~~~~~~---~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~-~~~~~i~vwd~~ 216 (350)
..+.+++|. .+++.++++++.|+.|++||+++++......+...+.+++|+| ++.++++ +.++.|++||++
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 378888863 3677889999999999999999999887777888999999999 7777655 568999999998
Q ss_pred Ccceeeeee-----cCC-CCceeEecCCCCcEEEEecCCCeEEEEEcccC-------------------eeEEeecCCCc
Q 018784 217 HFGLVKGYN-----MPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTG-------------------EQIGCNKGHHG 271 (350)
Q Consensus 217 ~~~~~~~~~-----~~~-~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~-------------------~~~~~~~~h~~ 271 (350)
+......+. .+. ....+.+.+....+|++|+.|+.|++||+.++ +.+..+.+|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ 322 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC
Confidence 766554443 222 33455666643348999999999999999854 35667889999
Q ss_pred CEEEEEEcCCCCEEE-EecCCCcEEEecCCCCC
Q 018784 272 PVHCVRFSPGGESYA-SGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 272 ~v~~l~~sp~~~~la-sgs~Dg~v~vw~~~~~~ 303 (350)
+|++++|+|++++|+ +|+.|+.|++|++...+
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 999999999999998 89999999999986543
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-40 Score=318.45 Aligned_cols=303 Identities=28% Similarity=0.469 Sum_probs=251.5
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
+.+|..+|.+++|+| ++.+|++++.|+++++|+. +++.+..+.+|...|++++++|++.++++++.|++|++||..
T Consensus 258 ~~~~~~~v~~v~~~~---d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRP---DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 333 (577)
T ss_dssp ECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EecCCCCEEEEEEcC---CCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 479999999999986 9999999999999999995 567888999999999999999999999999999999999987
Q ss_pred CCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEE
Q 018784 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (350)
Q Consensus 92 ~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~ 171 (350)
.........|...|.+++|+|++++|++++.|+.|++||... ........|...|.+++|++ ++.++++++.|++|+
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVK 410 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC--CEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEE
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC--CEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEE
Confidence 655544456889999999999999999999999999999642 23344567888999999986 556777889999999
Q ss_pred EEECCCCceeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecC
Q 018784 172 LWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGE 248 (350)
Q Consensus 172 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~ 248 (350)
+||. +++.+..+. +...+.+++|+|++++++++ .|+.|++||.. .+.+..+..+... ..+.+.| ++++|++++.
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~sp-d~~~las~~~ 487 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSP-DGQTIASASD 487 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECT-TSCEEEEEET
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeC
Confidence 9995 566666665 45789999999999888654 68899999964 4555555544433 3445555 6899999999
Q ss_pred CCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCcccccccccccccee
Q 018784 249 DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTR 328 (350)
Q Consensus 249 d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (350)
|+.|++||. +++.+..+.+|...|++++|+|++++||+++.|+.|+|||+. .+ +......+..
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~---------------~~~~~~~h~~ 550 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---------------LLQTLTGHSS 550 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC---------------EEEEEECCSS
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CC---------------EEEEEcCCCC
Confidence 999999995 688888999999999999999999999999999999999852 11 2223345667
Q ss_pred eeeeEEEcccchh
Q 018784 329 KIEGFHINKEGKA 341 (350)
Q Consensus 329 ~i~~~~~~~~g~~ 341 (350)
.|.++.++|||+.
T Consensus 551 ~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 551 SVWGVAFSPDGQT 563 (577)
T ss_dssp CEEEEEECTTSSC
T ss_pred CEEEEEEcCCCCE
Confidence 7888999999874
No 23
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5e-41 Score=306.48 Aligned_cols=283 Identities=16% Similarity=0.190 Sum_probs=232.6
Q ss_pred EeeccCCceeEEEecccCCCc-cEEEEEeCCCCeeEeeCCCCceeeecc--CccCCeEEEEECC-CCcEEEEeeCCCeEE
Q 018784 11 VCHGHSRPVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDA-NALFSASGSADFTAK 86 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg-~~lasgs~d~~v~iw~~~~~~~~~~l~--gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~ 86 (350)
.+.+|..+|.+++|+| ++ .+||+|+.|++|+|||..+++....+. +|...|.+++|+| ++.++++++.|+.|+
T Consensus 68 ~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHP---THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EECCCSSCEEEEEECS---SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eccCCCCCEEEEEECC---CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 3579999999999997 77 899999999999999999888777665 7999999999999 789999999999999
Q ss_pred EeeCCCCCeeeeee---ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 87 LWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 87 vWd~~~~~~~~~~~---h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
+||+.+........ |...|.+++|+|++++|++|+.|+.|++||+. .........|...|.+++|++.+..++++
T Consensus 145 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 99998643333322 34779999999999999999999999999994 23344556788999999999876668999
Q ss_pred EeCCCeEEEEECCC----CceeEeecCCCCeEEEEEec-CCcEEEEE-cCCcEEEEECCCcceeeeeecCC-------CC
Q 018784 164 CTDSGGVRLWDARS----GKIVQTLETKSPVTSAEVSR-DGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-------NT 230 (350)
Q Consensus 164 ~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~-------~~ 230 (350)
|+.|++|++||+++ ++++..+.+...+.+++|+| ++++++++ .++.|++||+++...+..+..+. ..
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTP 302 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccc
Confidence 99999999999998 66777777888999999999 99887655 58999999999877655544221 11
Q ss_pred ceeEecC----------CCCcEEEEecCCCeEEEEEcccCeeEEeecC--CCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 231 ESASLEP----------KLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 231 ~~~~~~~----------~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~--h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
....+.+ +++++ +|+.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++|+ |+.|++|+
T Consensus 303 ~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 303 IKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN 379 (383)
T ss_dssp CCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred eEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence 1112222 23344 778999999999999999998887 457788889999999999997 99999999
Q ss_pred CCC
Q 018784 299 TNP 301 (350)
Q Consensus 299 ~~~ 301 (350)
+..
T Consensus 380 ~~~ 382 (383)
T 3ei3_B 380 RED 382 (383)
T ss_dssp CC-
T ss_pred cCC
Confidence 863
No 24
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-41 Score=313.02 Aligned_cols=287 Identities=20% Similarity=0.241 Sum_probs=239.8
Q ss_pred cCCceeEEEecccCCCcc-EEEEE----------eCCCCeeEeeCCCCc---eeeeccCccCCeEEEEECCCCcEEEEee
Q 018784 15 HSRPVVDLFYSPITPDGF-FLVSA----------SKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANALFSASGS 80 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~-~lasg----------s~d~~v~iw~~~~~~---~~~~l~gH~~~V~~v~~~~~~~~l~s~s 80 (350)
+..+|.+++|+| +|. +|++| +.|++|+||+..+++ ++..+ .|...|.+++|++++.+|++++
T Consensus 11 ~~~~v~~~~~sp---~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 11 EFSRTATFAWSH---DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp EEEESCBCCBCS---SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEE
T ss_pred hhhhcceEeeCC---CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEc
Confidence 345788898886 886 99999 899999999998875 34344 5899999999999999999999
Q ss_pred CCCeEEEeeCCC----CCeeeee-eccccEeEEEEcCC-CCeEEEeeCCCeEEEEECCCCC------CCCe--eecCCCC
Q 018784 81 ADFTAKLWDALT----GDEKHSF-EHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPD------APPR--EVGNSSG 146 (350)
Q Consensus 81 ~Dg~v~vWd~~~----~~~~~~~-~h~~~V~~~~~~~~-~~~l~sg~~d~~v~vwd~~~~~------~~~~--~~~~~~~ 146 (350)
.||.|++||+.+ ......+ .|...|.+++|+|+ +.+|++++.|+.|++||+.+.. .... ....|..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 999999999987 2344444 58999999999998 8999999999999999998765 2221 2345778
Q ss_pred cEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-------CCCeEEEEEecCC-cEEEE-EcCC---cEEEEE
Q 018784 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-------KSPVTSAEVSRDG-RYITT-ADGS---SVKFWD 214 (350)
Q Consensus 147 ~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~~-~~~~---~i~vwd 214 (350)
.+.+++|++.++.++++++.|++|++||+++++.+..+.. ...+.+++|+|++ .++++ +.++ .|++||
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 8999999987688999999999999999999998888875 5679999999997 45554 4566 999999
Q ss_pred CCCc-ceeeeee-cC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCC-CEEEEecC
Q 018784 215 ANHF-GLVKGYN-MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGG-ESYASGSE 290 (350)
Q Consensus 215 ~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~-~~lasgs~ 290 (350)
+++. ..+..+. .+ .....+.+.+.++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++ .+|++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 247 LRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp TTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS
T ss_pred CCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec
Confidence 9986 4455444 22 2345566777678999999999999999999999999999999999999999998 89999999
Q ss_pred CCcEEEecCCCCCcc
Q 018784 291 DGTIRIWQTNPPNHE 305 (350)
Q Consensus 291 Dg~v~vw~~~~~~~~ 305 (350)
|+.|++|++......
T Consensus 327 d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 327 DNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSEEEEEESCCCCCS
T ss_pred CCcEEEEEccCCCCC
Confidence 999999999765543
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9e-41 Score=295.82 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=211.4
Q ss_pred ceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEE
Q 018784 52 DWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFD 130 (350)
Q Consensus 52 ~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd 130 (350)
+..++|.+|.+.|.+++|+|++.++++++.||+|++||+.++.....+. |...|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 4567899999999999999999999999999999999999988777764 788999999999999999999999999999
Q ss_pred CCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCc-eeEeec-CCCCeEEEEEec-CCcEEE-EEc
Q 018784 131 LNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK-IVQTLE-TKSPVTSAEVSR-DGRYIT-TAD 206 (350)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~~~~-~~~~l~-~~~ 206 (350)
+.+++. ......|...|.+++|.+ ++.++++|+.|++|++||++++. ....+. +...|.+++|+| ++.+++ ++.
T Consensus 84 ~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 84 YNTGEK-VVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TTTCCE-EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCCCcE-EEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 987654 344567889999999986 55678899999999999998874 444555 456899999999 566555 557
Q ss_pred CCcEEEEECCCcceeeeeecCC--CCceeEecC-CCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC
Q 018784 207 GSSVKFWDANHFGLVKGYNMPC--NTESASLEP-KLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE 283 (350)
Q Consensus 207 ~~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~ 283 (350)
|+.|++||+++......+.... ......+.+ .++.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|+++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 8999999998776554443322 223344444 3568999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEEecCCCCCcc
Q 018784 284 SYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 284 ~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
+|+||+.||+|++||+...+..
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCCCcee
Confidence 9999999999999998765543
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.8e-40 Score=317.10 Aligned_cols=275 Identities=30% Similarity=0.518 Sum_probs=234.2
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
+.||..+|.+++|+| ++.+|++++.|+++++|+.. ++.+..+.+|...|.+++++|++.++++++.||.|++||..
T Consensus 299 ~~~h~~~v~~~~~~~---~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~ 374 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 374 (577)
T ss_dssp ECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EecCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence 479999999999986 99999999999999999975 45567889999999999999999999999999999999964
Q ss_pred CCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 92 TGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 92 ~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
++....+ .|...|.+++|+|++++|++++.|+.|++||... ........|...+.+++|++ ++.++++++.|++|
T Consensus 375 -~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 375 -GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSP-DDQTIASASDDKTV 450 (577)
T ss_dssp -CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred -CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECC-CCCEEEEEcCCCEE
Confidence 4444444 5889999999999999999999999999999642 23345567888999999986 55678889999999
Q ss_pred EEEECCCCceeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEec
Q 018784 171 RLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGG 247 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~ 247 (350)
++||. +++.+..+. +..++.+++|+|++++|+++ .|+.|++||. +.++++.+..+... ..+.+.| ++++|++++
T Consensus 451 ~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~ 527 (577)
T 2ymu_A 451 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASAS 527 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEE
T ss_pred EEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEEEE
Confidence 99996 455556655 46789999999999988765 6889999995 55666666655444 3445555 689999999
Q ss_pred CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 248 EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 248 ~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
.|+.|++||. +++.+..+.+|.+.|++++|+||+++|+|++.|++|++||
T Consensus 528 ~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 528 DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999995 6888899999999999999999999999999999999997
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-41 Score=314.46 Aligned_cols=286 Identities=19% Similarity=0.197 Sum_probs=223.8
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCce--eeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEe
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLW 88 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~--~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vW 88 (350)
..+|...|++|+|+|. ++.+||+|+.||+|+|||+.+++. ...+.+|.+.|++++|+| ++.+|+|+|.||+|++|
T Consensus 115 ~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 115 AAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4689999999999983 456999999999999999877654 456779999999999997 68999999999999999
Q ss_pred eCCCCCeeeeee---ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 89 DALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 89 d~~~~~~~~~~~---h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
|+.++....... +...+.+++|+|++.+|++|+.|+.|++||+... .......|...|.+++|.+.+..++++|+
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceEEEEec
Confidence 997665443332 2345789999999999999999999999998643 23345678889999999988888999999
Q ss_pred CCCeEEEEECCCCceeEee----cCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC-------Ccee
Q 018784 166 DSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-------TESA 233 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~-------~~~~ 233 (350)
.|++|++||+++.+....+ .+..+|++++|+|++++|+++ .|+.|++||++++.....+..+.. ....
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 9999999999887644333 345789999999999887654 689999999998776554432211 1122
Q ss_pred EecCCCCcEEEEe------------cCCCeEEEEEcccCeeEEeec-CCCcCEEEE-EEcCCCCEEEEecCCCcEEEecC
Q 018784 234 SLEPKLGNIFIAG------------GEDMWVHVFDFHTGEQIGCNK-GHHGPVHCV-RFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 234 ~~~~~~~~~l~sg------------~~d~~i~v~d~~~~~~~~~~~-~h~~~v~~l-~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
.+.+. +.+++++ ..++.|++||..+++.+..+. +|...|.++ +|+|+|.+|++|+ |+.|+||++
T Consensus 351 ~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 351 AWHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp EECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred EEcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 23332 3333333 245679999999999888764 688889887 6999999999887 889999998
Q ss_pred CCCC
Q 018784 300 NPPN 303 (350)
Q Consensus 300 ~~~~ 303 (350)
...+
T Consensus 429 ~~gk 432 (435)
T 4e54_B 429 QEAR 432 (435)
T ss_dssp C---
T ss_pred CcCe
Confidence 6554
No 28
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-40 Score=290.00 Aligned_cols=284 Identities=17% Similarity=0.248 Sum_probs=240.4
Q ss_pred cceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEE
Q 018784 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (350)
Q Consensus 7 ~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~ 86 (350)
.....++||.++|.+++| | ++.+|++|+.|++|++||..+++....+.+|...|.+++|++++.++++++.||.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V---DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E---ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-c---CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 344557899999999999 5 888999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCC---eeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEE
Q 018784 87 LWDALTGD---EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILS 162 (350)
Q Consensus 87 vWd~~~~~---~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 162 (350)
+|++.... ....+ .|...|.++.| ++.+|++++.|+.|++||. .........|...+.++.|.+.++..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE---GSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET---TEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC---CcEEEecccCCCceeEEEEccCCCCEEE
Confidence 99986543 33333 58899999999 5779999999999999992 2233445668889999999987888899
Q ss_pred EEeCCCeEEEEECCCCceeEeec--CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCC-ceeEecCCC
Q 018784 163 SCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKL 239 (350)
Q Consensus 163 s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (350)
+++.|+.|++||.. +....+. +...+.+++++|++.+++++.++.|++||+++...+..+..+... ..+.+.+.
T Consensus 160 ~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~- 236 (313)
T 3odt_A 160 TASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN- 236 (313)
T ss_dssp EEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-
T ss_pred EEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC-
Confidence 99999999999944 4444444 567899999999999777888999999999998888877655443 44556653
Q ss_pred CcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCc
Q 018784 240 GNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNH 304 (350)
Q Consensus 240 ~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 304 (350)
+ .+++++.|+.|++||+.+++.+..+..|...|.+++|+|+++ +++++.||.|++|++...+.
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 4 689999999999999999999999999999999999999998 66799999999999875443
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.7e-40 Score=290.90 Aligned_cols=249 Identities=16% Similarity=0.243 Sum_probs=199.3
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC--CceeeeccCccCCeEEEEECC--CCcEEEEeeCCCeEE
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET--GDWIGTFEGHKGAVWSCCLDA--NALFSASGSADFTAK 86 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~--~~~~~~l~gH~~~V~~v~~~~--~~~~l~s~s~Dg~v~ 86 (350)
++.||.++|++++|+| +|++||+|+.|++|+||+... ++++.+|.+|.+.|++++|++ ++.+|+||+.|++|+
T Consensus 4 ~~~~h~~~V~~~~~s~---~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDY---YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp ECCSCSSCEEEEEECT---TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eccCCcCceEEEEECC---CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4689999999999986 999999999999999999864 467889999999999999976 389999999999999
Q ss_pred EeeCCCCC--eeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCC-CCeeecCCCCcEEEEEEeCCC---
Q 018784 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSD--- 157 (350)
Q Consensus 87 vWd~~~~~--~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~--- 157 (350)
+||+.++. ....+ .|...|.+++|+|+ +.+|++++.|++|++||+..... .......|...+.+++|++..
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998764 33333 48889999999997 88999999999999999976532 234456788899999998752
Q ss_pred ---------CcEEEEEeCCCeEEEEECCCCc----eeEeecC-CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeee
Q 018784 158 ---------QTILSSCTDSGGVRLWDARSGK----IVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKG 223 (350)
Q Consensus 158 ---------~~~~~s~~~dg~i~iwd~~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~ 223 (350)
+.++++|+.|++|++||+++++ ....+.. ...|.+++|+|++.
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~----------------------- 217 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL----------------------- 217 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-----------------------
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCC-----------------------
Confidence 4689999999999999998765 4445553 45788888888630
Q ss_pred eecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe---eEEee--cCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 224 YNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE---QIGCN--KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~---~~~~~--~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
.+.+|++|+.|++|++||+.++. ....+ ..|...|++++|+|++++||+++.|+.|+||+
T Consensus 218 ---------------~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 218 ---------------LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp ---------------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred ---------------CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 12445555555555555554421 11122 46788999999999999999999999999998
Q ss_pred CC
Q 018784 299 TN 300 (350)
Q Consensus 299 ~~ 300 (350)
..
T Consensus 283 ~~ 284 (297)
T 2pm7_B 283 EN 284 (297)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.7e-40 Score=297.35 Aligned_cols=285 Identities=13% Similarity=0.176 Sum_probs=237.1
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc--eeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEe
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~--~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vW 88 (350)
++..|.++|.+++|+| +|++||+|+.|++|+||+..+++ .+..+.+|...|.+++|++++.++++++.||.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK---DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECT---TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECC---CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 4577999999999986 99999999999999999999887 888999999999999999999999999999999999
Q ss_pred eCCCCCeeee---eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCC---CCeeecCCCCcEEEEEEeCCCCcEEE
Q 018784 89 DALTGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA---PPREVGNSSGSIRTVAWLHSDQTILS 162 (350)
Q Consensus 89 d~~~~~~~~~---~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~ 162 (350)
|+.+++.... ..|...|.+++|+|++++|++++.|+.|++||+..... .......|...+.+++|.+ ++.+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~ 158 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLA 158 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEE
Confidence 9988764333 35888999999999999999999999999999976542 1223356788999999986 556788
Q ss_pred EEeCCCeEEEEECC------------------CCceeEeec-CCCCeEEEEEecCCcEEEE-EcCCcEEEEECCCcceee
Q 018784 163 SCTDSGGVRLWDAR------------------SGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVK 222 (350)
Q Consensus 163 s~~~dg~i~iwd~~------------------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~vwd~~~~~~~~ 222 (350)
+++.|+.|++||++ .++.+..+. +...+.+++|+|+++++++ +.++.|++||+++.+.+.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 88999999999954 567777775 4567999999999987765 468899999999988888
Q ss_pred eeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEccc--Cee--------------------------------E----
Q 018784 223 GYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHT--GEQ--------------------------------I---- 263 (350)
Q Consensus 223 ~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~--~~~--------------------------------~---- 263 (350)
.+..+... ..+.+.+ ++.++++| .|+.|++|++.+ +.. .
T Consensus 239 ~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 239 TLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp EEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred EEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcc
Confidence 77765433 4455555 46777777 899999999987 421 0
Q ss_pred --Eee-cCCCcCEEEEEEc-CCC---CEEEEecCCCcEEEecCCC
Q 018784 264 --GCN-KGHHGPVHCVRFS-PGG---ESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 264 --~~~-~~h~~~v~~l~~s-p~~---~~lasgs~Dg~v~vw~~~~ 301 (350)
..+ .+|..+|++++|+ +++ .+|+||+.||.|++|++..
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 223 4899999999966 666 9999999999999999754
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4e-39 Score=287.51 Aligned_cols=282 Identities=16% Similarity=0.188 Sum_probs=236.7
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeee---cc--CccCCeEEEEECCCCcEEEEeeCCCe
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT---FE--GHKGAVWSCCLDANALFSASGSADFT 84 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~---l~--gH~~~V~~v~~~~~~~~l~s~s~Dg~ 84 (350)
+...+|..+|.+++|+| ++++|++++ |+++++|+..+++.... +. +|...|.+++|++++.++++++.||.
T Consensus 45 ~~~~~h~~~v~~~~~~~---~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISN---PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EEEECCSSCCCEEEECS---SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred ceeccCCCceEEEEEec---CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 33468999999999986 999999999 99999999987654333 32 79999999999999999999999999
Q ss_pred EEEeeCCCCC--eeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEE
Q 018784 85 AKLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTIL 161 (350)
Q Consensus 85 v~vWd~~~~~--~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (350)
|++||+.+++ ....+ .|...|.+++|+|++++|++++.|+.|++||+.+... ......|...+.+++|++ ++..+
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l 198 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISN-DGTKL 198 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce-eeeeecccCceEEEEECC-CCCEE
Confidence 9999998876 33333 4788899999999999999999999999999986543 334456788999999986 55677
Q ss_pred EEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCC
Q 018784 162 SSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLG 240 (350)
Q Consensus 162 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
++++.|+.|++||+++++.+..+....++.+++|+|++++++++ .++.|++||+++...............+.+.+ ++
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 277 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY-CG 277 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT-TS
T ss_pred EEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC-CC
Confidence 88899999999999999999888888999999999999887765 57899999998876543332233344555655 57
Q ss_pred cEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 241 NIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 241 ~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
++|++++.|+.|++||+.+++.+.. ..|...|.+++|+|++++|++++.||.|++|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 8999999999999999999887743 458889999999999999999999999999986
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.6e-40 Score=301.24 Aligned_cols=270 Identities=20% Similarity=0.346 Sum_probs=226.1
Q ss_pred eeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECC
Q 018784 54 IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (350)
Q Consensus 54 ~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~ 132 (350)
...+.+|.++|++++|+|++.+++||+.||+|++||+.+++....+ .|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4578899999999999999999999999999999999998877766 489999999999999999999999999999997
Q ss_pred CCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-CCeEEEEEecCCcEEEEE-cCCcE
Q 018784 133 RPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTA-DGSSV 210 (350)
Q Consensus 133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~-~~~~i 210 (350)
+... ......|...|.+++|.+ ++.++++|+.|++|++||+++++++..+..+ ..+..+.++|++.+++++ .|+.|
T Consensus 181 ~~~~-~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 181 GFEC-IRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp SSCE-EECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCce-eEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 6443 334466888999999986 4567889999999999999999998888754 579999999999987654 68999
Q ss_pred EEEECCCcceeeeeecCCCC-ceeEecCC-------------------CCcEEEEecCCCeEEEEEcccCeeEEeecCCC
Q 018784 211 KFWDANHFGLVKGYNMPCNT-ESASLEPK-------------------LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHH 270 (350)
Q Consensus 211 ~vwd~~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~ 270 (350)
++||+++..+...+..+... ..+.+.+. .+.+|++|+.|+.|++||+.++..+..+.+|.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 99999988777666544333 33444442 26789999999999999999999999999999
Q ss_pred cCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 271 ~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
.+|.+++|+|++++|++|+.|+.|++||+....... ....+...|.++.++|+|.
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~---------------~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK---------------TLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE---------------EEECCSSCEEEEEECSSSS
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE---------------EEcCCCCcEEEEEEcCCCC
Confidence 999999999999999999999999999986543322 2233455677888888774
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-40 Score=297.91 Aligned_cols=287 Identities=11% Similarity=0.196 Sum_probs=228.2
Q ss_pred eeccCCceeEEEecccCCCc-cEEEEEeCCCCeeEeeCCCCceeeeccC-----ccCCeEEEEECCC----CcEEEEeeC
Q 018784 12 CHGHSRPVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETGDWIGTFEG-----HKGAVWSCCLDAN----ALFSASGSA 81 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg-~~lasgs~d~~v~iw~~~~~~~~~~l~g-----H~~~V~~v~~~~~----~~~l~s~s~ 81 (350)
..||..+|++++|+|.++++ ..+++++.++.|++|+..+++.+..+.. |...|.+++|+++ +.++++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 35999999999999854444 3455556667999999998888777765 5577999999998 679999999
Q ss_pred CCeEEEeeCCCCCeeeeee-ccccEeEEEEcC-CCCeEEEeeCCCeEEEEECCCCCCCCeee--cCCCCcEEEEEEeCCC
Q 018784 82 DFTAKLWDALTGDEKHSFE-HKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREV--GNSSGSIRTVAWLHSD 157 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~~-h~~~V~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~ 157 (350)
||.|++||+.+++....+. |...|.+++|+| ++.+|++++.|+.|++||+.+++...... ..|...+.+++|++ +
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 172 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-L 172 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-T
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-C
Confidence 9999999999998887775 999999999999 99999999999999999998654332221 46888999999986 5
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEeec-----------------------------CCCCeEEEEEecCCcEEEEEcCC
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTLE-----------------------------TKSPVTSAEVSRDGRYITTADGS 208 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~l~~~~~~ 208 (350)
+..+++++.|+.|++||+++++....+. +...+.+++|+ ...+++++.++
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~ 251 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCEN 251 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCC
Confidence 5678888999999999999876544333 55678999998 33444455689
Q ss_pred cEEEEECCCcce--------------eeeeecCCC-CceeEecCC-CCcEEEEecCCCeEEEEEcccCee----EEeecC
Q 018784 209 SVKFWDANHFGL--------------VKGYNMPCN-TESASLEPK-LGNIFIAGGEDMWVHVFDFHTGEQ----IGCNKG 268 (350)
Q Consensus 209 ~i~vwd~~~~~~--------------~~~~~~~~~-~~~~~~~~~-~~~~l~sg~~d~~i~v~d~~~~~~----~~~~~~ 268 (350)
.|++||+++... +..+..+.. ...+.+.+. .+++|++|+.|+.|++||+.+++. ...+.+
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH 331 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc
Confidence 999999887643 333333222 233344442 279999999999999999998753 446777
Q ss_pred C--CcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 269 H--HGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 269 h--~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
| ...|++++|+|++++|++|+.||.|++||+.
T Consensus 332 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 332 HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 7 7899999999999999999999999999974
No 34
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=295.25 Aligned_cols=294 Identities=21% Similarity=0.244 Sum_probs=241.2
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeecc-------------CccCCeEEEEECC-CCcE
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------------GHKGAVWSCCLDA-NALF 75 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~-------------gH~~~V~~v~~~~-~~~~ 75 (350)
.++++|.++|.+++|+| .++.+||+|+.|++|+||+..+++....+. +|...|.+++|++ ++.+
T Consensus 37 ~~~~~h~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 37 DVERIHGGGINTLDIEP--VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp EECCCCSSCEEEEEECT--TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeeeccCCcEEEEEEec--CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 34689999999999985 278899999999999999999877665543 6999999999999 7789
Q ss_pred EEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCC---CeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEE
Q 018784 76 SASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDT---HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (350)
Q Consensus 76 l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~---~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 152 (350)
+++++.||.|++||+.+++....+.+...+.++.++|.+ .++++++.|+.|++||+.++.. ......|...+.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeeecCCCCcEEEEE
Confidence 999999999999999999888888899999999999854 5999999999999999987654 344566888999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEECCCCc-eeEee----------------cCCCCeEEEEEecCCcEEEEE-cCCcEEEEE
Q 018784 153 WLHSDQTILSSCTDSGGVRLWDARSGK-IVQTL----------------ETKSPVTSAEVSRDGRYITTA-DGSSVKFWD 214 (350)
Q Consensus 153 ~~~~~~~~~~s~~~dg~i~iwd~~~~~-~~~~~----------------~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd 214 (350)
|.+.+..++++++.||.|++||++++. ++..+ .+...+.+++|+|++++++++ .++.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 998777789999999999999998765 33333 234679999999999877654 688999999
Q ss_pred CCCcceeeeeecC-----CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEec
Q 018784 215 ANHFGLVKGYNMP-----CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 215 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs 289 (350)
+++......+... ...............+++++.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 9887654433221 11122233333456778888899999999999999999999999999999999999999999
Q ss_pred CCCcEEEecCCCCCccc
Q 018784 290 EDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 290 ~Dg~v~vw~~~~~~~~~ 306 (350)
.||.|++|++...+...
T Consensus 354 ~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 354 RDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TTSCEEEEEECC-----
T ss_pred CCCeEEEEeCCCCCccC
Confidence 99999999998766543
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-39 Score=294.54 Aligned_cols=285 Identities=14% Similarity=0.192 Sum_probs=235.9
Q ss_pred eEeeccCCceeEEEecccCCCcc-EEEEEeCCCCeeEeeC----CCCc------eeeeccC----------ccCCeEEEE
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNG----ETGD------WIGTFEG----------HKGAVWSCC 68 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~----~~~~------~~~~l~g----------H~~~V~~v~ 68 (350)
+..+.|.++|.+++|+| +|. +||+|+.|+.+++|+. .+++ ....+.. |.+.|.+++
T Consensus 39 ~~~~~~~~~v~~~~~s~---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNP---LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEEEEECSCCSEEEECS---SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eeeeeccCceEEEEECC---CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 33467889999999997 898 9999999999999999 8887 4444444 788999999
Q ss_pred ECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC----------
Q 018784 69 LDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---------- 137 (350)
Q Consensus 69 ~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~---------- 137 (350)
|++++.+|++++.||.|++|| .++.....+ .|...|.+++|+|++++|++++.|+.|++||+.++...
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 999999999999999999999 555555555 48899999999999999999999999999998643211
Q ss_pred ---------------------------------------------CeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 138 ---------------------------------------------PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 138 ---------------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
......|...+.+++|++. +.++++++.|+.|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-NKLLLSASDDGTLRI 273 (425)
T ss_dssp -----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEE
T ss_pred cceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC-CCEEEEEcCCCEEEE
Confidence 1122356778999999864 557888899999999
Q ss_pred EECCCCceeEeec-CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCC
Q 018784 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDM 250 (350)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~ 250 (350)
||+++++.+..+. +...+.+++|+|++.+++++.++.|++||+++...+..+..+... ..+.+.+ ++++|++++.|+
T Consensus 274 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg 352 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDG 352 (425)
T ss_dssp ECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT-TSSEEEEEETTS
T ss_pred EECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC-CCCEEEEEECCC
Confidence 9999998888876 457899999999995566678999999999998888777664443 3445555 589999999999
Q ss_pred eEEEEEcccCe--------------------eEEeecCCCc--CEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 251 WVHVFDFHTGE--------------------QIGCNKGHHG--PVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 251 ~i~v~d~~~~~--------------------~~~~~~~h~~--~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
.|++||+.+++ .+..+.+|.. .|.+++|+|++++|++++.||.|++|++.
T Consensus 353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999888 8888999976 99999999999999999999999999974
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-40 Score=303.33 Aligned_cols=287 Identities=13% Similarity=0.143 Sum_probs=221.6
Q ss_pred cceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC--ceeeeccCccCCeEEEEECCCCcEEEEeeCCCe
Q 018784 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (350)
Q Consensus 7 ~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~--~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~ 84 (350)
..|.+.+.|.++|++++|+| +|++||+|+.|++|+||+..++ +.+..+.+|.+.|.+++|++++.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~v~~~~~s~---~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 2 ATSQVLHILPKPSYEHAFNS---QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp CCEEEEEECSSCCSCCEECS---SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSS
T ss_pred CcceeEecCCCcEEEEEECC---CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCe
Confidence 45667788899999999997 9999999999999999999988 788899999999999999999999999999999
Q ss_pred EEEeeCCCCC---eee-eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCC--CCeeecC-CCCcEEEEEEeCCC
Q 018784 85 AKLWDALTGD---EKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA--PPREVGN-SSGSIRTVAWLHSD 157 (350)
Q Consensus 85 v~vWd~~~~~---~~~-~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~--~~~~~~~-~~~~v~~~~~~~~~ 157 (350)
|++||+.++. ... ...|...|.+++|+|++++|++++.|+.|++||+..... ....... |...|.+++|++ +
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 157 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-N 157 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-T
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-C
Confidence 9999998876 333 346899999999999999999999999999999986653 2334444 889999999986 5
Q ss_pred CcEEEEEeCCCeEEEEECC------------------CCceeEeecCCCCeEEEEEecCCcEEEE-EcCCcEEEEECCCc
Q 018784 158 QTILSSCTDSGGVRLWDAR------------------SGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHF 218 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~vwd~~~~ 218 (350)
+.++++++.|++|++||++ .++++..+.+...+.+++|+|++++|++ +.|+.|++||+++.
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 6788899999999999985 3455556655678999999999987765 46899999999988
Q ss_pred ce----eeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCe-e------------------------------
Q 018784 219 GL----VKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGE-Q------------------------------ 262 (350)
Q Consensus 219 ~~----~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~-~------------------------------ 262 (350)
.. +..+..+... ..+.+.+ ++++|++|+.|+.+ +|+..... .
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (377)
T 3dwl_C 238 EQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPV 315 (377)
T ss_dssp TSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----
T ss_pred CCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccc
Confidence 76 5555554443 4455655 57888888877766 66654211 0
Q ss_pred --------EE-------------eecCCCcCEEEEEEcCCC-C---EEEEecCCCcEEEecC
Q 018784 263 --------IG-------------CNKGHHGPVHCVRFSPGG-E---SYASGSEDGTIRIWQT 299 (350)
Q Consensus 263 --------~~-------------~~~~h~~~v~~l~~sp~~-~---~lasgs~Dg~v~vw~~ 299 (350)
.. ....|...|+++++.+.. . .|+|||.||.|++||+
T Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 316 SFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00 012399999999976643 3 5999999999999985
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.2e-40 Score=299.48 Aligned_cols=289 Identities=22% Similarity=0.348 Sum_probs=232.7
Q ss_pred CCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEE
Q 018784 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLT 119 (350)
Q Consensus 41 ~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~s 119 (350)
..+..|+..+..+..+|.||.+.|++++|+|++.+|+|||.||+|+|||..+++....+ .|...|.+++|+|++++|++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE
Confidence 44567888888899999999999999999999999999999999999999988877766 48889999999999999999
Q ss_pred eeCCCeEEEEECCCCC------CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec------CC
Q 018784 120 GGFEKILRIFDLNRPD------APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE------TK 187 (350)
Q Consensus 120 g~~d~~v~vwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~------~~ 187 (350)
|+.|+.+++||+.... ........|.+.+.++.|.+.++..+++|+.|++|++||+++++.+..+. +.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999999986432 12234567888899999998877888999999999999999998887662 34
Q ss_pred CCeEEEEEec-CCcEEEE-EcCCcEEEEECCC-cceeeeeecCCC-CceeEecCCCCcEEEEecCCCeEEEEEcccCeeE
Q 018784 188 SPVTSAEVSR-DGRYITT-ADGSSVKFWDANH-FGLVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (350)
Q Consensus 188 ~~v~~~~~~~-~~~~l~~-~~~~~i~vwd~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~ 263 (350)
..+.++.+++ ++.++++ +.|+.|++||++. ...++.+..+.. ...+.+.| ++++|++|+.|++|++||+++++.+
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEE
Confidence 6799999986 6766654 5689999999984 355555554433 44556665 5899999999999999999999988
Q ss_pred EeecCCC-------cCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEc
Q 018784 264 GCNKGHH-------GPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHIN 336 (350)
Q Consensus 264 ~~~~~h~-------~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 336 (350)
..+..+. ..|++++|+|++++|++|+.||.|++||+...+..... ......+...|.++.++
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~-----------~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL-----------GTLQNSHEGRISCLGLS 353 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE-----------CCSCSSCCCCCCEEEEC
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE-----------ecccCCCCCceEEEEEC
Confidence 7765543 34899999999999999999999999998654432211 11113455667888888
Q ss_pred ccchh
Q 018784 337 KEGKA 341 (350)
Q Consensus 337 ~~g~~ 341 (350)
|||+.
T Consensus 354 ~dg~~ 358 (380)
T 3iz6_a 354 SDGSA 358 (380)
T ss_dssp SSSSE
T ss_pred CCCCE
Confidence 88763
No 38
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.9e-39 Score=287.15 Aligned_cols=273 Identities=19% Similarity=0.362 Sum_probs=226.2
Q ss_pred CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEE
Q 018784 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIF 129 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vw 129 (350)
.+...+|.+|.+.|++++|++++.+++||+.||+|++||..++.....+ .|...|.+++|+|++++|++|+.|+.|++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3456789999999999999999999999999999999999988877766 478889999999999999999999999999
Q ss_pred ECCCCCCC---CeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE
Q 018784 130 DLNRPDAP---PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA 205 (350)
Q Consensus 130 d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 205 (350)
++...... ......|.+.+.++.|.+++ .+++++.|++|++||+++++++..+.. ...+.+++|+|++++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 99765422 23346788899999997643 377888999999999999999888875 4689999999999887655
Q ss_pred -cCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--CCCcCEEEEEEcCC
Q 018784 206 -DGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--GHHGPVHCVRFSPG 281 (350)
Q Consensus 206 -~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~sp~ 281 (350)
.|+.|++||+++..++..+..+... ..+.+.| ++++|++|+.|+.|++||+++++.+..+. .+...|.+++|+|+
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 6899999999998888777655443 4455655 58999999999999999999988776654 34457999999999
Q ss_pred CCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccchh
Q 018784 282 GESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 282 ~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~ 341 (350)
+++|++|+.|+.|++||+....... ....+...|.++.++|||+.
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~---------------~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAG---------------VLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEE---------------EEECCSSCEEEEEECTTSSC
T ss_pred CCEEEEECCCCeEEEEEcccCcEee---------------EeecCCCcEEEEEEcCCCCE
Confidence 9999999999999999986544322 22345566888888888863
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-40 Score=305.93 Aligned_cols=287 Identities=16% Similarity=0.222 Sum_probs=238.4
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC----CceeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEE
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAK 86 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~----~~~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~ 86 (350)
..+|..+|.+++|+| ++.+|++|+.|++|++|+..+ .+.+..+.+|...|.+++|+++ +.++++++.||.|+
T Consensus 63 ~~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSH---NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CCCCSSCEEEEEECS---SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred EEecCCceEEEEECC---CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 347999999999986 999999999999999999987 4588899999999999999998 89999999999999
Q ss_pred EeeCCCCC------eeee----eeccccEeEEEEcCC-CCeEEEeeCCCeEEEEECCCCCCCCeeecC-----CCCcEEE
Q 018784 87 LWDALTGD------EKHS----FEHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREVGN-----SSGSIRT 150 (350)
Q Consensus 87 vWd~~~~~------~~~~----~~h~~~V~~~~~~~~-~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~-----~~~~v~~ 150 (350)
+||+.++. .... ..|...|.+++|+|+ +.+|++++.|+.|++||+............ |...+.+
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 99998776 3332 258889999999999 789999999999999999865433222222 1678999
Q ss_pred EEEeCCCCcEEEEEeCCC---eEEEEECCCC-ceeEeec--CCCCeEEEEEec-CCcEEEE-EcCCcEEEEECCCcceee
Q 018784 151 VAWLHSDQTILSSCTDSG---GVRLWDARSG-KIVQTLE--TKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHFGLVK 222 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg---~i~iwd~~~~-~~~~~~~--~~~~v~~~~~~~-~~~~l~~-~~~~~i~vwd~~~~~~~~ 222 (350)
++|++.+..++++++.|+ .|++||++++ +++..+. +...+.+++|+| +++++++ +.++.|++||+++.+.+.
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 999987778899999998 9999999986 5666665 567899999999 7877665 468999999999988887
Q ss_pred eeecCCC-CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEee-----------------------------------
Q 018784 223 GYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCN----------------------------------- 266 (350)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~----------------------------------- 266 (350)
.+..+.. ...+.+.+..+.+|++++.|+.|++||+.++......
T Consensus 300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 7765443 4566677754489999999999999999876532221
Q ss_pred cCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 267 ~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
..|..++.+++|+|+|++|++|+.|+.|+||++.+
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 11677888999999999999999999999999864
No 40
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=286.21 Aligned_cols=272 Identities=20% Similarity=0.338 Sum_probs=222.9
Q ss_pred CceeeeccCccCCeEEEEECCC----CcEEEEeeCCCeEEEeeCCCCCeee--ee-eccccEeEEEEcCCCCeEEEeeCC
Q 018784 51 GDWIGTFEGHKGAVWSCCLDAN----ALFSASGSADFTAKLWDALTGDEKH--SF-EHKHIVRACAFSEDTHLLLTGGFE 123 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~----~~~l~s~s~Dg~v~vWd~~~~~~~~--~~-~h~~~V~~~~~~~~~~~l~sg~~d 123 (350)
+...+.+.+|.+.|++++|+++ +.+++|||.|++|+||+........ .+ .|...|.+++|+|++.++++++.|
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 3445678899999999999874 6799999999999999987665332 33 589999999999999999999999
Q ss_pred CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEE
Q 018784 124 KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYI 202 (350)
Q Consensus 124 ~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 202 (350)
++|++||+.++... .....+...+.+++|+| ++.++++++.|++|++||+++++....+.. ...+.+++|+|++++|
T Consensus 102 ~~i~lWd~~~~~~~-~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 102 AHIRLWDLENGKQI-KSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp SEEEEEETTTTEEE-EEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CcEEEEECCCCCEE-EEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 99999999865433 33445666788899875 566788899999999999999988777765 4579999999999988
Q ss_pred EEE-cCCcEEEEECCCcceeeeeecCCC-CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC
Q 018784 203 TTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 203 ~~~-~~~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp 280 (350)
+++ .++.|++||+++.+.+..+..+.. ...+.+.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 765 589999999999888877765443 34556665 588999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 281 GGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 281 ~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
++++|++|+.|++|++||+...... .....+...|.++.++|+|+
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~---------------~~~~~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCV---------------HTFFDHQDQVWGVKYNGNGS 303 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEE---------------EEECCCSSCEEEEEECTTSS
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEE---------------EEEcCCCCcEEEEEECCCCC
Confidence 9999999999999999998654332 22334555677888888875
No 41
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=301.16 Aligned_cols=278 Identities=18% Similarity=0.271 Sum_probs=226.7
Q ss_pred cCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc-----------eeeeccCcc------------CCeEEEEECC
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----------WIGTFEGHK------------GAVWSCCLDA 71 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~-----------~~~~l~gH~------------~~V~~v~~~~ 71 (350)
|.++|++++|+| +|.+||+|+.|+.|+||+..+++ +...+.+|. +.|.+++|++
T Consensus 27 ~~~~V~~v~~s~---~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 27 EADIISTVEFNH---SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGGSEEEEEECS---SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccCcEEEEEECC---CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 678999999997 99999999999999999998876 578899998 8899999999
Q ss_pred CC--cEEEEeeCCCeEEEeeCCCCCee---------------------------------------ee--eeccccEeEE
Q 018784 72 NA--LFSASGSADFTAKLWDALTGDEK---------------------------------------HS--FEHKHIVRAC 108 (350)
Q Consensus 72 ~~--~~l~s~s~Dg~v~vWd~~~~~~~---------------------------------------~~--~~h~~~V~~~ 108 (350)
++ .++++++.|++|++||+.++... .. ..|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 79999999999999998654321 11 2588899999
Q ss_pred EEcCCCCeEEEeeCCCeEEEEECCCCCCCCe-------eecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce-
Q 018784 109 AFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-------EVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI- 180 (350)
Q Consensus 109 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~- 180 (350)
+|+|++++|++| .|+.|++||+........ ....|...|.+++|++.+..++++|+.|++|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999974322111 24567889999999876658899999999999999999886
Q ss_pred ---eEeecCCC-------------CeEEEEEecCCcEEEEEcCCcEEEEECCC-cceeeeeecCCCCce-----------
Q 018784 181 ---VQTLETKS-------------PVTSAEVSRDGRYITTADGSSVKFWDANH-FGLVKGYNMPCNTES----------- 232 (350)
Q Consensus 181 ---~~~~~~~~-------------~v~~~~~~~~~~~l~~~~~~~i~vwd~~~-~~~~~~~~~~~~~~~----------- 232 (350)
+..+..+. .+.+++|+|++++|+++.++.|++||+++ ..++..+..+.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 56666553 89999999999998887669999999987 666666655432211
Q ss_pred -----eEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec---------------------------------CCCcCEE
Q 018784 233 -----ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK---------------------------------GHHGPVH 274 (350)
Q Consensus 233 -----~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~---------------------------------~h~~~v~ 274 (350)
+.+.+ ++++|++|+.|+.|++||+.+++.+. +. .+...|.
T Consensus 343 ~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 343 FDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred ccceEEEECC-CCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 55665 57899999999999999999887653 22 2345789
Q ss_pred EEEEcCCCCEEEEecCCCcEEEecC
Q 018784 275 CVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 275 ~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
+++|+|++.+||+++.++ +++|..
T Consensus 421 ~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEEECCCCCEEEEEecce-eeeecc
Confidence 999999999999999886 777754
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=278.41 Aligned_cols=277 Identities=17% Similarity=0.248 Sum_probs=224.2
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeec--cCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF--EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l--~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
+.++|+||+ ++ +||+|. |++|+|||.++++++..+ .+|...|.+++|++++++++||+.||+|++||+.+++.
T Consensus 27 y~~~l~WS~---~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 27 YLNLVDWSS---GN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp TCBCEEECT---TS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cceEEEECC---CC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 457788875 54 777764 999999999999988766 46888899999999999999999999999999999987
Q ss_pred eeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEE
Q 018784 96 KHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (350)
Q Consensus 96 ~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd 174 (350)
+..+ .|...+.++ ++++..+++++.++.+++|+.............|...+..+.+.+ ++.++++++.|++|++||
T Consensus 102 ~~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 102 LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEE
Confidence 7766 477666655 455678999999999999998866655556677888899988875 556788999999999999
Q ss_pred CCCCcee-----EeecCCCCeEEEEEecCCc-EEE--EE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEE-
Q 018784 175 ARSGKIV-----QTLETKSPVTSAEVSRDGR-YIT--TA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI- 244 (350)
Q Consensus 175 ~~~~~~~-----~~~~~~~~v~~~~~~~~~~-~l~--~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 244 (350)
+++++.. ........+..+.+.|++. ++. ++ .++.|++||.+..................+.+....+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 258 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISG 258 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEE
Confidence 9987532 2223456789999998764 332 22 467899999998877776666555566667665444443
Q ss_pred EecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 245 AGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 245 sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
+|+.|+.|++||+.+++++..+.+|.+.|++|+|+|++++|||||.||+|+|||+...
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 3558999999999999999999999999999999999999999999999999998543
No 43
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.2e-39 Score=318.46 Aligned_cols=292 Identities=19% Similarity=0.225 Sum_probs=251.7
Q ss_pred ccceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeE
Q 018784 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (350)
Q Consensus 6 ~~~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v 85 (350)
+.....+.+|+++|.+++|+| +|.+||+|+.|++|+|||..+++.+..+.+|.+.|.+++|+|++.++++++.||.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp---~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cccceeeecCCCceEEEEECC---CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 344555689999999999987 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCeeeeee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 86 KLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 86 ~vWd~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
++||..+++....+. |...|.+++|+|++.+|++++.|++|++||+............|...+.+++|++.++..++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 999999998877765 8999999999999999999999999999999765444455567888999999998677889999
Q ss_pred eCCCeEEEEECCCCceeEeecCC--CCeEEEEEec--CCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCc-eeEecCC
Q 018784 165 TDSGGVRLWDARSGKIVQTLETK--SPVTSAEVSR--DGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPK 238 (350)
Q Consensus 165 ~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~ 238 (350)
+.||+|++||+++++....+..+ .++..++|+| ++.+++++ .++.|++||+++...+..+..+.... .+.+.+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~- 238 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP- 238 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-
Confidence 99999999999988776666543 7899999998 88877665 57899999999988887776554443 445555
Q ss_pred CCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC--EEEEecCCCcEEEecCCCC
Q 018784 239 LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE--SYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 239 ~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~--~lasgs~Dg~v~vw~~~~~ 302 (350)
++.++++++.|+.|++||+.+++.+..+..|...|++++|+|++. +++++ .|+.+.+|++...
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGND 303 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCC
Confidence 578999999999999999999999999999999999999999987 35554 4667888887543
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.8e-38 Score=292.26 Aligned_cols=278 Identities=18% Similarity=0.268 Sum_probs=229.4
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeec--cCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF--EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l--~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
++..|+|++ + .+||+|. |++|+|||..+++++..+ .+|...|++|+|++++.+||+|+.||+|+|||+.+++.
T Consensus 107 y~~~l~wS~---~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSS---G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECT---T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cceeEEECC---C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence 466677774 3 4788775 999999999999987755 57888999999999999999999999999999999987
Q ss_pred eeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEE
Q 018784 96 KHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (350)
Q Consensus 96 ~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd 174 (350)
+..+ .|...+.++.++ +.+|++|+.|+.+++||.............|...+..+.+.+ ++..+++++.|+.+++||
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeeccccceEEe
Confidence 7766 588888887764 678999999999999999866555556677888899998875 566788999999999999
Q ss_pred CCCCce----eE-eecCCCCeEEEEEecCC-cEEEEE---cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEE
Q 018784 175 ARSGKI----VQ-TLETKSPVTSAEVSRDG-RYITTA---DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA 245 (350)
Q Consensus 175 ~~~~~~----~~-~~~~~~~v~~~~~~~~~-~~l~~~---~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (350)
..+++. +. ...+...|..++|+|.+ .+++++ .|+.|++||++++.+...+..+.......+.+....++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISG 338 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEE
Confidence 987653 22 23345789999999965 455432 4789999999999988888777666677777654444433
Q ss_pred -ecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 246 -GGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 246 -g~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
|+.|+.|++||+.+++++..+.+|.+.|++|+|+|++++|+|||.|++|+|||+....
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 4479999999999999999999999999999999999999999999999999986543
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-40 Score=311.74 Aligned_cols=285 Identities=14% Similarity=0.105 Sum_probs=211.1
Q ss_pred cCCceeEEEecccC-------------------------CCccEEEEEeCCCCeeEeeCCCCcee----eeccCccCCeE
Q 018784 15 HSRPVVDLFYSPIT-------------------------PDGFFLVSASKDSSPMLRNGETGDWI----GTFEGHKGAVW 65 (350)
Q Consensus 15 H~~~v~~~~~~~~s-------------------------~dg~~lasgs~d~~v~iw~~~~~~~~----~~l~gH~~~V~ 65 (350)
+.++|++|+|+|.. |++.++|++|.|++|+||+..+++.. .++.+|.+.|+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 46678888887743 22233445668899999998877642 45778899999
Q ss_pred EEEECCC------CcEEEEeeCCCeEEEeeCCCCCee-----------eee-eccccEeEEEEcCCCCeEEEeeCCCeEE
Q 018784 66 SCCLDAN------ALFSASGSADFTAKLWDALTGDEK-----------HSF-EHKHIVRACAFSEDTHLLLTGGFEKILR 127 (350)
Q Consensus 66 ~v~~~~~------~~~l~s~s~Dg~v~vWd~~~~~~~-----------~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~ 127 (350)
.++|+|+ +.+|||++.||+|++||+.++... ..+ .|...|.+++|+|++ .|++|+.|++|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE
Confidence 9999986 579999999999999999765421 123 478899999999864 799999999999
Q ss_pred EEECCCCCCCCeeecCCCCcEEEEE-EeCCCC-cEEEEEeCCCeEEEEECCCCceeEeecCC---CCeEEEEEecCCcEE
Q 018784 128 IFDLNRPDAPPREVGNSSGSIRTVA-WLHSDQ-TILSSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYI 202 (350)
Q Consensus 128 vwd~~~~~~~~~~~~~~~~~v~~~~-~~~~~~-~~~~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l 202 (350)
+||+.++..+......|...|.+++ ..++++ .++++|+.|++|+|||+++++++..+..+ ..+.+++|+|+++.+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 9999876555555677899999995 345555 89999999999999999998766555432 247889999998877
Q ss_pred EEE-cCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEccc---------------------
Q 018784 203 TTA-DGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHT--------------------- 259 (350)
Q Consensus 203 ~~~-~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~--------------------- 259 (350)
+++ .+++|++||+++..++..+..+... ..+.+.| ++++|++|+.|++|++||+..
T Consensus 371 ~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v 449 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKW 449 (524)
T ss_dssp EEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEEC
T ss_pred EEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEe
Confidence 655 5789999999998776665554433 4555655 688999999999999987421
Q ss_pred -----------------------CeeEEeecCCCcCEEEEEEcCCCC---EEEEecCCCcEEEecCCC
Q 018784 260 -----------------------GEQIGCNKGHHGPVHCVRFSPGGE---SYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 260 -----------------------~~~~~~~~~h~~~v~~l~~sp~~~---~lasgs~Dg~v~vw~~~~ 301 (350)
+..+..+.+|..+|++++|+|+++ .+|+|+.||.|+||++.-
T Consensus 450 ~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 450 DYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp BCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 111223457889999999999964 899999999999999754
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-39 Score=300.08 Aligned_cols=280 Identities=14% Similarity=0.171 Sum_probs=223.1
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC---Cc---eeeeccCccCCeEEEEECCCCcEEEEeeCCCeEE
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET---GD---WIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~---~~---~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~ 86 (350)
.+|.++|++++|+| .++.+||+|+.|++|+|||..+ +. ....+ +|...|.+++|++++.++++++.||+|+
T Consensus 60 ~~h~~~V~~~~~s~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSP--GETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEEC--SSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECC--CCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 78999999999984 2788999999999999999866 43 22233 5999999999999999999999999999
Q ss_pred EeeCC---CCCeeeeee-------------ccccEeEEE--EcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecC-CCCc
Q 018784 87 LWDAL---TGDEKHSFE-------------HKHIVRACA--FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN-SSGS 147 (350)
Q Consensus 87 vWd~~---~~~~~~~~~-------------h~~~V~~~~--~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~-~~~~ 147 (350)
+||+. +++...... +...+.++. +++++.+|++|+.|+.|++||+.+.......... |.+.
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~ 216 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGA 216 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCc
Confidence 99984 554433322 344566666 5678999999999999999999876544333332 7789
Q ss_pred EEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec--CCCCeEEEEEe----cCCcEEEEE-cCCcEEEEECCCcce
Q 018784 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVS----RDGRYITTA-DGSSVKFWDANHFGL 220 (350)
Q Consensus 148 v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~----~~~~~l~~~-~~~~i~vwd~~~~~~ 220 (350)
|.+++|++ ++.++++|+.||+|++||+++++++..+. +..++.+++++ +++.+++++ .|+.|++||+++..+
T Consensus 217 v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 217 VSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred eEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 99999975 47788899999999999999999988774 45689999665 467677666 578999999998887
Q ss_pred eeeeecCCC---------------------------CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC-----
Q 018784 221 VKGYNMPCN---------------------------TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG----- 268 (350)
Q Consensus 221 ~~~~~~~~~---------------------------~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~----- 268 (350)
+..+..+.. ...+.+. .+++|++|+.|+.|++||+.+++....+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 373 (437)
T 3gre_A 296 QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFS 373 (437)
T ss_dssp EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CC
T ss_pred EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEEecccccC
Confidence 766653211 1223333 458999999999999999998887666554
Q ss_pred --------------------------------CCcCEEEEEEcCC--CCEEEEecCCCcEEEec
Q 018784 269 --------------------------------HHGPVHCVRFSPG--GESYASGSEDGTIRIWQ 298 (350)
Q Consensus 269 --------------------------------h~~~v~~l~~sp~--~~~lasgs~Dg~v~vw~ 298 (350)
|...|++++|+++ +.+|+||+.||.|+||+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 374 DVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999988 78999999999999995
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.5e-40 Score=291.91 Aligned_cols=250 Identities=18% Similarity=0.230 Sum_probs=192.2
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc--eeeeccCccCCeEEEEECC--CCcEEEEeeCCCeEE
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDA--NALFSASGSADFTAK 86 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~--~~~~l~gH~~~V~~v~~~~--~~~~l~s~s~Dg~v~ 86 (350)
++.||+++|++++|+| +|++||+||.|++|+|||+.+++ ++.+|.+|.+.|++++|++ ++.+|+||+.|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~---~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY---YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECG---GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ecccccCeEEEeeEcC---CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 4579999999999997 99999999999999999998764 5678999999999999975 489999999999999
Q ss_pred EeeCCCCC--eeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCCC--CeeecCCCCcEEEEEEeCCC--
Q 018784 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHSD-- 157 (350)
Q Consensus 87 vWd~~~~~--~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~-- 157 (350)
+||+.++. ....+ .|...|.+++|+|+ +.+|++|+.|++|++||+...... ......|...+.+++|.+..
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998764 33333 58899999999998 789999999999999998754221 22335677788889888652
Q ss_pred --------------CcEEEEEeCCCeEEEEECCCC---ceeEeecC-CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcc
Q 018784 158 --------------QTILSSCTDSGGVRLWDARSG---KIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFG 219 (350)
Q Consensus 158 --------------~~~~~s~~~dg~i~iwd~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~ 219 (350)
+.++++|+.|++|++||++.+ +++..+.. ...|.+++|+|++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~------------------ 226 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL------------------ 226 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSC------------------
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCC------------------
Confidence 357889999999999999755 34555553 457888888886400
Q ss_pred eeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccC---e-eEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEE
Q 018784 220 LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG---E-QIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIR 295 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~---~-~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~ 295 (350)
.+.+|++|+.|++|++||+.+. . ....+..|...|++++|+|++++||+|+.|+.|+
T Consensus 227 -------------------~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 227 -------------------PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp -------------------SCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred -------------------CCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 1245556666666666665442 1 1123456888999999999999999999999999
Q ss_pred EecCC
Q 018784 296 IWQTN 300 (350)
Q Consensus 296 vw~~~ 300 (350)
||+..
T Consensus 288 lw~~~ 292 (316)
T 3bg1_A 288 LWKES 292 (316)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99864
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-39 Score=296.97 Aligned_cols=310 Identities=15% Similarity=0.175 Sum_probs=242.6
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeee
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~ 97 (350)
.++.++|+| +|.+|++|+.|+++++|+..+++....+.+| ..+....+++++.++++|+.||.|++||+.++....
T Consensus 58 ~~~~~~~s~---~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 58 AGKGNTFEK---VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp CCTTCEEEE---EETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE
T ss_pred cccceeeee---cCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee
Confidence 344788887 9999999999999999999998888888877 444555789999999999999999999999888777
Q ss_pred ee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECC
Q 018784 98 SF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR 176 (350)
Q Consensus 98 ~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~ 176 (350)
.+ .|...|.+++|+|++++|++|+.|++|++||+.++... .....|...|.+++|++ ++.++++++.|++|++||++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP-RTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC-EEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc-eEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC
Confidence 75 69999999999999999999999999999999876544 44567889999999986 46677899999999999999
Q ss_pred CCceeEeecC----CCCeEEEE---------------------EecCCcEEEEE-cCCcEEEEECCCcceeeeeecC--C
Q 018784 177 SGKIVQTLET----KSPVTSAE---------------------VSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP--C 228 (350)
Q Consensus 177 ~~~~~~~~~~----~~~v~~~~---------------------~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~--~ 228 (350)
+++.+..+.. ...+.++. |+|++++++++ .++.|++||+++...+..+... .
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 9998888763 23444444 46788877655 6889999999988776665432 2
Q ss_pred CCceeEecCCCCcEEEEecCCCeEEEEEcccCee-EEeecC-CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCccc
Q 018784 229 NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ-IGCNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 229 ~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~-~~~~~~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~ 306 (350)
....+.+.+....+|++|+.|+.|++||+++++. +..+.+ |...|.++.+ |++.+|++++.|+.|++|++..+....
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~ 370 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESER 370 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCS
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCc
Confidence 3445666665444999999999999999998754 666665 6777888865 577899999999999999987643322
Q ss_pred CCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 307 NHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
....... ......+...|..+.++|+|+
T Consensus 371 ~~~~~~~------~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 371 PAIEFET------PTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp CEECTTS------CEEECCSSCCCCEEEEECCSS
T ss_pred cceeccC------ccEEccCCcceEEEEEccCCC
Confidence 1111000 011223455677888888887
No 49
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-39 Score=321.47 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=178.3
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
..||.+.|++++|+| +|++||+|+.|++|+||+..+.+....+. |...|.+++|++ +.+|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafsp---dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF---TQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEET---TTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECC---CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 369999999999997 99999999999999999998887766654 888999999999 8899999999999999999
Q ss_pred CCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC----------eeecCCCCcEEEEEEeCCCCcEE
Q 018784 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP----------REVGNSSGSIRTVAWLHSDQTIL 161 (350)
Q Consensus 92 ~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~ 161 (350)
+++.+..+.|...|.+++|+|++++|++|+.|++|++||+.+..... .....|.+.|.+++|+|.+...+
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99988888888999999999999999999999999999998654311 12245778999999998777788
Q ss_pred EEEeCCCeEEEEECCCCceeEeecCC-------------------CCeEEEEEecCCcEEEEE-cCCcEEEEECCCccee
Q 018784 162 SSCTDSGGVRLWDARSGKIVQTLETK-------------------SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLV 221 (350)
Q Consensus 162 ~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~ 221 (350)
++|+.|++| +||+++++++..+..+ ..|.+++|+|+|++|+++ .|+.|++||+++.+++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 899999999 9999999988877654 579999999999987665 6899999999876654
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.6e-38 Score=280.07 Aligned_cols=304 Identities=18% Similarity=0.273 Sum_probs=248.1
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~ 93 (350)
-|.++|.+++|+| ||++++++..++.+.+|............+|.+.|.+++|++++.++++++ ||.|++||+.++
T Consensus 7 ~~~~~v~~~~~s~---dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 7 MGSKPAYSFHVTA---DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EEEEECCEEEECS---SSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred ccCCceeEEEECC---CCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 4677899999987 999999998888887776655444445558999999999999999999998 999999999876
Q ss_pred Ceee---ee---eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC-CeeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 94 DEKH---SF---EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP-PREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 94 ~~~~---~~---~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
.... .+ .|...|.+++|+|++++|++++.|+.|++||+..+... ......+...+.+++|.+ ++.++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 161 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCS 161 (337)
T ss_dssp TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEET
T ss_pred CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeC
Confidence 5322 22 58889999999999999999999999999999865532 234456778899999986 5667788899
Q ss_pred CCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEE
Q 018784 167 SGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI 244 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (350)
|+.|++||+++++.+..+.. ...+.+++|+|++++++++ .++.|++||+++...+..+........+.+.+ ++++++
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 240 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGEWLA 240 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECT-TSSEEE
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECC-CCCEEE
Confidence 99999999999998888874 5789999999999877654 68899999999988887777665566666666 578999
Q ss_pred EecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccc
Q 018784 245 AGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTD 324 (350)
Q Consensus 245 sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (350)
+++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++.||.|++|++........ .
T Consensus 241 ~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~----------------~ 303 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ----------------S 303 (337)
T ss_dssp EEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE----------------E
T ss_pred EEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE----------------e
Confidence 9999999999999987754 5678999999999999999999999999999999876543211 1
Q ss_pred cceeeeeeEEEcccch
Q 018784 325 EVTRKIEGFHINKEGK 340 (350)
Q Consensus 325 ~~~~~i~~~~~~~~g~ 340 (350)
.+...|.++.++|+|+
T Consensus 304 ~~~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 304 KESSSVLSCDISVDDK 319 (337)
T ss_dssp ECSSCEEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCC
Confidence 2345567777788775
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.4e-38 Score=288.06 Aligned_cols=286 Identities=16% Similarity=0.231 Sum_probs=237.3
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccC-ccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
.+|.+.+....+++ ++..+++++.|++|++|+..+++....+.. |...|.+++|++++.++++|+.||.|++||+.
T Consensus 88 ~~~~~~~~~~~~~~---s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 88 PGIIDDYYLNLLDW---SNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TTCCCCTTCBCEEE---CTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCcCCceEEEEee---cCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 37776655433332 234578889999999999999999887776 89999999999999999999999999999999
Q ss_pred CCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 92 TGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 92 ~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
+++....+ .|...|.+++| ++.+|++|+.|+.|++||+............|.+.|.+++|++ ++.++++|+.|++|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v 241 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVV 241 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeE
Confidence 98877776 58899999999 4679999999999999999865555556677899999999986 66788899999999
Q ss_pred EEEECCCCceeEeec-CCCCeEEEEEecCC-cEEEEEc---CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEE
Q 018784 171 RLWDARSGKIVQTLE-TKSPVTSAEVSRDG-RYITTAD---GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA 245 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~---~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (350)
++||+++++.+..+. +...+.+++|+|++ .+++++. ++.|++||+++...+..+........+.+.+ +++++++
T Consensus 242 ~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~ 320 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP-HSKEIMS 320 (401)
T ss_dssp EEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEEE
T ss_pred EEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC-CCCeEEE
Confidence 999999998888776 45789999999976 5666553 8999999999998888887666666667766 4677777
Q ss_pred --ecCCCeEEEEEcccCeeEE--eecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcc
Q 018784 246 --GGEDMWVHVFDFHTGEQIG--CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 246 --g~~d~~i~v~d~~~~~~~~--~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++++|++++.||.|++|++...+..
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 6689999999999876544 46799999999999999999999999999999999766544
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-37 Score=291.46 Aligned_cols=283 Identities=19% Similarity=0.309 Sum_probs=236.0
Q ss_pred eEeeccCCce-eEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEe
Q 018784 10 LVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (350)
Q Consensus 10 ~~~~gH~~~v-~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vW 88 (350)
..++||..+| .++.| ++.+|++|+.|++|++||..+++.+..+.+|.+.|.+++|++++ ++++|+.||+|++|
T Consensus 115 ~~l~~h~~~v~~~~~~-----~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF-----EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEECCSSSCEEEEEE-----ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred EEEcCCCCCcEEEEEE-----CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3568999986 55555 45699999999999999999999999999999999999999888 88999999999999
Q ss_pred eCCCCCeeeeee-ccccEeEEEEc--CCCCeEEEeeCCCeEEEEECCCCCCCC----------------------eeecC
Q 018784 89 DALTGDEKHSFE-HKHIVRACAFS--EDTHLLLTGGFEKILRIFDLNRPDAPP----------------------REVGN 143 (350)
Q Consensus 89 d~~~~~~~~~~~-h~~~V~~~~~~--~~~~~l~sg~~d~~v~vwd~~~~~~~~----------------------~~~~~ 143 (350)
|+.+++....+. |...|.+++|+ +++.+|++|+.|++|++||+.+..... .....
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999998877775 89999999998 578999999999999999998654321 23345
Q ss_pred CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCccee
Q 018784 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLV 221 (350)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~ 221 (350)
|...+.++. +++.++++++.|++|++||+++++++..+.. ...+.+++|+|++++++++ .|+.|++||+++..++
T Consensus 269 ~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 269 HMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp CSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 666777764 3566888999999999999999999888874 5789999999999877655 6899999999999888
Q ss_pred eeeecCCCCce-eEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 222 KGYNMPCNTES-ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
..+..+..... +.+. +.++++|+.|+.|++||+.++...... .|...+..++|+|++.++++|+ |+.|++||+.
T Consensus 346 ~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 87765544332 3332 689999999999999999988765544 3666788899999999999999 9999999998
Q ss_pred CCCccc
Q 018784 301 PPNHEE 306 (350)
Q Consensus 301 ~~~~~~ 306 (350)
..+...
T Consensus 421 ~g~~~~ 426 (464)
T 3v7d_B 421 SGKLVH 426 (464)
T ss_dssp TCCEEE
T ss_pred CCcEEe
Confidence 776654
No 53
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=284.82 Aligned_cols=245 Identities=18% Similarity=0.171 Sum_probs=200.6
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeee----ccCccCCeEEEEECCCCcEEEEeeCCCeEEEe
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT----FEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~----l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vW 88 (350)
..|..+|.+++|+| ++ .|++|+.|++|+|||+.+++.+.. +.+|.+.|++++|++++.+|+||+.|++|++|
T Consensus 79 ~~~~~~v~~~~~s~---d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 79 VQTEAGVADLTWVG---ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEESSCEEEEEEET---TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eccCCCEEEEEEeC---CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 45778999999996 64 678999999999999998876543 45899999999999999999999999999999
Q ss_pred eCCCCCeeeee-eccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeee-cCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 89 DALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 89 d~~~~~~~~~~-~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
|+.+++.+..+ .|...|.+++|+|++. +|++++.|++|++||+.+++...... ..+...+.+++|.+.+..++++|+
T Consensus 155 d~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 99999888777 4999999999999884 78999999999999998765433322 234556889999988889999999
Q ss_pred CCCeEEEEECCCCceeEeecC-CCCeEEEEEecCC-cEEE-EEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcE
Q 018784 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYIT-TADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNI 242 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~-~~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.|++|++||+++++++..+.. ...|++++|+|++ ++|+ ++.|+.|++||+++.++++..........+.+.|....+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeE
Confidence 999999999999999888875 5689999999997 4555 557899999999988766533223334566777766678
Q ss_pred EEEecCCCeEEEEEcccCe
Q 018784 243 FIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 243 l~sg~~d~~i~v~d~~~~~ 261 (350)
|++|+.|++|++|++.+..
T Consensus 315 las~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEETTSCEEEEECCC--
T ss_pred EEEEcCCCeEEEEECCCCC
Confidence 8999999999999987643
No 54
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-37 Score=279.72 Aligned_cols=273 Identities=18% Similarity=0.317 Sum_probs=223.3
Q ss_pred ceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEE
Q 018784 52 DWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFD 130 (350)
Q Consensus 52 ~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd 130 (350)
+...+|.||.+.|++++|+|++.+++|||.||+|++||..+++....+ .|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 566789999999999999999999999999999999999888876665 4777899999999999999999999999999
Q ss_pred CCCCCC-----CCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEec--CCcEE
Q 018784 131 LNRPDA-----PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSR--DGRYI 202 (350)
Q Consensus 131 ~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l 202 (350)
+..... .......|.+.+.++.|.+. +..+++++.|++|++||+++++++..+.. ...+.++.++| ++.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 864321 22344568889999999864 55677889999999999999999888875 46788999987 45565
Q ss_pred E-EEcCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCC--CcCEEEEEE
Q 018784 203 T-TADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH--HGPVHCVRF 278 (350)
Q Consensus 203 ~-~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h--~~~v~~l~~ 278 (350)
+ ++.|+.|++||+++..++..+..+... ..+.+.| ++++|++|+.|++|++||++.++.+..+..+ ...+.+++|
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 5 557899999999999888777655443 3455655 5789999999999999999998877666543 457899999
Q ss_pred cCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccchh
Q 018784 279 SPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 279 sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~ 341 (350)
+|++++|++|+.|+.|++||+....... ....+...|.++.++|||+.
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~---------------~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVS---------------ILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEE---------------EECCCSSCEEEEEECTTSSC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEE---------------EEECCCCcEEEEEECCCCCE
Confidence 9999999999999999999986543322 22345567888889998863
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-38 Score=286.71 Aligned_cols=267 Identities=12% Similarity=0.166 Sum_probs=196.8
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeC------CCeEEEeeCCCCCee-----ee
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSA------DFTAKLWDALTGDEK-----HS 98 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~------Dg~v~vWd~~~~~~~-----~~ 98 (350)
++.+ +.++.+.....|++... ...+|+..|++++|+|||.+|||||. |++|++|+..++... ..
T Consensus 16 ~~~~-~~~~g~~~~~~w~~p~~----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~ 90 (357)
T 4g56_B 16 ENLY-FQSNGSSKGSAWGRPVT----APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAG 90 (357)
T ss_dssp -----------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEE
T ss_pred cceE-EecCCCccccccCCCCC----CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEeccc
Confidence 4434 44555677889986543 34579999999999999999999998 788999998766533 23
Q ss_pred eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC---eeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEEC
Q 018784 99 FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP---REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (350)
Q Consensus 99 ~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~ 175 (350)
..|...|.+++|+|++. +++++.|++|++||+.+++... .....|...|.+++|++ ++.++++|+.|++|++||+
T Consensus 91 ~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEET
T ss_pred CCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEEC
Confidence 46888999999999986 5567889999999997665432 22346888999999986 5667889999999999999
Q ss_pred CCCceeEeecC-CCCeEEEEEecCCc--EEEEEcCCcEEEEECCCcceeeeeecCC---CCceeEecCCCCcEEEEecCC
Q 018784 176 RSGKIVQTLET-KSPVTSAEVSRDGR--YITTADGSSVKFWDANHFGLVKGYNMPC---NTESASLEPKLGNIFIAGGED 249 (350)
Q Consensus 176 ~~~~~~~~~~~-~~~v~~~~~~~~~~--~l~~~~~~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~sg~~d 249 (350)
++++++..+.. ...+++++|++++. +++++.|+.|++||+++.+....+.... ....+.+.|..+.+|++|+.|
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 99999988875 56899999999864 4566779999999999887766554332 234567777778899999999
Q ss_pred CeEEEEEcccCeeEEeecCCCcCEEEEEEcCCC-CEEEEecCCCcEEEecCCCCC
Q 018784 250 MWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGG-ESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 250 ~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~-~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+.|++||+++++.+..+.+|...|++++|+|++ ++||+|+.|++|+|||+...+
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 999999999999999999999999999999987 679999999999999987554
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.9e-37 Score=285.87 Aligned_cols=279 Identities=11% Similarity=0.115 Sum_probs=226.5
Q ss_pred eeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee
Q 018784 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (350)
Q Consensus 19 v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~ 98 (350)
+...+|+ +++++||+|+.|++|+|||..+++....+.+|.+.|.+++|+|++.++++++.|++|++||+.+++....
T Consensus 100 ~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 100 TAVDTAK---LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp EEEEEEC---SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE
T ss_pred eEEEEEe---cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE
Confidence 3334455 5999999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred e-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec--CCCCcEEEEEEeC--------------------
Q 018784 99 F-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG--NSSGSIRTVAWLH-------------------- 155 (350)
Q Consensus 99 ~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~-------------------- 155 (350)
+ .|...|.+++|+|++.+|++++.|++|++||+.++........ .+...+.++++.+
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 6 4899999999999999999999999999999986543322221 3456677776642
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEeecC--CCCeEEEEEecCCc-EEEE-EcCCcEEEEECCCcce-eeeeec-CCC
Q 018784 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGR-YITT-ADGSSVKFWDANHFGL-VKGYNM-PCN 229 (350)
Q Consensus 156 ~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~-~l~~-~~~~~i~vwd~~~~~~-~~~~~~-~~~ 229 (350)
+++.++++++.||.|++||+++++.+..+.. ...+.+++|+|++. ++++ +.++.|++||+++... +..+.. +..
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~ 336 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT 336 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC
Confidence 4667889999999999999999988777653 46899999999997 6554 5689999999998643 455544 233
Q ss_pred CceeEecCCCCcEEEEecCCCeEEEEEcccCe---------eEEeecCCCcCEEEEEEcCCCC---EEEEecCCCcEEEe
Q 018784 230 TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE---------QIGCNKGHHGPVHCVRFSPGGE---SYASGSEDGTIRIW 297 (350)
Q Consensus 230 ~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~---------~~~~~~~h~~~v~~l~~sp~~~---~lasgs~Dg~v~vw 297 (350)
.....+.+ ++++|++++.|+.|++||+.... ....+.+|...|.+++|+|+++ .+++.+.+|.+.+|
T Consensus 337 ~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 337 PINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp CEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred CceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 33333444 57899999999999999987632 2234567889999999999999 67777788999999
Q ss_pred cCCC
Q 018784 298 QTNP 301 (350)
Q Consensus 298 ~~~~ 301 (350)
++..
T Consensus 416 ~~~~ 419 (420)
T 3vl1_A 416 NLSN 419 (420)
T ss_dssp ESCC
T ss_pred eccC
Confidence 9854
No 57
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-37 Score=278.14 Aligned_cols=243 Identities=25% Similarity=0.329 Sum_probs=209.2
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
++||..+|.+++|+| +|.+|++|+.|++|+|||+.+++.+..+.+|...|.+++|++++.+++||+.|++|++||+.
T Consensus 61 ~~~h~~~v~~~~~s~---dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 61 FKGHSHIVQDCTLTA---DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp EECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EeCCcccEEEEEECC---CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 589999999999986 99999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCeeeeeeccccEeEEEEcCC------CCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 92 TGDEKHSFEHKHIVRACAFSED------THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 92 ~~~~~~~~~h~~~V~~~~~~~~------~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
.........|...|.++.|+|. +..|++++.|++|++||+.+... ......|...|.+++|+| ++.++++++
T Consensus 138 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~sp-~g~~l~s~~ 215 (319)
T 3frx_A 138 GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI-EADFIGHNSNINTLTASP-DGTLIASAG 215 (319)
T ss_dssp SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE-EEEECCCCSCEEEEEECT-TSSEEEEEE
T ss_pred CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh-heeecCCCCcEEEEEEcC-CCCEEEEEe
Confidence 5444444579999999999985 44899999999999999976443 233456888999999985 567888999
Q ss_pred CCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecC---------CCCceeEec
Q 018784 166 DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP---------CNTESASLE 236 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~---------~~~~~~~~~ 236 (350)
.|++|++||+++++++..+..+.++.+++|+|++.+++++.+..+++|++.....+..+... .....+.+.
T Consensus 216 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 216 KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEEC
Confidence 99999999999999999999889999999999999999988888999999876665544321 112345555
Q ss_pred CCCCcEEEEecCCCeEEEEEcccC
Q 018784 237 PKLGNIFIAGGEDMWVHVFDFHTG 260 (350)
Q Consensus 237 ~~~~~~l~sg~~d~~i~v~d~~~~ 260 (350)
| ++++|++|+.|+.|++||+.++
T Consensus 296 p-dg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 296 A-DGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp T-TSSEEEEEETTSCEEEEEEEEC
T ss_pred C-CCCEEEEeecCceEEEEEEeec
Confidence 5 6899999999999999998764
No 58
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.8e-37 Score=288.08 Aligned_cols=276 Identities=19% Similarity=0.303 Sum_probs=228.6
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
.+|..+|.++.| ++.+|++|+.|++|++||..+++....+.+|.+.|.++++ ++.++++|+.||+|++||+.+
T Consensus 130 ~~~~~~v~~~~~-----d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY-----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC-----CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred cCCCCcEEEEEE-----CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 367788988876 6789999999999999999999999999999999999988 788999999999999999999
Q ss_pred CCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC--eeecCCCCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 93 GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP--REVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 93 ~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
++....+ .|...|.+++|++ .++++|+.|+.|++||+.++.... .....|...+.++++ ++..+++|+.|++
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~ 277 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRT 277 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCe
Confidence 9887776 5888999999974 589999999999999998765442 345678889999988 4568889999999
Q ss_pred EEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecC
Q 018784 170 VRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGE 248 (350)
Q Consensus 170 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 248 (350)
|++||+++++.+..+.. ...+.++.+++ ..+++++.|+.|++||+++..++..+..+........ . ++.++++|+.
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~-~-~~~~l~sg~~ 354 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-F-DNKRIVSGAY 354 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE-C-CSSEEEEEET
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEE-e-cCCEEEEEeC
Confidence 99999999999888875 46788888843 3445556789999999999888877765443332222 2 5789999999
Q ss_pred CCeEEEEEcccCe---------eEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcc
Q 018784 249 DMWVHVFDFHTGE---------QIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 249 d~~i~v~d~~~~~---------~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
|+.|++||+.++. .+..+.+|.+.|.+++| ++.+|++|+.||.|++||+......
T Consensus 355 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 355 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 9999999998776 78888999999999999 7789999999999999998765443
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.3e-37 Score=285.63 Aligned_cols=306 Identities=25% Similarity=0.406 Sum_probs=245.4
Q ss_pred ccceeEeeccCCce-eEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCe
Q 018784 6 VAVPLVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (350)
Q Consensus 6 ~~~~~~~~gH~~~v-~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~ 84 (350)
+..+.++.||.+.| .++.| +|.+|++|+.|++|++||..+++++..+.+|.+.|++++++ +.++++|+.||+
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~-----~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQF-----CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEE-----ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred cceeEEecccCCCcEEEEEE-----cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 34456679999986 44433 57899999999999999999999999999999999999997 679999999999
Q ss_pred EEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 85 AKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 85 v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
|++||+.+++....+ .|...|.+++|+ +..+++|+.|++|++||+.++.. ......|...+.++.+ ++..+++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~---~~~~l~~ 254 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY---DGRRVVS 254 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE-EEEEECCSSCEEEEEE---CSSCEEE
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE-EEEEcCCcccEEEEEE---CCCEEEE
Confidence 999999998877766 488899999995 56799999999999999986543 3344568889999988 4567888
Q ss_pred EeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEE-EEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCc
Q 018784 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
++.|++|++||+++++++..+.. ...+.++.+ ++.+++ ++.++.|++||+++...+..+..+..... .+.+ .++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~-~~~ 330 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMEL-KDN 330 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE-EEEE-ETT
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE-EEEE-eCC
Confidence 99999999999999999888874 467888888 555554 55689999999999888877665433322 2222 468
Q ss_pred EEEEecCCCeEEEEEcccCeeEEeecC---CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccc
Q 018784 242 IFIAGGEDMWVHVFDFHTGEQIGCNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGK 318 (350)
Q Consensus 242 ~l~sg~~d~~i~v~d~~~~~~~~~~~~---h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 318 (350)
++++|+.|+.|++||+.+++.+..+.+ |..+|.+++|+ +.+|++|+.||.|++||+...+......
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------- 399 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV--------- 399 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---------
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee---------
Confidence 999999999999999999999888876 88999999996 5799999999999999987655432210
Q ss_pred cccccccceeeeeeEEEcccch
Q 018784 319 LKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
......+...|.++.++|+|.
T Consensus 400 -~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 400 -TLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp -ECTTGGGTCEEEEEEECSSEE
T ss_pred -ccccCCCCceEEEEEecCCEE
Confidence 011134455667777777664
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-37 Score=323.89 Aligned_cols=285 Identities=28% Similarity=0.503 Sum_probs=250.4
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
+++.+|.+.|++++|+| +|++||+|+.|++|+|||..+++.+.++.+|.+.|.+++|+|++.++++++.||+|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ---DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecccccEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 34689999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeee-eccccEeEEEEcC--CCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 90 ALTGDEKHSF-EHKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 90 ~~~~~~~~~~-~h~~~V~~~~~~~--~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
+.+++....+ .|...|.+++|+| ++.++++|+.|+.|++||+.++.. ......|.+.|.+++|++ ++.++++++.
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp-~~~~l~s~s~ 763 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSP-DDELLASCSA 763 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECS-STTEEEEEES
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEec-CCCEEEEEEC
Confidence 9999887776 5889999999999 556899999999999999987553 334457888999999986 5668889999
Q ss_pred CCeEEEEECCCCceeEeecCC--------------CCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecC--CCC
Q 018784 167 SGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP--CNT 230 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~--~~~ 230 (350)
||+|++||+++++....+... ..+.+++|+|++++++++.++.+.+||+.+...+..+... ...
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999999998877665432 2577889999999999888999999999998877666432 233
Q ss_pred ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 231 ~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
..+.+.+ ++.++++++.|+.|++||+.++..+..+.+|...|++++|+|++++|++++.|+.|++|++.
T Consensus 844 ~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 844 QYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp CEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 4455555 68999999999999999999999999999999999999999999999999999999999964
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-37 Score=278.72 Aligned_cols=291 Identities=18% Similarity=0.206 Sum_probs=216.8
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC----ceeeeccCccCCeEEEEECC--CCcEEEEeeCCC
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA--NALFSASGSADF 83 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~----~~~~~l~gH~~~V~~v~~~~--~~~~l~s~s~Dg 83 (350)
.++.||+++|++++|+| ++.+||+|+.|++|+||+..++ +....+.+|...|.+++|++ ++.++++++.||
T Consensus 5 ~~~~gH~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF---YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEEcC---CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 34689999999999987 9999999999999999999876 46778899999999999999 699999999999
Q ss_pred eEEEeeCCCCC---------eeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCCCCeee----------
Q 018784 84 TAKLWDALTGD---------EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPPREV---------- 141 (350)
Q Consensus 84 ~v~vWd~~~~~---------~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~~~~~~---------- 141 (350)
+|++||+.++. ....+ .|...|.+++|+|+ +.+|++++.|+.|++||+.+........
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 99999998763 23333 58899999999999 9999999999999999998765433221
Q ss_pred --cCCCCcEEEEEEeCC--CCcEEEEEeCCCeEEEEECCCCce--eEeec-CCCCeEEEEEecCC----cEEEE-EcCCc
Q 018784 142 --GNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKI--VQTLE-TKSPVTSAEVSRDG----RYITT-ADGSS 209 (350)
Q Consensus 142 --~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~iwd~~~~~~--~~~~~-~~~~v~~~~~~~~~----~~l~~-~~~~~ 209 (350)
..+...+.+++|.+. ++.++++++.|+.+.+|+...++. +..+. +...|.+++|+|++ +++++ +.|+.
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 256778999999875 467888899999998888887764 44554 45789999999997 66654 56899
Q ss_pred EEEEECCCcceeeeeecCCCCceeEecCCCCcE----EEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEE
Q 018784 210 VKFWDANHFGLVKGYNMPCNTESASLEPKLGNI----FIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESY 285 (350)
Q Consensus 210 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~l 285 (350)
|++||++.......................... ...+.....+.+|+....+.+..+.+|...|++++|+|++++|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999999765433222111111111111111112 2233345566777777788888999999999999999999999
Q ss_pred EEecCCCcEEEecCCCCC
Q 018784 286 ASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 286 asgs~Dg~v~vw~~~~~~ 303 (350)
++|+.||.|++|++....
T Consensus 322 ~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEETTSCEEEEEECTTS
T ss_pred EEecCCCcEEEEecCcCc
Confidence 999999999999987544
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=275.70 Aligned_cols=282 Identities=15% Similarity=0.176 Sum_probs=227.1
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC-Ccee-eeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWI-GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~-~~~~-~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
+++|.++|++++|+|-..+|.+|++|+.|++|+||+..+ ++.+ ..+.+|.+.|.+++|++++.++++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 579999999999998332379999999999999999987 5555 78899999999999999999999999999999999
Q ss_pred CCCCCeeeeeeccccEeEEEE--cCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC
Q 018784 90 ALTGDEKHSFEHKHIVRACAF--SEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (350)
Q Consensus 90 ~~~~~~~~~~~h~~~V~~~~~--~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d 167 (350)
+.+++......|...|.+++| +|++.+|++++.|+.|++||+.+....... . ....+.++.+.. ..++.++.+
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~-~~~~~~~~~~~~---~~~~~~~~~ 189 (368)
T 3mmy_A 115 LSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL-Q-LPERCYCADVIY---PMAVVATAE 189 (368)
T ss_dssp TTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE-E-CSSCEEEEEEET---TEEEEEEGG
T ss_pred cCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE-e-cCCCceEEEecC---CeeEEEeCC
Confidence 999988888889999999999 899999999999999999999876544333 2 234566776653 256667788
Q ss_pred CeEEEEECCCCceeEeec---CCCCeEEEEEecCCc-----EEEEEcCCcEEEEECCCc---ceeeeeecCC--------
Q 018784 168 GGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGR-----YITTADGSSVKFWDANHF---GLVKGYNMPC-------- 228 (350)
Q Consensus 168 g~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~-----~l~~~~~~~i~vwd~~~~---~~~~~~~~~~-------- 228 (350)
+.+++||++......... .......+.+.++.. +++++.++.|++||++.. ..+..+..+.
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CC
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccc
Confidence 999999998765433222 234455666655443 566678999999999876 3333443332
Q ss_pred -----CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 229 -----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 229 -----~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
....+.+.+ ++++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++|+.|+..+.|+.
T Consensus 270 ~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 270 PQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred cccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 233455665 5789999999999999999999999999999999999999999999999999987666654
No 63
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.8e-38 Score=284.47 Aligned_cols=276 Identities=12% Similarity=0.099 Sum_probs=206.4
Q ss_pred CCceeEEEecccCCCccEEEEEeCCC-------CeeEeeCCCCce----------eeeccCccCCeEEEEECCCCcEEE-
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDS-------SPMLRNGETGDW----------IGTFEGHKGAVWSCCLDANALFSA- 77 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~-------~v~iw~~~~~~~----------~~~l~gH~~~V~~v~~~~~~~~l~- 77 (350)
.-||++++|+| ||++||+|+.|. +|+||+...... ...|.+|...|.+++++ +..++
T Consensus 14 g~PV~sv~fs~---dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~ 88 (365)
T 4h5i_A 14 GYPAYGAKFLN---NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILV 88 (365)
T ss_dssp SSCEEEEEEEE---TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEE
T ss_pred CCCEEEEEEeC---CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEE
Confidence 34899999997 999999998654 499999765432 13578899999887765 33444
Q ss_pred ----------EeeCCCeEEEeeCCCCCeeeee----------eccccEeEEEEcCCCCeEEE--eeCCCeEEEEECCCCC
Q 018784 78 ----------SGSADFTAKLWDALTGDEKHSF----------EHKHIVRACAFSEDTHLLLT--GGFEKILRIFDLNRPD 135 (350)
Q Consensus 78 ----------s~s~Dg~v~vWd~~~~~~~~~~----------~h~~~V~~~~~~~~~~~l~s--g~~d~~v~vwd~~~~~ 135 (350)
+++.|+++|+|++.+....... .+...+++++|+|||+++++ ++.|++|++||+.+..
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 4467889999998665432211 13456899999999999764 5579999999998655
Q ss_pred CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec---CCCCeEEEEEecCCcEEEEEc-CC---
Q 018784 136 APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITTAD-GS--- 208 (350)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~~--- 208 (350)
.... ..|.+.|.+++|+| ++.++++++++ .+++|+..+++.+.... +...+.+++|+|++++++++. ++
T Consensus 169 ~~~~--~~~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 169 EKFE--IETRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEE--EECSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEEE--eCCCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 4322 24667899999986 56677787754 67777777776554332 345789999999999886653 33
Q ss_pred -cEEEEECCCccee----eeeecCCC-CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe-ecCCCcCEEEEEEcCC
Q 018784 209 -SVKFWDANHFGLV----KGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC-NKGHHGPVHCVRFSPG 281 (350)
Q Consensus 209 -~i~vwd~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~sp~ 281 (350)
.+++||+...... +.+..+.. ..++.+.| ++++|++|+.|+.|+|||+.+++++.. +.+|..+|++|+|+||
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC
Confidence 5888987664421 22222322 33455655 689999999999999999999999887 4799999999999999
Q ss_pred CCEEEEecCCCcEEEecCCC
Q 018784 282 GESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 282 ~~~lasgs~Dg~v~vw~~~~ 301 (350)
+++|||||.|++|+||+++.
T Consensus 324 g~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 324 STYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999999853
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.2e-37 Score=276.21 Aligned_cols=276 Identities=11% Similarity=0.004 Sum_probs=229.4
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc---eeeeccCccCCeEEEEECCCCc-EEEEeeCCCeEEE
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKL 87 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~---~~~~l~gH~~~V~~v~~~~~~~-~l~s~s~Dg~v~v 87 (350)
..+|.++|++++|+| ++.+|++|+.|++|+||+..+++ ....+.+|...|.+++|++++. ++++|+.||.|++
T Consensus 7 ~~~h~~~v~~~~~s~---~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP---SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEG---GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcC---CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 368999999999997 89999999999999999998877 3456668999999999999999 9999999999999
Q ss_pred eeC-CCCCeeeeee--ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC---------CCCCCeeecCCCCcEEEEEEeC
Q 018784 88 WDA-LTGDEKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR---------PDAPPREVGNSSGSIRTVAWLH 155 (350)
Q Consensus 88 Wd~-~~~~~~~~~~--h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~---------~~~~~~~~~~~~~~v~~~~~~~ 155 (350)
||+ .++....... |...|.+++|+| +.+|++++.|+.|++||+.. ...... . .+...+.+++|.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN-T-KVKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-S-SSCCCEEEEEECS
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE-E-eeCCceEEEEecC
Confidence 999 8887755556 999999999999 99999999999999999875 333222 2 2778899999975
Q ss_pred CCCcEEEEEeCCCeEEEEECCC-Ccee---EeecCCCCeEEEEEec-CCcEEEE-EcCCcEEEEECCCc------ceeee
Q 018784 156 SDQTILSSCTDSGGVRLWDARS-GKIV---QTLETKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHF------GLVKG 223 (350)
Q Consensus 156 ~~~~~~~s~~~dg~i~iwd~~~-~~~~---~~~~~~~~v~~~~~~~-~~~~l~~-~~~~~i~vwd~~~~------~~~~~ 223 (350)
.. +++++.|+.|++||+++ +... ....+...+.+++|+| +++++++ +.++.|++||.+.. .....
T Consensus 161 ~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 43 77888999999999998 5432 2334567899999999 8887765 46889999999776 55555
Q ss_pred eecCC----------CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCC-CcCEEEEEEcCCCCEEEEecCCC
Q 018784 224 YNMPC----------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH-HGPVHCVRFSPGGESYASGSEDG 292 (350)
Q Consensus 224 ~~~~~----------~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h-~~~v~~l~~sp~~~~lasgs~Dg 292 (350)
+..+. ....+.+.+ ++++|++|+.|+.|++||+.+++.+..+.+| ..+|.+++ |++++|++|+.||
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 54432 233445555 5789999999999999999999999999998 99999999 9999999999999
Q ss_pred c-EEEecC
Q 018784 293 T-IRIWQT 299 (350)
Q Consensus 293 ~-v~vw~~ 299 (350)
. .+.|..
T Consensus 315 ~~~~~~~~ 322 (342)
T 1yfq_A 315 TFKTNAAI 322 (342)
T ss_dssp HHHHCSSS
T ss_pred cccccccc
Confidence 8 666653
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-36 Score=292.06 Aligned_cols=305 Identities=14% Similarity=0.201 Sum_probs=232.3
Q ss_pred eeccCCceeEEEecccCCCcc-EEEEEeCCCCeeEeeCCCCceeeeccCccC---CeEEEEECCC-CcEEEEeeCCCeEE
Q 018784 12 CHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDAN-ALFSASGSADFTAK 86 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~~~~~~~~~l~gH~~---~V~~v~~~~~-~~~l~s~s~Dg~v~ 86 (350)
+.+|..+|.+++|+| ++. ++++++.|+++++||..+++++..+.+|.. .|.+++|+|+ +.++++++.||.|+
T Consensus 156 ~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 156 VSGHSQRINACHLKQ---SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp CCSCSSCEEEEEECS---SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred eecCCccEEEEEECC---CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 478999999999987 776 899999999999999999999999999999 9999999999 99999999999999
Q ss_pred EeeCCCCCeeeee-----eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeee--------------------
Q 018784 87 LWDALTGDEKHSF-----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-------------------- 141 (350)
Q Consensus 87 vWd~~~~~~~~~~-----~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-------------------- 141 (350)
+||+.+++....+ .|...|.+++|+ ++.+|++++.|+.|++||+.+........
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 311 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence 9999999988887 789999999999 99999999999999999987543211111
Q ss_pred ------------------------cCCCCc---------------------------------EEEEEEeCCCCcEEEEE
Q 018784 142 ------------------------GNSSGS---------------------------------IRTVAWLHSDQTILSSC 164 (350)
Q Consensus 142 ------------------------~~~~~~---------------------------------v~~~~~~~~~~~~~~s~ 164 (350)
..|... |.+++| + ++..++++
T Consensus 312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~-~~~~l~~~ 389 (615)
T 1pgu_A 312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-S-KAQEYSSI 389 (615)
T ss_dssp EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-C-STTCCEEE
T ss_pred EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-C-CCcEEEEE
Confidence 112222 223332 1 12334445
Q ss_pred eCCCeEEEEECC----------------------------------CCceeEeecCCCCeEEEEEecCCcEEEE-Ec-CC
Q 018784 165 TDSGGVRLWDAR----------------------------------SGKIVQTLETKSPVTSAEVSRDGRYITT-AD-GS 208 (350)
Q Consensus 165 ~~dg~i~iwd~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-~~ 208 (350)
+.|++|++||++ +++.+..+....++.+++++ ++++++ +. ++
T Consensus 390 ~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~ 467 (615)
T 1pgu_A 390 SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGN 467 (615)
T ss_dssp ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTS
T ss_pred eCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCC
Confidence 555555555543 23334444445567777777 555544 45 88
Q ss_pred cEEEEECCCccee-eeeecCC-CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC-CCcCEEEEEEcC-----
Q 018784 209 SVKFWDANHFGLV-KGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG-HHGPVHCVRFSP----- 280 (350)
Q Consensus 209 ~i~vwd~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~-h~~~v~~l~~sp----- 280 (350)
.|++||+.+.... ..+..+. ....+.+.+ ++++|++|+.|+.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 546 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA 546 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC---
T ss_pred eEEEEECCCccccccccCCccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccc
Confidence 9999999876554 2222222 233445554 689999999999999999999999999888 999999999999
Q ss_pred -----CCCEEEEecCCCcEEEecCCCC-CcccCCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 281 -----GGESYASGSEDGTIRIWQTNPP-NHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 281 -----~~~~lasgs~Dg~v~vw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
++++|++|+.||.|++|++... ... .....+...|.++.++|||+
T Consensus 547 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---------------~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 547 NEEEIEEDLVATGSLDTNIFIYSVKRPMKII---------------KALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp ---CCSCCEEEEEETTSCEEEEESSCTTCCE---------------EETTSSTTCEEEEEEEETTE
T ss_pred cccccCCCEEEEEcCCCcEEEEECCCCceec---------------hhhhcCccceEEEEEcCCCC
Confidence 9999999999999999998654 222 22334455677778888775
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-36 Score=273.18 Aligned_cols=244 Identities=18% Similarity=0.248 Sum_probs=200.8
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.+.||..+|.+++|+| ++.+|++|+.|++|+|||+.+++++..+.+|...|.+++|+|++.++++++.|++|++||+
T Consensus 71 ~l~~h~~~V~~~~~~~---~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQ---ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EECCCSSCEEEEEECS---STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred hhccCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 3589999999999986 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeeeee---eccccEeEEEEcCCC----------CeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCC
Q 018784 91 LTGDEKHSF---EHKHIVRACAFSEDT----------HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 91 ~~~~~~~~~---~h~~~V~~~~~~~~~----------~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
......... .|...|.+++|+|++ .+|++++.|++|++||.. .........|...|.+++|++ +
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~-~ 224 (343)
T 2xzm_R 148 LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISP-N 224 (343)
T ss_dssp SSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECT-T
T ss_pred cCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECC-C
Confidence 743322222 478889999999987 789999999999999953 222334567888999999986 5
Q ss_pred CcEEEEEeCCCeEEEEECC-CCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceee--eee---------
Q 018784 158 QTILSSCTDSGGVRLWDAR-SGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK--GYN--------- 225 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~--~~~--------- 225 (350)
+.++++|+.|++|++||++ .......+.....+.+++|+|++.+++++.++.|++||+.+..... .+.
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEG 304 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTT
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhh
Confidence 6788899999999999994 4455555656677999999999999999999999999998765433 221
Q ss_pred --cC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCe
Q 018784 226 --MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 226 --~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~ 261 (350)
.+ .....+.+.| ++++|++|+.|+.|++|++.++.
T Consensus 305 ~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 305 QKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp BCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEEEEEEE
T ss_pred hcCCCCceEEEEECC-CCCeEEEecCCceEEEEEEEccC
Confidence 11 1123455655 58899999999999999987653
No 67
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=272.91 Aligned_cols=281 Identities=17% Similarity=0.262 Sum_probs=214.8
Q ss_pred CceeeeccCccC-CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCee--ee--eeccccEeEEEEcCCCCeEEEeeCCCe
Q 018784 51 GDWIGTFEGHKG-AVWSCCLDANALFSASGSADFTAKLWDALTGDEK--HS--FEHKHIVRACAFSEDTHLLLTGGFEKI 125 (350)
Q Consensus 51 ~~~~~~l~gH~~-~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~--~~--~~h~~~V~~~~~~~~~~~l~sg~~d~~ 125 (350)
.+++.++.+|.+ .|++++|+|++.+||||+.|++|+|||+.++... .. ..|...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 456778999998 8999999999999999999999999999876532 22 258899999999999999999999999
Q ss_pred EEEEECCCCCC-CCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCc---eeEeec-CCCCeEEEEEecCCc
Q 018784 126 LRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK---IVQTLE-TKSPVTSAEVSRDGR 200 (350)
Q Consensus 126 v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~ 200 (350)
+++||+..... .......|...|.+++|++ ++.++++|+.|++|++||++++. ++..+. +...+..++|+|+++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999875432 2234567889999999986 56788899999999999998764 344444 356799999999998
Q ss_pred EEEEE-cCCcEEEEECCCccee--eeeecCCC-CceeEecCCCCcEEEEecCCCeEEEEEcccC---------------e
Q 018784 201 YITTA-DGSSVKFWDANHFGLV--KGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTG---------------E 261 (350)
Q Consensus 201 ~l~~~-~~~~i~vwd~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~---------------~ 261 (350)
+|+++ .|+.|++||.+..... ..+..+.. ...+.+.+ ++++|++|+.|++|++||.... .
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 77654 6899999998876433 33333333 34455665 5899999999999999997432 2
Q ss_pred eEEeecC-CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCcccccccc-ccccceeeeeeEEEcccc
Q 018784 262 QIGCNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKA-STDEVTRKIEGFHINKEG 339 (350)
Q Consensus 262 ~~~~~~~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~g 339 (350)
.+..+.+ |...|++++|+|++..|++++.|+.|++|+.......... ...+.. ....+...|.++.++|++
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-------~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP-------TFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC-------CEEEEEEETTSSSSCEEEEEECSSS
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee-------eEEEEeeecccccCcEeEeEEeCCC
Confidence 3344554 8899999999999999999999999999998654321110 001111 123456678888888876
Q ss_pred h
Q 018784 340 K 340 (350)
Q Consensus 340 ~ 340 (350)
.
T Consensus 316 ~ 316 (345)
T 3fm0_A 316 P 316 (345)
T ss_dssp T
T ss_pred c
Confidence 4
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.9e-37 Score=319.26 Aligned_cols=287 Identities=19% Similarity=0.293 Sum_probs=248.7
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
.+|..+|.+++|+| ++.++++++.|+++++|+..++..+..+.+|.+.|.+++|+|++.++++++.||+|++|++.+
T Consensus 837 ~~~~~~v~~~~~sp---~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 837 TGHHSTIQYCDFSP---YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CSSSSCCCEEEECS---STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCCCCceEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 38999999999987 899999999999999999999999999999999999999999999999999999999999643
Q ss_pred CCe--------------------------------------eeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCC
Q 018784 93 GDE--------------------------------------KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP 134 (350)
Q Consensus 93 ~~~--------------------------------------~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 134 (350)
... .....+...+.+++|+|+++++++|+.|+.|++||+.++
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~ 993 (1249)
T 3sfz_A 914 VCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN 993 (1249)
T ss_dssp HHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT
T ss_pred cceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC
Confidence 100 001123456899999999999999999999999999865
Q ss_pred CCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEE
Q 018784 135 DAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWD 214 (350)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd 214 (350)
.. ......|...|.+++|++ ++..+++++.|++|++||+.+++......+...+.++.++|++.+++++.++.|++||
T Consensus 994 ~~-~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd 1071 (1249)
T 3sfz_A 994 RV-FSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWN 1071 (1249)
T ss_dssp SC-EEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEE
T ss_pred ce-eeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEE
Confidence 43 344457888999999986 4567778899999999999999888777777899999999999999999999999999
Q ss_pred CCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCc
Q 018784 215 ANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGT 293 (350)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~ 293 (350)
+.++..+..+..+... ..+.+.+ +++++++++.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+.||.
T Consensus 1072 ~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A 1072 VITGRIERDFTCHQGTVLSCAISS-DATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp TTTTCCCEEEECCSSCCCCEEECS-SSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred CCCCceeEEEcccCCcEEEEEECC-CCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE
Confidence 9998888777655443 3445554 6889999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCcc
Q 018784 294 IRIWQTNPPNHE 305 (350)
Q Consensus 294 v~vw~~~~~~~~ 305 (350)
|++||+......
T Consensus 1151 i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1151 IRIWNVSDGQLL 1162 (1249)
T ss_dssp CCEEESSSSCCC
T ss_pred EEEEECCCCceE
Confidence 999999766544
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-35 Score=262.50 Aligned_cols=272 Identities=24% Similarity=0.352 Sum_probs=219.8
Q ss_pred CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEE
Q 018784 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIF 129 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vw 129 (350)
.....++.+|.+.|.+++|+|++.++++++.||.|++|+..+++....+ .|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 3456688999999999999999999999999999999999888876666 588899999999999999999999999999
Q ss_pred ECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cC
Q 018784 130 DLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DG 207 (350)
Q Consensus 130 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~ 207 (350)
|+.+... ......|...+.+++|.+ ++.++++|+.|++|++||+++++.+..+.. ..++.+++|+|++++++++ .+
T Consensus 93 d~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 93 DVSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp ETTTCCE-EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCcE-EEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9986543 334566888999999986 566788999999999999999998888875 4689999999999877654 68
Q ss_pred CcEEEEECCCcceeeeeecCCC-C-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEE---EEEEcCCC
Q 018784 208 SSVKFWDANHFGLVKGYNMPCN-T-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVH---CVRFSPGG 282 (350)
Q Consensus 208 ~~i~vwd~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~---~l~~sp~~ 282 (350)
+.|++||+++...+..+..... . ..+.+.+ ++++|++++.|+.|++||+.+++.+..+.+|...+. .....+++
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999998877665543322 2 2344554 588999999999999999999999999988876533 23334678
Q ss_pred CEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 283 ESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 283 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
.+|++|+.||.|++||+...+..... ..+...|....++|++.
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~---------------~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKL---------------QGHTDVVISTACHPTEN 292 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEE---------------CCCSSCEEEEEECSSSS
T ss_pred cEEEEECCCCEEEEEECCCchhhhhh---------------hccCCcEEEEeecCcCC
Confidence 89999999999999998765443322 33444556666666654
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-35 Score=276.38 Aligned_cols=274 Identities=24% Similarity=0.372 Sum_probs=231.1
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.+.+|.++|+++.|+ +.+|++|+.|++|++||..+++.+..+.+|...|.++.++ +..+++|+.||+|++||+
T Consensus 154 ~~~~h~~~v~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR-----DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 226 (445)
T ss_dssp ECCCCSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEES
T ss_pred EEcCCCCCEEEEEec-----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEEC
Confidence 357999999999996 3499999999999999999999999999999999999985 678999999999999999
Q ss_pred CCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 91 LTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 91 ~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
.+++....+ .|...|.+++| ++.++++|+.|+.|++||+.++.. ......|...+.++.| ++..+++++.|++
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~ 300 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQF---DGIHVVSGSLDTS 300 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE-EEEECCCSSCEEEEEE---CSSEEEEEETTSC
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE-eEEecCCCCceEEEEE---CCCEEEEEeCCCe
Confidence 998877766 58889999999 788999999999999999876543 3344567888999988 5667889999999
Q ss_pred EEEEECCCCceeEeecCC-CCeEEEEEecCCcEE-EEEcCCcEEEEECCCcceeeeeecCC---C-CceeEecCCCCcEE
Q 018784 170 VRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMPC---N-TESASLEPKLGNIF 243 (350)
Q Consensus 170 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~~~i~vwd~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l 243 (350)
|++||+++++++..+..+ ..+..+.++ +.++ +++.++.|++||+++...+..+..+. . ...+.+ +++++
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l 375 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFV 375 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE---CSSEE
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE---CCCEE
Confidence 999999999998888754 456666654 4454 55678999999999988887776522 1 223333 36899
Q ss_pred EEecCCCeEEEEEcccCeeEEee-----cCCCcCEEEEEEcCCCCEEEEecCCCc----EEEecCCCC
Q 018784 244 IAGGEDMWVHVFDFHTGEQIGCN-----KGHHGPVHCVRFSPGGESYASGSEDGT----IRIWQTNPP 302 (350)
Q Consensus 244 ~sg~~d~~i~v~d~~~~~~~~~~-----~~h~~~v~~l~~sp~~~~lasgs~Dg~----v~vw~~~~~ 302 (350)
++|+.|+.|++||+.+++.+..+ .+|.+.|++++|+|++.++++|+.||+ |.+||.+..
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999999999999988777 478889999999999999999999998 999998654
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=273.77 Aligned_cols=247 Identities=17% Similarity=0.257 Sum_probs=200.3
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCC--CCceeeeccCccCCeEEEEECCC--CcEEEEeeCCCeEE
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTAK 86 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~--~~~~~~~l~gH~~~V~~v~~~~~--~~~l~s~s~Dg~v~ 86 (350)
+++||.++|.+++|+| ++.+||+|+.|++|+||+.. +++.+..+.+|...|++++|+++ +.++++++.||.|+
T Consensus 6 ~~~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 6 IANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp CEEECCCCEEEEEECS---SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred EecCCcccEEEEEEcC---CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 4689999999999987 99999999999999999987 67788899999999999999877 89999999999999
Q ss_pred EeeCCCCC--eeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCCCC-eeecCCCCcEEEEEEeCC----
Q 018784 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHS---- 156 (350)
Q Consensus 87 vWd~~~~~--~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~---- 156 (350)
+||+.+++ ....+ .|...|.+++|+|+ +.+|++++.|+.|++||+....... .....|...+.+++|.+.
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99998876 33333 48889999999999 9999999999999999998764333 345578889999999875
Q ss_pred --------CCcEEEEEeCCCeEEEEECCCCce----eEeec-CCCCeEEEEEecC---CcEEEEEcCCcEEEEECCCcce
Q 018784 157 --------DQTILSSCTDSGGVRLWDARSGKI----VQTLE-TKSPVTSAEVSRD---GRYITTADGSSVKFWDANHFGL 220 (350)
Q Consensus 157 --------~~~~~~s~~~dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~~~~---~~~l~~~~~~~i~vwd~~~~~~ 220 (350)
++.++++++.|++|++||+++++. ...+. +..++.+++|+|+ +.+
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~------------------- 223 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY------------------- 223 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE-------------------
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe-------------------
Confidence 678889999999999999987653 23333 3467888888876 444
Q ss_pred eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe-----eEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEE
Q 018784 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE-----QIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIR 295 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~ 295 (350)
|++++.|+.|++||+.++. .+.....|...|++++|+|++++|++++.||.|+
T Consensus 224 ----------------------l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 224 ----------------------LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp ----------------------EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred ----------------------EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 4444444555555544432 1122345888999999999999999999999999
Q ss_pred EecCCC
Q 018784 296 IWQTNP 301 (350)
Q Consensus 296 vw~~~~ 301 (350)
+|++..
T Consensus 282 iw~~~~ 287 (379)
T 3jrp_A 282 LWKENL 287 (379)
T ss_dssp EEEEEE
T ss_pred EEeCCC
Confidence 999863
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.6e-36 Score=289.32 Aligned_cols=284 Identities=18% Similarity=0.165 Sum_probs=242.0
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC----ceeeeccCccCC-eEEEEECC--CCcEEEEeeCCCe
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGA-VWSCCLDA--NALFSASGSADFT 84 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~----~~~~~l~gH~~~-V~~v~~~~--~~~~l~s~s~Dg~ 84 (350)
...|.+.|.+++|+| +|++||+++ |+.++||+..++ +....+.+|.+. |.+++|+| ++.++++++.||+
T Consensus 14 ~~~~~~~v~~~~~sp---dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~ 89 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDP---TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK 89 (615)
T ss_dssp CCCCTTCCCCCEEET---TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred CCCccCceeEEEECC---CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCE
Confidence 368999999999997 999999998 789999999999 899999999999 99999999 9999999999999
Q ss_pred EEEeeCCCC--------Ceeeee-eccccEeEEEEcCCCCeEEEeeCC----CeEEEEECCCCCCCCeeecCCCCcEEEE
Q 018784 85 AKLWDALTG--------DEKHSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTV 151 (350)
Q Consensus 85 v~vWd~~~~--------~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d----~~v~vwd~~~~~~~~~~~~~~~~~v~~~ 151 (350)
|++||+.++ .....+ .|...|.+++|+|++++|++++.+ +.|++||.. ........|...+.++
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NSLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CEEEECCSCSSCEEEE
T ss_pred EEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---CcceeeecCCccEEEE
Confidence 999999754 334444 388899999999999999999988 689999843 2334456788899999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-C---CeEEEEEecC-CcEEEE-EcCCcEEEEECCCcceeeee-
Q 018784 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-S---PVTSAEVSRD-GRYITT-ADGSSVKFWDANHFGLVKGY- 224 (350)
Q Consensus 152 ~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~---~v~~~~~~~~-~~~l~~-~~~~~i~vwd~~~~~~~~~~- 224 (350)
+|++.+..++++++.|++|++||+++++.+..+..+ . .+.+++|+|+ ++++++ +.++.|++||+++.+.+..+
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 246 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 246 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence 999877768999999999999999999998888754 4 6999999999 887765 46899999999998888776
Q ss_pred e---cC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCC----CcCEEEEEEcCCCCEEEEecCCCcEEE
Q 018784 225 N---MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH----HGPVHCVRFSPGGESYASGSEDGTIRI 296 (350)
Q Consensus 225 ~---~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h----~~~v~~l~~sp~~~~lasgs~Dg~v~v 296 (350)
. .+ .....+.+. ++++|++++.|+.|++||+.+++.+..+..+ ...+.++.|+ ++.++++|+.|+.|++
T Consensus 247 ~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~ 323 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNF 323 (615)
T ss_dssp BTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEE
T ss_pred ccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEE
Confidence 2 22 233445555 6899999999999999999999998888766 4678899996 8899999999999999
Q ss_pred ecCCCCCcc
Q 018784 297 WQTNPPNHE 305 (350)
Q Consensus 297 w~~~~~~~~ 305 (350)
||+......
T Consensus 324 ~d~~~~~~~ 332 (615)
T 1pgu_A 324 YELGHDEVL 332 (615)
T ss_dssp EETTEEEEE
T ss_pred EECCCCcEE
Confidence 998764443
No 73
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-37 Score=283.76 Aligned_cols=287 Identities=13% Similarity=0.215 Sum_probs=222.9
Q ss_pred ccCCceeEEEecc-------cCCCccEEEEEeCCCCeeEeeCCCCceeeec-cCccCCeEEEEECC-CCcEEEEeeCCCe
Q 018784 14 GHSRPVVDLFYSP-------ITPDGFFLVSASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDA-NALFSASGSADFT 84 (350)
Q Consensus 14 gH~~~v~~~~~~~-------~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l-~gH~~~V~~v~~~~-~~~~l~s~s~Dg~ 84 (350)
.|...+..+.+.| ++|++..+++++ .|+ .+++++.++ ++|.+.|++++|++ ++.+|+||+.||+
T Consensus 15 ~~~~~l~~~~~~p~~~~~~~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~ 87 (437)
T 3gre_A 15 SIEKFLSTFKILPPLRDYKEFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGV 87 (437)
T ss_dssp CCGGGTTCC-CCCCGGGCGGGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSE
T ss_pred HHHHHhccCCCCCChhchhhcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCce
Confidence 4455555554433 567777777665 487 567888888 99999999999999 9999999999999
Q ss_pred EEEeeCCC---CC---eeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECC---CCCCCCeee---------cC--C
Q 018784 85 AKLWDALT---GD---EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN---RPDAPPREV---------GN--S 144 (350)
Q Consensus 85 v~vWd~~~---~~---~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~---~~~~~~~~~---------~~--~ 144 (350)
|++||+.+ +. ....+.|...|.+++|+|++.+|++|+.|++|++||+. .+....... .. +
T Consensus 88 v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 167 (437)
T 3gre_A 88 IKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGK 167 (437)
T ss_dssp EEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSS
T ss_pred EEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccc
Confidence 99999866 33 34556799999999999999999999999999999984 222111000 01 4
Q ss_pred CCcEEEEEEe-CCCCcEEEEEeCCCeEEEEECCCCceeEeecC---CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcc
Q 018784 145 SGSIRTVAWL-HSDQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG 219 (350)
Q Consensus 145 ~~~v~~~~~~-~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~ 219 (350)
...+.++.+. .+++.++++++.|++|++||+++++++..+.. ...+++++|+|++++++++ .++.|++||+++..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 4556666543 35678899999999999999999999888875 5789999999999887754 68899999999988
Q ss_pred eeeeeecCCC--CceeEecC---CCCcEEEEecCCCeEEEEEcccCeeEEeecC--------------------------
Q 018784 220 LVKGYNMPCN--TESASLEP---KLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG-------------------------- 268 (350)
Q Consensus 220 ~~~~~~~~~~--~~~~~~~~---~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~-------------------------- 268 (350)
++..+..... ...+.+.+ +++.+|++|+.|+.|++||+.+++.+..+.+
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR 327 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence 8877654332 23333333 3567999999999999999999987766653
Q ss_pred CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCC
Q 018784 269 HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENH 308 (350)
Q Consensus 269 h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 308 (350)
|...|++++|+ ++++|++|+.|+.|++||+...+.....
T Consensus 328 ~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 328 SLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp SGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred cCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEE
Confidence 55668889999 7789999999999999999877655443
No 74
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=268.53 Aligned_cols=243 Identities=16% Similarity=0.243 Sum_probs=186.8
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC-------CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEE
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~-------~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~ 86 (350)
+|.++|.+++|+| ++.+||+|+.|++|+||+... .+++..+.+|.+.|.+++|+|++.+|+||+.|++|+
T Consensus 56 ~h~~~v~~v~~sp---~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRP---HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECT---TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECC---CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 3999999999987 899999999999999999842 456778999999999999999999999999999999
Q ss_pred EeeCCCC----Ceeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCC-CCCeeecCCCCcEEEEEEeCCC-Cc
Q 018784 87 LWDALTG----DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPD-APPREVGNSSGSIRTVAWLHSD-QT 159 (350)
Q Consensus 87 vWd~~~~----~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~ 159 (350)
+||+... +....+ .|...|.+++|+|++.+|++|+.|++|++||+.... ........|.+.|.+++|.+.. ..
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 9998432 233333 588999999999999999999999999999986432 1233456788999999998753 56
Q ss_pred EEEEEeCCCeEEEEECCCC--------ceeEeec--CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcc--eeeee-ec
Q 018784 160 ILSSCTDSGGVRLWDARSG--------KIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFG--LVKGY-NM 226 (350)
Q Consensus 160 ~~~s~~~dg~i~iwd~~~~--------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~--~~~~~-~~ 226 (350)
.+++++.|++|++||++++ .+...+. +...|.+++|++++.+++++.|+.|++||..+.. ..... ..
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 7899999999999998764 3334443 4568999999988877788889999999987653 22222 12
Q ss_pred CC--CCceeEecCC-CCcEEEEecCCCeEEEEEccc
Q 018784 227 PC--NTESASLEPK-LGNIFIAGGEDMWVHVFDFHT 259 (350)
Q Consensus 227 ~~--~~~~~~~~~~-~~~~l~sg~~d~~i~v~d~~~ 259 (350)
+. ....+.+.+. ++++|++|+.|+.|++||+.+
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 22 2334556654 578999999999999999864
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-35 Score=296.58 Aligned_cols=284 Identities=13% Similarity=0.112 Sum_probs=209.0
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCcee-----------eeccCccCCeEEEEECCC-CcEEEEeeC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI-----------GTFEGHKGAVWSCCLDAN-ALFSASGSA 81 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~-----------~~l~gH~~~V~~v~~~~~-~~~l~s~s~ 81 (350)
.|.+.|++++|+| ++.+|++|+.|++|++||+.++++. ..+.+|.+.|++++|+|+ +.++++|+.
T Consensus 96 ~~~~~V~~v~~sp---~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 96 FVPGKITSIDTDA---SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp ECSSCEEEEECCT---TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS
T ss_pred cCCCCEEEEEECC---CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC
Confidence 3778999999986 9999999999999999999988764 456889999999999996 578899999
Q ss_pred CCeEEEeeCCCCCeeeeee-c------------------cccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCe-ee
Q 018784 82 DFTAKLWDALTGDEKHSFE-H------------------KHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-EV 141 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~~-h------------------~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-~~ 141 (350)
||+| +||+.+++....+. | ...|.+++|+|++++|++|+.|++|++||+.+++.... ..
T Consensus 173 dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l 251 (902)
T 2oaj_A 173 YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTV 251 (902)
T ss_dssp SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECS
T ss_pred CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEee
Confidence 9999 99999887766653 2 46799999999999999999999999999976543211 00
Q ss_pred ----c------------CCCCcEEEEEEeCC----CCcEEEEEeC-----------------------------------
Q 018784 142 ----G------------NSSGSIRTVAWLHS----DQTILSSCTD----------------------------------- 166 (350)
Q Consensus 142 ----~------------~~~~~v~~~~~~~~----~~~~~~s~~~----------------------------------- 166 (350)
. .+...|.+++|.+. +..++++|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~ 331 (902)
T 2oaj_A 252 FETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANP 331 (902)
T ss_dssp SCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSC
T ss_pred cccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCc
Confidence 0 12346778877531 1244455433
Q ss_pred -----------------------------------------CCeEEEEECCCCceeEe-------ec-CCCCeEEE----
Q 018784 167 -----------------------------------------SGGVRLWDARSGKIVQT-------LE-TKSPVTSA---- 193 (350)
Q Consensus 167 -----------------------------------------dg~i~iwd~~~~~~~~~-------~~-~~~~v~~~---- 193 (350)
|++|++||+.++..... +. ++..++++
T Consensus 332 ~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~ 411 (902)
T 2oaj_A 332 KQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAAS 411 (902)
T ss_dssp SEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEE
T ss_pred cceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEE
Confidence 34455555444422111 00 11233333
Q ss_pred ------------------------------EEecCCcEEEEE-cCCcEEEEECCCccee--eeee---------cC-CCC
Q 018784 194 ------------------------------EVSRDGRYITTA-DGSSVKFWDANHFGLV--KGYN---------MP-CNT 230 (350)
Q Consensus 194 ------------------------------~~~~~~~~l~~~-~~~~i~vwd~~~~~~~--~~~~---------~~-~~~ 230 (350)
+|+|++++++++ .|++|++||+.+.... ..+. .+ ...
T Consensus 412 ~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V 491 (902)
T 2oaj_A 412 VPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAV 491 (902)
T ss_dssp EEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCE
T ss_pred cCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCce
Confidence 446778777654 6899999999776321 1111 11 223
Q ss_pred ceeEecCCCCcEEEEecCCCeEEEEEcccCe---------------------------------------------eEEe
Q 018784 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGE---------------------------------------------QIGC 265 (350)
Q Consensus 231 ~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~---------------------------------------------~~~~ 265 (350)
..+.+.| ++++||+|+.|++|+|||+.+++ ++..
T Consensus 492 ~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 570 (902)
T 2oaj_A 492 DKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA 570 (902)
T ss_dssp EEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE
T ss_pred eEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEE
Confidence 4566666 58999999999999999998762 3567
Q ss_pred ecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 266 NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 266 ~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+.+|.++|++|+|||+| +||+|+.|++|+|||+..+.
T Consensus 571 l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 571 VHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp ECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred EEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe
Confidence 88999999999999999 99999999999999986543
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.7e-36 Score=275.55 Aligned_cols=277 Identities=17% Similarity=0.262 Sum_probs=216.9
Q ss_pred eeEEEecccCCCc-cEEEEEeCCCCeeEeeCCCC----ceeeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCC
Q 018784 19 VVDLFYSPITPDG-FFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 19 v~~~~~~~~s~dg-~~lasgs~d~~v~iw~~~~~----~~~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
...++++| +. .++++++.||.|+||+.... +.+..+.+|.+.|.+++|+| ++.++++|+.||+|++||+.+
T Consensus 37 ~~~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 37 SGFCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp SCSEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred CCcEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 33455554 54 35556899999999998653 34556889999999999999 899999999999999999987
Q ss_pred C-------Ceeeee-eccccEeEEEEcCCC-CeEEEeeCCCeEEEEECCCCCCCCeee-cCCCCcEEEEEEeCCCCcEEE
Q 018784 93 G-------DEKHSF-EHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILS 162 (350)
Q Consensus 93 ~-------~~~~~~-~h~~~V~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 162 (350)
+ .....+ .|...|.+++|+|++ .+|++++.|+.|++||+.++....... ..|...+.+++|++ ++.+++
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 192 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALIC 192 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEE
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEE
Confidence 6 334444 589999999999998 699999999999999998654432221 56888999999986 556777
Q ss_pred EEeCCCeEEEEECCCCceeEee-cCC-C-CeEEEEEecCCcEEEEE----cCCcEEEEECCCcce-eeeeec--CCCCce
Q 018784 163 SCTDSGGVRLWDARSGKIVQTL-ETK-S-PVTSAEVSRDGRYITTA----DGSSVKFWDANHFGL-VKGYNM--PCNTES 232 (350)
Q Consensus 163 s~~~dg~i~iwd~~~~~~~~~~-~~~-~-~v~~~~~~~~~~~l~~~----~~~~i~vwd~~~~~~-~~~~~~--~~~~~~ 232 (350)
+++.|++|++||+++++.+..+ ..+ . .+..+.|+|++++++++ .++.|++||+++... +..... ......
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 8889999999999999988887 443 3 37899999999999887 678999999988654 333332 233445
Q ss_pred eEecCCCCcEE-EEecCCCeEEEEEcccCee-EEeecC--CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 233 ASLEPKLGNIF-IAGGEDMWVHVFDFHTGEQ-IGCNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 233 ~~~~~~~~~~l-~sg~~d~~i~v~d~~~~~~-~~~~~~--h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
+.+.+. ++++ ++|+.|+.|++||+.+++. +..+.. |..+|.+++|+|++.++++ .|+.+++|++...
T Consensus 273 ~~~s~~-~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 273 PFFDPD-TNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EEEETT-TTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT
T ss_pred EEEcCC-CCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC
Confidence 566664 5555 5777899999999998874 444433 5689999999999998764 5669999998653
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-34 Score=270.50 Aligned_cols=275 Identities=21% Similarity=0.333 Sum_probs=224.6
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEEC--CCCcEEEEeeCCCeEEEee
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD--ANALFSASGSADFTAKLWD 89 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~--~~~~~l~s~s~Dg~v~vWd 89 (350)
+.+|.++|.+++|+| ++ +|++|+.|++|++||..+++++..+.+|.+.|.++++. +++.++++++.||+|++||
T Consensus 158 ~~~h~~~V~~l~~~~---~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 158 LSGHDGGVWALKYAH---GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp ECCCSSCEEEEEECS---TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EeCCCcCEEEEEEcC---CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 579999999999986 66 89999999999999999999999999999999999997 6789999999999999999
Q ss_pred CCCCCeee------------------------eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCC
Q 018784 90 ALTGDEKH------------------------SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS 145 (350)
Q Consensus 90 ~~~~~~~~------------------------~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~ 145 (350)
+.+..... ...|...|.++ ++++.++++|+.|+.|++||+.+... ......|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~ 310 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC-LYILSGHT 310 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE-EEEECCCS
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE-EEEecCCC
Confidence 87665321 12466667766 67889999999999999999986543 33445688
Q ss_pred CcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeee
Q 018784 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (350)
Q Consensus 146 ~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~ 224 (350)
..+.+++|.+ ++..+++|+.|++|++||+++++++..+.. ...+..+.+++ ..+++++.|+.|++||+++.......
T Consensus 311 ~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 311 DRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeee
Confidence 8999999986 556788899999999999999999988875 46788888874 34555677899999999987766655
Q ss_pred ecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe-ecCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 225 NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
..........+.+ +++++++|+ |+.|++||+.+++.+.. +..|...|++++|+ ...++++++.|+.+.+|-
T Consensus 389 ~~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 389 HHTNLSAITTFYV-SDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp ECTTCCCEEEEEE-CSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred cCCCCccEEEEEe-CCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 5444444455555 578888888 89999999999999876 67899999999997 445667777888776664
No 78
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-35 Score=266.61 Aligned_cols=241 Identities=21% Similarity=0.298 Sum_probs=199.4
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
...|.+++|+| +|++||+|+.|++|+|||..+++.+..+.+|...|.+++|+|++.++++++.|++|++||+.+++.
T Consensus 123 ~~~v~~v~~s~---dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 123 DLYIRSVCFSP---DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp CCBEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceeEEEEEECC---CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 34589999986 999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeeeeccccEeEEEEcC-CCCeEEEeeCCCeEEEEECCCCCCCCee------ecCCCCcEEEEEEeCCCCcEEEEEeCCC
Q 018784 96 KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPRE------VGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (350)
Q Consensus 96 ~~~~~h~~~V~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~s~~~dg 168 (350)
...+.+...+.+++|+| ++.+|++|+.|++|++||+.++...... ...|...|.+++|++ ++.++++|+.|+
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~ 278 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDR 278 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCC
Confidence 88888888999999999 8999999999999999999765432211 145788999999986 556788999999
Q ss_pred eEEEEECCCCc------------eeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCC-cee
Q 018784 169 GVRLWDARSGK------------IVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNT-ESA 233 (350)
Q Consensus 169 ~i~iwd~~~~~------------~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~-~~~ 233 (350)
+|++||+++.. +...+. +...+.+++++|++.+++++ .|+.|++||.++...+..+..+... ..+
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 99999997642 233333 44679999999999887654 6899999999998887777655443 334
Q ss_pred EecC-----CCCcEEEEecCCCeEEEEEcccC
Q 018784 234 SLEP-----KLGNIFIAGGEDMWVHVFDFHTG 260 (350)
Q Consensus 234 ~~~~-----~~~~~l~sg~~d~~i~v~d~~~~ 260 (350)
.+.+ +++++|++|+.|++|++|++...
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 4443 25789999999999999998653
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=260.39 Aligned_cols=287 Identities=20% Similarity=0.318 Sum_probs=223.9
Q ss_pred eeccCccCCeEEEEECCCCc-EEEEeeC---CCeEEEeeCCCCCeee--eeeccccEeEEEEcCC---CCeEEEeeCCCe
Q 018784 55 GTFEGHKGAVWSCCLDANAL-FSASGSA---DFTAKLWDALTGDEKH--SFEHKHIVRACAFSED---THLLLTGGFEKI 125 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~-~l~s~s~---Dg~v~vWd~~~~~~~~--~~~h~~~V~~~~~~~~---~~~l~sg~~d~~ 125 (350)
..+.+|...|.+++|+|++. ++++|+. ||.|++||+.+++... .+.|...|.+++|+|+ +.+|++|+.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 45678999999999999885 5567776 9999999999887543 3478999999999998 699999999999
Q ss_pred EEEEECCCCCCCCeeecCCCCcEEEEEEeC-----CCCcEEEEEeCCCeEEEEECCCCc-eeEeecC-----CCCeEEEE
Q 018784 126 LRIFDLNRPDAPPREVGNSSGSIRTVAWLH-----SDQTILSSCTDSGGVRLWDARSGK-IVQTLET-----KSPVTSAE 194 (350)
Q Consensus 126 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~s~~~dg~i~iwd~~~~~-~~~~~~~-----~~~v~~~~ 194 (350)
|++||+............|...|.++.|.+ +++.++++++.|++|++||+++++ .+..+.. ...+.++.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 999999877645566678899999998753 567788999999999999999886 6666653 23788888
Q ss_pred ----EecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCC--CCcEEEEecCCCeEEEEEcccCeeEEeec
Q 018784 195 ----VSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPK--LGNIFIAGGEDMWVHVFDFHTGEQIGCNK 267 (350)
Q Consensus 195 ----~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~d~~i~v~d~~~~~~~~~~~ 267 (350)
|+|++++++++ .++.|++||+++...............+.+.+. +++++++|+.|+.|++||+++++.+..+.
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee
Confidence 67888887765 578999999999887665555555566677763 57899999999999999998877654443
Q ss_pred -----CCCcCEEEEEEcCCCC-EEEEecCCCcEEEecCCCCCcccCCC--CCCCc--cccccccccccceeeeeeEEEcc
Q 018784 268 -----GHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTNPPNHEENHS--GTGNA--QTGKLKASTDEVTRKIEGFHINK 337 (350)
Q Consensus 268 -----~h~~~v~~l~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~i~~~~~~~ 337 (350)
+|...|++++|+|+++ +|++|+.||.|++||+.......... +.... ...........+...|.++.++|
T Consensus 252 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 252 SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP 331 (357)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS
T ss_pred eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC
Confidence 8999999999999998 89999999999999987654332111 11111 11133444556777899999999
Q ss_pred cchh
Q 018784 338 EGKA 341 (350)
Q Consensus 338 ~g~~ 341 (350)
+|+.
T Consensus 332 ~~~~ 335 (357)
T 3i2n_A 332 DKRG 335 (357)
T ss_dssp SSTT
T ss_pred CCCe
Confidence 9874
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.3e-34 Score=286.77 Aligned_cols=287 Identities=20% Similarity=0.289 Sum_probs=236.2
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.+.+|..+|.+++|+| +|.+|++|+.|++|++|+..+++.+..+.+|.+.|++++|+|++.++++++.||+|++||+
T Consensus 50 ~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred EEecCCCcEEEEEEeC---CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 4578999999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-eeeee-eccccEeEEEEcC-CCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCC-CCcEEEEEeC
Q 018784 91 LTGD-EKHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTILSSCTD 166 (350)
Q Consensus 91 ~~~~-~~~~~-~h~~~V~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~~~ 166 (350)
.++. ....+ .|...|.+++|+| ++..|++++.|++|++||+..+.........+...+..++|.+. ++.++++++.
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 8773 33444 5888999999999 88999999999999999998766555555556578999999862 6678889999
Q ss_pred CCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC-CceeEecCCCCcEE
Q 018784 167 SGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIF 243 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 243 (350)
||+|++||+++++.+..+.. ...+..++|+|++.+++++ .++.|++||+.++..+..+..+.. ...+.+.+....++
T Consensus 207 dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceE
Confidence 99999999999998888874 5689999999999877665 589999999999888877766543 34455666544544
Q ss_pred EEecCCCeEEEEEcccCee----------EE---------------------------------eecCCCcCEEEEEEcC
Q 018784 244 IAGGEDMWVHVFDFHTGEQ----------IG---------------------------------CNKGHHGPVHCVRFSP 280 (350)
Q Consensus 244 ~sg~~d~~i~v~d~~~~~~----------~~---------------------------------~~~~h~~~v~~l~~sp 280 (350)
++.+.++.+.+|++..+.. +. .+..+...+.+++|+|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 366 (814)
T 3mkq_A 287 IASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSP 366 (814)
T ss_dssp EEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECT
T ss_pred EEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECC
Confidence 5555577788888754321 11 1123445688999999
Q ss_pred CCCEEEEecCCCcEEEecCCC
Q 018784 281 GGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 281 ~~~~lasgs~Dg~v~vw~~~~ 301 (350)
+++++++++ |+.+.+|++..
T Consensus 367 dg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 367 NGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp TSSEEEEEE-TTEEEEEETTT
T ss_pred CCCEEEEec-CCEEEEEECcc
Confidence 999999988 89999999753
No 81
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.1e-35 Score=286.08 Aligned_cols=242 Identities=25% Similarity=0.355 Sum_probs=207.3
Q ss_pred EeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.+.||..+|.+++|+| +|++|+||+.|++|+|||+.+++.+..+.+|...|.+++|++++.+++|+|.|++|++||.
T Consensus 425 ~~~~h~~~v~~v~~s~---~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSS---DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eecCCCCcEEEEEECC---CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 4689999999999986 9999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCeeeee----eccccEeEEEEcCCC--CeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 91 LTGDEKHSF----EHKHIVRACAFSEDT--HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 91 ~~~~~~~~~----~h~~~V~~~~~~~~~--~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
......... .|...|.+++|+|++ ..|++++.|++|++||+.+... ......|.+.|.+++|++ ++.++++|
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~-~~~~~~h~~~v~~v~~sp-dg~~l~sg 579 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-RSTLAGHTGYVSTVAVSP-DGSLCASG 579 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECT-TSSEEEEE
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE-EEEEcCCCCCEEEEEEeC-CCCEEEEE
Confidence 644332221 478889999999987 5799999999999999986543 344567889999999986 56788899
Q ss_pred eCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCC---------------
Q 018784 165 TDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN--------------- 229 (350)
Q Consensus 165 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~--------------- 229 (350)
+.|++|++||+++++.+..+..+..+.+++|+|++.+++++.++.|++||+++...+..+.....
T Consensus 580 ~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp ETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred eCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 99999999999999999998888899999999999999999888999999999877765543211
Q ss_pred -----CceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 230 -----TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 230 -----~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
...+.+++ ++++|++|+.|+.|++||+.
T Consensus 660 ~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 660 RKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred ceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEecc
Confidence 12234444 68999999999999999985
No 82
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-35 Score=271.80 Aligned_cols=248 Identities=15% Similarity=0.165 Sum_probs=181.4
Q ss_pred CCccEEEEEeCCCCeeEeeCCCCce-----eeeccCccCCeEEEEECC--------CCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 29 PDGFFLVSASKDSSPMLRNGETGDW-----IGTFEGHKGAVWSCCLDA--------NALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 29 ~dg~~lasgs~d~~v~iw~~~~~~~-----~~~l~gH~~~V~~v~~~~--------~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
+++.+||+|+.|++|+|||..+++. +..+.||++.|++++|+| ++++|||+|.|++|||||+.++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 4678999999999999999887754 456899999999999987 789999999999999999977664
Q ss_pred e-eeeeccccEeEEEEcCCC-CeEEEeeCCCeEEEEECCCCCCCCee------------------------ecCCCCcEE
Q 018784 96 K-HSFEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPRE------------------------VGNSSGSIR 149 (350)
Q Consensus 96 ~-~~~~h~~~V~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~~~------------------------~~~~~~~v~ 149 (350)
. ..+.|...|.+++|+|++ .+|++|+.|++|++||+.++...... ...|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 4 456799999999999987 47999999999999999765432211 124566788
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-CCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCC
Q 018784 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC 228 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~ 228 (350)
++.|.++++..+++++.|+++++||+++++....+..+ ..+..+.+.|+.+.+ ....
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~~~ 316 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI----------------------SLFP 316 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE----------------------CSSC
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc----------------------cccC
Confidence 89999888889999999999999999887765554332 233334444432221 1111
Q ss_pred CCceeEecCC-CCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 229 NTESASLEPK-LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 229 ~~~~~~~~~~-~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
......+.+. ++.++++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|+|++||+++.|| +.+|++
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 1222233333 445677889999999999999998888889999999999999999999999877 555543
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.2e-34 Score=265.88 Aligned_cols=259 Identities=20% Similarity=0.312 Sum_probs=207.3
Q ss_pred eeccCCceeEEEecccCCC-ccEEEEEeCCCCeeEeeCCC----------CceeeeccCccCCeEEEEECCCCc-EEEEe
Q 018784 12 CHGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGET----------GDWIGTFEGHKGAVWSCCLDANAL-FSASG 79 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~d-g~~lasgs~d~~v~iw~~~~----------~~~~~~l~gH~~~V~~v~~~~~~~-~l~s~ 79 (350)
..+|.++|++++|+| + +.+||+++.|+.|+||+..+ .+.+..+.+|...|.+++|++++. +|++|
T Consensus 124 ~~~h~~~v~~l~~~p---~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMP---QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEET---TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEcCCCcEEEEEECC---CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 468999999999997 5 68999999999999999876 677888999999999999999988 99999
Q ss_pred eCCCeEEEeeCCCCCe-------eeee-eccccEeEEEEcC-CCCeEEEeeCCCeEEEEECCCCC--CCCeeecCCCCcE
Q 018784 80 SADFTAKLWDALTGDE-------KHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPD--APPREVGNSSGSI 148 (350)
Q Consensus 80 s~Dg~v~vWd~~~~~~-------~~~~-~h~~~V~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~~~~~~v 148 (350)
+.||+|++||+.++.. ...+ .|...|.+++|+| ++.+|++++.|+.|++||+.... ........|...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987432 1222 5888999999999 77899999999999999998653 3444556788899
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEECCC-CceeEeec-CCCCeEEEEEecCCc-EE-EEEcCCcEEEEECCCcceeeee
Q 018784 149 RTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGR-YI-TTADGSSVKFWDANHFGLVKGY 224 (350)
Q Consensus 149 ~~~~~~~~~~~~~~s~~~dg~i~iwd~~~-~~~~~~~~-~~~~v~~~~~~~~~~-~l-~~~~~~~i~vwd~~~~~~~~~~ 224 (350)
.+++|++.+..++++|+.||+|++||+++ ++++..+. +...+.+++|+|++. ++ +++.++.|++||++........
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 99999988888999999999999999998 45566665 467899999999874 33 3445777888877543211100
Q ss_pred ecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEEecCCCcEEEecCCC
Q 018784 225 NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~lasgs~Dg~v~vw~~~~ 301 (350)
. .. .+ .....+..+.+|...|++++|+|+++ +|++++.|+.|+||++..
T Consensus 361 ~----------~~----------~~--------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 361 E----------DA----------ED--------GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp H----------HH----------HH--------CCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred c----------cc----------cc--------CCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 0 00 00 01244556678999999999999999 899999999999999753
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-33 Score=260.35 Aligned_cols=262 Identities=15% Similarity=0.232 Sum_probs=212.1
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
+.+.+|.+.|++|+|+| +|.+||+|+.|++|+|||..+++++..+.+|...|.++++ ++.++++|+.|+.+++||
T Consensus 141 ~~~~~~~~~V~sv~fsp---dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EECCSTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EEecCCCCcEEEEEECC---CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEee
Confidence 34468999999999987 9999999999999999999999999999999999988776 568999999999999999
Q ss_pred CCCCCe-eeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC---CeeecCCCCcEEEEEEeCCCCcEEEE-
Q 018784 90 ALTGDE-KHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTILSS- 163 (350)
Q Consensus 90 ~~~~~~-~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~s- 163 (350)
...... ...+ .|...+..+.++|++.++++++.|+.+++|++...... ......+.+.|.+++|.+.+..++++
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 876543 3333 58899999999999999999999999999999765432 34456788899999999888887765
Q ss_pred -EeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE---cCCcEEEEECCCcceeeeeecCCCCc-eeEecCC
Q 018784 164 -CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA---DGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPK 238 (350)
Q Consensus 164 -~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~ 238 (350)
|+.|++|++||++++++...+..+..+.++.|+++++.++++ .++.|++||.++..++..+..+.... .+.+.|
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp- 374 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP- 374 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-
T ss_pred eecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-
Confidence 457999999999999999999999999999999999877654 47899999999999988887665443 445555
Q ss_pred CCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEE
Q 018784 239 LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVR 277 (350)
Q Consensus 239 ~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~ 277 (350)
++++|++|+.|++|++||+.+.++......+...+....
T Consensus 375 dg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s 413 (420)
T 4gga_A 375 DGATVASAAADETLRLWRCFELDPARRREREKASAAKSS 413 (420)
T ss_dssp TSSCEEEEETTTEEEEECCSCSSCC--------------
T ss_pred CCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccc
Confidence 689999999999999999987766555554544443333
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=273.62 Aligned_cols=297 Identities=10% Similarity=0.060 Sum_probs=222.1
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
+.-...|.+|+|+| ||+++||+|.|++|+ |++.+ ..+++|.+.|++++|+|+| .|+.+++|+...
T Consensus 12 ~~~~~~v~sv~~Sp---DG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~ 76 (588)
T 2j04_A 12 KEFEDWKNNLTWAR---DGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ 76 (588)
T ss_dssp CCCSSSSCCEEECT---TSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS
T ss_pred hHhhccEEEEEECC---CCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCC
Confidence 34567899999987 999999999999999 65544 4558999999999999998 567766666432
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCC-----cEEEEEEeCCCCcEEEEEeCC
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG-----SIRTVAWLHSDQTILSSCTDS 167 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~s~~~d 167 (350)
.....+.|...|.+++|+|+|++||+++.||.|++||... ...... |.. .+.+++|+| ++.++++|+.|
T Consensus 77 -~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~D 150 (588)
T 2j04_A 77 -NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNED 150 (588)
T ss_dssp -SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETT
T ss_pred -ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCC
Confidence 2333446788899999999999999999999999999643 222223 333 599999986 56788889999
Q ss_pred CeEEEEECCCCce-------eEeec-----CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCccee---eeee-cC-CCC
Q 018784 168 GGVRLWDARSGKI-------VQTLE-----TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV---KGYN-MP-CNT 230 (350)
Q Consensus 168 g~i~iwd~~~~~~-------~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~---~~~~-~~-~~~ 230 (350)
|+|++||+.+++. +.++. +...|.+++|+|+| +++++.|+.|++||+...... +.+. .+ ...
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 9999999998853 45553 23589999999999 888889999999999876632 2332 22 234
Q ss_pred ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEE--cCCCCEEEEecCCCcEEEecCCCCCcccCC
Q 018784 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRF--SPGGESYASGSEDGTIRIWQTNPPNHEENH 308 (350)
Q Consensus 231 ~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~--sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 308 (350)
..+.+. ++++++++ +++|++||+.++.......+|...|+.++| +|++..++++++||+ ++|..+.-. ...
T Consensus 230 ~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~--~sp 302 (588)
T 2j04_A 230 TDLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELH--VTA 302 (588)
T ss_dssp CCEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEE--EEC
T ss_pred EEEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEE--ECC
Confidence 455555 57888887 699999999988875445489999999999 999999999999999 999875211 000
Q ss_pred CC----C-------CCccccccccccccceeeeeeEEEcccch
Q 018784 309 SG----T-------GNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 309 ~~----~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
.+ . .+.+ +......+. ...|.|..++|||+
T Consensus 303 d~~l~a~~d~~v~lW~~~-g~~l~~~~~-~~~I~~va~SPdG~ 343 (588)
T 2j04_A 303 DNIIAPYLEKKFKKWSTI-WNEFNNYET-TLVIHGISLSPDGY 343 (588)
T ss_dssp CCSSHHHHHHHHHHTTTT-TTSSSSSCC-EEEEEEEEECTTSS
T ss_pred CceEEEEcCCEEEEEECC-CCceeeecc-ceEEEEEEECCCCC
Confidence 00 0 0111 111222223 66689999999995
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-34 Score=262.55 Aligned_cols=283 Identities=18% Similarity=0.265 Sum_probs=220.8
Q ss_pred eeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC------eeee-eeccccEeEEEEcCC----C---CeEE
Q 018784 53 WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD------EKHS-FEHKHIVRACAFSED----T---HLLL 118 (350)
Q Consensus 53 ~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~------~~~~-~~h~~~V~~~~~~~~----~---~~l~ 118 (350)
....+.+|.+.|++++|++ .++++++.||+|++||+.+++ .... ..|...|.+++|+|+ + .+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4567899999999999988 899999999999999998877 3333 468999999999999 9 9999
Q ss_pred EeeCCCeEEEEECCCCCCC----CeeecCC-----CCcEEEEEEe----CCCCcEEEEEeCCCeEEEEECCC------Cc
Q 018784 119 TGGFEKILRIFDLNRPDAP----PREVGNS-----SGSIRTVAWL----HSDQTILSSCTDSGGVRLWDARS------GK 179 (350)
Q Consensus 119 sg~~d~~v~vwd~~~~~~~----~~~~~~~-----~~~v~~~~~~----~~~~~~~~s~~~dg~i~iwd~~~------~~ 179 (350)
+++.|+.|++||+...... ......+ ...|.+++|. +.+...+++++.|+.|++||+++ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 9999999999999765541 2333445 4889999998 54443288899999999999998 66
Q ss_pred eeE-----eec--------CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeec-------CCCCceeEecCC
Q 018784 180 IVQ-----TLE--------TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNM-------PCNTESASLEPK 238 (350)
Q Consensus 180 ~~~-----~~~--------~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~ 238 (350)
.+. .+. +...+.+++|+|++ +++++ .++.|++||+++...+..+.. ......+.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~- 243 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP- 243 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS-
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC-
Confidence 554 553 36789999999999 66655 578999999999888887776 33344555665
Q ss_pred CCcEEEEecCC---CeEEEEEcccCeeEEeecC-------------CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 239 LGNIFIAGGED---MWVHVFDFHTGEQIGCNKG-------------HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 239 ~~~~l~sg~~d---~~i~v~d~~~~~~~~~~~~-------------h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
++++|++++.| +.|++||+.+++.+..+.+ |...|.+++|+|++++|++|+.|+.|++||+...
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 58999999999 9999999999999999988 9999999999999999999999999999999765
Q ss_pred CcccCCC------CCCC-ccccccccccccceeeeeeEEEcccch
Q 018784 303 NHEENHS------GTGN-AQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 303 ~~~~~~~------~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
+...... ++.. ...+.. .....+...|.++.++|+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDE-HGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCT-TSCBCSSCCEEEEEEECTTT
T ss_pred ceeEEEecccCcccchhhhhcccc-ccccccCCceeEEEeccccc
Confidence 5433322 1100 000000 00122367789999999983
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=288.46 Aligned_cols=248 Identities=18% Similarity=0.276 Sum_probs=197.2
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCC--CCceeeeccCccCCeEEEEECCC--CcEEEEeeCCCeE
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~--~~~~~~~l~gH~~~V~~v~~~~~--~~~l~s~s~Dg~v 85 (350)
.++.||.++|++++|+| +|.+|++|+.|++|+||+.. +++.+..+.+|.+.|++++|+++ +.++++|+.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~---dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS---SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC---CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 35689999999999886 89999999999999999987 56788899999999999999987 9999999999999
Q ss_pred EEeeCCCCC--eeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCC-CCeeecCCCCcEEEEEEeCC---
Q 018784 86 KLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHS--- 156 (350)
Q Consensus 86 ~vWd~~~~~--~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~--- 156 (350)
++||+.++. ....+ .|...|.+++|+|+ +.++++|+.|+.|++||+..... .......|...+.+++|.+.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999998875 33333 58899999999999 99999999999999999987633 23445678889999999875
Q ss_pred ---------CCcEEEEEeCCCeEEEEECCCCc----eeEeec-CCCCeEEEEEecC---CcEEEEEcCCcEEEEECCCcc
Q 018784 157 ---------DQTILSSCTDSGGVRLWDARSGK----IVQTLE-TKSPVTSAEVSRD---GRYITTADGSSVKFWDANHFG 219 (350)
Q Consensus 157 ---------~~~~~~s~~~dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~~~~---~~~l~~~~~~~i~vwd~~~~~ 219 (350)
++.++++|+.||+|++||++++. ....+. +..++.+++|+|+ +.++
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l----------------- 222 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL----------------- 222 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-----------------
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE-----------------
Confidence 56788899999999999998773 334444 3467888888887 4444
Q ss_pred eeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe-----eEEeecCCCcCEEEEEEcCCCCEEEEecCCCcE
Q 018784 220 LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE-----QIGCNKGHHGPVHCVRFSPGGESYASGSEDGTI 294 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v 294 (350)
++|+.|+.|++||+.++. .......|...|++++|+|++++|++|+.||.|
T Consensus 223 ------------------------~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 223 ------------------------ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp ------------------------EEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred ------------------------EEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 444444444444444332 122334688899999999999999999999999
Q ss_pred EEecCCC
Q 018784 295 RIWQTNP 301 (350)
Q Consensus 295 ~vw~~~~ 301 (350)
++|++..
T Consensus 279 ~vwd~~~ 285 (753)
T 3jro_A 279 TLWKENL 285 (753)
T ss_dssp ECCBCCS
T ss_pred EEEecCC
Confidence 9999874
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.6e-33 Score=249.52 Aligned_cols=283 Identities=19% Similarity=0.315 Sum_probs=211.4
Q ss_pred CCCCceeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCe-----eeee-eccccEeEEEEcCCCCeEEEe
Q 018784 48 GETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDE-----KHSF-EHKHIVRACAFSEDTHLLLTG 120 (350)
Q Consensus 48 ~~~~~~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~-----~~~~-~h~~~V~~~~~~~~~~~l~sg 120 (350)
.+..++..+|+||++.|++++|+|+ +.+|+|||.|++|+|||+.+.+. ...+ .|...|.+++|+|++++|+++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3445566789999999999999997 68999999999999999876542 2233 488999999999999999999
Q ss_pred eCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee-c-CCCCeEEEEEecC
Q 018784 121 GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-E-TKSPVTSAEVSRD 198 (350)
Q Consensus 121 ~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~ 198 (350)
+.|+.|++|+....... .....+...+..+.+.+ .+..+++++.|+.+++||+......... . +...+..++++++
T Consensus 105 ~~d~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp ETTSEEEEEETTTTEEE-EEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred cccccceEEeeccccee-eeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 99999999998754332 23344555666666654 5567788999999999999876543332 2 3467888999876
Q ss_pred C--cEE-EEEcCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEE
Q 018784 199 G--RYI-TTADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVH 274 (350)
Q Consensus 199 ~--~~l-~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~ 274 (350)
+ .++ +++.++.|++||+++...+..+..+... ..+.+.+ ++++|++|+.|+.|++||+.+++.+..+..+ ..|.
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~ 260 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 260 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEE
Confidence 5 344 4567899999999998888777655443 3445555 6899999999999999999999988877754 5799
Q ss_pred EEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccchh
Q 018784 275 CVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 275 ~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~ 341 (350)
+++|+|++. +++++.|+.|++||+............ ........+...|.++.++|||+.
T Consensus 261 ~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 261 ALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQE------VISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp EEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------------CCCCCEEEEEECTTSSE
T ss_pred eeecCCCCc-eeeccCCCEEEEEECCCCeEEEecccc------ceeeeccCCCCCEEEEEECCCCCE
Confidence 999999876 556677999999998765433222111 111223446667888889998863
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.8e-34 Score=255.03 Aligned_cols=251 Identities=16% Similarity=0.159 Sum_probs=208.4
Q ss_pred eeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC----eeeeeeccccEeEEEEcCCCC-eEEEeeCCCeEEEE
Q 018784 55 GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD----EKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIF 129 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~----~~~~~~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vw 129 (350)
....+|.+.|.+++|+|++.++++++.|+.|++||+.++. ......|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998877 555668999999999999999 99999999999999
Q ss_pred EC-CCCCCCCeeecC--CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCC---------CceeEeecCCCCeEEEEEec
Q 018784 130 DL-NRPDAPPREVGN--SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS---------GKIVQTLETKSPVTSAEVSR 197 (350)
Q Consensus 130 d~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~~~ 197 (350)
|+ ..... ..... |...|.+++|.+ +.++++++.|++|++||+++ ++++..+.+...+.+++++|
T Consensus 85 d~~~~~~~--~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 85 DLIGSPSF--QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp CSSSSSSE--EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred EeccCCce--EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecC
Confidence 99 75432 44556 889999999997 67888899999999999998 77777777888999999999
Q ss_pred CCcEEEEEcCCcEEEEECCC-ccee-eeeec--CCCCceeEecCCCCcEEEEecCCCeEEEEEcccC------eeEEeec
Q 018784 198 DGRYITTADGSSVKFWDANH-FGLV-KGYNM--PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG------EQIGCNK 267 (350)
Q Consensus 198 ~~~~l~~~~~~~i~vwd~~~-~~~~-~~~~~--~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~------~~~~~~~ 267 (350)
++ +++++.++.|++||+++ .... ..... ......+.+.+.+++++++++.|+.|++|++... +....+.
T Consensus 161 ~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 161 SR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp SE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred Cc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 88 77777899999999987 4432 11221 2223445555525789999999999999999876 6677777
Q ss_pred CCCc---------CEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCC
Q 018784 268 GHHG---------PVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSG 310 (350)
Q Consensus 268 ~h~~---------~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~ 310 (350)
+|.. .|.+++|+|++++|++|+.||.|++||+...+......+
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 7755 999999999999999999999999999976665444333
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-33 Score=257.41 Aligned_cols=254 Identities=15% Similarity=0.108 Sum_probs=203.2
Q ss_pred eeCCCCceeeeccCccCCeEEEEECCCC-cEEEEeeCCCeEEEeeCCCCCeeeee---eccccEeEEEEcC-CCCeEEEe
Q 018784 46 RNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSF---EHKHIVRACAFSE-DTHLLLTG 120 (350)
Q Consensus 46 w~~~~~~~~~~l~gH~~~V~~v~~~~~~-~~l~s~s~Dg~v~vWd~~~~~~~~~~---~h~~~V~~~~~~~-~~~~l~sg 120 (350)
|+..+.+....+.+|.+.|.+++|++++ .++++|+.||.|++||+.+++....+ .|...|.+++|+| ++++|+++
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 4445667788899999999999999998 99999999999999999988766665 4899999999999 78999999
Q ss_pred eCCCeEEEEECCCCCCCCeeec---CCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEe
Q 018784 121 GFEKILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVS 196 (350)
Q Consensus 121 ~~d~~v~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~ 196 (350)
+.|+.|++||+... ...... .+...+.+++|++ ++.++++++.|++|++||++ ++.+..+. +...+.+++|+
T Consensus 138 ~~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 138 SIRGATTLRDFSGS--VIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp ETTTEEEEEETTSC--EEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEEC
T ss_pred eCCCEEEEEECCCC--ceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEEC
Confidence 99999999999842 222222 2347799999986 55688889999999999994 66666665 46789999999
Q ss_pred cCCc-EEE-EEcCCcEEEEECCC----cceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCC
Q 018784 197 RDGR-YIT-TADGSSVKFWDANH----FGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHH 270 (350)
Q Consensus 197 ~~~~-~l~-~~~~~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~ 270 (350)
|+++ +++ ++.|+.|++||+++ ..++..+........+.+.+.++++|++++.|+.|++||+.+++.+..+.+|.
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 9997 555 45689999999987 55555554444455667776468999999999999999999887766655443
Q ss_pred -----------------cCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcc
Q 018784 271 -----------------GPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 271 -----------------~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
..+..++|+|++++ +|+.|+.|++||+...+..
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee
Confidence 34455777777776 8899999999998766543
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-33 Score=243.72 Aligned_cols=244 Identities=21% Similarity=0.372 Sum_probs=199.3
Q ss_pred CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEE
Q 018784 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIF 129 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vw 129 (350)
.++..++.+|.+.|.+++| +++.++++++.||.|++||+.++.....+ .|...|.+++|+|++++|++++.|+.|++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 4677899999999999999 99999999999999999999887755554 588999999999999999999999999999
Q ss_pred ECCCCC--CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEec-CCcEEE-E
Q 018784 130 DLNRPD--APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSR-DGRYIT-T 204 (350)
Q Consensus 130 d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~-~ 204 (350)
++.... ........|...+.++.| ++.++++++.|++|++|| .++....+. +..++..+.+.| ++.+++ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 987643 223455678889999998 355788999999999999 556555555 457899999987 676665 4
Q ss_pred EcCCcEEEEECCCcceeeeeec--CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNM--PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGG 282 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~ 282 (350)
+.++.|++||.. .....+.. ......+.+.+. +. +++++.|+.|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 162 ~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 162 SADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDD-GH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp ETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEET-TE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred ECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCC-Ce-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 568999999944 33444433 222334455543 44 9999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCcEEEecCCCCCcc
Q 018784 283 ESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 283 ~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
.|++++.||.|++||+...+..
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEE
T ss_pred -CEEEEecCCEEEEEECCCCcee
Confidence 6899999999999998766544
No 92
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.7e-33 Score=250.38 Aligned_cols=278 Identities=15% Similarity=0.237 Sum_probs=215.9
Q ss_pred eeCCCCceeeeccCccCCeEEEEECCC---CcEEEEeeCCCeEEEeeCCC-CCee-ee-eeccccEeEEEEcCCCCeEEE
Q 018784 46 RNGETGDWIGTFEGHKGAVWSCCLDAN---ALFSASGSADFTAKLWDALT-GDEK-HS-FEHKHIVRACAFSEDTHLLLT 119 (350)
Q Consensus 46 w~~~~~~~~~~l~gH~~~V~~v~~~~~---~~~l~s~s~Dg~v~vWd~~~-~~~~-~~-~~h~~~V~~~~~~~~~~~l~s 119 (350)
|+....+.+..+.+|.+.|.+++|+|+ +.+|++|+.||.|++||+.+ +... .. ..|...|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 344566778889999999999999999 69999999999999999987 4443 33 358999999999999999999
Q ss_pred eeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEe-CCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecC
Q 018784 120 GGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL-HSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRD 198 (350)
Q Consensus 120 g~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 198 (350)
++.|+.|++||+.+... .....|...+.+++|. .+++.++++++.|++|++||+++++.+..+..+..+..+.+.++
T Consensus 104 ~~~dg~v~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQA--IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp EETTSEEEEEETTTTEE--EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred EcCCCcEEEEEcCCCCc--eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 99999999999986543 2345688899999994 35677888999999999999999999999988888888877765
Q ss_pred CcEEEEEcCCcEEEEECCCcceeeeeec-C--CCCceeEecCC---CCcEEEEecCCCeEEEEEcccC---eeEEeecCC
Q 018784 199 GRYITTADGSSVKFWDANHFGLVKGYNM-P--CNTESASLEPK---LGNIFIAGGEDMWVHVFDFHTG---EQIGCNKGH 269 (350)
Q Consensus 199 ~~~l~~~~~~~i~vwd~~~~~~~~~~~~-~--~~~~~~~~~~~---~~~~l~sg~~d~~i~v~d~~~~---~~~~~~~~h 269 (350)
.++++..++.+++||++.......... . .......+.+. ....+++|+.|+.|++||+... ..+..+.+|
T Consensus 182 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 182 -MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp -EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred -eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence 556667788999999987543322211 1 11122222211 1244999999999999999887 456677777
Q ss_pred Cc------------CEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcc
Q 018784 270 HG------------PVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINK 337 (350)
Q Consensus 270 ~~------------~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 337 (350)
.. +|.+++|+|++++|++|+.||.|++||+....... ....+...|.++.++|
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~---------------~~~~~~~~v~~~~~s~ 325 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK---------------TSEQLDQPISACCFNH 325 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE---------------ECCCCSSCEEEEEECT
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE---------------EecCCCCCceEEEECC
Confidence 76 79999999999999999999999999986544332 2233455677777777
Q ss_pred cchh
Q 018784 338 EGKA 341 (350)
Q Consensus 338 ~g~~ 341 (350)
||+.
T Consensus 326 ~g~~ 329 (368)
T 3mmy_A 326 NGNI 329 (368)
T ss_dssp TSSC
T ss_pred CCCe
Confidence 7753
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=256.79 Aligned_cols=279 Identities=9% Similarity=0.030 Sum_probs=220.2
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc---eeeeccC---------------------------------
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEG--------------------------------- 59 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~---~~~~l~g--------------------------------- 59 (350)
..|+.+++|+| +|++|+++ .++.|++||..+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~---dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSR---DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECS---SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecC---CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 35889999886 99977665 57899999999998 6655543
Q ss_pred ---------------------ccCCeEEEEECCCCcEE-EEeeCCCeEEEeeCC--CCCeeeee---eccccEeEEEEcC
Q 018784 60 ---------------------HKGAVWSCCLDANALFS-ASGSADFTAKLWDAL--TGDEKHSF---EHKHIVRACAFSE 112 (350)
Q Consensus 60 ---------------------H~~~V~~v~~~~~~~~l-~s~s~Dg~v~vWd~~--~~~~~~~~---~h~~~V~~~~~~~ 112 (350)
|.+.|++++|+|++.+| ++++.||+|++||+. ++.....+ .|...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 44479999999999986 999999999999998 77776665 5678899999999
Q ss_pred CCCeEEEeeCCCeEEEEECCCCCCCC---eeecCCCCcEEEEEEeCC--CCcEEEEEeCCCeEEEEECCCCceeEeec--
Q 018784 113 DTHLLLTGGFEKILRIFDLNRPDAPP---REVGNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKIVQTLE-- 185 (350)
Q Consensus 113 ~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~~~~~~v~~~~~~~~--~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-- 185 (350)
++++|++|+.|+.+++|++....... .....|...|.+++|++. .+.++++|+.|++|++||+++++.+..+.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 99999999999999999997655322 244567889999999975 26788899999999999999998877633
Q ss_pred CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecC--------------------------CCCceeEecCC
Q 018784 186 TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP--------------------------CNTESASLEPK 238 (350)
Q Consensus 186 ~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 238 (350)
+...+.+++|+ ++++|+++ .|+.|++||+++++++..+... .....+.+.+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK- 317 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-
Confidence 55789999999 99887654 6889999999998877766532 1122334444
Q ss_pred CCcEEEEec-CCCeEEEEEc--ccC---eeEEeecCCCcCEEEEEEcCCCCEEEEecC------CCcEEEecCCC
Q 018784 239 LGNIFIAGG-EDMWVHVFDF--HTG---EQIGCNKGHHGPVHCVRFSPGGESYASGSE------DGTIRIWQTNP 301 (350)
Q Consensus 239 ~~~~l~sg~-~d~~i~v~d~--~~~---~~~~~~~~h~~~v~~l~~sp~~~~lasgs~------Dg~v~vw~~~~ 301 (350)
+++++++++ .|+.|++|++ .++ ..+..+.+| ..|.+++|+|++.+++.++. +..|.+|.+..
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 577888777 8999999999 555 666777788 88999999996544444443 55689997653
No 94
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.1e-33 Score=244.65 Aligned_cols=220 Identities=19% Similarity=0.216 Sum_probs=174.6
Q ss_pred eeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCC--Ceeeee-eccccEeEEEEcC--CCCeEEEeeCCCeEEEE
Q 018784 55 GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG--DEKHSF-EHKHIVRACAFSE--DTHLLLTGGFEKILRIF 129 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~--~~~~~~-~h~~~V~~~~~~~--~~~~l~sg~~d~~v~vw 129 (350)
..+.+|.+.|++++|++++.+||||+.|++|+|||+... +....+ .|...|.+++|+| ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 467899999999999999999999999999999998643 344454 5999999999986 48999999999999999
Q ss_pred ECCCCCC-CCeeecCCCCcEEEEEEeCCC-CcEEEEEeCCCeEEEEECCCCce--eEee-cCCCCeEEEEEecCCcEEEE
Q 018784 130 DLNRPDA-PPREVGNSSGSIRTVAWLHSD-QTILSSCTDSGGVRLWDARSGKI--VQTL-ETKSPVTSAEVSRDGRYITT 204 (350)
Q Consensus 130 d~~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~ 204 (350)
|+.++.. .......|...|.+++|.+.. +.++++++.|++|++||++++.. ...+ .+...+.+++|+|++..-.
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~- 161 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED- 161 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc-
Confidence 9986542 233455688899999998753 67889999999999999987632 2233 3456789999998752110
Q ss_pred EcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe----eEEeecCCCcCEEEEEEcC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE----QIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~----~~~~~~~h~~~v~~l~~sp 280 (350)
+ . ...+..+++|++|+.|+.|++||++++. ....+.+|..+|.+++|+|
T Consensus 162 --~-~------------------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 162 --G-E------------------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp -----------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred --c-c------------------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 0 0 0001236789999999999999998765 5667889999999999999
Q ss_pred CC---CEEEEecCCCcEEEecCCCC
Q 018784 281 GG---ESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 281 ~~---~~lasgs~Dg~v~vw~~~~~ 302 (350)
++ .+|||||.|++|+|||+...
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCceEEEEEECCCcEEEEEeCCC
Confidence 84 88999999999999998653
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=270.21 Aligned_cols=227 Identities=11% Similarity=0.030 Sum_probs=174.3
Q ss_pred CCcEEEEeeCCCeEEEeeCCCCCee----eee-eccccEeEEEEcCC------CCeEEEeeCCCeEEEEECCCCCCC---
Q 018784 72 NALFSASGSADFTAKLWDALTGDEK----HSF-EHKHIVRACAFSED------THLLLTGGFEKILRIFDLNRPDAP--- 137 (350)
Q Consensus 72 ~~~~l~s~s~Dg~v~vWd~~~~~~~----~~~-~h~~~V~~~~~~~~------~~~l~sg~~d~~v~vwd~~~~~~~--- 137 (350)
++.+++|++.|++|+|||+.+++.. ..+ .|.+.|.+++|+|+ +.+||+++.|++|++||+......
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 3445566789999999999777642 223 35788999999997 579999999999999999765321
Q ss_pred -------CeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCc-eeEeec-CCCCeEEE--EEecCC-cEEE-E
Q 018784 138 -------PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK-IVQTLE-TKSPVTSA--EVSRDG-RYIT-T 204 (350)
Q Consensus 138 -------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~l~-~ 204 (350)
......|...|.+++|+++ ..+++|+.||+|++||+++++ +...+. +..+|.++ .++|++ .+|+ +
T Consensus 252 ~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 252 FKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp EECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 2244567889999999864 368899999999999999764 344444 45789998 467877 6655 5
Q ss_pred EcCCcEEEEECCCcceeeeeecCC---CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNMPC---NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPG 281 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~ 281 (350)
+.|++|++||+++..++..+..+. ....+.+.| +++.+++++.|++|++||++++.++.++.+|.+.|++|+|+|+
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 579999999999877655543322 234567776 4778999999999999999999888888899999999999999
Q ss_pred CCEEEEecCCCcEEEecCCC
Q 018784 282 GESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 282 ~~~lasgs~Dg~v~vw~~~~ 301 (350)
+++|+|||.|++|++||...
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCBCEEEETTTEEECCBSCS
T ss_pred CCeEEEEECCCEEEEEechH
Confidence 99999999999999999754
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-33 Score=254.11 Aligned_cols=272 Identities=15% Similarity=0.251 Sum_probs=212.5
Q ss_pred eccCccCCeEEEEECCC----CcEEEEeeCCCeEEEeeCCCCCeeeeee------ccccEeEEEEcCC----CCeEEEee
Q 018784 56 TFEGHKGAVWSCCLDAN----ALFSASGSADFTAKLWDALTGDEKHSFE------HKHIVRACAFSED----THLLLTGG 121 (350)
Q Consensus 56 ~l~gH~~~V~~v~~~~~----~~~l~s~s~Dg~v~vWd~~~~~~~~~~~------h~~~V~~~~~~~~----~~~l~sg~ 121 (350)
..++|.+.|.+++|+|+ ...+++++.++.|++||+.++.....+. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 45689999999999984 4456666677799999998777655443 5678999999998 67999999
Q ss_pred CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee----cCCCCeEEEEEec
Q 018784 122 FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSR 197 (350)
Q Consensus 122 ~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~ 197 (350)
.|+.|++||+.+.+. ......|...|.+++|++.++.++++++.|++|++||+++++.+..+ .+...+.+++|+|
T Consensus 93 ~dg~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 93 SRGIIRIINPITMQC-IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TTCEEEEECTTTCCE-EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCCEEEEEEchhceE-eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 999999999986544 33455688999999999867888999999999999999999988887 3567899999999
Q ss_pred CCcEEEEE-cCCcEEEEECCCcceeeeee-----------------------------cCCCCceeEecCCCCcEEEEec
Q 018784 198 DGRYITTA-DGSSVKFWDANHFGLVKGYN-----------------------------MPCNTESASLEPKLGNIFIAGG 247 (350)
Q Consensus 198 ~~~~l~~~-~~~~i~vwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~l~sg~ 247 (350)
++++++++ .++.|++||+++......+. .......+.+. ++++++++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 248 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKS 248 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEEC
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEe
Confidence 99877655 68999999998865443222 11122333443 67999999
Q ss_pred CCCeEEEEEcccCee--------------EEeecCCCcCEEEEEEcCC--CCEEEEecCCCcEEEecCCCCCcccCCCCC
Q 018784 248 EDMWVHVFDFHTGEQ--------------IGCNKGHHGPVHCVRFSPG--GESYASGSEDGTIRIWQTNPPNHEENHSGT 311 (350)
Q Consensus 248 ~d~~i~v~d~~~~~~--------------~~~~~~h~~~v~~l~~sp~--~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~ 311 (350)
.|+.|++||+.++.. +..+.+|...|++++|+|+ +++|++|+.||.|++||+.........
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--- 325 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK--- 325 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE---
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc---
Confidence 999999999987643 6778899999999999999 999999999999999998765432110
Q ss_pred CCccccccccccccceeeeeeEEEcccch
Q 018784 312 GNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
........+...|.++.++|+|+
T Consensus 326 ------~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 326 ------CTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp ------EEEECCTTCCSCEEEEEECTTSS
T ss_pred ------ceEEcccccCCceEEEEeCCCCC
Confidence 00111112256788888888875
No 97
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=258.09 Aligned_cols=256 Identities=16% Similarity=0.189 Sum_probs=203.5
Q ss_pred eeEeeCCCCceeeeccCccCCeEEEEECCCCc-EEEEeeCCCeEEEeeC----CCCC------eeeeee-----------
Q 018784 43 PMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDA----LTGD------EKHSFE----------- 100 (350)
Q Consensus 43 v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~-~l~s~s~Dg~v~vWd~----~~~~------~~~~~~----------- 100 (350)
+.+|+............|.+.|.+++|+|++. ++++|+.||.|++||+ .+++ ....+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (425)
T 1r5m_A 27 DSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGK 106 (425)
T ss_dssp -------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-----
T ss_pred cccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccC
Confidence 45677655554444455679999999999999 9999999999999999 8777 344443
Q ss_pred ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce
Q 018784 101 HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (350)
Q Consensus 101 h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~ 180 (350)
|...|.+++|+|++++|++++.|+.|++||.. .........|...+.+++|.+ ++.++++++.|+.|++||+++++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT--GALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcE
Confidence 46689999999999999999999999999943 233345567888999999986 556777888999999999999998
Q ss_pred eEeecCCCC----------------eEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCC-ceeEecCCCCcEE
Q 018784 181 VQTLETKSP----------------VTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIF 243 (350)
Q Consensus 181 ~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 243 (350)
+..+..+.. +..+.|++++.+++++.++.|++||+++...+..+..+... ..+.+.+ ++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l 262 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKLL 262 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCEE
Confidence 888775432 88899999999888888999999999988777666544333 3455555 57899
Q ss_pred EEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 244 IAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 244 ~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
++++.|+.|++||+.+++.+..+.+|...|.+++|+|++ ++++++.|+.|++||+....
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred EEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 999999999999999999988999999999999999999 99999999999999986544
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-33 Score=254.10 Aligned_cols=246 Identities=21% Similarity=0.290 Sum_probs=205.3
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC-
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT- 92 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~- 92 (350)
.|..+|.+++|+| +|.+|++|+.|+.++|||..+++.+..+.+|...|.+++| ++.++++++.||.|++||+..
T Consensus 132 ~~~~~v~~v~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 132 DESTYVASVKWSH---DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp CTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred CCCCCEEEEEECC---CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC
Confidence 4899999999987 9999999999999999999999999999999999999999 567999999999999999984
Q ss_pred CCeeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe--CCCe
Q 018784 93 GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT--DSGG 169 (350)
Q Consensus 93 ~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~--~dg~ 169 (350)
......+ .|...|.+++|+|++.+|++|+.|+.|++||+.+... ......|...+.+++|++.+..++++++ .|+.
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP-KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE-EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc-cEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 3444444 5899999999999999999999999999999986443 3344567889999999988888888876 7999
Q ss_pred EEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE---cCCcEEEEECCCcceeeeee--cCC-CCceeEecCCCCcEE
Q 018784 170 VRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA---DGSSVKFWDANHFGLVKGYN--MPC-NTESASLEPKLGNIF 243 (350)
Q Consensus 170 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~i~vwd~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~l 243 (350)
|++||+++++.+..+.....+.+++|+|++++++++ .++.|++||+.+........ .+. ....+.+.+ ++.+|
T Consensus 286 i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC-CCCEE
Confidence 999999999999999988999999999999988763 48999999998865554433 222 234455665 68999
Q ss_pred EEecCCCeEEEEEcccCeeEEee
Q 018784 244 IAGGEDMWVHVFDFHTGEQIGCN 266 (350)
Q Consensus 244 ~sg~~d~~i~v~d~~~~~~~~~~ 266 (350)
++++.|+.|++||+.+++.+...
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECTTSEEEEEECCC-------
T ss_pred EEEeCCCcEEEEECCCCcccccc
Confidence 99999999999999998876544
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=247.29 Aligned_cols=247 Identities=15% Similarity=0.246 Sum_probs=203.3
Q ss_pred eeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECC
Q 018784 54 IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (350)
Q Consensus 54 ~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~ 132 (350)
...|.+|.+.|.+++|++++.++++++.||.|++||+.+++....+. |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34689999999999999999999999999999999999998887774 89999999999999999999999999999998
Q ss_pred CCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-----CeEEEEECCCCcee-----------EeecC-C--CCeEEE
Q 018784 133 RPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARSGKIV-----------QTLET-K--SPVTSA 193 (350)
Q Consensus 133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~iwd~~~~~~~-----------~~~~~-~--~~v~~~ 193 (350)
++...... .+...+.+++|.+. +..+++++.+ +.|++||++.+... ..+.. . ..+..+
T Consensus 105 ~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 105 NGQCVATW--KSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TCCEEEEE--ECSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCcEEEEe--ecCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 66543322 27788999999864 5566777777 99999999765421 12221 2 279999
Q ss_pred EEecCCcEEEEE-cCCcEEEEECCC-cceeeeeecCCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCC
Q 018784 194 EVSRDGRYITTA-DGSSVKFWDANH-FGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHH 270 (350)
Q Consensus 194 ~~~~~~~~l~~~-~~~~i~vwd~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~ 270 (350)
+|+|++++++++ .++.|++||+++ ...+..+..+... ..+.+.+ ++++|++++.|+.|++||+.+++.+..+. +.
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE-CS
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeec-CC
Confidence 999999887655 678999999998 6666666654443 3455555 68999999999999999999998887777 77
Q ss_pred cCEEEEEEcCCCCEEEEecCCC--------------cEEEecCCCCCcc
Q 018784 271 GPVHCVRFSPGGESYASGSEDG--------------TIRIWQTNPPNHE 305 (350)
Q Consensus 271 ~~v~~l~~sp~~~~lasgs~Dg--------------~v~vw~~~~~~~~ 305 (350)
..+.+++|+|+++++++++.++ .+++||.......
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 8899999999999999999998 7999988665544
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-34 Score=256.03 Aligned_cols=261 Identities=10% Similarity=0.042 Sum_probs=204.9
Q ss_pred cCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC---------CCCeee
Q 018784 27 ITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL---------TGDEKH 97 (350)
Q Consensus 27 ~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~---------~~~~~~ 97 (350)
..+++.+|++|+.|++|++||..+++.+..+. ...|.++.++|+ +++++.|++|++|+.. ++....
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 34578999999999999999999999888877 567777888887 8999999999999764 333233
Q ss_pred e--eeccccEeEEEEcC--CCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEE
Q 018784 98 S--FEHKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (350)
Q Consensus 98 ~--~~h~~~V~~~~~~~--~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iw 173 (350)
. ..|...|.+++|+| ++++|++++.|++|++||+.++.........+...+.+++|++ ++.++++|+.|++|++|
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEE
Confidence 3 24667899999999 9999999999999999999876553223345566789999875 67788999999999999
Q ss_pred ECCCCcee-EeecC--CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeec------CCCCceeEecCCCCcEEE
Q 018784 174 DARSGKIV-QTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM------PCNTESASLEPKLGNIFI 244 (350)
Q Consensus 174 d~~~~~~~-~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~ 244 (350)
|+++++.+ ..+.. ..+|.+++|+|++.+|+++.++.|++||+++...+..+.. +.....+.+.+ ++++|+
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~ 276 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-SGKNMI 276 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-TSSEEE
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECC-CCCEEE
Confidence 99999877 66654 6789999999999999887777999999998776544321 11112356665 588999
Q ss_pred EecC-CCeEEEEEcccCeeEEeecCCCcCEEEEEEcC---CCCEEEEecCCCcEEEec
Q 018784 245 AGGE-DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP---GGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 245 sg~~-d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp---~~~~lasgs~Dg~v~vw~ 298 (350)
+++. |+.|++|++......... .++..++|+| +...+++++.|+.++++-
T Consensus 277 ~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred EecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 9888 999999999765432222 5678889998 888999999999999884
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=5e-32 Score=247.30 Aligned_cols=270 Identities=12% Similarity=0.099 Sum_probs=223.5
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEE-EEeeCCCeEEEeeCCCCCeeeeeeccccEeEEE
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHKHIVRACA 109 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l-~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~ 109 (350)
..++++++.|++|++||..+++++..+.+|.. +.+++|++++.++ ++++.|++|++||+.+++....+.+...+.+++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceE
Confidence 35789999999999999999999999988854 8999999999865 788899999999999998888887777999999
Q ss_pred EcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCC
Q 018784 110 FSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKS 188 (350)
Q Consensus 110 ~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~ 188 (350)
|+|++++|+ +++.++.|++||+.+++... .. .+...+..++|++.+..++++++.|+.|++||+++++.+..+..+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TV-KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEE-EE-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEE-EE-eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 999999875 45567999999998654322 22 2345688999988777777899999999999999999998888888
Q ss_pred CeEEEEEecCCcEE-EEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEec---CCCeEEEEEcccCeeE
Q 018784 189 PVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG---EDMWVHVFDFHTGEQI 263 (350)
Q Consensus 189 ~v~~~~~~~~~~~l-~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~---~d~~i~v~d~~~~~~~ 263 (350)
.+..++|+|+++++ +++ .++.|++||+++...+..+........+.+.+ +++++++++ .++.|++||+.+++.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 88999999999876 444 46899999999988777766555455566666 466666666 6899999999999988
Q ss_pred EeecCCCcCEEEEEEcCCCCEE-EEecCCCcEEEecCCCCCcc
Q 018784 264 GCNKGHHGPVHCVRFSPGGESY-ASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 264 ~~~~~h~~~v~~l~~sp~~~~l-asgs~Dg~v~vw~~~~~~~~ 305 (350)
..+..|. .+.+++|+|++++| ++++.|+.|++||+...+..
T Consensus 238 ~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 238 ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 8887765 47999999999877 68899999999998765443
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3e-32 Score=246.35 Aligned_cols=274 Identities=11% Similarity=0.147 Sum_probs=203.7
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEE-EEeeCCCeEEEeeC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDA 90 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l-~s~s~Dg~v~vWd~ 90 (350)
+.+|..+|.+++|+| ||.+||+|+.|+ ++||+.++++....... ..+..+++.+++..+ ++++.|++|++||.
T Consensus 15 ~~~h~~~V~~v~fs~---dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQ---DQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ----CCCCCEEEECT---TSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred cccCCCceEEEEECC---CCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 378999999999997 999999998775 78999988776654432 357778888877766 67888999999999
Q ss_pred CCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCC-CCCCeeecCCCCcEEEEEEeCCCCcEEEE-EeCCC
Q 018784 91 LTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP-DAPPREVGNSSGSIRTVAWLHSDQTILSS-CTDSG 168 (350)
Q Consensus 91 ~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~s-~~~dg 168 (350)
.+++.+..+.+...|.+++|+++. ++++ .|+.|++||+.+. ...... .. ....+++.+ ..++++ |+.||
T Consensus 89 ~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~-~~---~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 89 VKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDD-IR---FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCC-EE---EEEEEEEET--TEEEEEESSCTT
T ss_pred CCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEe-cc---CCceEEEEc--cEEEEeCCCcCc
Confidence 999998888899999999999875 3333 4789999999865 332222 21 233344444 444444 78999
Q ss_pred eEEEEECCCCc----------------eeEeec-CCCCeEEEEEecCCcEEEEE-cCCc-EEEEECCCcceeeeeec--C
Q 018784 169 GVRLWDARSGK----------------IVQTLE-TKSPVTSAEVSRDGRYITTA-DGSS-VKFWDANHFGLVKGYNM--P 227 (350)
Q Consensus 169 ~i~iwd~~~~~----------------~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~-i~vwd~~~~~~~~~~~~--~ 227 (350)
+|++||+++++ .+..+. +..+|.+++|+|++++|+++ .|++ |++||++++.++..+.. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999999865 144554 45789999999999988765 5888 99999999998888772 3
Q ss_pred -CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeE--Eeec---------------------CCCcCEEEEEEcCCCC
Q 018784 228 -CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI--GCNK---------------------GHHGPVHCVRFSPGGE 283 (350)
Q Consensus 228 -~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~--~~~~---------------------~h~~~v~~l~~sp~~~ 283 (350)
.....+.+.| ++++|++++.|++|++||+..+... ..+. .+......++|+|+++
T Consensus 240 ~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 240 RADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CSCEEEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCcEEEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 3344556665 6899999999999999999765321 1111 1122346799999999
Q ss_pred EEEEecCCCcEEEecCCC
Q 018784 284 SYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 284 ~lasgs~Dg~v~vw~~~~ 301 (350)
++++++.||.+++|++..
T Consensus 319 ~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 319 LVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEEETTTTEEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEc
Confidence 999999999999998754
No 103
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.7e-32 Score=248.13 Aligned_cols=249 Identities=16% Similarity=0.140 Sum_probs=202.0
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceee--eccCccCCeEEEEECCCCcEEEEeeCCCeEEE
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG--TFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~--~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~v 87 (350)
..+.+|..+|.+++|+| ++++|++++.|+++++||..++++.. .+.+|...|.+++|++++.++++++.|+.|++
T Consensus 46 ~~~~~h~~~v~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 122 (372)
T 1k8k_C 46 HELKEHNGQVTGVDWAP---DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 122 (372)
T ss_dssp EEEECCSSCEEEEEEET---TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred eeecCCCCcccEEEEeC---CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEE
Confidence 34579999999999997 89999999999999999998887544 45789999999999999999999999999999
Q ss_pred eeCCCCCe---eee--eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCC-----------------CCCCeeecCCC
Q 018784 88 WDALTGDE---KHS--FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP-----------------DAPPREVGNSS 145 (350)
Q Consensus 88 Wd~~~~~~---~~~--~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-----------------~~~~~~~~~~~ 145 (350)
||+..+.. ... ..|...|.+++|+|++++|++++.|+.|++||+... .........|.
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 99987763 222 247889999999999999999999999999997421 12223344678
Q ss_pred CcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-CCeEEEEEecCCcEEEEEcCCcEEEEECCC--cc--e
Q 018784 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTADGSSVKFWDANH--FG--L 220 (350)
Q Consensus 146 ~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~--~~--~ 220 (350)
..+.+++|++ ++.++++++.|+.|++||+++++++..+..+ .++.+++|+|++++++++.++.|++||++. .. .
T Consensus 203 ~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~ 281 (372)
T 1k8k_C 203 GWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF 281 (372)
T ss_dssp SCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEE
T ss_pred CeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEE
Confidence 8899999986 4567888899999999999999988888754 589999999999999999999999999977 31 1
Q ss_pred e------------------------------------eee-ecCCC-CceeEecCCCC---cEEEEecCCCeEEEEEccc
Q 018784 221 V------------------------------------KGY-NMPCN-TESASLEPKLG---NIFIAGGEDMWVHVFDFHT 259 (350)
Q Consensus 221 ~------------------------------------~~~-~~~~~-~~~~~~~~~~~---~~l~sg~~d~~i~v~d~~~ 259 (350)
+ ..+ ..+.. ...+.+.+.++ .+|++|+.|+.|++||+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 282 GGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 1 001 11122 23444566666 9999999999999999987
Q ss_pred Cee
Q 018784 260 GEQ 262 (350)
Q Consensus 260 ~~~ 262 (350)
++.
T Consensus 362 ~~~ 364 (372)
T 1k8k_C 362 LES 364 (372)
T ss_dssp HHH
T ss_pred hhH
Confidence 654
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=255.89 Aligned_cols=243 Identities=12% Similarity=0.193 Sum_probs=190.8
Q ss_pred CccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC-----------eeeee-ecc------------ccEeEEEEcCCC
Q 018784 59 GHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD-----------EKHSF-EHK------------HIVRACAFSEDT 114 (350)
Q Consensus 59 gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~-----------~~~~~-~h~------------~~V~~~~~~~~~ 114 (350)
.|.+.|.+++|++++.+||+|+.||.|+|||+.++. ....+ .|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998765 23333 476 779999999998
Q ss_pred --CeEEEeeCCCeEEEEECCCCCCC---------------------------------------CeeecCCCCcEEEEEE
Q 018784 115 --HLLLTGGFEKILRIFDLNRPDAP---------------------------------------PREVGNSSGSIRTVAW 153 (350)
Q Consensus 115 --~~l~sg~~d~~v~vwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~~~ 153 (350)
.+|++++.|++|++||+...... ......|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998642110 0112468889999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEECCC-CceeEee--------cCCCCeEEEEEecCC-cEEEE-EcCCcEEEEECCCcce--
Q 018784 154 LHSDQTILSSCTDSGGVRLWDARS-GKIVQTL--------ETKSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGL-- 220 (350)
Q Consensus 154 ~~~~~~~~~s~~~dg~i~iwd~~~-~~~~~~~--------~~~~~v~~~~~~~~~-~~l~~-~~~~~i~vwd~~~~~~-- 220 (350)
++ ++.++++| .|++|++||+++ ++.+..+ .+...+.+++|+|++ +++++ +.++.|++||+++...
T Consensus 186 ~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 87 55677777 799999999994 4444432 345689999999998 66655 5689999999998775
Q ss_pred --eeeeecCC-------------CCceeEecCCCCcEEEEecCCCeEEEEEccc-CeeEEeecCCCcC------------
Q 018784 221 --VKGYNMPC-------------NTESASLEPKLGNIFIAGGEDMWVHVFDFHT-GEQIGCNKGHHGP------------ 272 (350)
Q Consensus 221 --~~~~~~~~-------------~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~-~~~~~~~~~h~~~------------ 272 (350)
+..+..+. ....+.+.+ ++++|++++. +.|++||+.+ ++.+..+.+|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 45555443 334556665 6889999998 9999999997 8888888888642
Q ss_pred ---EEEEEEcCCCCEEEEecCCCcEEEecCCCCCcc
Q 018784 273 ---VHCVRFSPGGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 273 ---v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
+..++|+|++++|++|+.||.|++||+...+..
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 335999999999999999999999999876543
No 105
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-33 Score=255.90 Aligned_cols=241 Identities=12% Similarity=0.148 Sum_probs=186.8
Q ss_pred ccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCC--Ceeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC
Q 018784 57 FEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG--DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR 133 (350)
Q Consensus 57 l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~--~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 133 (350)
+..|.++|++++|+|++.++++++.|+.|++||+.++ +....+ .|...|.+++|+|++++|++++.|++|++||+..
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446789999999999999999999999999999877 444444 5899999999999999999999999999999987
Q ss_pred CC--CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCc---eeEeec--CCCCeEEEEEecCCcEEEE-E
Q 018784 134 PD--APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK---IVQTLE--TKSPVTSAEVSRDGRYITT-A 205 (350)
Q Consensus 134 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~~-~ 205 (350)
.. ........|...+.+++|++ ++.++++++.|++|++||+++++ ....+. +...+.+++|+|+++++++ +
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 55 12334456888999999986 55677788999999999999886 355555 4678999999999987765 4
Q ss_pred cCCcEEEEECCC------------------cceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCee----E
Q 018784 206 DGSSVKFWDANH------------------FGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ----I 263 (350)
Q Consensus 206 ~~~~i~vwd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~----~ 263 (350)
.|+.|++||++. ..++..+........+.+.+ ++++|++++.|+.|++||+.+++. +
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 689999999852 33333331112234455555 588999999999999999999887 7
Q ss_pred EeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 264 GCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 264 ~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
..+.+|..+|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 7888999999999999999999999877766 66554
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.9e-31 Score=244.68 Aligned_cols=277 Identities=12% Similarity=0.110 Sum_probs=223.7
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceee-----eccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-----TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~-----~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
..+.+++|+| ++.++++++.|++|++||..+++... .+.+|.+.|.+++|++++.++++++.|+.|++||+.
T Consensus 123 ~~~~~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 123 FQPKSVRFID---NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SCBCCCEESS---SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeC---CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 3455888886 88899999999999999999999887 567899999999999999999999999999999999
Q ss_pred CCCeeeeee-ccccEeEEEEcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe----
Q 018784 92 TGDEKHSFE-HKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT---- 165 (350)
Q Consensus 92 ~~~~~~~~~-h~~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~---- 165 (350)
+++....+. |...+.+++|+|+++.++ +++.|+.|++||+.++... .. ......+..++|++.+..+++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI-RK-TDKIGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE-EE-CCCCSEEEEEEECTTSSEEEEEEEESCT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE-EE-ecCCCCceEEEEcCCCCEEEEEECCCCc
Confidence 888777764 778899999999999885 5558999999999765432 22 223456889999876555554443
Q ss_pred ---CCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEE-EE-EcCCcEEEEECCCcceeeeeecCCCCceeEecCCCC
Q 018784 166 ---DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLG 240 (350)
Q Consensus 166 ---~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~-~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
.|+.|++||+++++.+..+.....+..++|+|+++.+ ++ +.++.|++||+.+.+.+..+........+.+.+. +
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d-g 356 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPD-G 356 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT-S
T ss_pred cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCC-C
Confidence 5789999999999888877666688899999999654 44 4578999999998888777765555556666664 6
Q ss_pred cEEEEecC---------------CCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEec-CCCcEEEecCC
Q 018784 241 NIFIAGGE---------------DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGS-EDGTIRIWQTN 300 (350)
Q Consensus 241 ~~l~sg~~---------------d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs-~Dg~v~vw~~~ 300 (350)
+++++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++ .|+.|++|+++
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 66666554 57999999999998887776 45799999999999988776 49999999975
No 107
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-30 Score=231.42 Aligned_cols=246 Identities=15% Similarity=0.250 Sum_probs=206.0
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
+.+.+|...|.+++|+| +|++||+|+.|++|+||+.++++++..+.+|...+.++.. ++.++++++.++.+++|+
T Consensus 61 ~~~~~~~~~V~~v~~~~---~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~ 135 (318)
T 4ggc_A 61 LQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHD 135 (318)
T ss_dssp EECCSTTCCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EEecCCCCeEEEEEECC---CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeee
Confidence 34568999999999987 9999999999999999999999999999999999876554 567999999999999999
Q ss_pred CCCCCee-ee-eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCC---CeeecCCCCcEEEEEEeCCCCcEE--E
Q 018784 90 ALTGDEK-HS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTIL--S 162 (350)
Q Consensus 90 ~~~~~~~-~~-~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~--~ 162 (350)
....... .. ..|...+..+.+++++++|++++.|++|++||+.+++.. ......+.+.+..+.+.+.+..++ +
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 215 (318)
T 4ggc_A 136 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 215 (318)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEE
T ss_pred cCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEE
Confidence 8766533 33 368899999999999999999999999999999765432 234456778899999988776655 4
Q ss_pred EEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE---cCCcEEEEECCCcceeeeeecCCCCc-eeEecCC
Q 018784 163 SCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA---DGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPK 238 (350)
Q Consensus 163 s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~ 238 (350)
+++.+++|++||.+.............+..+.+.+++..++++ .++.|++||+++++++..+..+.... .+.+.+
T Consensus 216 ~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp- 294 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP- 294 (318)
T ss_dssp ECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-
T ss_pred ecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-
Confidence 6678899999999999988888888899999999998876543 47899999999999988887655443 445555
Q ss_pred CCcEEEEecCCCeEEEEEcccCe
Q 018784 239 LGNIFIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 239 ~~~~l~sg~~d~~i~v~d~~~~~ 261 (350)
++++|++|+.|++|++||+.+.+
T Consensus 295 dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 295 DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCEEEEEecCCeEEEEECCCCC
Confidence 68999999999999999987654
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.6e-31 Score=234.38 Aligned_cols=262 Identities=10% Similarity=0.067 Sum_probs=177.3
Q ss_pred EEEEEeCCCCeeEeeCCCC---ceeeeccCccCCeEEEEECCCC--cEEEEeeCCCeEEEeeCCC-------CCeeeeee
Q 018784 33 FLVSASKDSSPMLRNGETG---DWIGTFEGHKGAVWSCCLDANA--LFSASGSADFTAKLWDALT-------GDEKHSFE 100 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~---~~~~~l~gH~~~V~~v~~~~~~--~~l~s~s~Dg~v~vWd~~~-------~~~~~~~~ 100 (350)
-+++++. .+|++|+..++ +.++++.+|+.+|..+.+.|+- .+.++-|.=..-.++-+.. +..+..-.
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 5566665 78999999988 8899999999988888877742 2222222211111111100 00011112
Q ss_pred ccccEeEEEEcCCCCeEEEee--CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeC--CCCcEEEEEeCCCeEEEEECC
Q 018784 101 HKHIVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLH--SDQTILSSCTDSGGVRLWDAR 176 (350)
Q Consensus 101 h~~~V~~~~~~~~~~~l~sg~--~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~s~~~dg~i~iwd~~ 176 (350)
|...|..+ ++++++.+++ .|+.|++|++............|...+..++|++ .++.++++++.|++|+|||++
T Consensus 135 ~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 135 NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 33333333 4565555533 5899999998542222223334555555555554 567899999999999999999
Q ss_pred CCceeEeecCC----CCeEEEEEecCCcEEEE-------------EcCCcEEEEECCCcceeeeeec--C-CCC-ceeEe
Q 018784 177 SGKIVQTLETK----SPVTSAEVSRDGRYITT-------------ADGSSVKFWDANHFGLVKGYNM--P-CNT-ESASL 235 (350)
Q Consensus 177 ~~~~~~~~~~~----~~v~~~~~~~~~~~l~~-------------~~~~~i~vwd~~~~~~~~~~~~--~-~~~-~~~~~ 235 (350)
+++++.++..+ ..+..++|+|+|+++++ +.|++|++||..+.+.+..+.. + .+. .....
T Consensus 212 TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg 291 (356)
T 2w18_A 212 TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG 291 (356)
T ss_dssp TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE
T ss_pred CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc
Confidence 99999999742 35677889999987643 3467899999998887654421 1 111 11111
Q ss_pred cCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEE-EEEEcCCCCEEEEecCCCcEEEecC
Q 018784 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVH-CVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 236 ~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~-~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
.. .+.++++|+.|++|+|||+.+++.+.++.+|...+. +++|+|+|++|+||+.|++|+|||+
T Consensus 292 ~~-sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 292 DV-KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EE-ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cc-CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 11 256799999999999999999999999999988765 5899999999999999999999985
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=5.4e-30 Score=233.78 Aligned_cols=285 Identities=14% Similarity=0.132 Sum_probs=225.7
Q ss_pred eeccCCceeEEEecccCCCccEE-EEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEE-EEeeCCCeEEEee
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWD 89 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~l-asgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l-~s~s~Dg~v~vWd 89 (350)
+.+|. .+.+++|+| +|++| ++++.|++|++||..+++.+..+..|. .+.+++|+|++.++ ++++.|+.|++||
T Consensus 28 ~~~~~-~~~~~~~s~---dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 28 IPVGS-NPMGAVISP---DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp EECSS-SEEEEEECT---TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eecCC-CcceEEECC---CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEE
Confidence 35554 478999886 88766 788899999999999999998888765 89999999999876 5666789999999
Q ss_pred CCCCCeeeeeeccccEeEEEEcCCCCeE-EEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCC
Q 018784 90 ALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (350)
Q Consensus 90 ~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg 168 (350)
+.+++....+.+...+.+++|+|+++.| ++++.|+.|++||+.+++... ... ....+..++|.+.+..++++++.|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~~-~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVS-VGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEE-CCSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEe-cCCCcceEEECCCCCEEEEEeCCCC
Confidence 9999888888777789999999999977 688889999999997654322 222 2345788999887777778888999
Q ss_pred eEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE----cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEE
Q 018784 169 GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA----DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI 244 (350)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (350)
+|++||+++++.+..+.....+..++|+|++++++++ .++.|++||+++.+.+..+..+.....+.+.+....+++
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEE
Confidence 9999999999998888888889999999999877654 468999999999888777766555556667765334557
Q ss_pred EecCCCeEEEEEcccCeeEEeecCCCcCEE---EEE------------EcCCC----------CEEEEecCCCcEEEecC
Q 018784 245 AGGEDMWVHVFDFHTGEQIGCNKGHHGPVH---CVR------------FSPGG----------ESYASGSEDGTIRIWQT 299 (350)
Q Consensus 245 sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~---~l~------------~sp~~----------~~lasgs~Dg~v~vw~~ 299 (350)
+++.|+.|++||+.+++.+..+..|..+.. .+. |+.+. ..+.+.+.|..+++|+.
T Consensus 261 s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 340 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF 340 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEEC
T ss_pred EcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEEC
Confidence 889999999999999998887776654321 122 22221 23667778999999998
Q ss_pred CCCC
Q 018784 300 NPPN 303 (350)
Q Consensus 300 ~~~~ 303 (350)
..+.
T Consensus 341 ~~g~ 344 (391)
T 1l0q_A 341 GDGS 344 (391)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 6544
No 110
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.1e-32 Score=241.49 Aligned_cols=222 Identities=18% Similarity=0.235 Sum_probs=168.7
Q ss_pred eccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCe--eeee-eccccEeEEEEcC--CCCeEEEeeCCCeEEEEE
Q 018784 56 TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE--KHSF-EHKHIVRACAFSE--DTHLLLTGGFEKILRIFD 130 (350)
Q Consensus 56 ~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~--~~~~-~h~~~V~~~~~~~--~~~~l~sg~~d~~v~vwd 130 (350)
.+.+|.+.|++++|++++.+||||+.|++|+|||+.++.. ...+ .|...|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 5679999999999999999999999999999999987643 3334 5999999999976 489999999999999999
Q ss_pred CCCCCCC-CeeecCCCCcEEEEEEeCCC-CcEEEEEeCCCeEEEEECCCCcee---Eeec-CCCCeEEEEEecCCcEEEE
Q 018784 131 LNRPDAP-PREVGNSSGSIRTVAWLHSD-QTILSSCTDSGGVRLWDARSGKIV---QTLE-TKSPVTSAEVSRDGRYITT 204 (350)
Q Consensus 131 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~iwd~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~ 204 (350)
+.++... ......|...|.+++|+|.+ +.++++|+.|++|++||++.+... ..+. +...+.++.|+|+...
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--- 164 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP--- 164 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC---
Confidence 9865422 23345688899999999763 678999999999999999876422 2222 3456888888887421
Q ss_pred EcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccC---eeEEeecCCCcCEEEEEEcCC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG---EQIGCNKGHHGPVHCVRFSPG 281 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~---~~~~~~~~h~~~v~~l~~sp~ 281 (350)
+. +.+.... ..+..+++|++|+.|+.|++||+..+ ..+..+.+|..+|.+++|+|+
T Consensus 165 ---~~--~~~~~~~----------------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~ 223 (316)
T 3bg1_A 165 ---GS--LIDHPSG----------------QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPS 223 (316)
T ss_dssp -----------CCS----------------CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCC
T ss_pred ---cc--ccccccc----------------cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCC
Confidence 00 0000000 01123578999999999999999755 466778899999999999998
Q ss_pred C----CEEEEecCCCcEEEecCCC
Q 018784 282 G----ESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 282 ~----~~lasgs~Dg~v~vw~~~~ 301 (350)
+ .+|++|+.|++|+||++..
T Consensus 224 ~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 224 IGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCCCceEEEEcCCCeEEEEEccC
Confidence 6 7899999999999999865
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-30 Score=239.11 Aligned_cols=279 Identities=15% Similarity=0.224 Sum_probs=195.0
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECC---CCcEEEEeeCCCeEEEeeC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA---NALFSASGSADFTAKLWDA 90 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~---~~~~l~s~s~Dg~v~vWd~ 90 (350)
+|..+|.+++|+| .++.+|++++.|+.+++||..+++....+. |...+.++.+.+ ++.++++++.|+.|++||+
T Consensus 97 ~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 97 VHRYSVETVQWYP--HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CCSSCEEEEEECT--TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cCCCcEEEEEEcc--CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 6999999999986 356799999999999999999999887776 778899999987 4459999999999999999
Q ss_pred CCCCeeeeee-ccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeee---------------cCCCCcEEEEEE
Q 018784 91 LTGDEKHSFE-HKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREV---------------GNSSGSIRTVAW 153 (350)
Q Consensus 91 ~~~~~~~~~~-h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~---------------~~~~~~v~~~~~ 153 (350)
.+++....+. |...|.+++|+|++. +|++++.|+.|++||+.......... ..|...+.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 9888777664 889999999999998 58899999999999997654332222 467788999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-------CCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeec
Q 018784 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-------SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM 226 (350)
Q Consensus 154 ~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~ 226 (350)
++ ++.++++++.|+.|++||+++++........ .............+++++.++.|++||+.+...+..+..
T Consensus 254 ~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 254 TS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred cC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 86 5667888899999999999998765444321 112222233456777888899999999999988887765
Q ss_pred CCCC-ceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC-CCCEEEEecCCCcEEEecCC
Q 018784 227 PCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP-GGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 227 ~~~~-~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp-~~~~lasgs~Dg~v~vw~~~ 300 (350)
+... ..+.+.+ ++++|++|+.|+.|++||+.+++.+.....+.. ...+.| ....+.+.+.|+.+++|+.+
T Consensus 333 ~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 333 HYKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred CCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCCc
Confidence 5444 3455555 579999999999999999999887655443322 123333 33445678889999999764
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.2e-31 Score=244.43 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=197.8
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC-------ceeeeccCccCCeEEEEECCCC-cEEEEeeCCC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDANA-LFSASGSADF 83 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~-------~~~~~l~gH~~~V~~v~~~~~~-~~l~s~s~Dg 83 (350)
+.||.++|.+++|+|. ++.+|++|+.|++|+||+..++ +++..+.+|...|.+++|+|++ .++++++.||
T Consensus 77 ~~~h~~~V~~~~~~p~--~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPH--NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp BCCCSSCEEEEEECTT--CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred EecCCCCEEEEEeCCC--CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 5799999999999862 6789999999999999999887 6678899999999999999998 6999999999
Q ss_pred eEEEeeCCCCCeeeee---eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCc-EEEEEEeCCCCc
Q 018784 84 TAKLWDALTGDEKHSF---EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS-IRTVAWLHSDQT 159 (350)
Q Consensus 84 ~v~vWd~~~~~~~~~~---~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~ 159 (350)
+|++||+.+++....+ .|...|.+++|+|++.+|++++.|+.|++||+.++.........|.+. +..+.|++ ++.
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 233 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGK 233 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCc
Confidence 9999999998887776 388999999999999999999999999999998755433332345444 78888886 567
Q ss_pred EEEEE---eCCCeEEEEECCCCce---eEeecCCCCeEEEEEecCCcEEE-EE-cCCcEEEEECCCcce----eeeeecC
Q 018784 160 ILSSC---TDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFGL----VKGYNMP 227 (350)
Q Consensus 160 ~~~s~---~~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~~~~~----~~~~~~~ 227 (350)
++++| +.|+.|++||+++++. ...+.+...+..++|+|++++++ ++ .|+.|++||+.+... +..+...
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~ 313 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK 313 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccC
Confidence 78887 7899999999998754 33345667899999999998875 45 489999999988763 2333323
Q ss_pred CCCceeEecCCCCcEEEEecCCCeEEEEEcccCee
Q 018784 228 CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~ 262 (350)
.....+.+.+. +.++++ .++.+++|++.++..
T Consensus 314 ~~v~~~~~sp~-~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 314 ESQRGMGYMPK-RGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SCCSEEEECCG-GGSCGG--GTEEEEEEEEETTEE
T ss_pred CcccceEEecc-ccccee--cceeEEEEEcCCCcE
Confidence 44556667663 555553 466999999987654
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-31 Score=248.43 Aligned_cols=246 Identities=13% Similarity=0.108 Sum_probs=184.7
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccC--ccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~g--H~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
+.||.++|++|+|+| .++.+|+|||.|++|+|||++++........ +...+.+++|++++.++++|+.||+|++||
T Consensus 160 ~~gH~~~V~~l~f~p--~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 160 GIGAGGSITGLKFNP--LNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp CCSSSCCCCEEEECS--SCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred ccCCCCCEEEEEEeC--CCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 469999999999997 3678999999999999999987655443333 344578899999999999999999999999
Q ss_pred CCCCCeeeeeeccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCe--eecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 90 ALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPR--EVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 90 ~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
+..........|...|.+++|+|++. +|++|+.|++|++||+........ ....|...|.+++|++ ++.++++++.
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~ 316 (435)
T 4e54_B 238 MDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQ 316 (435)
T ss_dssp SSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEES
T ss_pred cCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcC
Confidence 86543333346899999999999876 678999999999999976544322 2346788999999986 5667889999
Q ss_pred CCeEEEEECCCCceeEeecCCC-------CeEEEEEecCCcEEEEE-------------cCCcEEEEECCCcceeeeeec
Q 018784 167 SGGVRLWDARSGKIVQTLETKS-------PVTSAEVSRDGRYITTA-------------DGSSVKFWDANHFGLVKGYNM 226 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~-------------~~~~i~vwd~~~~~~~~~~~~ 226 (350)
|++|++||+++++....+..+. .+....++|++.+++++ .++.|++||..++..+..+..
T Consensus 317 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~ 396 (435)
T 4e54_B 317 KSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD 396 (435)
T ss_dssp SSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC
T ss_pred CCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC
Confidence 9999999999988766654321 23345667766655443 235799999999887766543
Q ss_pred CCC--Ccee-EecCCCCcEEEEecCCCeEEEEEcccCee
Q 018784 227 PCN--TESA-SLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 227 ~~~--~~~~-~~~~~~~~~l~sg~~d~~i~v~d~~~~~~ 262 (350)
+.. ...+ .++| ++.+|++|+ |+.|+|||+.+++.
T Consensus 397 ~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 397 PESSGISSLNEFNP-MGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SSCCCCCCEEEECT-TSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEECCcCee
Confidence 322 2333 3444 688888876 88999999988765
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-31 Score=246.80 Aligned_cols=257 Identities=11% Similarity=0.107 Sum_probs=191.1
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
.||...|++|+|+| +| .++++.+|+.+..+ +.++ +|...|.+++|+|+|.++|+++.||+|++||...
T Consensus 49 ~gh~~~v~~V~FsP---dg-------~~~~~~~~~~~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~ 116 (588)
T 2j04_A 49 NCNSKNLFHVKEFP---LE-------FENKLDFELAQQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK 116 (588)
T ss_dssp SSBGGGTEEEEEEC---CC-------CCCTTTTSCCCSSC-SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE
T ss_pred cCCCccEEEEEECC---CC-------CcceEEEEeCCCce-Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Confidence 69999999999997 77 56666666643222 2233 5688999999999999999999999999999644
Q ss_pred CCeeeeeeccc-----cEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCC--C----Ceee----cCCCCcEEEEEEeCCC
Q 018784 93 GDEKHSFEHKH-----IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA--P----PREV----GNSSGSIRTVAWLHSD 157 (350)
Q Consensus 93 ~~~~~~~~h~~-----~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~--~----~~~~----~~~~~~v~~~~~~~~~ 157 (350)
....+.|.. .|.+++|+|+|++|++|+.||+|++||+..+.. + .... ..|...|.+++|+|++
T Consensus 117 --~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 117 --MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp --EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred --eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 444445444 499999999999999999999999999986542 1 1222 5577899999999754
Q ss_pred CcEEEEEeCCCeEEEEECCCCce---eEeec--CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCccee-eeeecCCCCc
Q 018784 158 QTILSSCTDSGGVRLWDARSGKI---VQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV-KGYNMPCNTE 231 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~-~~~~~~~~~~ 231 (350)
+++++.|++|++||+.+++. ..++. +...|.+++|+ +..++++.++.|++||+.+.... ..+.......
T Consensus 195 ---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~ 269 (588)
T 2j04_A 195 ---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFH 269 (588)
T ss_dssp ---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred ---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEE
Confidence 66778899999999988773 34553 34689999999 57777777899999999887663 3222222334
Q ss_pred eeEe-cCCCCcEEEEecCCCeEEEEEcccCe-----------------------eEEeecCCCcCEEEEEEcCCCCEEEE
Q 018784 232 SASL-EPKLGNIFIAGGEDMWVHVFDFHTGE-----------------------QIGCNKGHHGPVHCVRFSPGGESYAS 287 (350)
Q Consensus 232 ~~~~-~~~~~~~l~sg~~d~~i~v~d~~~~~-----------------------~~~~~~~h~~~v~~l~~sp~~~~las 287 (350)
.+.+ ..+++..+++++.||+ ++|....-. .+..+. +...|++++|||||+.+|+
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEE
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEE
Confidence 4555 1345789999999999 999863111 011111 2345999999999999998
Q ss_pred ecC
Q 018784 288 GSE 290 (350)
Q Consensus 288 gs~ 290 (350)
++.
T Consensus 348 ~~~ 350 (588)
T 2j04_A 348 VYD 350 (588)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.9e-29 Score=232.08 Aligned_cols=285 Identities=13% Similarity=0.130 Sum_probs=220.4
Q ss_pred eCCCCeeEeeC--CCC--ceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee------eccccEeE
Q 018784 38 SKDSSPMLRNG--ETG--DWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF------EHKHIVRA 107 (350)
Q Consensus 38 s~d~~v~iw~~--~~~--~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~------~h~~~V~~ 107 (350)
+.|+.++||.. .++ +.+..+..|. .+.+++|++++.++++++.|+.|++||+.+++..... .|...|.+
T Consensus 96 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 96 PEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp GGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred cCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 34444455554 334 5566666554 4558899998889999999999999999988876532 36778999
Q ss_pred EEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC
Q 018784 108 CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK 187 (350)
Q Consensus 108 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~ 187 (350)
++|+|++.++++++.|+.|++||+.+.... .....+...+.+++|.+.+..++++++.|++|++||+++++.+..+...
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYK-ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEE-EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEE-EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 999999999999999999999999765433 3334567789999999877777788888999999999999998888888
Q ss_pred CCeEEEEEecCCcEEEEEc---------CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 188 SPVTSAEVSRDGRYITTAD---------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~---------~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
..+..++++|++++++++. ++.|++||+++.+.+.....+.....+.+.+....++++++.|+.|++||+.
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 8899999999998776543 6789999999887766654444455566766544677888999999999999
Q ss_pred cCeeEEeecCCCcCEEEEEEcCCCCEEEEecC---------------CCcEEEecCCCCCcccCCCCCCCcccccccccc
Q 018784 259 TGEQIGCNKGHHGPVHCVRFSPGGESYASGSE---------------DGTIRIWQTNPPNHEENHSGTGNAQTGKLKAST 323 (350)
Q Consensus 259 ~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~---------------Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (350)
+++.+..+. +...+.+++|+|++++|++++. ||.|++||+...+.....
T Consensus 334 ~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~--------------- 397 (433)
T 3bws_A 334 EKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW--------------- 397 (433)
T ss_dssp TTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE---------------
T ss_pred CCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe---------------
Confidence 988877665 6778999999999998887776 579999998654332211
Q ss_pred ccceeeeeeEEEcccchh
Q 018784 324 DEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 324 ~~~~~~i~~~~~~~~g~~ 341 (350)
.. ...+.++.++|||+.
T Consensus 398 ~~-~~~~~~~~~s~dg~~ 414 (433)
T 3bws_A 398 EA-GNQPTGLDVSPDNRY 414 (433)
T ss_dssp EC-SSSEEEEEECTTSCE
T ss_pred cC-CCCCceEEEcCCCCE
Confidence 11 224677788888753
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=8.3e-30 Score=242.51 Aligned_cols=306 Identities=12% Similarity=0.155 Sum_probs=236.6
Q ss_pred CCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC--CCCCeeeeeeccccEe
Q 018784 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA--LTGDEKHSFEHKHIVR 106 (350)
Q Consensus 29 ~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~--~~~~~~~~~~h~~~V~ 106 (350)
|++.++++++.|++|.+||..+++++.++..+.. +..++++|+++++++++.|++|++||+ .+++.+..+.+...++
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc
Confidence 4899999999999999999999999999984333 889999999999999999999999999 7888888888777899
Q ss_pred EEEEcC----CCCeEEEeeC-CCeEEEEECCCCCCCCeeec----------CCCCcEEEEEEeCCCCcEEEEEeCCCeEE
Q 018784 107 ACAFSE----DTHLLLTGGF-EKILRIFDLNRPDAPPREVG----------NSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (350)
Q Consensus 107 ~~~~~~----~~~~l~sg~~-d~~v~vwd~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~s~~~dg~i~ 171 (350)
.++|+| ++++|++++. +++|.+||..+.+....... +....+..+.+++.+..++++..++++|.
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~ 305 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 305 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEE
Confidence 999999 9999999884 89999999876543322211 12336888999988888999999999999
Q ss_pred EEECCCCceeE--eecCCCCeEEEEEecCCcEEEE-E-cCCcEEEEECCCcceeeeeecCCCC---ceeE-ecCCCCcEE
Q 018784 172 LWDARSGKIVQ--TLETKSPVTSAEVSRDGRYITT-A-DGSSVKFWDANHFGLVKGYNMPCNT---ESAS-LEPKLGNIF 243 (350)
Q Consensus 172 iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~-~-~~~~i~vwd~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~l 243 (350)
+||+.+.+.+. .+.....+..+.|+|+++++.+ + .++.|.+||+.+++++..+.....+ .... +.+..+.++
T Consensus 306 vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~ 385 (543)
T 1nir_A 306 LVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW 385 (543)
T ss_dssp EEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEE
T ss_pred EEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEE
Confidence 99998876544 5555556778999999997654 3 3679999999999888776642111 1222 345557788
Q ss_pred EEec-CCCeEEEEEccc-------CeeEEeecCCCcCEEEEEEcCCCCEEEEec-------CCCcEEEecCCCCCcccCC
Q 018784 244 IAGG-EDMWVHVFDFHT-------GEQIGCNKGHHGPVHCVRFSPGGESYASGS-------EDGTIRIWQTNPPNHEENH 308 (350)
Q Consensus 244 ~sg~-~d~~i~v~d~~~-------~~~~~~~~~h~~~v~~l~~sp~~~~lasgs-------~Dg~v~vw~~~~~~~~~~~ 308 (350)
+++. .|++|.+||+.+ ++.+.++.+|...+..++|+|++++|++++ .+++|.|||+.+.+.....
T Consensus 386 ~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~ 465 (543)
T 1nir_A 386 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 465 (543)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred EeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEE
Confidence 8876 689999999998 889999999999999999999999999987 3789999999765532000
Q ss_pred CCCCCccccccccccccceeeeeeEEEcccchh
Q 018784 309 SGTGNAQTGKLKASTDEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~ 341 (350)
.. .+.. ....+....+..+.++|||+.
T Consensus 466 ~~-----v~~~-~~~~~~~~~~~~~~~~~~g~~ 492 (543)
T 1nir_A 466 LP-----IAEW-ADLGEGAKRVVQPEYNKRGDE 492 (543)
T ss_dssp EC-----HHHH-HCCCSSCCEEEEEEECSSSSE
T ss_pred ee-----chhh-cccCCCCCceEeccCCCCCCE
Confidence 00 0000 001233556777788888863
No 117
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.3e-30 Score=234.37 Aligned_cols=224 Identities=19% Similarity=0.229 Sum_probs=175.2
Q ss_pred CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC--CCCeeeee-eccccEeEEEEcCC--CCeEEEeeCCCe
Q 018784 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TGDEKHSF-EHKHIVRACAFSED--THLLLTGGFEKI 125 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~--~~~~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~ 125 (350)
|+++..+.+|.+.|.+++|++++.+|++|+.||.|++||+. +......+ .|...|.+++|+|+ +.+|++++.|+.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 45677899999999999999999999999999999999997 33444444 58999999999977 999999999999
Q ss_pred EEEEECCCCCC-CCeeecCCCCcEEEEEEeCCC-CcEEEEEeCCCeEEEEECCCCce--eEee-cCCCCeEEEEEecCCc
Q 018784 126 LRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSD-QTILSSCTDSGGVRLWDARSGKI--VQTL-ETKSPVTSAEVSRDGR 200 (350)
Q Consensus 126 v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~ 200 (350)
|++||+.++.. .......|...+.+++|.+.. +.++++++.|++|++||++++.. ...+ .+...+.+++|+|...
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 99999986541 233445678899999998753 67888899999999999988732 2222 3456788888888542
Q ss_pred EEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe----eEEeecCCCcCEEEE
Q 018784 201 YITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE----QIGCNKGHHGPVHCV 276 (350)
Q Consensus 201 ~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~----~~~~~~~h~~~v~~l 276 (350)
...... ....++.++++|+.|+.|++||++++. ....+.+|...|.++
T Consensus 161 ~~~~~~----------------------------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 161 EEDGEH----------------------------NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp -------------------------------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cccccc----------------------------cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 211100 002357889999999999999998764 445678999999999
Q ss_pred EEcCC---CCEEEEecCCCcEEEecCCCC
Q 018784 277 RFSPG---GESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 277 ~~sp~---~~~lasgs~Dg~v~vw~~~~~ 302 (350)
+|+|+ +.+|++++.||.|++||+...
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 99999 899999999999999998764
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.3e-30 Score=236.53 Aligned_cols=241 Identities=11% Similarity=0.087 Sum_probs=180.5
Q ss_pred EeeccCCceeEEEecccCCCccEEEEE-----------eCCCCeeEeeCCCCce----eee-----ccCccCCeEEEEEC
Q 018784 11 VCHGHSRPVVDLFYSPITPDGFFLVSA-----------SKDSSPMLRNGETGDW----IGT-----FEGHKGAVWSCCLD 70 (350)
Q Consensus 11 ~~~gH~~~v~~~~~~~~s~dg~~lasg-----------s~d~~v~iw~~~~~~~----~~~-----l~gH~~~V~~v~~~ 70 (350)
.+.+|.+.|.+++|+ +..+++| +.|+++|+|+..+... ... ...+...+++++|+
T Consensus 68 ~l~~~~~~v~s~~~~-----~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fS 142 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS-----KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYIS 142 (365)
T ss_dssp ECCTTSCCCCEEEEE-----TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEEC
T ss_pred EccCCCCceEEEEeC-----CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEc
Confidence 357899999988775 3355554 5678889998755422 111 12355668999999
Q ss_pred CCCcEEE--EeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCC-eeecCCCCc
Q 018784 71 ANALFSA--SGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP-REVGNSSGS 147 (350)
Q Consensus 71 ~~~~~l~--s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~-~~~~~~~~~ 147 (350)
|||++++ |++.|++|||||+.+++.+..+.|...|.+++|+|++++|++++.++ +++|+..++.... .....|...
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCC
Confidence 9999865 55689999999999999999999999999999999999999998665 4555554443322 233457778
Q ss_pred EEEEEEeCCCCcEEEEEeCCC----eEEEEECCCCcee----Eeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCC
Q 018784 148 IRTVAWLHSDQTILSSCTDSG----GVRLWDARSGKIV----QTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANH 217 (350)
Q Consensus 148 v~~~~~~~~~~~~~~s~~~dg----~i~iwd~~~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~ 217 (350)
+.+++|+++ +..+++++.|+ ++++||+...... ..+. +..+|++++|+|+|++|+++ .|+.|++||+++
T Consensus 222 v~~v~fspd-g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 222 LSKINFIAD-DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEET-TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCC-CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 999999875 45566666665 6889998776432 2233 45689999999999998765 589999999999
Q ss_pred cceeeee-ecCCC-CceeEecCCCCcEEEEecCCCeEEEEEccc
Q 018784 218 FGLVKGY-NMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (350)
Q Consensus 218 ~~~~~~~-~~~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~ 259 (350)
+++++.+ ..+.. ...+.|.| ++++|++|+.|++|+|||+..
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 9888765 34443 34566665 689999999999999999853
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=4.6e-30 Score=232.03 Aligned_cols=247 Identities=12% Similarity=0.090 Sum_probs=176.7
Q ss_pred EeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeE-EEeeCC
Q 018784 45 LRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFE 123 (350)
Q Consensus 45 iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sg~~d 123 (350)
||+..+.+++.++.+|.+.|++++|++++.+|++|+.|+ +++|+..++.......+. .+..+++.++++.+ ++++.|
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSST
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCc
Confidence 566667777778899999999999999999999988775 789998876655544433 47888899888877 568888
Q ss_pred CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCC-ceeEeecCCCCeEEEEEecCCcEE
Q 018784 124 KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSG-KIVQTLETKSPVTSAEVSRDGRYI 202 (350)
Q Consensus 124 ~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l 202 (350)
++|++||+.+++..... .+...+.++.+.+. . ++.+. |++|++||++++ +.+..+.. +...+++++ ..++
T Consensus 81 ~~v~iWd~~~~~~~~~~--~~~~~v~~v~~~~~--~-~~~~~-~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~-~~la 151 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRI--KVDAPVKDLFLSRE--F-IVVSY-GDVISVFKFGNPWKRITDDIR--FGGVCEFSN-GLLV 151 (355)
T ss_dssp TEEEEEETTTTEEEEEE--ECSSCEEEEEECSS--E-EEEEE-TTEEEEEESSTTCCBSSCCEE--EEEEEEEET-TEEE
T ss_pred cEEEEEECCCCcEEEEE--ECCCceEEEEEcCC--E-EEEEE-cCEEEEEECCCCceeeEEecc--CCceEEEEc-cEEE
Confidence 99999999866543322 35668999988642 2 33333 679999999988 66666555 444566777 3333
Q ss_pred EE--EcCCcEEEEECCCcc----------------eeeeeecCCCC-ceeEecCCCCcEEEEecCCCe-EEEEEcccCee
Q 018784 203 TT--ADGSSVKFWDANHFG----------------LVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMW-VHVFDFHTGEQ 262 (350)
Q Consensus 203 ~~--~~~~~i~vwd~~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~~l~sg~~d~~-i~v~d~~~~~~ 262 (350)
++ +.++.|++||+++.. .+..+..+... ..+.+.+ ++++|++|+.|++ |++||+.+++.
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcE
Confidence 33 357899999998754 13444444333 4455665 6899999999998 99999999999
Q ss_pred EEeec-C-CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 263 IGCNK-G-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 263 ~~~~~-~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+..+. + |...|++++|+|++++|++|+.|++|++||+....
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 99987 6 99999999999999999999999999999997653
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=9e-30 Score=236.21 Aligned_cols=251 Identities=18% Similarity=0.295 Sum_probs=188.1
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
..+.+|.++|.+++| ++.+|++|+.|++|++||..+++.+..+.+|...|.+++++ +.++++|+.||+|++||
T Consensus 167 ~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 167 RILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp EEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEE
T ss_pred EEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEe
Confidence 345799999999987 56799999999999999999999999999999999999996 45999999999999999
Q ss_pred CCCCCee---e-eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 90 ALTGDEK---H-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 90 ~~~~~~~---~-~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
+.++... . ...|...|.+++| ++++|++|+.|+.|++||+.++.. ......|...+.++.+. +.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~---~~~l~~g~ 313 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF-VRTLNGHKRGIACLQYR---DRLVVSGS 313 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEE---TTEEEEEE
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE-EEEEcCCCCcEEEEEeC---CCEEEEEe
Confidence 9877654 2 2358889999999 788999999999999999987543 34446678889999883 46888999
Q ss_pred CCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcEEE-EEcCCcEEEEECCCcc---------eeeeeecCCC-Ccee
Q 018784 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFG---------LVKGYNMPCN-TESA 233 (350)
Q Consensus 166 ~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~-~~~~~~i~vwd~~~~~---------~~~~~~~~~~-~~~~ 233 (350)
.||+|++||+++++++..+.. ...+.++.+ ++.+++ ++.|+.|++||+++.. ++..+..+.. ...+
T Consensus 314 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 314 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred CCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEE
Confidence 999999999999999988875 467888888 555555 5568999999987654 4544443332 2333
Q ss_pred EecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEc
Q 018784 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFS 279 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s 279 (350)
.+ ++.+|++|+.|+.|++||+.+........ ...+..++.|.
T Consensus 392 ~~---~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 392 QF---DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp EE---CSSCEEECCSSSEEEEEC-----------------------
T ss_pred Ee---CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 44 57889999999999999998765443222 22334444443
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-29 Score=232.40 Aligned_cols=240 Identities=11% Similarity=0.091 Sum_probs=195.1
Q ss_pred eccCCceeEEEecccCCCccEE-EEEeCCCCeeEeeCC--CCceeeecc--CccCCeEEEEECCCCcEEEEeeCCCeEEE
Q 018784 13 HGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGE--TGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKL 87 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~l-asgs~d~~v~iw~~~--~~~~~~~l~--gH~~~V~~v~~~~~~~~l~s~s~Dg~v~v 87 (350)
.+|.++|++++|+| +|++| ++|+.|++|+||+.. +++.+..+. +|...|.+++|+|++.++++++.||.|++
T Consensus 99 ~~~~~~v~~~~~s~---d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS---DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECT---TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcC---CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 47888999999987 89886 999999999999998 888888887 56789999999999999999999999999
Q ss_pred eeCCCCCeee----e-eeccccEeEEEEcCC---CCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCc
Q 018784 88 WDALTGDEKH----S-FEHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (350)
Q Consensus 88 Wd~~~~~~~~----~-~~h~~~V~~~~~~~~---~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (350)
|++.++.... . ..|...|.+++|+|+ +++|++|+.|++|++||+.++.........|...|.+++|+ ++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~ 253 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDY 253 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STT
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCC
Confidence 9987766442 3 368899999999999 99999999999999999987655444455788999999998 777
Q ss_pred EEEEEeCCCeEEEEECCCCceeEeecC--------------------------CCCeEEEEEecCCcEEEEE--cCCcEE
Q 018784 160 ILSSCTDSGGVRLWDARSGKIVQTLET--------------------------KSPVTSAEVSRDGRYITTA--DGSSVK 211 (350)
Q Consensus 160 ~~~s~~~dg~i~iwd~~~~~~~~~~~~--------------------------~~~v~~~~~~~~~~~l~~~--~~~~i~ 211 (350)
++++++.|++|++||+++++++..+.. ...+..+.++|++++++++ .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 888999999999999999998777652 2468899999999988765 578999
Q ss_pred EEEC--CCc---ceeeeeecCCCCceeEecCCCCcEEEEecC-------CCeEEEEEccc
Q 018784 212 FWDA--NHF---GLVKGYNMPCNTESASLEPKLGNIFIAGGE-------DMWVHVFDFHT 259 (350)
Q Consensus 212 vwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-------d~~i~v~d~~~ 259 (350)
+||+ ... ..+..+..+.....+.+.+ +.++++.+. +..|.+|.+..
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFPYNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECSSCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEeccCCCCceeeccEeccCCceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEc
Confidence 9999 444 5566666665555666766 345555433 45588887653
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=9e-30 Score=227.11 Aligned_cols=260 Identities=15% Similarity=0.193 Sum_probs=186.4
Q ss_pred eeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC----eeeee-eccccEeEEEEcC--CCCeEEEeeCCCeEE
Q 018784 55 GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD----EKHSF-EHKHIVRACAFSE--DTHLLLTGGFEKILR 127 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~----~~~~~-~h~~~V~~~~~~~--~~~~l~sg~~d~~v~ 127 (350)
..+.+|.+.|.+++|++++.+|++++.||.|++||+.++. ....+ .|...|.+++|+| ++.+|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 3568999999999999999999999999999999998764 22333 5889999999999 699999999999999
Q ss_pred EEECCCCCCC--------CeeecCCCCcEEEEEEeCCC-CcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecC
Q 018784 128 IFDLNRPDAP--------PREVGNSSGSIRTVAWLHSD-QTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRD 198 (350)
Q Consensus 128 vwd~~~~~~~--------~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 198 (350)
+||+..+... ......|...+.+++|.+.. +.++++++.|++|++||+++++.+..+.....+..+.+.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999765321 23445788899999998653 67888899999999999998876543322111111111110
Q ss_pred CcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCC--CCcEEEEecCCCeEEEEEcccCee--EEeecCCCcCEE
Q 018784 199 GRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPK--LGNIFIAGGEDMWVHVFDFHTGEQ--IGCNKGHHGPVH 274 (350)
Q Consensus 199 ~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~d~~i~v~d~~~~~~--~~~~~~h~~~v~ 274 (350)
+ .......+.+.+. .+.++++++.|+.+.+|+...+.. +..+.+|...|+
T Consensus 165 ~--------------------------~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 218 (351)
T 3f3f_A 165 N--------------------------HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIR 218 (351)
T ss_dssp S--------------------------CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEE
T ss_pred C--------------------------cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCccee
Confidence 0 0011223333332 367889999999998888777654 667789999999
Q ss_pred EEEEcCCC----CEEEEecCCCcEEEecCCCCCcccCCCCC-------------------------------CCcccccc
Q 018784 275 CVRFSPGG----ESYASGSEDGTIRIWQTNPPNHEENHSGT-------------------------------GNAQTGKL 319 (350)
Q Consensus 275 ~l~~sp~~----~~lasgs~Dg~v~vw~~~~~~~~~~~~~~-------------------------------~~~~~~~~ 319 (350)
+++|+|++ .+|++|+.||.|++||+............ ........
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred EEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 99999998 89999999999999998754322111000 01111233
Q ss_pred ccccccceeeeeeEEEcccch
Q 018784 320 KASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~~g~ 340 (350)
......+...|.++.++|+|+
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~ 319 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGT 319 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSC
T ss_pred EEEEecccccEEEEEEcCCCC
Confidence 444455777899999999886
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.8e-30 Score=235.09 Aligned_cols=289 Identities=12% Similarity=0.037 Sum_probs=171.1
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC----------ceeee-------------------ccCccCCeEEEE
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----------DWIGT-------------------FEGHKGAVWSCC 68 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~----------~~~~~-------------------l~gH~~~V~~v~ 68 (350)
..+.+.+...+|++..++.++.|+.|++|+.... ..+.. ...|...+....
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNS 96 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceee
Confidence 4556666555555544444556788999874211 00111 112223333334
Q ss_pred ECCCCcEEEEeeCCCeEEEeeCCCCCeeee-----e-eccccEeEEEEcC--------CCCeEEEeeCCCeEEEEECCCC
Q 018784 69 LDANALFSASGSADFTAKLWDALTGDEKHS-----F-EHKHIVRACAFSE--------DTHLLLTGGFEKILRIFDLNRP 134 (350)
Q Consensus 69 ~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~-----~-~h~~~V~~~~~~~--------~~~~l~sg~~d~~v~vwd~~~~ 134 (350)
+++++.++++++.|++||+||..++..... + .|.+.|++++|+| ++++|++|+.|++|+|||+.+.
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 455667899999999999999987764332 1 4999999999997 7899999999999999999754
Q ss_pred CCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCC-----CeEEEEEecCCcEEEEEcCCc
Q 018784 135 DAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKS-----PVTSAEVSRDGRYITTADGSS 209 (350)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~ 209 (350)
... .....|...+.+++|.|.+..++++++.|++|++||+++++......... .+......+.......
T Consensus 177 ~~~-~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~----- 250 (393)
T 4gq1_A 177 GPI-LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS----- 250 (393)
T ss_dssp EEE-EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----------
T ss_pred cee-eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec-----
Confidence 433 33445677899999998887889999999999999999887654443211 1111111111100000
Q ss_pred EEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC---------
Q 018784 210 VKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP--------- 280 (350)
Q Consensus 210 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp--------- 280 (350)
.........+.+.+.+++.+++++.|+.+++||+..+.....+..|...+..+.+.|
T Consensus 251 --------------~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 251 --------------SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp ---------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred --------------ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 000112334455556788999999999999999988777666666665555544433
Q ss_pred -----------CCCEEEEecCCCcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccchh
Q 018784 281 -----------GGESYASGSEDGTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGKA 341 (350)
Q Consensus 281 -----------~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~ 341 (350)
++.++++|+.||.|+|||+...... .....+...|..+.++|||+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~---------------~~~~~~~~~V~svafspdG~~ 373 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN---------------SIPIQLGMPIVDFCWHQDGSH 373 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC---------------EEEEECSSCEEEEEECTTSSE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE---------------EEecCCCCcEEEEEEcCCCCE
Confidence 3446789999999999998654322 112234456889999999975
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-30 Score=230.73 Aligned_cols=228 Identities=7% Similarity=0.029 Sum_probs=176.0
Q ss_pred ECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC---------CCCCCe
Q 018784 69 LDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR---------PDAPPR 139 (350)
Q Consensus 69 ~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~---------~~~~~~ 139 (350)
+.+++.++++|+.||+|++||+.+++....+. ...|.++.|+|+ +++++.|++|++|+... ......
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 44678899999999999999999988777765 466888889988 99999999999998752 111112
Q ss_pred eecCCCCcEEEEEEeCC-CCcEEEEEeCCCeEEEEECCCCceeEeec--CCCCeEEEEEecCCcEEEEE-cCCcEEEEEC
Q 018784 140 EVGNSSGSIRTVAWLHS-DQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTA-DGSSVKFWDA 215 (350)
Q Consensus 140 ~~~~~~~~v~~~~~~~~-~~~~~~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~ 215 (350)
....|.+.|.+++|.+. ++.++++++.|++|++||+++++.+.... ....+.+++|+|++.+++++ .|+.|++||+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 22355678999998761 56788899999999999999998866553 34579999999999999874 6899999999
Q ss_pred CCccee-eeeec-CCC-CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC---CCcCEE--EEEEcCCCCEEEE
Q 018784 216 NHFGLV-KGYNM-PCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG---HHGPVH--CVRFSPGGESYAS 287 (350)
Q Consensus 216 ~~~~~~-~~~~~-~~~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~---h~~~v~--~l~~sp~~~~las 287 (350)
++...+ ..+.. +.. ...+.+.+ ++.+|++++ |+.|++||+++++.+..+.. |...+. +++|+|++++|++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 998776 55555 333 34555655 588999999 45999999999877655443 444444 6999999999999
Q ss_pred ecC-CCcEEEecCCCC
Q 018784 288 GSE-DGTIRIWQTNPP 302 (350)
Q Consensus 288 gs~-Dg~v~vw~~~~~ 302 (350)
++. |+.|++|++...
T Consensus 278 ~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKK 293 (343)
T ss_dssp EETTTTEEEEEEECTT
T ss_pred ecCCCCcEEEEEEccc
Confidence 998 999999998544
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=4.7e-28 Score=223.38 Aligned_cols=268 Identities=16% Similarity=0.112 Sum_probs=200.6
Q ss_pred cCCCc-cEEEEEe----CCC----CeeEeeC--CCCcee--eeccCccCCeEEEEECC--------------CCcEEEEe
Q 018784 27 ITPDG-FFLVSAS----KDS----SPMLRNG--ETGDWI--GTFEGHKGAVWSCCLDA--------------NALFSASG 79 (350)
Q Consensus 27 ~s~dg-~~lasgs----~d~----~v~iw~~--~~~~~~--~~l~gH~~~V~~v~~~~--------------~~~~l~s~ 79 (350)
+.+.| .++++|+ .|| +++|||+ .+++.+ ..+.+|...++.+++++ .+..++.+
T Consensus 70 w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~ 149 (415)
T 2hqs_A 70 WSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 149 (415)
T ss_dssp HHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEE
T ss_pred HHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEE
Confidence 33455 4777887 567 8999999 999887 56899998887776653 14445544
Q ss_pred eCC------CeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCC---eEEEEECCCCCCCCeeecCCCCcEEE
Q 018784 80 SAD------FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK---ILRIFDLNRPDAPPREVGNSSGSIRT 150 (350)
Q Consensus 80 s~D------g~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~---~v~vwd~~~~~~~~~~~~~~~~~v~~ 150 (350)
+.+ +.|++||...........|...|.+++|+|+|+.|++++.++ .|++||+.+++. .....+.+.+.+
T Consensus 150 s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~ 227 (415)
T 2hqs_A 150 VQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGA 227 (415)
T ss_dssp EECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEE
T ss_pred EecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccC
Confidence 443 799999998665555567889999999999999999999875 999999986543 344556778999
Q ss_pred EEEeCCCCcEEEEEeCCCe--EEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc--CC--cEEEEECCCcceeeee
Q 018784 151 VAWLHSDQTILSSCTDSGG--VRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD--GS--SVKFWDANHFGLVKGY 224 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~--i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~vwd~~~~~~~~~~ 224 (350)
++|+|++..++++++.|+. |++||+++++......+...+..+.|+|+|++|+.+. ++ .|.+||+.+..... +
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l 306 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-I 306 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-C
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-E
Confidence 9999877767768776654 9999999888754444556789999999999776543 33 68888988765432 2
Q ss_pred ecCC-CCceeEecCCCCcEEEEecCC---CeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCC---cEEEe
Q 018784 225 NMPC-NTESASLEPKLGNIFIAGGED---MWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDG---TIRIW 297 (350)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~~l~sg~~d---~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg---~v~vw 297 (350)
.... ......+.+ ++++|++++.+ ..|++||+.+++.. .+..|. .+.+++|+|+|++|++++.|+ .|++|
T Consensus 307 ~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~ 383 (415)
T 2hqs_A 307 TWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLV 383 (415)
T ss_dssp CCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred ecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEE
Confidence 2222 223445555 57777777654 58999999988764 455554 899999999999999888877 79999
Q ss_pred cCC
Q 018784 298 QTN 300 (350)
Q Consensus 298 ~~~ 300 (350)
|+.
T Consensus 384 d~~ 386 (415)
T 2hqs_A 384 STD 386 (415)
T ss_dssp ETT
T ss_pred ECC
Confidence 975
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.5e-28 Score=213.35 Aligned_cols=174 Identities=11% Similarity=0.008 Sum_probs=133.3
Q ss_pred CCCCeeEeeC-CCCceeeeccCccCCeEEEEECC---CCcEEEEeeCCCeEEEeeCCCCCeeeeee-c---cccEeEEEE
Q 018784 39 KDSSPMLRNG-ETGDWIGTFEGHKGAVWSCCLDA---NALFSASGSADFTAKLWDALTGDEKHSFE-H---KHIVRACAF 110 (350)
Q Consensus 39 ~d~~v~iw~~-~~~~~~~~l~gH~~~V~~v~~~~---~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h---~~~V~~~~~ 110 (350)
.|++|++|++ .+|+.+..+.+|...+..++|++ ++.+++|+|.|++|||||+.+++.+.++. | ...|.+++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 3888888888 45888888888888888888887 67899999999999999999999988885 3 346778899
Q ss_pred cCCCCeE------------EEeeCCCeEEEEECCCCCCCCee----ecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEE
Q 018784 111 SEDTHLL------------LTGGFEKILRIFDLNRPDAPPRE----VGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (350)
Q Consensus 111 ~~~~~~l------------~sg~~d~~v~vwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd 174 (350)
+|++.++ ++|+.|++|++||+.++...... ...|.+.+.+..+. +.++++++.|++|+|||
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEE
Confidence 9999876 56889999999999765432111 12333344444332 56789999999999999
Q ss_pred CCCCceeEeecCC-CC-eEEEEEecCCcEEEEE-cCCcEEEEEC
Q 018784 175 ARSGKIVQTLETK-SP-VTSAEVSRDGRYITTA-DGSSVKFWDA 215 (350)
Q Consensus 175 ~~~~~~~~~~~~~-~~-v~~~~~~~~~~~l~~~-~~~~i~vwd~ 215 (350)
+++++++.++..+ .. +..++|+|+|++|+++ .|++|++||.
T Consensus 312 l~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999854 33 4468999999988765 5899999985
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-28 Score=240.43 Aligned_cols=220 Identities=19% Similarity=0.207 Sum_probs=171.6
Q ss_pred eeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC--CCeeeee-eccccEeEEEEcCC--CCeEEEeeCCCeEEEE
Q 018784 55 GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT--GDEKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIF 129 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~--~~~~~~~-~h~~~V~~~~~~~~--~~~l~sg~~d~~v~vw 129 (350)
..+.+|.+.|++++|++++.++++|+.||+|++||+.. +.....+ .|...|.+++|+|+ +++|++|+.|++|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 46899999999999999999999999999999999873 3444444 58999999999988 9999999999999999
Q ss_pred ECCCCCC-CCeeecCCCCcEEEEEEeCCC-CcEEEEEeCCCeEEEEECCCCce---eEeecCCCCeEEEEEecCCcEEEE
Q 018784 130 DLNRPDA-PPREVGNSSGSIRTVAWLHSD-QTILSSCTDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYITT 204 (350)
Q Consensus 130 d~~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~s~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~ 204 (350)
|+.++.. .......|...|.+++|++.. +.++++|+.||+|++||++++.. .....+...+.++.|+|.......
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 9976531 223445688899999998753 67888999999999999988732 222234567888888875311100
Q ss_pred EcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccC----eeEEeecCCCcCEEEEEEcC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG----EQIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~----~~~~~~~~h~~~v~~l~~sp 280 (350)
. .....++.++++|+.|+.|++||++++ .....+.+|..+|++++|+|
T Consensus 163 ~----------------------------~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 163 E----------------------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp --------------------------------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred c----------------------------cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc
Confidence 0 000124678999999999999999876 45567789999999999999
Q ss_pred C---CCEEEEecCCCcEEEecCCCC
Q 018784 281 G---GESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 281 ~---~~~lasgs~Dg~v~vw~~~~~ 302 (350)
+ +.+|++|+.||.|++||+...
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCCCCEEEEEecCCEEEEecCCCC
Confidence 9 899999999999999998764
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=3.4e-26 Score=217.67 Aligned_cols=281 Identities=11% Similarity=0.082 Sum_probs=217.0
Q ss_pred eeEEEecccCCCccEEEEEeCCCCeeEeeC--CCCceeeeccCccCCeEEEEECC----CCcEEEEee-CCCeEEEeeCC
Q 018784 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDA----NALFSASGS-ADFTAKLWDAL 91 (350)
Q Consensus 19 v~~~~~~~~s~dg~~lasgs~d~~v~iw~~--~~~~~~~~l~gH~~~V~~v~~~~----~~~~l~s~s-~Dg~v~vWd~~ 91 (350)
+..++|+| ||++|++++.|++|++||+ .+++++.++.. ...++.++|+| +++++++++ .+++|.+||..
T Consensus 181 ~~~v~~sp---dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 181 VHISRMSA---SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEEECT---TSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred cceEEECC---CCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 78888886 9999999999999999999 88999888884 45578999999 999998887 58999999999
Q ss_pred CCCeeeeee-----------ccc-cEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCC
Q 018784 92 TGDEKHSFE-----------HKH-IVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (350)
Q Consensus 92 ~~~~~~~~~-----------h~~-~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (350)
+++.+..+. |.. .+.++.++|++. ++++...++.|.+||+.+..........+...+..++|+++++
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 988777664 222 688999999765 4567778999999999765433211223455677888988777
Q ss_pred cEEEEEeCCCeEEEEECCCCceeEeecC----C-CCeEEEEEecC-CcEEEEEc--CCcEEEEECCC-------cceeee
Q 018784 159 TILSSCTDSGGVRLWDARSGKIVQTLET----K-SPVTSAEVSRD-GRYITTAD--GSSVKFWDANH-------FGLVKG 223 (350)
Q Consensus 159 ~~~~s~~~dg~i~iwd~~~~~~~~~~~~----~-~~v~~~~~~~~-~~~l~~~~--~~~i~vwd~~~-------~~~~~~ 223 (350)
.+++++..+++|.+||+.+++++..+.. + .....+ ++|+ +.+++++. +++|.+||+.+ +++++.
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 7777887889999999999998887763 1 122222 4677 56666653 68999999988 788888
Q ss_pred eecCCCC-ceeEecCCCCcEEEEec-------CCCeEEEEEcccCeeE-Eee--------cCCCcCEEEEEEcCCCCEEE
Q 018784 224 YNMPCNT-ESASLEPKLGNIFIAGG-------EDMWVHVFDFHTGEQI-GCN--------KGHHGPVHCVRFSPGGESYA 286 (350)
Q Consensus 224 ~~~~~~~-~~~~~~~~~~~~l~sg~-------~d~~i~v~d~~~~~~~-~~~--------~~h~~~v~~l~~sp~~~~la 286 (350)
+..+... ..+.++| +++.|.+++ .+++|.+||+.+++.. ..+ ..+...+..+.|+|+|+.++
T Consensus 416 l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 416 LQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp EECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred EEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 8776543 4555665 578888876 2679999999988766 332 35677899999999999887
Q ss_pred Ee-----cCCCcEEEecCCCCCcc
Q 018784 287 SG-----SEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 287 sg-----s~Dg~v~vw~~~~~~~~ 305 (350)
.+ +.|+.|.|||..+.+..
T Consensus 495 ~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 495 FSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp EEEECCTTSCCEEEEEETTTTEEE
T ss_pred EEeecCCCCCCeEEEEECCCceEE
Confidence 54 35899999998776544
No 129
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=7.5e-27 Score=216.33 Aligned_cols=209 Identities=19% Similarity=0.308 Sum_probs=174.5
Q ss_pred cceeEeeccCCceeEEEecccCCCcc-EEEEEeCCCCeeEeeCCCCce-------eeeccCccCCeEEEEECC-CCcEEE
Q 018784 7 AVPLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDW-------IGTFEGHKGAVWSCCLDA-NALFSA 77 (350)
Q Consensus 7 ~~~~~~~gH~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~~~~~~-------~~~l~gH~~~V~~v~~~~-~~~~l~ 77 (350)
.....+.+|..+|.+++|+| ++. +|++|+.|++|++|++.++.. ...+.+|...|.+++|+| ++.+++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 248 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNP---NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG 248 (430)
T ss_dssp CCSEEEECCSSCCCCEEECT---TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEE
T ss_pred CCcEEecCCCCCeEEEEeCC---CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEE
Confidence 33445689999999999987 666 999999999999999987322 456789999999999999 688999
Q ss_pred EeeCCCeEEEeeCCCC---Ceeeee-eccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEE
Q 018784 78 SGSADFTAKLWDALTG---DEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (350)
Q Consensus 78 s~s~Dg~v~vWd~~~~---~~~~~~-~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 152 (350)
+++.||.|++||+.++ .....+ .|...|++++|+|++. +|++|+.|+.|++||+.....+......|...|.+++
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~ 328 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 328 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEE
Confidence 9999999999999876 344444 6889999999999987 6889999999999999876666666777899999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEECCC--------------CceeEeecC-CCCeEEEEEecCCc-EEE-EEcCCcEEEEEC
Q 018784 153 WLHSDQTILSSCTDSGGVRLWDARS--------------GKIVQTLET-KSPVTSAEVSRDGR-YIT-TADGSSVKFWDA 215 (350)
Q Consensus 153 ~~~~~~~~~~s~~~dg~i~iwd~~~--------------~~~~~~~~~-~~~v~~~~~~~~~~-~l~-~~~~~~i~vwd~ 215 (350)
|++.+..++++++.|++|++||++. .+.+..... ...+..++|+|++. +++ ++.++.|++|++
T Consensus 329 ~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 329 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp ECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred ECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 9988888899999999999999987 244455444 45799999999998 554 556899999998
Q ss_pred CCc
Q 018784 216 NHF 218 (350)
Q Consensus 216 ~~~ 218 (350)
...
T Consensus 409 ~~~ 411 (430)
T 2xyi_A 409 AEN 411 (430)
T ss_dssp CHH
T ss_pred ccc
Confidence 653
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=6.4e-26 Score=209.11 Aligned_cols=268 Identities=14% Similarity=0.064 Sum_probs=201.6
Q ss_pred eEeeccCCceeEEEeccc-----------CCCccEEEEEeCC------CCeeEeeCCCCceeeeccCccCCeEEEEECCC
Q 018784 10 LVCHGHSRPVVDLFYSPI-----------TPDGFFLVSASKD------SSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN 72 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~-----------s~dg~~lasgs~d------~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~ 72 (350)
..+.+|...+..+++++. .+.+..++.++.+ ++|++||... .....+.+|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 335788888887776531 1124456666654 7899999874 456788899999999999999
Q ss_pred CcEEEEeeCCC---eEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEE-EeeCCCe--EEEEECCCCCCCCeeecCCCC
Q 018784 73 ALFSASGSADF---TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKI--LRIFDLNRPDAPPREVGNSSG 146 (350)
Q Consensus 73 ~~~l~s~s~Dg---~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sg~~d~~--v~vwd~~~~~~~~~~~~~~~~ 146 (350)
++.+++++.|+ .|++||+.+++......|...+.+++|+|+|+.|+ +++.|+. |.+||+.++.. ..+..+..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCC
Confidence 99999999885 99999999988776667888999999999999887 6666554 99999976542 44455677
Q ss_pred cEEEEEEeCCCCcEEEEEeCCC--eEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc----CCcEEEEECCCcce
Q 018784 147 SIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD----GSSVKFWDANHFGL 220 (350)
Q Consensus 147 ~v~~~~~~~~~~~~~~s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~vwd~~~~~~ 220 (350)
.+.+++|++++..+++++..++ .|.+||+.+++..........+..++|+|+|++|+.+. +..|.+||+.+...
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 8999999976665666554455 68888998887544333456788899999999886543 24799999988765
Q ss_pred eeeeecCCCCceeEecCCCCcEEEEecCCC---eEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC
Q 018784 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDM---WVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE 283 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~---~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~ 283 (350)
.. +..........+.| ++++|++++.++ .|++||+. +.....+.+|.+.|.+++|+|...
T Consensus 348 ~~-l~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 348 QV-LSSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EE-CCCSSSCEEEEECT-TSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EE-ecCCCCcCCeEEcC-CCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 32 32222344556665 578888887776 79999986 556678889999999999999753
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.7e-24 Score=192.84 Aligned_cols=270 Identities=8% Similarity=0.056 Sum_probs=199.1
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEe-eCCCeEEEeeCCCCCe-eeeeeccccEeE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASG-SADFTAKLWDALTGDE-KHSFEHKHIVRA 107 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~-s~Dg~v~vWd~~~~~~-~~~~~h~~~V~~ 107 (350)
.+..+++++.+++|++||.++++.+..+..+...+ .++|++++.+++.+ ..++.|.+||..+++. ...+.+......
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 45668899999999999999999988887776667 99999999865554 4489999999998876 555554444455
Q ss_pred -EEEcCCCCeEEEeeCCC---eEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCe-EEEEECCCCcee-
Q 018784 108 -CAFSEDTHLLLTGGFEK---ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG-VRLWDARSGKIV- 181 (350)
Q Consensus 108 -~~~~~~~~~l~sg~~d~---~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~-i~iwd~~~~~~~- 181 (350)
++|+|++++|+++..++ .|.+||+.+.+... .. ........++|+++++.+++++..++. |.+|++.....+
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TI-PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE-EE-ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE-EE-ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 99999999999655553 99999997654322 22 234457899999877778888787788 999998754332
Q ss_pred ----EeecCCCCeEEEEEecCCcEE-EEE-cCCcEEEEECCCcce---eeeeecCCCCceeEecCCCCc-EEEEecCCCe
Q 018784 182 ----QTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGL---VKGYNMPCNTESASLEPKLGN-IFIAGGEDMW 251 (350)
Q Consensus 182 ----~~~~~~~~v~~~~~~~~~~~l-~~~-~~~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~l~sg~~d~~ 251 (350)
..+........+.|+|+|+++ ++. .++.|++||+.+.+. +..+........+.+.++ ++ ++++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~ 244 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD-GSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT-SSEEEEECSSEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCC-CCEEEEEEcCCCE
Confidence 233344567899999999855 444 367899999998877 666666555566777764 55 5556666888
Q ss_pred EEEEEcccCee--EEeecCC----CcC---EEEEEEcCCCCEEE-EecCCCcEEEecCCCCC
Q 018784 252 VHVFDFHTGEQ--IGCNKGH----HGP---VHCVRFSPGGESYA-SGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 252 i~v~d~~~~~~--~~~~~~h----~~~---v~~l~~sp~~~~la-sgs~Dg~v~vw~~~~~~ 303 (350)
|.+||+.+++. +..+..+ ..+ +..++|+|++++|+ ++..++.|.+||+..+.
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 99999998876 3333222 222 35689999999875 55567799999987543
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.5e-24 Score=214.11 Aligned_cols=277 Identities=10% Similarity=-0.002 Sum_probs=204.8
Q ss_pred CCceeEEEecccCCCccEEEEEeC-CC-----CeeEeeCCCCceeeeccCccCC------------------------eE
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASK-DS-----SPMLRNGETGDWIGTFEGHKGA------------------------VW 65 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~-d~-----~v~iw~~~~~~~~~~l~gH~~~------------------------V~ 65 (350)
...+..++|+| ||++|++++. |+ +|++||..+++....+..|... |.
T Consensus 36 ~~~~~~~~~Sp---dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAP---DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECT---TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEec---CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 44688998886 9999999998 88 8999999999887766655433 78
Q ss_pred EEEECCCCcEEEEeeCCCeEEEeeCCCC---CeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec
Q 018784 66 SCCLDANALFSASGSADFTAKLWDALTG---DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 66 ~v~~~~~~~~l~s~s~Dg~v~vWd~~~~---~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 142 (350)
.++|+||++++++++. +.|++||+.++ .......|...+..++|+|+|++|+.++ ++.|.+||+.++... ....
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~-~~~~ 189 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM-QLTA 189 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-ECCC
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE-Eecc
Confidence 8999999999998876 99999999888 5555556778899999999999999887 469999999764322 1111
Q ss_pred CCCCc----------------EEEEEEeCCCCcEEEEEeCCC--------------------------------eEEEEE
Q 018784 143 NSSGS----------------IRTVAWLHSDQTILSSCTDSG--------------------------------GVRLWD 174 (350)
Q Consensus 143 ~~~~~----------------v~~~~~~~~~~~~~~s~~~dg--------------------------------~i~iwd 174 (350)
.+... +..++|++++..++++..+.+ .|.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 12211 367889876666655543321 789999
Q ss_pred CCC-CceeEeec---CCCCeEEEEEecCCcEEEEEc------CCcEEEEECCCcceeeeeecCCC-----CceeEecCCC
Q 018784 175 ARS-GKIVQTLE---TKSPVTSAEVSRDGRYITTAD------GSSVKFWDANHFGLVKGYNMPCN-----TESASLEPKL 239 (350)
Q Consensus 175 ~~~-~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~------~~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~ 239 (350)
+.+ ++...... +...+..++| |||++|+... +..|++||+.+......+..+.. .....+.+ +
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp-d 347 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD-D 347 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT-T
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC-C
Confidence 988 77544332 3456889999 9999876432 35799999998776554433221 23455665 4
Q ss_pred CcEEEEecCCCeEEEEEcc-cCeeEEeecCCCcCEEEE-EEcCCCCEEE-EecCCC--cEEEecCCC
Q 018784 240 GNIFIAGGEDMWVHVFDFH-TGEQIGCNKGHHGPVHCV-RFSPGGESYA-SGSEDG--TIRIWQTNP 301 (350)
Q Consensus 240 ~~~l~sg~~d~~i~v~d~~-~~~~~~~~~~h~~~v~~l-~~sp~~~~la-sgs~Dg--~v~vw~~~~ 301 (350)
++++++++.|+.++||.+. ++. ...+..|...|..+ .|+|+++.|+ +++.|+ .++||++..
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 6788899999988888775 445 77788888889887 5999998764 566666 899998753
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.2e-24 Score=189.54 Aligned_cols=254 Identities=14% Similarity=0.071 Sum_probs=183.0
Q ss_pred EEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC-CCeeeeee-c-cccEeEEEEc
Q 018784 35 VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT-GDEKHSFE-H-KHIVRACAFS 111 (350)
Q Consensus 35 asgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~-~~~~~~~~-h-~~~V~~~~~~ 111 (350)
.+++.|++|++||..+++.. .+..|...|.+++|+|++.++++++ ++.|++||+.+ ++...... + ...+.+++|+
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp --CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 45678999999999988876 5666899999999999999999876 88999999988 76655543 3 3678999999
Q ss_pred CCCCeEEEee--CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEEC--CCCceeEeecCC
Q 018784 112 EDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA--RSGKIVQTLETK 187 (350)
Q Consensus 112 ~~~~~l~sg~--~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~--~~~~~~~~~~~~ 187 (350)
|++++|++++ .++..++|.+............+ ..+..++|++++..+++++..|+.+++|++ .+++........
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 9999999988 34555666543222223333333 348888998877777778888899999985 445544444455
Q ss_pred CCeEEEEEecCCcEEEE-E-cCCcEEEEECC-CcceeeeeecCCC-CceeEecCCCCcEEEEecCC-----------CeE
Q 018784 188 SPVTSAEVSRDGRYITT-A-DGSSVKFWDAN-HFGLVKGYNMPCN-TESASLEPKLGNIFIAGGED-----------MWV 252 (350)
Q Consensus 188 ~~v~~~~~~~~~~~l~~-~-~~~~i~vwd~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg~~d-----------~~i 252 (350)
..+..+.|+|++++++. + .++.+++|++. ....+..+..+.. ...+.+.+ ++++|++++.+ ..|
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEE
Confidence 67899999999987654 3 37788999875 3333333332221 22344555 57777777665 569
Q ss_pred EEEEcccCee--EEeecCCCcCEEEEEEcCCCCEEEEecCCC
Q 018784 253 HVFDFHTGEQ--IGCNKGHHGPVHCVRFSPGGESYASGSEDG 292 (350)
Q Consensus 253 ~v~d~~~~~~--~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg 292 (350)
++||+.+++. +..+.+|...+.+++|+|++++|++++.|.
T Consensus 252 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 252 QLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9999988765 444557888999999999999998877653
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.5e-23 Score=187.08 Aligned_cols=267 Identities=11% Similarity=0.156 Sum_probs=183.4
Q ss_pred cEEEEEeCCCCeeEeeCC-CCc--eeeeccCccCCeEEEEECCCCcEEEEeeCC-CeEEEeeCC--CCCe--eeeeeccc
Q 018784 32 FFLVSASKDSSPMLRNGE-TGD--WIGTFEGHKGAVWSCCLDANALFSASGSAD-FTAKLWDAL--TGDE--KHSFEHKH 103 (350)
Q Consensus 32 ~~lasgs~d~~v~iw~~~-~~~--~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D-g~v~vWd~~--~~~~--~~~~~h~~ 103 (350)
.++++++.|+.|++|+.. +++ .+.. ..|...+..++|+|++.++++++.+ +.|++|++. ++.. ...+....
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence 355555889999999985 343 3333 3477788899999999988888776 999999987 5543 23344445
Q ss_pred cEeEEEEcCCCCeEEEeeC-CCeEEEEECCCCCC-CCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCC-Cce
Q 018784 104 IVRACAFSEDTHLLLTGGF-EKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKI 180 (350)
Q Consensus 104 ~V~~~~~~~~~~~l~sg~~-d~~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~-~~~ 180 (350)
.+..++|+|++++|++++. ++.|.+||+..+.. ...........+..++|++++..+++++..++.|++||+.+ ++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 7899999999998876654 88999999842111 11111223345778888877666766665789999999987 654
Q ss_pred eE------eecCCCCeEEEEEecCCcEEE-EE-cCCcEEEEECCC--cce--eeeee-cCC------CCceeEecCCCCc
Q 018784 181 VQ------TLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANH--FGL--VKGYN-MPC------NTESASLEPKLGN 241 (350)
Q Consensus 181 ~~------~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~~--~~~--~~~~~-~~~------~~~~~~~~~~~~~ 241 (350)
.. .......+..++|+|++++++ ++ .++.|++||+.. ... ..... .+. ....+.+.+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 222345678899999998664 44 468899999953 222 22221 111 1123566664334
Q ss_pred EEEEecCCCeEEEEEcc--cC--eeEEeecCCCcCEEEEEEcCCCCEEEEec-CCCcEEEecCC
Q 018784 242 IFIAGGEDMWVHVFDFH--TG--EQIGCNKGHHGPVHCVRFSPGGESYASGS-EDGTIRIWQTN 300 (350)
Q Consensus 242 ~l~sg~~d~~i~v~d~~--~~--~~~~~~~~h~~~v~~l~~sp~~~~lasgs-~Dg~v~vw~~~ 300 (350)
+++++..++.|++||+. ++ +.+..+..+.. +.+++|+|++++|++++ .|+.|.+|+++
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 55577789999999998 33 34444544444 88999999999877766 68999999764
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.6e-24 Score=210.69 Aligned_cols=277 Identities=12% Similarity=0.000 Sum_probs=193.1
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccC---CeEEEEECCCCcEEEEeeCC---------CeE
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSAD---------FTA 85 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~---~V~~v~~~~~~~~l~s~s~D---------g~v 85 (350)
.+..++|+| ||+++++ +.|+++++||..+++....+.+|.. .|..++|+|||+++++++.+ +.+
T Consensus 18 ~~~~~~~sp---dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWIS---DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSS---SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcC---CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 356676665 9998876 7899999999999998888888875 48999999999999998775 788
Q ss_pred EEeeCCCCCeeeee---eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCC----------------
Q 018784 86 KLWDALTGDEKHSF---EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG---------------- 146 (350)
Q Consensus 86 ~vWd~~~~~~~~~~---~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~---------------- 146 (350)
.+||+.+++..... .|...+..++|+|+|+.|+.++. +.|++||+.++... .....+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~-~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI-RVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE-EEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE-EEecCCCCCceECcccceeEEEEe
Confidence 89999888753222 23445889999999999998886 79999999865432 22222222
Q ss_pred --cEEEEEEeCCCCcEEEEEeCC---------------------------------CeEEEEECCCCceeEeecC-----
Q 018784 147 --SIRTVAWLHSDQTILSSCTDS---------------------------------GGVRLWDARSGKIVQTLET----- 186 (350)
Q Consensus 147 --~v~~~~~~~~~~~~~~s~~~d---------------------------------g~i~iwd~~~~~~~~~~~~----- 186 (350)
.+..++|+|++..++.+..++ .+|++||+.+++....+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 236899987665555443321 2799999998886555553
Q ss_pred --CCCeEEEEEecCCcEEEEEc-----CCcEEEEECCCcceeeeeecC--CCC----ceeEecCCCCcEEE-E-ecCCC-
Q 018784 187 --KSPVTSAEVSRDGRYITTAD-----GSSVKFWDANHFGLVKGYNMP--CNT----ESASLEPKLGNIFI-A-GGEDM- 250 (350)
Q Consensus 187 --~~~v~~~~~~~~~~~l~~~~-----~~~i~vwd~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~l~-s-g~~d~- 250 (350)
...+..+.|+|||++++... +..|++||+.+.+....+... ... ....+.|+ ++.|+ . +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD-GRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT-SCSEEEEEEECCSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC-CCeEEEEEecccCC
Confidence 34678899999999885542 246999999887765443221 111 24566664 55444 3 55666
Q ss_pred -----eEEEEE-cccCee--EEeecCCCcCEEE-EEEcCCCCEEEEecCC---CcEEEecCCC
Q 018784 251 -----WVHVFD-FHTGEQ--IGCNKGHHGPVHC-VRFSPGGESYASGSED---GTIRIWQTNP 301 (350)
Q Consensus 251 -----~i~v~d-~~~~~~--~~~~~~h~~~v~~-l~~sp~~~~lasgs~D---g~v~vw~~~~ 301 (350)
.|++|| ..++.. ...+..+...+.. ++|+|+++.|+..+.+ +.++||+++.
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 466677 344441 4455544444544 6999999998755544 8899998864
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=9.1e-24 Score=187.99 Aligned_cols=264 Identities=11% Similarity=0.087 Sum_probs=193.4
Q ss_pred cEEEEEeCCCCeeEeeCCCCceeeeccC-ccC-CeEEEEECCCCcE-EEEeeCCCeEEEeeCCCCCeeeeeeccc-----
Q 018784 32 FFLVSASKDSSPMLRNGETGDWIGTFEG-HKG-AVWSCCLDANALF-SASGSADFTAKLWDALTGDEKHSFEHKH----- 103 (350)
Q Consensus 32 ~~lasgs~d~~v~iw~~~~~~~~~~l~g-H~~-~V~~v~~~~~~~~-l~s~s~Dg~v~vWd~~~~~~~~~~~h~~----- 103 (350)
.+|++++.+++|++||..+++.+..+.. +.. .+..+++++++.. +++++.++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999999887763 322 4778999999965 5677778999999999988776665332
Q ss_pred -cEeEEEEcCCCCeEEEee------------CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 104 -IVRACAFSEDTHLLLTGG------------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 104 -~V~~~~~~~~~~~l~sg~------------~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
.+..++|+|++++|++++ .++.|.+||+.+.+... ... ....+..++|++++..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFE-APRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEE-CCSSCCCEEECTTSSCEEEE---SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE-EEe-CCCCcceeEECCCCCEEEEe---CCeE
Confidence 678899999999998886 57999999997544322 222 23456678888766655554 5789
Q ss_pred EEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc--CC-----------------------cEEEEECCCcceeeeee
Q 018784 171 RLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD--GS-----------------------SVKFWDANHFGLVKGYN 225 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~-----------------------~i~vwd~~~~~~~~~~~ 225 (350)
.+||+.+++.+..+........+.++|+++.+.... ++ .|.+||+.+.+.. ...
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~ 235 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MRE 235 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eee
Confidence 999999998877766433112336788887554322 12 4689999887654 222
Q ss_pred cC---CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 226 MP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 226 ~~---~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
.. .....+.+.+ ++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.++.|++||+...
T Consensus 236 ~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 236 VRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred cCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 21 2233456665 56777776 799999999999887766543 45789999999999988899999999998766
Q ss_pred Ccc
Q 018784 303 NHE 305 (350)
Q Consensus 303 ~~~ 305 (350)
+..
T Consensus 312 ~~~ 314 (337)
T 1pby_B 312 EKK 314 (337)
T ss_dssp CEE
T ss_pred cEE
Confidence 544
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2.6e-23 Score=212.64 Aligned_cols=282 Identities=13% Similarity=0.093 Sum_probs=204.2
Q ss_pred eEeeccCCceeEEEecccCCCccEEEEEeCC------CCeeEeeCCCCceeeeccCccCCe-------EEEEECCCCcEE
Q 018784 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKD------SSPMLRNGETGDWIGTFEGHKGAV-------WSCCLDANALFS 76 (350)
Q Consensus 10 ~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d------~~v~iw~~~~~~~~~~l~gH~~~V-------~~v~~~~~~~~l 76 (350)
..+.+|...+.+++||| ||++||.++.+ ..|++|+..+++ ...+.+|...+ ..++|+||++++
T Consensus 46 ~~lt~~~~~v~~~~~SP---DG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll 121 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFP---DGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLI 121 (1045)
T ss_dssp EEEECSSSEEEEEEECT---TSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEE
T ss_pred EEeeeCCCcccCeEECC---CCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEE
Confidence 34578999999999986 99999988754 368999998877 56889999888 999999999988
Q ss_pred EEeeCC------CeEEEeeCCCCCeeee--------------------------------------------------ee
Q 018784 77 ASGSAD------FTAKLWDALTGDEKHS--------------------------------------------------FE 100 (350)
Q Consensus 77 ~s~s~D------g~v~vWd~~~~~~~~~--------------------------------------------------~~ 100 (350)
++++.+ ..|.+|++.++..... ..
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 888765 3577777755432211 12
Q ss_pred ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce
Q 018784 101 HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (350)
Q Consensus 101 h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~ 180 (350)
|...+.++.|+++ .++++++.|+++++|.+............+. .+...+|++++..++.+ .++.|.+||+...+
T Consensus 202 ~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~--~~~~i~~~d~~~~~- 276 (1045)
T 1k32_A 202 MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS--KGGSIYIFNPDTEK- 276 (1045)
T ss_dssp CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE--ETTEEEEECTTTCC-
T ss_pred CCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE--eCCEEEEecCCceE-
Confidence 4556777888887 6667788889999998653222223333333 34566888766555544 47899999995443
Q ss_pred eEeecCC------------CCeEEEEEe-cCCcEEEEEcCCcEEEEECCCcceeeeeecCC-CCceeEecCCCCcEEEEe
Q 018784 181 VQTLETK------------SPVTSAEVS-RDGRYITTADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAG 246 (350)
Q Consensus 181 ~~~~~~~------------~~v~~~~~~-~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~sg 246 (350)
+..+... ..+..+.|+ |+|++++.+.++.+.+|+.............. ......+. +++.++++
T Consensus 277 l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s--dg~~l~~~ 354 (1045)
T 1k32_A 277 IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD--TKVAFIHG 354 (1045)
T ss_dssp EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS--SEEEEEEE
T ss_pred eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc--CCCeEEEE
Confidence 3344432 258899999 99998887778899999988765433211111 12233444 67888888
Q ss_pred cCCCeEE-EEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 247 GEDMWVH-VFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 247 ~~d~~i~-v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+.+..+. +||+.+++... +.+|...+..++|+|+|++|++++.++.|++||+....
T Consensus 355 s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence 8888888 99988776543 44788899999999999999999999999999986544
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=2.6e-22 Score=179.94 Aligned_cols=268 Identities=12% Similarity=0.101 Sum_probs=200.4
Q ss_pred CCceeEEEecccCCCccEEEEEeC-------CCCeeEeeCCCCceeeeccCccCCeEEEEECCCCc-EEEEeeCCCeEEE
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASK-------DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKL 87 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~-------d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~-~l~s~s~Dg~v~v 87 (350)
...+..++|+| +|++|++++. +++|.+||..+++.+..+... ..+..+++++++. ++++...++.|.+
T Consensus 40 ~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQ---QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEET---TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECC---CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEE
Confidence 44677888886 8888877774 567999999999988877643 3466789999998 5566677899999
Q ss_pred eeCCCCCeeeeeeccc----------cEeEEEEcCCCCeEEEee--CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeC
Q 018784 88 WDALTGDEKHSFEHKH----------IVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLH 155 (350)
Q Consensus 88 Wd~~~~~~~~~~~h~~----------~V~~~~~~~~~~~l~sg~--~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (350)
||..+++....+.... .+.+++|+|+++++++++ .++.|.+||+.+.+... ....+...+..++|++
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT-AIQNTGKMSTGLALDS 194 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE-EECCCCTTCCCCEEET
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE-EecCCCCccceEEECC
Confidence 9999988776664321 278899999999887765 48899999997654322 2222334467788886
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEeecC-----CCCeEEEEEecCCcEEEEE-c-CCcEEEEECCCcceeeeeecCC
Q 018784 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLET-----KSPVTSAEVSRDGRYITTA-D-GSSVKFWDANHFGLVKGYNMPC 228 (350)
Q Consensus 156 ~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~-~-~~~i~vwd~~~~~~~~~~~~~~ 228 (350)
+++. ++.+..++.|.+||+.+++.+..+.. ...+..++++|+++++..+ . ++.|.+||..+.+.+..+..+.
T Consensus 195 dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 195 EGKR-LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTTE-EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCE-EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 5554 44556689999999999988877654 3357789999999866544 3 4789999999988877776644
Q ss_pred CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCC
Q 018784 229 NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSED 291 (350)
Q Consensus 229 ~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~D 291 (350)
...+.+.+....++++...++.|.+||+.+++.+..+.... .+.+++|+|++++|+.+..+
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 34566666544467777789999999999998887776443 67999999999976655544
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=9e-23 Score=201.34 Aligned_cols=275 Identities=12% Similarity=0.105 Sum_probs=195.4
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc--eeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~--~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
.|..++|+| ||++|++++. ++|++||+.+++ .+..+..|...+..++|+|||++++.++ ++.|++||+.+++.
T Consensus 110 ~v~~~~~Sp---Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSP---DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECT---TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECC---CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 377888876 9999999887 999999998883 4456888889999999999999998876 56999999988765
Q ss_pred eeeee-cccc----------------EeEEEEcCCCCeEEEeeCCC---------------------------------e
Q 018784 96 KHSFE-HKHI----------------VRACAFSEDTHLLLTGGFEK---------------------------------I 125 (350)
Q Consensus 96 ~~~~~-h~~~----------------V~~~~~~~~~~~l~sg~~d~---------------------------------~ 125 (350)
..... +... +.+++|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 54332 2221 47899999999999988765 7
Q ss_pred EEEEECCC-CCCCCeeec-CCCCcEEEEEEeCCCCcEEEEEe----CCCeEEEEECCCCceeEeecCCC-----CeEEEE
Q 018784 126 LRIFDLNR-PDAPPREVG-NSSGSIRTVAWLHSDQTILSSCT----DSGGVRLWDARSGKIVQTLETKS-----PVTSAE 194 (350)
Q Consensus 126 v~vwd~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~----~dg~i~iwd~~~~~~~~~~~~~~-----~v~~~~ 194 (350)
|.+||+.+ +........ .+...+..++| +++..+++++. .+..|++||+.+++....+..+. .+..+.
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88999876 543221111 35677899999 76666665543 35689999999998766554332 345789
Q ss_pred EecCCcEEEEEc-CCcEEEEECC-CcceeeeeecCCCCc-ee-EecCCCCcEEEEecCCC--eEEEEEccc-CeeEEeec
Q 018784 195 VSRDGRYITTAD-GSSVKFWDAN-HFGLVKGYNMPCNTE-SA-SLEPKLGNIFIAGGEDM--WVHVFDFHT-GEQIGCNK 267 (350)
Q Consensus 195 ~~~~~~~l~~~~-~~~i~vwd~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~sg~~d~--~i~v~d~~~-~~~~~~~~ 267 (350)
|+|||++++++. ++.+++|... ... ...+....... .. .+.+....++++++.++ .+++|++.. +.....+.
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 999999776654 5666776554 222 33333322222 23 35654334555666666 899999874 55555665
Q ss_pred CCCcCEEEEEEcCCCCEEEEecCC----CcEEEecCC
Q 018784 268 GHHGPVHCVRFSPGGESYASGSED----GTIRIWQTN 300 (350)
Q Consensus 268 ~h~~~v~~l~~sp~~~~lasgs~D----g~v~vw~~~ 300 (350)
. ...+.+++|+|++++|+....+ ..+++|+..
T Consensus 423 ~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 423 K-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp C-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred c-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 5 6678999999999988755433 468888864
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=9.2e-22 Score=175.10 Aligned_cols=244 Identities=11% Similarity=0.047 Sum_probs=180.5
Q ss_pred ccCCceeEEEecccCCCccEEEEEeC-CCCeeEeeCCCCce-eeeccCccCCeEEEEECCCCcEEEEeeCCC---eEEEe
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDANALFSASGSADF---TAKLW 88 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~-d~~v~iw~~~~~~~-~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg---~v~vW 88 (350)
.+..++ .++|+| +|++|++++. ++.+.+||..+++. ...+..+..+..+++++|++.+++++..++ .|++|
T Consensus 38 ~~~~~~-~~~~s~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 38 LGYDFV-DTAITS---DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCCCEE-EEEECS---SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred ccCCcc-eEEEcC---CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 445556 888886 9986655555 88999999999988 777887777776699999999988655553 99999
Q ss_pred eCCCCCeeeeeeccccEeEEEEcCCCCeEEEe-eCCCe-EEEEECCCCCCCC---eeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKI-LRIFDLNRPDAPP---REVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 89 d~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg-~~d~~-v~vwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
|+.+++.+..+.....+.+++|+|++++++++ ..++. |.+|++....... .........+..++|+++++.++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 99988887777777778999999999866554 55577 9999987533221 1112334457889998877668888
Q ss_pred EeCCCeEEEEECCCCce---eEeecCCCCeEEEEEecCCcEEEEEc--CCcEEEEECCCcce--eeeeecC----CCC--
Q 018784 164 CTDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGL--VKGYNMP----CNT-- 230 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~~~~--~~~~~~~----~~~-- 230 (350)
+..+++|.+||+++++. +..+.....+..++|+|+|+++..+. ++.|.+||+.+.+. +..+... ...
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF 273 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred eCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence 88889999999999988 77777777788899999999765543 46799999988766 3322211 111
Q ss_pred --ceeEecCCCCcEEEEecCCCeEEEEEcccCe
Q 018784 231 --ESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 231 --~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~ 261 (350)
..+.+.++...+++++..++.|.+||+.+..
T Consensus 274 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 1246666533455666777899999997644
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.7e-22 Score=198.33 Aligned_cols=277 Identities=11% Similarity=0.080 Sum_probs=189.9
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC----
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT---- 92 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~---- 92 (350)
.+|.+++|+| |+ .++.+ .|+++++||..+++.. .+..|...+..++|+|+|+.++. +.|+.|++||+.+
T Consensus 82 ~~v~~~~~sp---d~-~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAG---RG-LVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETT---TT-EEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSC
T ss_pred cCceeEEECC---CC-eEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCccccc
Confidence 5789999886 84 44444 3599999999888765 44556777888999999999988 4789999999988
Q ss_pred -CCeeeeee-cccc--------------EeEEEEcCCCCeEEEee---------------------------------CC
Q 018784 93 -GDEKHSFE-HKHI--------------VRACAFSEDTHLLLTGG---------------------------------FE 123 (350)
Q Consensus 93 -~~~~~~~~-h~~~--------------V~~~~~~~~~~~l~sg~---------------------------------~d 123 (350)
++...... +... +.+++|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 76554332 2222 48899999999999987 44
Q ss_pred CeEEEEECCCCCCCCeee-cCCCCcEEEEEEeCCCCcEEEEEeCCC-----eEEEEECCCCceeEeec---CC---CCeE
Q 018784 124 KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDSG-----GVRLWDARSGKIVQTLE---TK---SPVT 191 (350)
Q Consensus 124 ~~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~~dg-----~i~iwd~~~~~~~~~~~---~~---~~v~ 191 (350)
..|.+||+.++....... ..+...+..++|++++..++++ +.++ +|++||+.+++....+. .. ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVA-EVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEE-EECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEE-EeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 679999997654321111 2355678899999765555544 3443 89999999984333332 11 1245
Q ss_pred EEEEec--CCcEEEEEc-CCcEEEEECC-CcceeeeeecCCCCc-e-eEecCCCCcEEEEecCCC----eEEEEEcccCe
Q 018784 192 SAEVSR--DGRYITTAD-GSSVKFWDAN-HFGLVKGYNMPCNTE-S-ASLEPKLGNIFIAGGEDM----WVHVFDFHTGE 261 (350)
Q Consensus 192 ~~~~~~--~~~~l~~~~-~~~i~vwd~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~sg~~d~----~i~v~d~~~~~ 261 (350)
.+.|+| +|++++++. ++.+++|+.. +.+.++.+....... . ..+.+....++++++.++ .|+.||+.+++
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 689999 999887664 6778888765 444444444332222 2 456664334555666555 67777777665
Q ss_pred eEEeecCCCcCEEEEEEcCCCCEEEEecCC----CcEEEecCCCCC
Q 018784 262 QIGCNKGHHGPVHCVRFSPGGESYASGSED----GTIRIWQTNPPN 303 (350)
Q Consensus 262 ~~~~~~~h~~~v~~l~~sp~~~~lasgs~D----g~v~vw~~~~~~ 303 (350)
...+ .|...+.+++|+|++++++..+.+ +.|++||+...+
T Consensus 394 -~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 394 -TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp -CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred -ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3333 367779999999999988765443 569999986554
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=1.1e-21 Score=174.92 Aligned_cols=264 Identities=14% Similarity=0.132 Sum_probs=181.4
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCC-CCeeEeeCC--CCc--eeeeccCccCCeEEEEECCCCcEEEEee-CCCeEE
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKD-SSPMLRNGE--TGD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAK 86 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d-~~v~iw~~~--~~~--~~~~l~gH~~~V~~v~~~~~~~~l~s~s-~Dg~v~ 86 (350)
..|...+.+++|+| +|++|++++.+ +.+++|++. +++ .+..+..+. .+..++|++++.+++.++ .++.|.
T Consensus 34 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP---DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp EECSSCCCCEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEE
T ss_pred EecCCCCceEEECC---CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEE
Confidence 35777889998886 99988888886 899999987 555 344555544 778899999999776555 589999
Q ss_pred EeeCC---CCCeeeeeeccccEeEEEEcCCCCeEEEee-CCCeEEEEECCC-CCCCC----eeecCCCCcEEEEEEeCCC
Q 018784 87 LWDAL---TGDEKHSFEHKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNR-PDAPP----REVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 87 vWd~~---~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~~-~~~~~----~~~~~~~~~v~~~~~~~~~ 157 (350)
+||+. +......+.....+.+++|+|+++++++++ .++.|.+||+.. +.... .........+..++|.+.+
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 99984 333444444555689999999999888777 899999999975 32211 1122234567889998776
Q ss_pred CcEEEEEeCCCeEEEEECCC--Cce--eEeec---C----CCCeEEEEEecCCcEEE-EE-cCCcEEEEECC----Ccce
Q 018784 158 QTILSSCTDSGGVRLWDARS--GKI--VQTLE---T----KSPVTSAEVSRDGRYIT-TA-DGSSVKFWDAN----HFGL 220 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~--~~~--~~~~~---~----~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~----~~~~ 220 (350)
..+++++..++.|.+||+.. ++. ...+. . ...+..++|+|++++++ +. .++.|.+||+. +...
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 66777777889999999953 432 22222 1 23466899999998765 44 46899999997 3344
Q ss_pred eeeeecCCCCceeEecCCCCcEEEEec-CCCeEEEEEcc--cCee--EEeecCCCcCEEEEEEcCCC
Q 018784 221 VKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFDFH--TGEQ--IGCNKGHHGPVHCVRFSPGG 282 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d~~i~v~d~~--~~~~--~~~~~~h~~~v~~l~~sp~~ 282 (350)
+..+........+.+.+. +++|++++ .++.|.+|++. +++. +..+.. .....+++|.|+.
T Consensus 270 ~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDHS-GKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHE 334 (343)
T ss_dssp EEEEECSSSCCCEEECTT-SSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC
T ss_pred eeeecCCCccceEEECCC-CCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEccc
Confidence 444444444556667664 56555555 78999999654 5543 333332 2345677777654
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=3.9e-22 Score=178.37 Aligned_cols=262 Identities=8% Similarity=0.005 Sum_probs=182.3
Q ss_pred CCccEEEEEeCCCCeeEeeCCCCceeeeccCcc-CCeEEEEECCCCcE-EEEeeCCCeEEEeeCCCCCeeeeeec-----
Q 018784 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALF-SASGSADFTAKLWDALTGDEKHSFEH----- 101 (350)
Q Consensus 29 ~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~-~~V~~v~~~~~~~~-l~s~s~Dg~v~vWd~~~~~~~~~~~h----- 101 (350)
+++.++++++.+++|++||..+++.+..+..+. ..+..+++++++++ ++++..++.|.+||+.+++....+..
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 488899999999999999999999988887553 25678999999975 45667899999999998877665543
Q ss_pred --cccEeEEEEcCCCCeEEEeeCC------------CeEEEEECCCCCCCC-eeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 102 --KHIVRACAFSEDTHLLLTGGFE------------KILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 102 --~~~V~~~~~~~~~~~l~sg~~d------------~~v~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
...+..++|+|++++|++++.+ +.|.+||+.++.... .....+...+.+++|++++. +++ ++.
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~-~~~ 166 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV-AGP 166 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE-ESS
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE-ccC
Confidence 2237889999999999998865 899999987532211 11122334577888887665 555 433
Q ss_pred CCeEEEEECCCCceeEeecCCC-------------------------CeEEEEEecCCcE-----------E-EEEcCCc
Q 018784 167 SGGVRLWDARSGKIVQTLETKS-------------------------PVTSAEVSRDGRY-----------I-TTADGSS 209 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~-----------l-~~~~~~~ 209 (350)
.|.+||+.+++.+..+.... ....+.+++++.. + .-...+.
T Consensus 167 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp --SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred --cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 49999999998877665432 2233555544311 1 1112344
Q ss_pred EEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEec
Q 018784 210 VKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 210 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs 289 (350)
+++|+... .........+.+.++++++++ ++.|++||+.+++.+..+... ..+.+++|+|++++|++++
T Consensus 245 ~~~~~~~~--------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 245 THTQEFAD--------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEEEEEEE--------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEES
T ss_pred EEeccccc--------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEec
Confidence 55554321 112233455555256777776 889999999999887766533 3467999999999888888
Q ss_pred CCCcEEEecCCCCCcc
Q 018784 290 EDGTIRIWQTNPPNHE 305 (350)
Q Consensus 290 ~Dg~v~vw~~~~~~~~ 305 (350)
.++.|++||+...+..
T Consensus 314 ~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp BSSEEEEEETTTTEEE
T ss_pred CCCeEEEEecccccee
Confidence 8999999998765443
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=2.7e-21 Score=173.44 Aligned_cols=260 Identities=11% Similarity=0.093 Sum_probs=174.5
Q ss_pred CCCCeeEee--CCCCceee-eccCccCCeEEEEECCCCcEEEEeeC--CCeEEEeeCCCCCee--ee-eeccccEeEEEE
Q 018784 39 KDSSPMLRN--GETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA--DFTAKLWDALTGDEK--HS-FEHKHIVRACAF 110 (350)
Q Consensus 39 ~d~~v~iw~--~~~~~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~--Dg~v~vWd~~~~~~~--~~-~~h~~~V~~~~~ 110 (350)
.++.+.+|. .++++... ....+......++|+|++++++++.. ++.|++|++.++... .. ..+...+..++|
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 345566655 45666543 33445566778999999995444432 799999999766532 22 236677899999
Q ss_pred cCCCCeEEEee-CCCeEEEEECCCCCCCC--eeecC---------CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECC-C
Q 018784 111 SEDTHLLLTGG-FEKILRIFDLNRPDAPP--REVGN---------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR-S 177 (350)
Q Consensus 111 ~~~~~~l~sg~-~d~~v~vwd~~~~~~~~--~~~~~---------~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~-~ 177 (350)
+|++++|++++ .++.|.+|++....... ..... ....+..++|++++. ++++...++.|++||+. +
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCC
Confidence 99999888887 68999999986322111 11111 123477899987666 88888888999999998 5
Q ss_pred CceeE--ee--cCCCCeEEEEEecCCcEEEEE--cCCcEEEEECCC--cce--eeeeec-CC------CCceeEecCCCC
Q 018784 178 GKIVQ--TL--ETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANH--FGL--VKGYNM-PC------NTESASLEPKLG 240 (350)
Q Consensus 178 ~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~--~~~~i~vwd~~~--~~~--~~~~~~-~~------~~~~~~~~~~~~ 240 (350)
++... .+ ........++|+|+|++++.+ .++.|++|++.. ... +..... +. ....+.+.+ ++
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG 251 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DG 251 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TS
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CC
Confidence 54322 11 223467789999999965543 357899998764 332 222221 11 123355666 46
Q ss_pred cE-EEEecCCCeEEEEEccc-C--eeEEeecCCCcCEEEEEEcCCCCEEEEecC-CCcEEEecCC
Q 018784 241 NI-FIAGGEDMWVHVFDFHT-G--EQIGCNKGHHGPVHCVRFSPGGESYASGSE-DGTIRIWQTN 300 (350)
Q Consensus 241 ~~-l~sg~~d~~i~v~d~~~-~--~~~~~~~~h~~~v~~l~~sp~~~~lasgs~-Dg~v~vw~~~ 300 (350)
++ ++++..++.|.+|++.. + +.+..+..+...+..++|+|++++|++++. ++.|.+|+++
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 64 46777799999999963 3 445556666777899999999998877665 5899999664
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=8e-22 Score=193.55 Aligned_cols=265 Identities=15% Similarity=0.078 Sum_probs=181.8
Q ss_pred ccEEEEEeCCCCeeEeeCCCCcee-eeccCcc-----------------CCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWI-GTFEGHK-----------------GAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~-~~l~gH~-----------------~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
|..+++++.|+ | +||..+++.+ ..+..|. ..|.+++|+|++.++++ .|+.|++||+.+
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~--~~~~i~~~d~~~ 110 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLF--TQGGLVGFDMLA 110 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEE--ETTEEEEEETTT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEE--ECCEEEEEECCC
Confidence 44566777788 8 9999999873 4444443 46999999999545554 469999999988
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC-----CCCCCeeecCCCCc--------------EEEEEE
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR-----PDAPPREVGNSSGS--------------IRTVAW 153 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----~~~~~~~~~~~~~~--------------v~~~~~ 153 (350)
++......+...+.+++|+|+|+.|+.+ .|+.|++||+.+ +... .....+... +..+.|
T Consensus 111 ~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 111 RKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI-AVTIDGTETLVYGQAVHQREFGIEKGTFW 188 (706)
T ss_dssp TEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE-ESCSCCBTTEEESSCCGGGCTTCCCSEEE
T ss_pred CceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE-EeccCCCCCeEcccchhhhhcCCCceEEE
Confidence 8766666677788999999999999885 689999999986 4332 111222222 478889
Q ss_pred eCCCCcEEEEEe--------------------------------CCCeEEEEECCCCceeEeec---CCCCeEEEEEecC
Q 018784 154 LHSDQTILSSCT--------------------------------DSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRD 198 (350)
Q Consensus 154 ~~~~~~~~~s~~--------------------------------~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~ 198 (350)
+|++..++++.. .+..|++||+.+++...... ....+..+.|+||
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 876555554431 34689999999887654432 2356889999999
Q ss_pred CcEEEEE-cCC-----cEEEEECCCcceeeeee-cCCC-----CceeEecC-CCCcEEEEecCCCeEEEEEcc-cCeeEE
Q 018784 199 GRYITTA-DGS-----SVKFWDANHFGLVKGYN-MPCN-----TESASLEP-KLGNIFIAGGEDMWVHVFDFH-TGEQIG 264 (350)
Q Consensus 199 ~~~l~~~-~~~-----~i~vwd~~~~~~~~~~~-~~~~-----~~~~~~~~-~~~~~l~sg~~d~~i~v~d~~-~~~~~~ 264 (350)
|++|+.+ .++ .|++||+.++...+.+. .... ...+.+.+ .+++++++++.|+.+++|++. ++..+.
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE
Confidence 9977653 333 79999998873332221 1111 12345655 157889999999999999887 677777
Q ss_pred eecCCCcCEEE-EEEcCCCCEEEE-ecCCC----cEEEecCCC
Q 018784 265 CNKGHHGPVHC-VRFSPGGESYAS-GSEDG----TIRIWQTNP 301 (350)
Q Consensus 265 ~~~~h~~~v~~-l~~sp~~~~las-gs~Dg----~v~vw~~~~ 301 (350)
.+..|...+.. ++|+|+++.|+. ++.++ .|+.|+...
T Consensus 349 ~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 349 QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 88888888877 899999987754 44554 566666544
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.3e-21 Score=200.18 Aligned_cols=276 Identities=13% Similarity=0.006 Sum_probs=210.2
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCC-CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
+.+|...+.++.|++ + .++++++.|++++||.... +.....+..|. .+...+|+|+++.++.+ .++.|.+||+
T Consensus 199 l~~~~~~v~~~~~s~---d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVG---H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp EECCSSCCEEEEEET---T-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECT
T ss_pred CcCCCCcccceEEeC---C-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecC
Confidence 378999999999985 6 7778888999999998643 44556677665 45677999999988877 5999999998
Q ss_pred CCCCeeeeee------------ccccEeEEEEc-CCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCC-cEEEEEEeCC
Q 018784 91 LTGDEKHSFE------------HKHIVRACAFS-EDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG-SIRTVAWLHS 156 (350)
Q Consensus 91 ~~~~~~~~~~------------h~~~V~~~~~~-~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~-~v~~~~~~~~ 156 (350)
..... ..+. |...+.+++|+ |+|+.|++++ ++.+.+|++..+. ......+.. .+..++|+
T Consensus 273 ~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-- 346 (1045)
T 1k32_A 273 DTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-- 346 (1045)
T ss_dssp TTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS--
T ss_pred CceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc--
Confidence 44332 2332 33468999999 9999999887 7899999987543 222344555 78889888
Q ss_pred CCcEEEEEeCCCeEE-EEECCCCceeEeecCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC-Ccee
Q 018784 157 DQTILSSCTDSGGVR-LWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESA 233 (350)
Q Consensus 157 ~~~~~~s~~~dg~i~-iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~-~~~~ 233 (350)
++..++.+++++.+. +||+.+++......+...+..++|+|+|++|+.+ .++.|++||+.++........+.. ....
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 555566666788888 9999887654444344678999999999988654 567999999998776655533322 3456
Q ss_pred EecCCCCcEEEEecCC----------CeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 234 SLEPKLGNIFIAGGED----------MWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d----------~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.+.| ++++|++++.+ +.|++||+.+++ +..+..|...+.+++|+|+|++|+.++.++...+|+...
T Consensus 427 ~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 427 TISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred EECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 6666 57888777654 489999999887 667788888899999999999999999999888888653
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=5.6e-21 Score=171.24 Aligned_cols=241 Identities=12% Similarity=0.118 Sum_probs=180.8
Q ss_pred cCCeEEEEECCCCcEEEEeeC-------CCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEE-EeeCCCeEEEEECC
Q 018784 61 KGAVWSCCLDANALFSASGSA-------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLN 132 (350)
Q Consensus 61 ~~~V~~v~~~~~~~~l~s~s~-------Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~ 132 (350)
...+..+++++++.+++.++. ++.|.+||..+++....+.....+..++|+|++++++ +...++.|.+||+.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 356788999999987777663 6789999999998888877767788999999999555 55668999999998
Q ss_pred CCCCCCeeecCCCC--------cEEEEEEeCCCCcEEEEE-eCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCcEE
Q 018784 133 RPDAPPREVGNSSG--------SIRTVAWLHSDQTILSSC-TDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYI 202 (350)
Q Consensus 133 ~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 202 (350)
+++........... .+..++|+++++.+++++ +.++.|.+||+++++.+..+. ....+..+.++|+++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 66543222221111 267899988777677666 457899999999999988887 44557889999999876
Q ss_pred EEE-cCCcEEEEECCCcceeeeeecCCC-----CceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEE
Q 018784 203 TTA-DGSSVKFWDANHFGLVKGYNMPCN-----TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCV 276 (350)
Q Consensus 203 ~~~-~~~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l 276 (350)
+.+ .++.|.+||+.+.+....+..... ...+.+.+....++++...++.|.+||+.+++.+..+..... ..+
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~ 277 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAV 277 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceE
Confidence 554 578999999999888776665221 223566665444566666679999999999988777664332 569
Q ss_pred EEcCCCCE-EEEecCCCcEEEecCCCCC
Q 018784 277 RFSPGGES-YASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 277 ~~sp~~~~-lasgs~Dg~v~vw~~~~~~ 303 (350)
+|+|++++ +++...++.|.+||....+
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 99999985 4566679999999986544
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.3e-22 Score=190.70 Aligned_cols=266 Identities=13% Similarity=0.067 Sum_probs=185.6
Q ss_pred cCCceeEEEecccCCCccEEEEEeC-CCCeeEeeCCCCceeeeccCcc-CCeEEEEECCCCcEEEEeeC---CCeEEEee
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSA---DFTAKLWD 89 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~-d~~v~iw~~~~~~~~~~l~gH~-~~V~~v~~~~~~~~l~s~s~---Dg~v~vWd 89 (350)
+..+|++++|+| ||+.||.++. |++++||++.+++.. .+..|. ..|..++|+|+ +++++++. +...++|.
T Consensus 20 ~~~~~~~~~~~~---DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVV---DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEE---TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCC---CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 466899999997 9999999887 999999998766665 455554 68999999999 88887765 56667765
Q ss_pred CCC---CCeeeeeeccccEeEEEEcCCCC--eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 90 ALT---GDEKHSFEHKHIVRACAFSEDTH--LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 90 ~~~---~~~~~~~~h~~~V~~~~~~~~~~--~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
... +... .+.....+...+|+|+++ .+++++.++. .+||+.++... .... +.. .+++|+|++ +.++++
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~-~l~~-~~~--~~~~~spDG-~~la~~ 167 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLR-ELAR-LPG--FGFVSDIRG-DLIAGL 167 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEE-EEEE-ESS--CEEEEEEET-TEEEEE
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEE-Eeec-CCC--ceEEECCCC-CEEEEE
Confidence 433 2222 333223344667888775 3444555554 59999765322 1222 222 678888654 455555
Q ss_pred eCC----CeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc-CC--cEEEEECCCcceeeeeecCCC-CceeE--
Q 018784 165 TDS----GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-GS--SVKFWDANHFGLVKGYNMPCN-TESAS-- 234 (350)
Q Consensus 165 ~~d----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~--~i~vwd~~~~~~~~~~~~~~~-~~~~~-- 234 (350)
+.| +.|++||+.+++......+...+..++|+|||++|++++ ++ .|++||+.+.... .+..... .....
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 555 689999999888764444556789999999999888653 55 7999999887665 3222211 12233
Q ss_pred ------ecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCC---cEEEecCC
Q 018784 235 ------LEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDG---TIRIWQTN 300 (350)
Q Consensus 235 ------~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg---~v~vw~~~ 300 (350)
+.++ +.++++++.|+.+++|++ |+... .+.+.|.+++|+ +++++++++.+. .|++|+..
T Consensus 247 ~~~~~~~spd-g~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 247 AITWLGYLPD-GRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEEECTT-SCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cccceeEcCC-CcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 5654 589999999999999999 66554 344678999999 999999888774 47777764
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=3.3e-21 Score=167.66 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=157.5
Q ss_pred EEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC-CCCCCeeecCCCCcEEEEEEeC
Q 018784 77 ASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPPREVGNSSGSIRTVAWLH 155 (350)
Q Consensus 77 ~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~ 155 (350)
.+++.|++|++||+.+++......|...|.+++|+|++++|++++ ++.|.+||+.+ ..........+...+.+++|++
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 356789999999999888777778999999999999999999876 78999999986 4432222223346678889987
Q ss_pred CCCcEEEEEe--CCCe--EEEEECCCCceeEeecCCCCeEEEEEecCCcEEE-E-EcCCcEEEEECC--CcceeeeeecC
Q 018784 156 SDQTILSSCT--DSGG--VRLWDARSGKIVQTLETKSPVTSAEVSRDGRYIT-T-ADGSSVKFWDAN--HFGLVKGYNMP 227 (350)
Q Consensus 156 ~~~~~~~s~~--~dg~--i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~-~~~~~i~vwd~~--~~~~~~~~~~~ 227 (350)
++. .++.+. .++. |..|++.+++ ...+.....+..+.|+|++++++ + ..++.+++|++. +..........
T Consensus 95 dg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 95 DGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 655 444555 3344 4445555554 44555555688899999998765 3 457888898853 33322222222
Q ss_pred CCCceeEecCCCCcEEEE-ecCCCeEEEEEcc-cCeeEEeecCCCcCEEEEEEcCCCCEEEEecCC-----------CcE
Q 018784 228 CNTESASLEPKLGNIFIA-GGEDMWVHVFDFH-TGEQIGCNKGHHGPVHCVRFSPGGESYASGSED-----------GTI 294 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~l~s-g~~d~~i~v~d~~-~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~D-----------g~v 294 (350)
.....+.+.+ ++++++. +..++.+++|++. .+..+..+..|...+.+++|+|++++|+.++.+ +.|
T Consensus 173 ~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 173 GRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 2334455665 4665554 4468999999987 566677788888889999999999999888776 569
Q ss_pred EEecCCCCC
Q 018784 295 RIWQTNPPN 303 (350)
Q Consensus 295 ~vw~~~~~~ 303 (350)
++||+...+
T Consensus 252 ~~~d~~~~~ 260 (297)
T 2ojh_A 252 QLMDMDGGN 260 (297)
T ss_dssp EEEETTSCS
T ss_pred EEEecCCCC
Confidence 999986543
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=5.2e-21 Score=188.18 Aligned_cols=271 Identities=15% Similarity=0.089 Sum_probs=182.4
Q ss_pred eeccCC---ceeEEEecccCCCccEEEEEeCC---------CCeeEeeCCCCce--eeeccCccCCeEEEEECCCCcEEE
Q 018784 12 CHGHSR---PVVDLFYSPITPDGFFLVSASKD---------SSPMLRNGETGDW--IGTFEGHKGAVWSCCLDANALFSA 77 (350)
Q Consensus 12 ~~gH~~---~v~~~~~~~~s~dg~~lasgs~d---------~~v~iw~~~~~~~--~~~l~gH~~~V~~v~~~~~~~~l~ 77 (350)
+.+|.. .|..++|+| ||++||+++.+ +.+.+||+.+++. +....+|...+..++|+|||+.+|
T Consensus 53 ~~~~~~~~~~v~~~~~Sp---Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISP---DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp ECTTTTTTTTCSEEEECT---TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred eccccccccccceEEECC---CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE
Confidence 355654 489998886 99999999875 5677999998876 333455666788999999999999
Q ss_pred EeeCCCeEEEeeCCCCCeeeeee-cccc------------------EeEEEEcCCCCeEEEeeCCC--------------
Q 018784 78 SGSADFTAKLWDALTGDEKHSFE-HKHI------------------VRACAFSEDTHLLLTGGFEK-------------- 124 (350)
Q Consensus 78 s~s~Dg~v~vWd~~~~~~~~~~~-h~~~------------------V~~~~~~~~~~~l~sg~~d~-------------- 124 (350)
.++. +.|++||+.+++...... +... +.+++|+|||+.|++++.|+
T Consensus 130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 8775 899999998887655443 2222 27899999999999887553
Q ss_pred --------------------eEEEEECCCCCCCCeeecC-----CCCcEEEEEEeCCCCcEEEEEe----CCCeEEEEEC
Q 018784 125 --------------------ILRIFDLNRPDAPPREVGN-----SSGSIRTVAWLHSDQTILSSCT----DSGGVRLWDA 175 (350)
Q Consensus 125 --------------------~v~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~~----~dg~i~iwd~ 175 (350)
.|++||+.++........+ +...+..++|++++. ++++.. .+..|++||+
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEET
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeC
Confidence 7999999765532222111 256788999997655 554432 2357999999
Q ss_pred CCCceeEeecC--CCCe----EEEEEecCCcEEEE--E-cCC------cEEEEE-CCCcc--eeeeeecCC-CCce-eEe
Q 018784 176 RSGKIVQTLET--KSPV----TSAEVSRDGRYITT--A-DGS------SVKFWD-ANHFG--LVKGYNMPC-NTES-ASL 235 (350)
Q Consensus 176 ~~~~~~~~~~~--~~~v----~~~~~~~~~~~l~~--~-~~~------~i~vwd-~~~~~--~~~~~~~~~-~~~~-~~~ 235 (350)
.++++...+.. ...+ ..+.|+|||+.|+. + .++ .|.+|| ..+.. +.+.+.... .... ..+
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~ 367 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY 367 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEE
Confidence 99887655432 2222 36889999985542 3 455 477777 33333 033332211 1122 356
Q ss_pred cCCCCcEEE-EecCC--CeEEEEEcccC--eeEEeecC---CCcCEEEEEEcCCCCEEEEe
Q 018784 236 EPKLGNIFI-AGGED--MWVHVFDFHTG--EQIGCNKG---HHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 236 ~~~~~~~l~-sg~~d--~~i~v~d~~~~--~~~~~~~~---h~~~v~~l~~sp~~~~lasg 288 (350)
.++ ++.|+ ++..+ +.+++|++... .....+.. |...+..++|+|++++|+..
T Consensus 368 spd-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 368 DEK-GNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp ETT-TTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred cCC-CCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 654 66655 44444 78999998643 23344443 67778999999999987753
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.2e-20 Score=174.76 Aligned_cols=197 Identities=9% Similarity=-0.012 Sum_probs=146.4
Q ss_pred cCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC-----------ceee----eccCccCCeEEEEECCCCcEEE--
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----------DWIG----TFEGHKGAVWSCCLDANALFSA-- 77 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~-----------~~~~----~l~gH~~~V~~v~~~~~~~~l~-- 77 (350)
+...+..+++++ ++.++++++.|+ ++||+.... .... ..-.|...|.+++|++++.+|+
T Consensus 35 ~~~~~n~lavs~---~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~ 110 (434)
T 2oit_A 35 PKERSSLLAVSN---KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSAC 110 (434)
T ss_dssp CCSCCBCEEEET---TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEE
T ss_pred CCCCccEEEEec---CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEE
Confidence 445678888876 788999999888 888764211 1110 0113567799999999999999
Q ss_pred --EeeCCCeEEEeeCCCC--------Ce---eeee-eccccEeEEEEcCC-CCeEEEeeCCCeEEEEECCCCCCCCeeec
Q 018784 78 --SGSADFTAKLWDALTG--------DE---KHSF-EHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 78 --s~s~Dg~v~vWd~~~~--------~~---~~~~-~h~~~V~~~~~~~~-~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 142 (350)
+|+.|++|+|||+.+. +. ...+ .|...|.+++|+|+ +.+|++++.|++|++||+.+.... ....
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~ 189 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATL 189 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eecc
Confidence 8999999999998654 21 1222 38889999999998 889999999999999999865322 2234
Q ss_pred CCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC--------CCeEEEEEecCCcEEEEEc--CC----
Q 018784 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK--------SPVTSAEVSRDGRYITTAD--GS---- 208 (350)
Q Consensus 143 ~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~--~~---- 208 (350)
.|...+.+++|++. +.++++|+.||+|++||++ ++....+..+ ..+.++.|++++.++++.. ++
T Consensus 190 ~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 190 PSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp CGGGCEEEEEECTT-SSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred CCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 46778999999875 6677788899999999998 5555544321 2688999999998885532 22
Q ss_pred --cEEEEECCCc
Q 018784 209 --SVKFWDANHF 218 (350)
Q Consensus 209 --~i~vwd~~~~ 218 (350)
.+++||+++.
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 3999999864
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=3.3e-19 Score=160.78 Aligned_cols=267 Identities=11% Similarity=0.092 Sum_probs=176.0
Q ss_pred CccEEEEEe----CCCCeeEeeC--CCCceeeeccCccCCeEEEEECCCCcEEEEeeCC----CeEEEeeCCC--CCee-
Q 018784 30 DGFFLVSAS----KDSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALT--GDEK- 96 (350)
Q Consensus 30 dg~~lasgs----~d~~v~iw~~--~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D----g~v~vWd~~~--~~~~- 96 (350)
...++..|+ .++.|.+|.. ++++.......|......++|+|+++++++++.+ +.|.+|++.. +...
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 345566664 4567888865 5665533222266777789999999999988886 8999998765 3322
Q ss_pred -eeee-ccccEeEEEEcCCCCeEEEee-CCCeEEEEECCCCCCCCee---ec----------CCCCcEEEEEEeCCCCcE
Q 018784 97 -HSFE-HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDAPPRE---VG----------NSSGSIRTVAWLHSDQTI 160 (350)
Q Consensus 97 -~~~~-h~~~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~~~~~~~~~---~~----------~~~~~v~~~~~~~~~~~~ 160 (350)
.... +...+..+++ ++++|++++ .++.|.+|++......... .. .+...+.+++|++++..+
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 2222 3456777777 777777665 6889999998643321111 00 112345788998776667
Q ss_pred EEEEeCCCeEEEEECCCCc-------e-------eEeecCCCCeEEEEEecCCcEEEEE--cCCcEEEEECCCccee--e
Q 018784 161 LSSCTDSGGVRLWDARSGK-------I-------VQTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGLV--K 222 (350)
Q Consensus 161 ~~s~~~dg~i~iwd~~~~~-------~-------~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~vwd~~~~~~~--~ 222 (350)
++++..++.|.+|++.... . ............++|+|+|++++.+ .++.|.+||+.+.... .
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 7777778999999887543 1 2223345567889999999876544 3688999998765432 2
Q ss_pred eeecC-C---CCceeEecCCCCcEEEE-ecC-CCeEEEEEcc--cCe--eEEeecCCCcCEEEEEEcCCCCEEEEec-CC
Q 018784 223 GYNMP-C---NTESASLEPKLGNIFIA-GGE-DMWVHVFDFH--TGE--QIGCNKGHHGPVHCVRFSPGGESYASGS-ED 291 (350)
Q Consensus 223 ~~~~~-~---~~~~~~~~~~~~~~l~s-g~~-d~~i~v~d~~--~~~--~~~~~~~h~~~v~~l~~sp~~~~lasgs-~D 291 (350)
..... . ....+.+.+ ++++|++ ... ++.|.+|++. +++ .+..+.. ...+.+++|+|++++|++++ .+
T Consensus 250 ~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT
T ss_pred EEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCC
Confidence 22211 1 122455665 4666644 444 5899999995 444 3434444 45688999999999887766 67
Q ss_pred CcEEEecCC
Q 018784 292 GTIRIWQTN 300 (350)
Q Consensus 292 g~v~vw~~~ 300 (350)
+.|.+|+++
T Consensus 328 ~~v~v~~~d 336 (361)
T 3scy_A 328 NVIQIFERD 336 (361)
T ss_dssp TEEEEEEEC
T ss_pred CCEEEEEEE
Confidence 999998665
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.5e-20 Score=165.69 Aligned_cols=241 Identities=17% Similarity=0.131 Sum_probs=177.4
Q ss_pred ceeEEEecccCCCccE-EEEEeCCCCeeEeeCCCCceeeeccC-c----cCCeEEEEECCCCcEEEEee-----------
Q 018784 18 PVVDLFYSPITPDGFF-LVSASKDSSPMLRNGETGDWIGTFEG-H----KGAVWSCCLDANALFSASGS----------- 80 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~-lasgs~d~~v~iw~~~~~~~~~~l~g-H----~~~V~~v~~~~~~~~l~s~s----------- 80 (350)
.+..++|+| +|++ +++++.++.|.+||..+++.+..+.. + ...+..+++++++.++++++
T Consensus 35 ~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAP---GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECT---TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcC---CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 477888886 8865 46667788999999999998876653 2 23567889999998888775
Q ss_pred -CCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCC-CCcEEEEEEeCCCC
Q 018784 81 -ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS-SGSIRTVAWLHSDQ 158 (350)
Q Consensus 81 -~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 158 (350)
.++.|.+||+.+++....+.....+.+++|+|++++|+++ ++.|.+||+.+++......... .. .+.|++++.
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~dg~ 186 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQPDVL 186 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCCBCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCCCcc
Confidence 6899999999888777777666678899999999988887 6889999997654322111111 11 124455444
Q ss_pred cEEEEEeCCC-----------------------eEEEEECCCCceeEeec---CCCCeEEEEEecCCcEEEEEcCCcEEE
Q 018784 159 TILSSCTDSG-----------------------GVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITTADGSSVKF 212 (350)
Q Consensus 159 ~~~~s~~~dg-----------------------~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~i~v 212 (350)
.+++++..++ .|.+||+++++.. .+. ....+..++|+|++++++++ ++.|.+
T Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~ 264 (337)
T 1pby_B 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA-YNVLES 264 (337)
T ss_dssp CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE-ESEEEE
T ss_pred EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe-CCeEEE
Confidence 4444443333 4789999998764 222 23467789999999988777 689999
Q ss_pred EECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCC
Q 018784 213 WDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH 269 (350)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h 269 (350)
||+.+.+.+..+........+.+.+ +++++++++.++.|++||+.+++.+..+..+
T Consensus 265 ~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 265 FDLEKNASIKRVPLPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EECCCCcCcceecCCCceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999988877776665566677776 4677777788999999999999887766544
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=8.5e-21 Score=186.70 Aligned_cols=273 Identities=12% Similarity=0.007 Sum_probs=183.4
Q ss_pred EEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccC---CeEEEEECCCCcEEEEeeC---------CCeEEEe
Q 018784 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSA---------DFTAKLW 88 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~---~V~~v~~~~~~~~l~s~s~---------Dg~v~vW 88 (350)
.+.|+| ||.+++++ .|+++++||..+++....+.+|.. .|.+++|+|||++++.++. |+.|++|
T Consensus 20 ~~~~s~---dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWIS---GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESS---SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECC---CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 556665 99776654 699999999999998877777755 4889999999999998876 7999999
Q ss_pred eCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcE-----------------EEE
Q 018784 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI-----------------RTV 151 (350)
Q Consensus 89 d~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v-----------------~~~ 151 (350)
|+.+++..........+..++|+|||+.|+.+. ++.|++|++.++.........+...+ ..+
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 998886521112235688999999999999885 78999999976543211111222212 478
Q ss_pred EEeCCCCcEEEEEeCCC---------------------------------eEEEEECCCCcee--Eee-------cCCCC
Q 018784 152 AWLHSDQTILSSCTDSG---------------------------------GVRLWDARSGKIV--QTL-------ETKSP 189 (350)
Q Consensus 152 ~~~~~~~~~~~s~~~dg---------------------------------~i~iwd~~~~~~~--~~~-------~~~~~ 189 (350)
+|+|++..++.+..+++ +|++||+.+++.. ..+ .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 89876655554443321 7899999988653 122 13346
Q ss_pred eEEEEEecCCcEEEEEc--C---CcEEEEE----CCCcceeeeee----cCCC-Cc-----eeEecCCCCc-EEE-EecC
Q 018784 190 VTSAEVSRDGRYITTAD--G---SSVKFWD----ANHFGLVKGYN----MPCN-TE-----SASLEPKLGN-IFI-AGGE 248 (350)
Q Consensus 190 v~~~~~~~~~~~l~~~~--~---~~i~vwd----~~~~~~~~~~~----~~~~-~~-----~~~~~~~~~~-~l~-sg~~ 248 (350)
+..++|+||++++++.. + ..|.+|| +.+++...... .+.. .. ...+.++ ++ +++ ++..
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD-AISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT-SSCEEEEEECT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC-CCeEEEEEEcc
Confidence 78999999998876632 2 2488899 77765544331 2111 11 3456554 55 333 4545
Q ss_pred CC--eEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecC-----CCcEEEecCCC
Q 018784 249 DM--WVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSE-----DGTIRIWQTNP 301 (350)
Q Consensus 249 d~--~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~-----Dg~v~vw~~~~ 301 (350)
++ .|.+||+.+++ ...+..+...+..+.++ +++.++..+. ++.++||.++.
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 55 56777776665 44555566668888777 7776655444 48899998754
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=7.9e-21 Score=182.48 Aligned_cols=240 Identities=11% Similarity=0.032 Sum_probs=171.1
Q ss_pred eeeeccC-ccCCeEEEEECCCCcEEEEeeC-CCeEEEeeCCCCCeeeeeecc-ccEeEEEEcCCCCeEEEeeC---CCeE
Q 018784 53 WIGTFEG-HKGAVWSCCLDANALFSASGSA-DFTAKLWDALTGDEKHSFEHK-HIVRACAFSEDTHLLLTGGF---EKIL 126 (350)
Q Consensus 53 ~~~~l~g-H~~~V~~v~~~~~~~~l~s~s~-Dg~v~vWd~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~sg~~---d~~v 126 (350)
.++.++. +..+|+++++++||+.+|+++. ||+++||++.+++......+. ..+..++|+|+ +++++++. +...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~ 90 (582)
T 3o4h_A 12 IVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQH 90 (582)
T ss_dssp HHHHHHHHHHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCE
T ss_pred HHHHHHHHhccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcce
Confidence 3334443 3567999999999999998887 999999998666655555555 58999999999 77777765 5666
Q ss_pred EEEECCC--CCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEE
Q 018784 127 RIFDLNR--PDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT 204 (350)
Q Consensus 127 ~vwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 204 (350)
++|.+.. ..... ...... .....+|+++++.++++.+.++.+.+||+.+++......... .++.|+|||++++.
T Consensus 91 ~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~ 166 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAG 166 (582)
T ss_dssp EEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEE
T ss_pred EEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEE
Confidence 7765532 22222 222222 233557777666554444444556699999887655544433 78899999999874
Q ss_pred E-cC----CcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCC--eEEEEEcccCeeEEeecCCCcCEEEEE
Q 018784 205 A-DG----SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDM--WVHVFDFHTGEQIGCNKGHHGPVHCVR 277 (350)
Q Consensus 205 ~-~~----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~--~i~v~d~~~~~~~~~~~~h~~~v~~l~ 277 (350)
+ .+ ..|++||+.+.....-...........++| +++.|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred EEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 3 33 579999988766542222222234455665 688888888888 8999999998877 7778877777777
Q ss_pred --------EcCCCCEEEEecCCCcEEEecC
Q 018784 278 --------FSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 278 --------~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
|+|||.++++++.|+.++||++
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999988999999999999998
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.2e-20 Score=174.69 Aligned_cols=218 Identities=14% Similarity=0.122 Sum_probs=151.6
Q ss_pred CCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCC-----------C-----eeeeeecccc
Q 018784 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG-----------D-----EKHSFEHKHI 104 (350)
Q Consensus 41 ~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~-----------~-----~~~~~~h~~~ 104 (350)
+++++|+.. .. .+...+..+++++++.++++++.|+ +++|+.... . ....+.+...
T Consensus 23 ~~vri~~~~-~~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSP-EE------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCC-SS------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCc-cc------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 468888742 11 1334577889999999999999998 899864210 0 1123346677
Q ss_pred EeEEEEcCCCCeEE----EeeCCCeEEEEECCCC-----CC--C---CeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 105 VRACAFSEDTHLLL----TGGFEKILRIFDLNRP-----DA--P---PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 105 V~~~~~~~~~~~l~----sg~~d~~v~vwd~~~~-----~~--~---~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
|.+++|+|++++|+ +|+.|++|++||+.+. .. + ......|...|.+++|++.++.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 8999999999998643 11 1 122345788999999998778899999999999
Q ss_pred EEEECCCCceeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecC
Q 018784 171 RLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGE 248 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 248 (350)
++||++++..+.... +...+.+++|+|+|++|+++ .|+.|++||++ ......+..+..
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~------------------- 234 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF------------------- 234 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT-------------------
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc-------------------
Confidence 999999886654433 35678999999988766544 46777777765 222221111000
Q ss_pred CCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEE-ecCCCc------EEEecCCCC
Q 018784 249 DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYAS-GSEDGT------IRIWQTNPP 302 (350)
Q Consensus 249 d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~las-gs~Dg~------v~vw~~~~~ 302 (350)
....|...|.+++|++++.++++ .+.||. +++|++...
T Consensus 235 ----------------~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 235 ----------------YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ----------------CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ----------------cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 00124457899999999888754 444543 899998754
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.5e-19 Score=160.66 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=166.0
Q ss_pred eccCCceeEEEecccCCCccEEEEEeC---CCCeeEeeCCCCc--eeeeccCccCCeEEEEECCCCcEEEEee-CCCeEE
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASK---DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAK 86 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~---d~~v~iw~~~~~~--~~~~l~gH~~~V~~v~~~~~~~~l~s~s-~Dg~v~ 86 (350)
..|...+..++|+| ||+ |++++. ++.|.+|++.+++ .+..+..|...+..++|+|+++++++++ .+++|+
T Consensus 36 ~~~~~~p~~~a~sp---dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSA---KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EEECSCCCCEEECT---TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEE
T ss_pred eeccCCcceEEEcc---CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEE
Confidence 34556677788886 998 444443 6899999997765 4455566777888999999999888777 789999
Q ss_pred EeeCCC-CCe--eeeeecc----------ccEeEEEEcCCCCeEEEeeCCCeEEEEECCC-CCCCCe--eecCCCCcEEE
Q 018784 87 LWDALT-GDE--KHSFEHK----------HIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPPR--EVGNSSGSIRT 150 (350)
Q Consensus 87 vWd~~~-~~~--~~~~~h~----------~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~--~~~~~~~~v~~ 150 (350)
+|++.. +.. +..+.+. ..+.+++|+|+++++++...++.|.+|++.. +..... ........+..
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 999853 332 2222221 2478899999999667777789999999973 221111 11222335778
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCC--Cce--eEeecC-C------CCeEEEEEecCCcEEE-EE-cCCcEEEEECCC
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARS--GKI--VQTLET-K------SPVTSAEVSRDGRYIT-TA-DGSSVKFWDANH 217 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~--~~~--~~~~~~-~------~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~~ 217 (350)
++|++++..+++++..++.|.+|++.. ++. +..+.. . ..+..++|+|+|++|+ +. .++.|.+||+..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999877666777788889999999874 442 222221 1 3478899999999764 33 468899999873
Q ss_pred c---ceeeeeecC-CCCceeEecCCCCcEEEEec-CCCeEEEEEc--ccCeeE
Q 018784 218 F---GLVKGYNMP-CNTESASLEPKLGNIFIAGG-EDMWVHVFDF--HTGEQI 263 (350)
Q Consensus 218 ~---~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~-~d~~i~v~d~--~~~~~~ 263 (350)
. ..+..+... ..+..+.+.+ ++++|++++ .++.|.+|++ .+|+..
T Consensus 272 ~g~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFPRDFDLDP-TEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGCEEEEEEEECSSSCCCEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCcEEEeEEEecCCCCcCeEEECC-CCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2 334444332 2345666766 466555554 5689999954 456554
No 158
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=2e-19 Score=162.49 Aligned_cols=291 Identities=11% Similarity=0.104 Sum_probs=194.4
Q ss_pred CCccEEEEEe------CCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee----------CCCeEEEeeCCC
Q 018784 29 PDGFFLVSAS------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALT 92 (350)
Q Consensus 29 ~dg~~lasgs------~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s----------~Dg~v~vWd~~~ 92 (350)
++++++.... .|+++.+||..+++.+.++..+..+ .++++|++++++.+. .+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3566555543 4789999999999999888877666 889999999888875 378899999998
Q ss_pred CCeeeeee-------ccccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCee-ecCCCCcEEEEEEeCCCCcEEE
Q 018784 93 GDEKHSFE-------HKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILS 162 (350)
Q Consensus 93 ~~~~~~~~-------h~~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 162 (350)
.+....+. +...+..++|+|+|++|+++.. +++|.+||+.+.+.. .. .. .. ....+.+.+.+...++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~-~~~i~-~~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV-EDVTA-AA-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE-EEEGG-GT-TEEEEEECTTSSSEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE-EEEec-CC-CcceeEEcCCCCeeEE
Confidence 88776654 2245678999999999998864 689999999865332 22 22 11 1223455666656777
Q ss_pred EEeCCCeEEEEECCC-CceeEee------cCCCCeEEEEEecCCcE-EEEEcCCcEEEEECCCcc--eeeeeec------
Q 018784 163 SCTDSGGVRLWDARS-GKIVQTL------ETKSPVTSAEVSRDGRY-ITTADGSSVKFWDANHFG--LVKGYNM------ 226 (350)
Q Consensus 163 s~~~dg~i~iwd~~~-~~~~~~~------~~~~~v~~~~~~~~~~~-l~~~~~~~i~vwd~~~~~--~~~~~~~------ 226 (350)
+.+.||++.+|+... ++..... ........+.+.+++.. +..+.++.+.++|+.... .+..+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 888899999999865 5544221 11111112233555543 445567789999986432 1222211
Q ss_pred -----CCCCceeEecCCCCcEEEEec----------CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCC
Q 018784 227 -----PCNTESASLEPKLGNIFIAGG----------EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSED 291 (350)
Q Consensus 227 -----~~~~~~~~~~~~~~~~l~sg~----------~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~D 291 (350)
+.......+.+..+.++++.. ..+.|.+||+.+++.+.++..+. +++++|+|+|++|++++.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~- 324 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG- 324 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-
Confidence 111122455665455555543 13589999999999999988777 999999999999988887
Q ss_pred CcEEEecCCCCCcccCCCCCCCccccccccccccceeeeeeEEEcccch
Q 018784 292 GTIRIWQTNPPNHEENHSGTGNAQTGKLKASTDEVTRKIEGFHINKEGK 340 (350)
Q Consensus 292 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~ 340 (350)
+.|.+||..+..+ ++......+...-.++.++|||+
T Consensus 325 ~~v~v~D~~t~~l-------------~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 GNVNVYDISQPEP-------------KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEECSSSSC-------------EEEEEETTSCSSEEEEEECCCSC
T ss_pred CeEEEEECCCCcc-------------eeeEEeccCCCCcEEEEecCCCC
Confidence 9999999865411 11111122233346778889886
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=3.3e-18 Score=154.19 Aligned_cols=259 Identities=13% Similarity=0.108 Sum_probs=171.0
Q ss_pred cCCceeEEEecccCCCccEEEEEeCC----CCeeEeeCCC--Cce--eeeccCccCCeEEEEECCCCcEEEEee-CCCeE
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASKD----SSPMLRNGET--GDW--IGTFEGHKGAVWSCCLDANALFSASGS-ADFTA 85 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~d----~~v~iw~~~~--~~~--~~~l~gH~~~V~~v~~~~~~~~l~s~s-~Dg~v 85 (350)
|...+..++|+| ||++|++++.+ +.+.+|+... ++. +..+..+......+++ ++.++++++ .+++|
T Consensus 48 ~~~~p~~l~~sp---dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSA---DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECT---TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECC---CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 666777788876 99999999886 7899998654 443 3344445556667777 676655554 68999
Q ss_pred EEeeCCCCCeee----eeec-----------cccEeEEEEcCCCCeEEEee-CCCeEEEEECCCCCC----C-C------
Q 018784 86 KLWDALTGDEKH----SFEH-----------KHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDA----P-P------ 138 (350)
Q Consensus 86 ~vWd~~~~~~~~----~~~h-----------~~~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~~~~~----~-~------ 138 (350)
.+|++.....+. ...+ ...+.+++|+|++++|++++ .++.|++|++..... . .
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 999986443221 1111 22357899999999766554 589999999875442 1 1
Q ss_pred -eeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce--eEeecC----CCCeEEEEEecCCcEEEEE-cC--C
Q 018784 139 -REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLET----KSPVTSAEVSRDGRYITTA-DG--S 208 (350)
Q Consensus 139 -~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~l~~~-~~--~ 208 (350)
.........+..++|++++..+++++..+++|.+||+.+++. +..+.. ......++|+|+|++|+++ .+ +
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 112334456788999876666667766789999999987754 232322 2346789999999987544 33 6
Q ss_pred cEEEEECC--Ccc--eeeeeecCCCCceeEecCCCCcEEEEec-CCCeEEEEEc--ccCeeEEee-cCCCcCEEEEEEc
Q 018784 209 SVKFWDAN--HFG--LVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFDF--HTGEQIGCN-KGHHGPVHCVRFS 279 (350)
Q Consensus 209 ~i~vwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d~~i~v~d~--~~~~~~~~~-~~h~~~v~~l~~s 279 (350)
.|.+|++. +.. .+..+.....+..+.+.+ ++++|++++ .++.|.+|++ .+++..... ..+...+.|+.|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 89999985 333 333333323445566766 466555555 6789999655 466655443 2345578899886
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=3.9e-19 Score=161.57 Aligned_cols=271 Identities=15% Similarity=0.071 Sum_probs=181.6
Q ss_pred cCCCccEEEEEeC-CCC--eeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeec-c
Q 018784 27 ITPDGFFLVSASK-DSS--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH-K 102 (350)
Q Consensus 27 ~s~dg~~lasgs~-d~~--v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h-~ 102 (350)
++|||+.||.++. ++. +.+||+.+++......+|...+..++|+|+++.|+.++.++.|++||+.+++....+.. .
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~ 122 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPA 122 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechh
Confidence 4569999998887 674 77789999988877777877766778999999999999999999999999887665543 3
Q ss_pred ccEeEE--EEcCCCCeEEE----------------------eeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeC-CC
Q 018784 103 HIVRAC--AFSEDTHLLLT----------------------GGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLH-SD 157 (350)
Q Consensus 103 ~~V~~~--~~~~~~~~l~s----------------------g~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 157 (350)
..+... .++|++.+++. ...+..|.+||+.+++. .....+...+..+.|+| ++
T Consensus 123 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 123 EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES--TVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEE
T ss_pred hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce--EEeecCCccccccEECCCCC
Confidence 334333 34899998874 23457899999986542 33334456688899998 55
Q ss_pred CcEEEEEeC-----CCeEEEEECCCCceeEeecCC--CCeEEEEEecCCcEEE-EEc--CC---cEEEEECCCcceeeee
Q 018784 158 QTILSSCTD-----SGGVRLWDARSGKIVQTLETK--SPVTSAEVSRDGRYIT-TAD--GS---SVKFWDANHFGLVKGY 224 (350)
Q Consensus 158 ~~~~~s~~~-----dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~-~~~--~~---~i~vwd~~~~~~~~~~ 224 (350)
..++.+... ...|.++|+..++........ ..+....|+|||+.|+ .+. +. .|.+||+.+.+.....
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE
Confidence 545444332 237888888765543333333 2477789999998653 332 22 3999999887643322
Q ss_pred ecCCC------CceeEecCCCCcEEEEe---------cCCCeEEEEEcccCeeEEeecCCCc-----------CEEEEEE
Q 018784 225 NMPCN------TESASLEPKLGNIFIAG---------GEDMWVHVFDFHTGEQIGCNKGHHG-----------PVHCVRF 278 (350)
Q Consensus 225 ~~~~~------~~~~~~~~~~~~~l~sg---------~~d~~i~v~d~~~~~~~~~~~~h~~-----------~v~~l~~ 278 (350)
..+.. .....+.+ +++.|+.. ..+..|++||+.+++.. .+..|.. .+.+++|
T Consensus 281 ~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~ 358 (388)
T 3pe7_A 281 SMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSF 358 (388)
T ss_dssp EECCEEEEEECTTSSEEEE-EECCC------------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEE
T ss_pred cCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccC
Confidence 22210 11123444 34444432 45678999999887653 4444544 5788999
Q ss_pred cCCCCEEEEec-CCCcEEEecCCC
Q 018784 279 SPGGESYASGS-EDGTIRIWQTNP 301 (350)
Q Consensus 279 sp~~~~lasgs-~Dg~v~vw~~~~ 301 (350)
+|||+.|+..+ .++...||.++.
T Consensus 359 spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 359 TPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CCCCCEEEEEecCCCceeEEEEEC
Confidence 99998877544 578888886643
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=1.3e-17 Score=148.72 Aligned_cols=246 Identities=11% Similarity=0.137 Sum_probs=185.9
Q ss_pred CCceeEEEecccCCCccEEEEEeCC------------------------CCeeEeeCCCCceeeecc-CccCCeEEEEEC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKD------------------------SSPMLRNGETGDWIGTFE-GHKGAVWSCCLD 70 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d------------------------~~v~iw~~~~~~~~~~l~-gH~~~V~~v~~~ 70 (350)
.+.+.+|+|+| +|+++++.+.+ ++|.+||..+++.+..+. ++-.....++++
T Consensus 23 l~~v~~va~d~---~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDS---KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECT---TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECC---CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 45789999986 89999998887 479999999999887665 555678899999
Q ss_pred CCCcEEEEeeCCCeEEEeeCCCCC-eeeeee----------ccccEeEEEEcC-CCCeEEEee-CCCeEEEEECCCCCCC
Q 018784 71 ANALFSASGSADFTAKLWDALTGD-EKHSFE----------HKHIVRACAFSE-DTHLLLTGG-FEKILRIFDLNRPDAP 137 (350)
Q Consensus 71 ~~~~~l~s~s~Dg~v~vWd~~~~~-~~~~~~----------h~~~V~~~~~~~-~~~~l~sg~-~d~~v~vwd~~~~~~~ 137 (350)
+++.++++...++.|++||..... .+..+. +-..+..++++| ++.++++.+ .++.|++|+.. +...
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~ 178 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFV 178 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEE
Confidence 999999999999999999975442 334332 223588999999 788888876 69999999953 2221
Q ss_pred CeeecC----------CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC---CCCeEEEEEecCCcEEEE
Q 018784 138 PREVGN----------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITT 204 (350)
Q Consensus 138 ~~~~~~----------~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~ 204 (350)
..... .......+++.+..+.++++...++.|++||..+++.+..+.. ...+..++++| +..+..
T Consensus 179 -~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 179 -TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp -EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred -EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 11111 1234788998876688888888899999999998988877743 34567788888 433322
Q ss_pred EcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEee---cCCCcCEEEEEEcCC
Q 018784 205 ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCN---KGHHGPVHCVRFSPG 281 (350)
Q Consensus 205 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~---~~h~~~v~~l~~sp~ 281 (350)
. ++.+++...+..|++||+.+++.+..+ .++...+..|+++|+
T Consensus 257 ~----------------------------------g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 257 N----------------------------------GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp E----------------------------------CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred C----------------------------------CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 1 223333445667888998888887776 367778999999999
Q ss_pred CCEEEEecCCCcEEEecCCC
Q 018784 282 GESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 282 ~~~lasgs~Dg~v~vw~~~~ 301 (350)
|.++++...+++|++|++..
T Consensus 303 G~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 303 GTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SEEEEEESSSCCEEEEEEEE
T ss_pred CCEEEEECCCCEEEEEeCCc
Confidence 98899999999999998753
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=1.7e-18 Score=156.66 Aligned_cols=267 Identities=13% Similarity=0.133 Sum_probs=173.2
Q ss_pred EEEEeCC--CCeeEee--CCCCceee--ecc-CccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC-CCCeeeeeecc--c
Q 018784 34 LVSASKD--SSPMLRN--GETGDWIG--TFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDAL-TGDEKHSFEHK--H 103 (350)
Q Consensus 34 lasgs~d--~~v~iw~--~~~~~~~~--~l~-gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~-~~~~~~~~~h~--~ 103 (350)
|..|+.. +.|.+|+ .+++++.. ... ++...+..++++|+++++++++.+ .|.+|++. +++......+. +
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4445542 4566654 45665432 221 233456789999999999988888 99999986 66544333322 3
Q ss_pred cEeEEEEcCCCCe--EEEee-------------CCCeEEEEECCCCCCCCeeec----CCCCcEEEEEEeCCCCcEEEEE
Q 018784 104 IVRACAFSEDTHL--LLTGG-------------FEKILRIFDLNRPDAPPREVG----NSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 104 ~V~~~~~~~~~~~--l~sg~-------------~d~~v~vwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
.+..++|+|++++ ++++. .++++.+|++........... .+...+..++|+++++.++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3566899999994 55653 689999999963222211111 2456788999987666565555
Q ss_pred eCCCeEEEEECC-CCcee--Eeec---CCCCeEEEEEecCCcEEEEEc--CCcEEEEECC--Cccee---eeee-cCC--
Q 018784 165 TDSGGVRLWDAR-SGKIV--QTLE---TKSPVTSAEVSRDGRYITTAD--GSSVKFWDAN--HFGLV---KGYN-MPC-- 228 (350)
Q Consensus 165 ~~dg~i~iwd~~-~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~--~~~~~---~~~~-~~~-- 228 (350)
..++.|++||+. +++.. ..+. +...+..++|+|+|++++.+. ++.|.+|+.. ++... ..+. .+.
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 556899999998 67643 3333 145688999999998876543 5789999764 34332 1121 111
Q ss_pred -----------CCceeE-ecCCCCcEEEEecC-CC-----eEEEEEcc-cCeeEE---eecCCCcCEEEEEEcC---CCC
Q 018784 229 -----------NTESAS-LEPKLGNIFIAGGE-DM-----WVHVFDFH-TGEQIG---CNKGHHGPVHCVRFSP---GGE 283 (350)
Q Consensus 229 -----------~~~~~~-~~~~~~~~l~sg~~-d~-----~i~v~d~~-~~~~~~---~~~~h~~~v~~l~~sp---~~~ 283 (350)
....+. +.+ ++++|+++.. ++ .|.+|++. +++... ....+...+..++|+| +|+
T Consensus 244 ~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred CCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC
Confidence 123445 555 5666655543 23 89999996 566443 2333555567899999 899
Q ss_pred EEEEecCC-CcEEEecCCCC
Q 018784 284 SYASGSED-GTIRIWQTNPP 302 (350)
Q Consensus 284 ~lasgs~D-g~v~vw~~~~~ 302 (350)
+|++++.+ +.|.+|+++..
T Consensus 323 ~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 323 WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEECSSSCEEEEEEEETT
T ss_pred EEEEEEcCCCeEEEEEEchh
Confidence 99988865 89999988643
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=5e-19 Score=174.06 Aligned_cols=276 Identities=11% Similarity=0.051 Sum_probs=183.1
Q ss_pred ceeEEEecccCCCccEEEEEeC---------CCCeeEeeCCCCcee--eeccCccCCeEEEEECCCCcEEEEeeCCCeEE
Q 018784 18 PVVDLFYSPITPDGFFLVSASK---------DSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~---------d~~v~iw~~~~~~~~--~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~ 86 (350)
.+.+++||| ||++||.++. |+++++||+.+++.+ ..+. ..+..++|+|||+.+|.++ |+.|+
T Consensus 61 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSP---DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp TCSEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred ceeeEEECC---CCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCEEEEEE-CCeEE
Confidence 388888886 9999999887 789999999998873 2332 5688899999999998875 88999
Q ss_pred EeeCCCCCeeeee--eccccE-----------------eEEEEcCCCCeEEEeeCCC-----------------------
Q 018784 87 LWDALTGDEKHSF--EHKHIV-----------------RACAFSEDTHLLLTGGFEK----------------------- 124 (350)
Q Consensus 87 vWd~~~~~~~~~~--~h~~~V-----------------~~~~~~~~~~~l~sg~~d~----------------------- 124 (350)
+||+.+++..... .+...| .+++|+|||+.|+.++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 9999887654432 122222 4899999999999987652
Q ss_pred -----------eEEEEECCCCCCC----C---eeecCCCCcEEEEEEeCCCCcEEEEEeCC----CeEEEEE----CCCC
Q 018784 125 -----------ILRIFDLNRPDAP----P---REVGNSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWD----ARSG 178 (350)
Q Consensus 125 -----------~v~vwd~~~~~~~----~---~~~~~~~~~v~~~~~~~~~~~~~~s~~~d----g~i~iwd----~~~~ 178 (350)
.|++||+.++... . .....+...+..++|+++ +.++++.... ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889999764321 0 112246677899999986 5666664322 2488899 8887
Q ss_pred ceeEeec-----CCCCeE-----EEEEecCCcEEE--EE-cCC--cEEEEECCCcceeeeeecCCC-CceeEecCCCCcE
Q 018784 179 KIVQTLE-----TKSPVT-----SAEVSRDGRYIT--TA-DGS--SVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNI 242 (350)
Q Consensus 179 ~~~~~~~-----~~~~v~-----~~~~~~~~~~l~--~~-~~~--~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 242 (350)
++...+. +...+. .+.|+|||+.++ ++ .++ .|.+||+.+... +.+..... .....+. +.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~~~~~~-d~~~i 370 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWEAINIFRV-TQDSL 370 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSCEEEEEEE-CSSEE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceEEEEEEEE-eCCEE
Confidence 6654441 223344 678999998543 33 333 577888766542 22222111 1222333 33344
Q ss_pred EEEecC----CCeEEEEEccc--Ce-eEEeec----CCCcCEEEEEEcCCCCEEE-EecCC--CcEEEecCCCCC
Q 018784 243 FIAGGE----DMWVHVFDFHT--GE-QIGCNK----GHHGPVHCVRFSPGGESYA-SGSED--GTIRIWQTNPPN 303 (350)
Q Consensus 243 l~sg~~----d~~i~v~d~~~--~~-~~~~~~----~h~~~v~~l~~sp~~~~la-sgs~D--g~v~vw~~~~~~ 303 (350)
++++.. ++.+++|.+.. +. ....+. +|...+..+.|+|++++++ +++.+ ..+.+|++...+
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 455544 47888988764 42 123333 3667789999999988766 44443 468899876544
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=5.8e-17 Score=141.16 Aligned_cols=235 Identities=12% Similarity=0.165 Sum_probs=166.0
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeecc------CccCCeEEEEE-CCCCcEEEEeeC-CCeE
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE------GHKGAVWSCCL-DANALFSASGSA-DFTA 85 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~------gH~~~V~~v~~-~~~~~~l~s~s~-Dg~v 85 (350)
||...+.++++++ +|.++++.+.++.|.+|+.. ++.+..+. +|...+..+++ .+++.++++... ++.|
T Consensus 27 g~~~~p~~v~~~~---~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNA---QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECT---TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECC---CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 5667888998886 89999998999999999976 66666553 35567889999 578888877644 8999
Q ss_pred EEeeCCCCCeeeeee--ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec--CCCCcEEEEEEeCCCCcEE
Q 018784 86 KLWDALTGDEKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG--NSSGSIRTVAWLHSDQTIL 161 (350)
Q Consensus 86 ~vWd~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 161 (350)
++|| .+++....+. +...+..+++.|+++++++...++.|.+||... .. ..... .+...+..+++.+ ++.++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~-~~~~~~~~~~~~p~~i~~~~-~g~l~ 178 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NV-LHKFGCSKHLEFPNGVVVND-KQEIF 178 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE-EEEEECTTTCSSEEEEEECS-SSEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CE-EEEeCCCCccCCcEEEEECC-CCCEE
Confidence 9999 4566555553 335689999999999888888889999999652 21 12222 2344678888876 45677
Q ss_pred EEEeCCCeEEEEECCCCceeEeecCC---CCeEEEEEecCCcEEEEEc-CC-cEEEEECCCcceeeeeecCCCCceeEec
Q 018784 162 SSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTAD-GS-SVKFWDANHFGLVKGYNMPCNTESASLE 236 (350)
Q Consensus 162 ~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-~~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
++...++.|++||. +++.+..+... ..+..++++++|+++++.. ++ .|.+||..
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-------------------- 237 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-------------------- 237 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--------------------
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--------------------
Confidence 77777899999997 45555555432 4566777777777666553 22 56666532
Q ss_pred CCCCcEEEEecCCCeEEEEEcccCeeEEeecC--CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 237 PKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 237 ~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~--h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
++.+..+.. ....+.+++++|+|+++++ +.|++|++|++..
T Consensus 238 -----------------------g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 238 -----------------------GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -----------------------SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -----------------------CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 222222211 1234788999999988877 5799999998754
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=5.9e-18 Score=167.07 Aligned_cols=275 Identities=10% Similarity=0.002 Sum_probs=176.8
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCe-----EEEEECCCCcEEEEeeCC--------
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV-----WSCCLDANALFSASGSAD-------- 82 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V-----~~v~~~~~~~~l~s~s~D-------- 82 (350)
......+.|+| ||.+++++ |++|++||..+++....+.+|.... ..+.|+||+++++.++.+
T Consensus 16 ~~~~~~~~w~~---dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWIS---DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECS---SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccccEECC---CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 33456777775 99999986 9999999999999888888887542 336889999999988887
Q ss_pred -CeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcE-------------
Q 018784 83 -FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI------------- 148 (350)
Q Consensus 83 -g~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v------------- 148 (350)
+.+.+||+.+++......|...+...+|+|||+.||.+ .|+.|.+|++.++.........+...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred ceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 55679999998766555677889999999999999887 478999999876543211111122212
Q ss_pred ----EEEEEeCCCCcEEEEEeCCC-----------------------------------eEEEEECCC---Cc--eeEee
Q 018784 149 ----RTVAWLHSDQTILSSCTDSG-----------------------------------GVRLWDARS---GK--IVQTL 184 (350)
Q Consensus 149 ----~~~~~~~~~~~~~~s~~~dg-----------------------------------~i~iwd~~~---~~--~~~~~ 184 (350)
..+.|+|++..++....++. +|++||+.+ ++ ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 34788876665554432222 588899988 73 22233
Q ss_pred c-------CCCCeEEEEEecCCcEEEEE--c---CCcEEEEECCCcc----eee--ee--ecCCC------CceeEecCC
Q 018784 185 E-------TKSPVTSAEVSRDGRYITTA--D---GSSVKFWDANHFG----LVK--GY--NMPCN------TESASLEPK 238 (350)
Q Consensus 185 ~-------~~~~v~~~~~~~~~~~l~~~--~---~~~i~vwd~~~~~----~~~--~~--~~~~~------~~~~~~~~~ 238 (350)
. ....+..+.|+|||++++.. . +..|++||+.++. +.. .+ ..... .....+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp- 328 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL- 328 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT-
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC-
Confidence 2 33457889999999966543 2 2369999988765 221 11 11111 12345555
Q ss_pred CCcEEE-Eec-CCC--eEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCE-EEEecC----CCcEEEecC
Q 018784 239 LGNIFI-AGG-EDM--WVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGES-YASGSE----DGTIRIWQT 299 (350)
Q Consensus 239 ~~~~l~-sg~-~d~--~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~-lasgs~----Dg~v~vw~~ 299 (350)
+++.++ ..+ .+| .|++||+.+++... +......|..+.. ++++. +++++. .+...||.+
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 466544 444 344 58888887765543 3333444555432 33544 455554 244555543
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.4e-17 Score=150.54 Aligned_cols=241 Identities=10% Similarity=0.100 Sum_probs=162.1
Q ss_pred cCCceeEEEecccCCCccEEEEEeCCCCeeEeeCC-CCceeeeccCcc--CCeEEEEECCCCc--EEEEee---------
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE-TGDWIGTFEGHK--GAVWSCCLDANAL--FSASGS--------- 80 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~-~~~~~~~l~gH~--~~V~~v~~~~~~~--~l~s~s--------- 80 (350)
+...+..++|+| ||++|++++.+ ++.+|++. ++++..... |. +....++++|+++ ++++++
T Consensus 38 ~~~~~~~~a~sp---dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDH---ERKNIYGAAMK-KWSSFAVKSPTEIVHEAS-HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECT---TSSEEEEEEBT-EEEEEEEEETTEEEEEEE-EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECC---CCCEEEEEccc-eEEEEEECCCCCEEEeeE-eecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 344677888876 99999999888 99999987 777654322 11 2344578999998 455664
Q ss_pred ----CCCeEEEeeCC-CCCeeeeee-----ccccEeEEEEcCCCCeEEEee-CCCeEEEEECC-CCCCCC-eeec--CCC
Q 018784 81 ----ADFTAKLWDAL-TGDEKHSFE-----HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLN-RPDAPP-REVG--NSS 145 (350)
Q Consensus 81 ----~Dg~v~vWd~~-~~~~~~~~~-----h~~~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~-~~~~~~-~~~~--~~~ 145 (350)
.++++++|++. .++....+. +...+.+++|+|+|++|+++. .++.|++|++. +++... .... .+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 69999999986 355433322 456789999999999888765 46899999997 443221 1111 134
Q ss_pred CcEEEEEEeCCCCcEEEEEeCCCeEEEEECC--CCcee---Eeec---CC----C-------CeEEEE-EecCCcEEEEE
Q 018784 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDAR--SGKIV---QTLE---TK----S-------PVTSAE-VSRDGRYITTA 205 (350)
Q Consensus 146 ~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~--~~~~~---~~~~---~~----~-------~v~~~~-~~~~~~~l~~~ 205 (350)
..+..++|+++++.+++++..+++|.+|++. +++.. ..+. .. . .+..++ |+|||++|+++
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 5688999987666666666667899999765 56542 1221 11 2 478899 99999987654
Q ss_pred c--CC-----cEEEEECC-Ccceeee---ee-cCCCCceeEecCC--CCcEEEEecC-CCeEEEEEcccC
Q 018784 206 D--GS-----SVKFWDAN-HFGLVKG---YN-MPCNTESASLEPK--LGNIFIAGGE-DMWVHVFDFHTG 260 (350)
Q Consensus 206 ~--~~-----~i~vwd~~-~~~~~~~---~~-~~~~~~~~~~~~~--~~~~l~sg~~-d~~i~v~d~~~~ 260 (350)
+ .. .|.+|++. ++..... .. .......+.+.|. ++++|++++. ++.|.+|++...
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 3 23 79999986 4443321 21 1223445556664 5777877776 489999998765
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=5.8e-18 Score=153.96 Aligned_cols=274 Identities=13% Similarity=0.059 Sum_probs=175.4
Q ss_pred ceeEEEecccCCCccEEEEEeCC-C--CeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC
Q 018784 18 PVVDLFYSPITPDGFFLVSASKD-S--SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d-~--~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~ 94 (350)
.+..++|+ |||++|+..+.+ + .+.+|+..+++......++......+.|+|+++.|+.++.++.|.+||+.+++
T Consensus 37 ~~~~~~~S---pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFT---QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CTTSCCBC---TTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eeecCcCC---CCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 36666666 499988776543 3 57778988887655444443333346899999999999999999999998887
Q ss_pred eeeeee-ccccEeE-------------------EEEcCCCCeEEEe-----eCCCeEEEEECCCCCCCCeeecCCCCcEE
Q 018784 95 EKHSFE-HKHIVRA-------------------CAFSEDTHLLLTG-----GFEKILRIFDLNRPDAPPREVGNSSGSIR 149 (350)
Q Consensus 95 ~~~~~~-h~~~V~~-------------------~~~~~~~~~l~sg-----~~d~~v~vwd~~~~~~~~~~~~~~~~~v~ 149 (350)
...... +...... +.++|+++.++.. ..+..|.+||+.++.. .....+...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~ 191 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLG 191 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESSCEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE--EeeccCCcccc
Confidence 655444 2222222 3467888776654 4567899999976543 22223456688
Q ss_pred EEEEeC-CCCcEEEEEeCC-----CeEEEEECCCCceeEeecC--CCCeEEEEEecCCcEEEEE-cC-----CcEEEEEC
Q 018784 150 TVAWLH-SDQTILSSCTDS-----GGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITTA-DG-----SSVKFWDA 215 (350)
Q Consensus 150 ~~~~~~-~~~~~~~s~~~d-----g~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~~-----~~i~vwd~ 215 (350)
.+.|++ ++..+++..... ..|.+||+..++....... ...+..+.|+|+|++|+.. .+ +.|.+||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEEC
Confidence 899988 344444443221 3688999876654332222 1247778999999865433 22 34999999
Q ss_pred CCcceeeeeecCCCCceeEecCCCCcEEEEec----------------CCCeEEEEEcccCeeEEeecCCCc--------
Q 018784 216 NHFGLVKGYNMPCNTESASLEPKLGNIFIAGG----------------EDMWVHVFDFHTGEQIGCNKGHHG-------- 271 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~----------------~d~~i~v~d~~~~~~~~~~~~h~~-------- 271 (350)
.+.........+.. ...+.+.+++++++++ .+..|++||+.+++.. .+..+..
T Consensus 272 ~~g~~~~l~~~~~~--~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~ 348 (396)
T 3c5m_A 272 ETLENEEVMVMPPC--SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGD 348 (396)
T ss_dssp TTCCEEEEEECCSE--EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTB
T ss_pred CCCCeEEeeeCCCC--CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcccccccc
Confidence 87654433333321 2555553577777654 3478999999877643 3333433
Q ss_pred ---CEEEEEEcCCCCEEEEecC-CCcEEEecC
Q 018784 272 ---PVHCVRFSPGGESYASGSE-DGTIRIWQT 299 (350)
Q Consensus 272 ---~v~~l~~sp~~~~lasgs~-Dg~v~vw~~ 299 (350)
.+..++|+|+|+.|+..+. ++...||.+
T Consensus 349 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 349 RQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp SSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 2567889999998876654 566566654
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=3e-17 Score=146.45 Aligned_cols=243 Identities=14% Similarity=0.049 Sum_probs=159.4
Q ss_pred ceeEEEecccCCCccEE-EEEeCCCCeeEeeCCCCceeeeccC-c-----cCCeEEEEECCCCcEEEEeeCC--------
Q 018784 18 PVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEG-H-----KGAVWSCCLDANALFSASGSAD-------- 82 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~l-asgs~d~~v~iw~~~~~~~~~~l~g-H-----~~~V~~v~~~~~~~~l~s~s~D-------- 82 (350)
.+..++|+| +|+++ ++++.++.|.+||..+++.+..+.. + ...+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~---dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAP---DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECT---TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECC---CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 567788875 88754 5666789999999999988877653 2 2336788999999999988866
Q ss_pred ----CeEEEeeCCCCC---eeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCC----------
Q 018784 83 ----FTAKLWDALTGD---EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS---------- 145 (350)
Q Consensus 83 ----g~v~vWd~~~~~---~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~---------- 145 (350)
+.|.+||+.+++ ....+.+...+.+++|+|+++ +++++.+ |.+||+.+++..........
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccccccccCCccccCccc
Confidence 999999998743 334455666789999999999 5555444 99999876543221111110
Q ss_pred ----------C---cEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeE--eecCCCCeEEEEEec-CCcEEEEEcCCc
Q 018784 146 ----------G---SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQ--TLETKSPVTSAEVSR-DGRYITTADGSS 209 (350)
Q Consensus 146 ----------~---~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~~~ 209 (350)
. ....+++.+++............+..+|..+++... .-.....+..++++| ++++++++ ++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~ 276 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNR 276 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESE
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCe
Confidence 0 223344432211000000000112224444443211 011334677899999 99988877 889
Q ss_pred EEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC
Q 018784 210 VKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG 268 (350)
Q Consensus 210 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~ 268 (350)
|.+||+.+.+.++.+........+.+.+. +++|++++.++.|++||+.+++.+..+..
T Consensus 277 v~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 277 LAKYDLKQRKLIKAANLDHTYYCVAFDKK-GDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEECSS-SSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECccCeEEEEEcCCCCccceEECCC-CCEEEEecCCCeEEEEeccccceeeeeec
Confidence 99999999888777766555666677764 56666678889999999999888766643
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=4.4e-17 Score=158.67 Aligned_cols=286 Identities=11% Similarity=-0.027 Sum_probs=187.0
Q ss_pred eeccCCceeEEEecccCCCccEEEEE--eCCCCeeEeeCCCCceeeeccCccCCeE---------EEEEC--CCCcE-EE
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSA--SKDSSPMLRNGETGDWIGTFEGHKGAVW---------SCCLD--ANALF-SA 77 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasg--s~d~~v~iw~~~~~~~~~~l~gH~~~V~---------~v~~~--~~~~~-l~ 77 (350)
+.+|...+..++|++ ++.++++. +.++...||....+.....+..|...+. ...++ ||++. ++
T Consensus 19 ~~~~~~~~~~~~~s~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 19 VASRSGRPACVGAVG---DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHTCSCCEEEEEET---TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HhhcCCccceeEEcC---CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 358999999999985 77777777 5688899998544455567777776665 55554 89887 65
Q ss_pred Eee-CCCeEEEeeCC--C-CCeeeeee-----ccccEeEEEEcCCCCeEEEeeCC----------CeEEEEECCCCC---
Q 018784 78 SGS-ADFTAKLWDAL--T-GDEKHSFE-----HKHIVRACAFSEDTHLLLTGGFE----------KILRIFDLNRPD--- 135 (350)
Q Consensus 78 s~s-~Dg~v~vWd~~--~-~~~~~~~~-----h~~~V~~~~~~~~~~~l~sg~~d----------~~v~vwd~~~~~--- 135 (350)
.++ .+..|.+|++. . +....... |...+..++|+|||+.|+.++.+ ..|.+||+....
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 443 36677777765 3 44333333 56678999999999999988877 589999997621
Q ss_pred -CCCeeec-CCCCcEEEEEEeCCCCcEEEEEeCC-------CeEEEEECC-CC---ceeEeecC-CCCeEEEEEecCCcE
Q 018784 136 -APPREVG-NSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDAR-SG---KIVQTLET-KSPVTSAEVSRDGRY 201 (350)
Q Consensus 136 -~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~~~d-------g~i~iwd~~-~~---~~~~~~~~-~~~v~~~~~~~~~~~ 201 (350)
.....+. .+...+..++|+++++.++.+..+. ..|++||+. ++ +....... ...+..+.|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 1223333 4456677788987666555554332 479999998 56 43333333 467889999999997
Q ss_pred EEEEc-CC--cEEEEECCCcceeeeeecCCC---------CceeEecCCCCcEEEEecCCCeEEEE--EcccCeeEEeec
Q 018784 202 ITTAD-GS--SVKFWDANHFGLVKGYNMPCN---------TESASLEPKLGNIFIAGGEDMWVHVF--DFHTGEQIGCNK 267 (350)
Q Consensus 202 l~~~~-~~--~i~vwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~sg~~d~~i~v~--d~~~~~~~~~~~ 267 (350)
+++++ ++ .|.+||+.+............ .....+.+ ++.++++++. +.++|| |+.+++ +..+.
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 76664 45 577777755544322221111 11233333 5788888888 999999 444454 66777
Q ss_pred CCCcCEEEE-EEcCCCCEEEEecCCCcEEE--ecCCCCC
Q 018784 268 GHHGPVHCV-RFSPGGESYASGSEDGTIRI--WQTNPPN 303 (350)
Q Consensus 268 ~h~~~v~~l-~~sp~~~~lasgs~Dg~v~v--w~~~~~~ 303 (350)
.|...+..+ ++.++.-++++++.+....+ |++...+
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 887778877 55544444556666655444 4544443
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=1.3e-16 Score=142.02 Aligned_cols=266 Identities=15% Similarity=0.061 Sum_probs=182.8
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCee
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~ 96 (350)
..|.+++|++ ++..++..+.+++++.| .++....+.++...+.+++|++++.+++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSG---KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCG---GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecC---CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 3577887876 66677777889999999 44566677777778899999999999889889999999999887765
Q ss_pred eee-eccccEeEEEEcCCCCeEEEeeCC----CeEEEEECCCCCCCCeee-cCCCCcEEEEEEeCCCCcEEEEEeC----
Q 018784 97 HSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTD---- 166 (350)
Q Consensus 97 ~~~-~h~~~V~~~~~~~~~~~l~sg~~d----~~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~~---- 166 (350)
... .+...+.+++++|+++++++...+ +.|.+||........... ......+..+++.+. +.++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYST 158 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTT
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEecccccc
Confidence 544 456789999999999988877666 689999987544321111 123456888888764 556665543
Q ss_pred --CCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEE-EEE-cCCcEEEEECCC-cceeee------eecCC--CCcee
Q 018784 167 --SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH-FGLVKG------YNMPC--NTESA 233 (350)
Q Consensus 167 --dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~-~~~~i~vwd~~~-~~~~~~------~~~~~--~~~~~ 233 (350)
.+.|..+|..+++.............++++|+++.+ ++. .++.|.+||..+ ...... ..... .+..+
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i 238 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSC 238 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCce
Confidence 356777777665544333333457889999999754 343 357899999863 222211 11111 22334
Q ss_pred EecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCc------CEEEEEEcCCCCEEEEecCC
Q 018784 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHG------PVHCVRFSPGGESYASGSED 291 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~------~v~~l~~sp~~~~lasgs~D 291 (350)
.+.+ +++++++...++.|.+||. +++.+..+..+.. .+.+++|+|++..|+.++.+
T Consensus 239 ~~d~-~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 239 CIDS-DDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEBT-TCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECC-CCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 4444 4788888878899999998 5666555544332 68999999998666544444
No 171
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=2.2e-16 Score=140.67 Aligned_cols=256 Identities=14% Similarity=0.090 Sum_probs=183.9
Q ss_pred CCCCeeEeeCCCCceeeecc----C--ccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcC
Q 018784 39 KDSSPMLRNGETGDWIGTFE----G--HKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE 112 (350)
Q Consensus 39 ~d~~v~iw~~~~~~~~~~l~----g--H~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~ 112 (350)
.+++|.++|.++++....+. + .......+.+. .+.+.++...++.|.+||..+++.+..+.....+..+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 48899999999998876541 1 12345667774 45666677788999999999999888777667789999999
Q ss_pred CCCeEEEeeCCCeEEEEECCCCCCCCeeecCC----CCcEEEEEEeCCCCcEEEEEe-CCCeEEEEECCCCceeEeecCC
Q 018784 113 DTHLLLTGGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLETK 187 (350)
Q Consensus 113 ~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~~-~dg~i~iwd~~~~~~~~~~~~~ 187 (350)
+++..++...++.|.+||+.+.+......... ......+++ .++.++++.. .+++|.++|+.+++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 98554554489999999997654322211111 013445555 3566676665 4789999999999988888766
Q ss_pred CCeEEEEEecCCcEEEEEcC-----------CcEEEEECCCcceeeeeecCC--CCceeEecCCCCcEEEEecCCCeEEE
Q 018784 188 SPVTSAEVSRDGRYITTADG-----------SSVKFWDANHFGLVKGYNMPC--NTESASLEPKLGNIFIAGGEDMWVHV 254 (350)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~~-----------~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~sg~~d~~i~v 254 (350)
.....+.++|+|++++++.+ +.|.++|..+.+..+.+..+. .+..+.+.+..+.++++.+ .|.+
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~ 248 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWR 248 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEE
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEE
Confidence 55678889999998877653 579999999888777776543 4556667765444444433 8999
Q ss_pred EEcccCeeEEe--ecCCCcCEEEEEEcC-CCCEEEEe----cCCCcEEEecCC
Q 018784 255 FDFHTGEQIGC--NKGHHGPVHCVRFSP-GGESYASG----SEDGTIRIWQTN 300 (350)
Q Consensus 255 ~d~~~~~~~~~--~~~h~~~v~~l~~sp-~~~~lasg----s~Dg~v~vw~~~ 300 (350)
||..+++.... +.........++++| ++.++++. ..++.|.+||..
T Consensus 249 ~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 99988775421 222245789999999 56777777 678999999875
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=4.6e-15 Score=141.09 Aligned_cols=272 Identities=13% Similarity=0.138 Sum_probs=199.7
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC--CCCeeeeeeccccEeE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TGDEKHSFEHKHIVRA 107 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~--~~~~~~~~~h~~~V~~ 107 (350)
.+.++++...+++|.++|..+++.+.++... ..+..+.++|+++++++++.|+.|.+||+. +.+....+......+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 5678888889999999999999999888643 356689999999999999999999999995 7777766665556789
Q ss_pred EEEc----CCCCeEEEeeC-CCeEEEEECCCCCCCCeeec----------CCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 108 CAFS----EDTHLLLTGGF-EKILRIFDLNRPDAPPREVG----------NSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 108 ~~~~----~~~~~l~sg~~-d~~v~vwd~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
++|+ |+|++++++.. +++|.++|..+.+....... +....+..+..++....++++..++|+|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69998887654 69999999876443221110 012256777777777777888888899999
Q ss_pred EECCCCce--eEeecCCCCeEEEEEecCCcEEEEEc--CCcEEEEECCCcceeeeeec-CCCC---ceeE-ecCCCCcEE
Q 018784 173 WDARSGKI--VQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGLVKGYNM-PCNT---ESAS-LEPKLGNIF 243 (350)
Q Consensus 173 wd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~~l 243 (350)
+|..+.+. +..+........+.|+|+++++.++. ++.|.++|+.+.+.+..... .... .... +.+..+.++
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~ 404 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 404 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEE
Confidence 99876542 33344445567788999999875543 57899999999887766655 2211 1222 345446666
Q ss_pred EEec-CCCeEEEEEccc-------CeeEEeecCCCcCEEEEEEcCCCCEEEEecC-------CCcEEEecCCCC
Q 018784 244 IAGG-EDMWVHVFDFHT-------GEQIGCNKGHHGPVHCVRFSPGGESYASGSE-------DGTIRIWQTNPP 302 (350)
Q Consensus 244 ~sg~-~d~~i~v~d~~~-------~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~-------Dg~v~vw~~~~~ 302 (350)
+++. .++.|.++|..+ .+.+.++......-..+.++|+++++..... ...|.++|+.+.
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 6664 468999999987 5677777655444455789999998876552 469999998654
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2.3e-16 Score=153.63 Aligned_cols=271 Identities=11% Similarity=0.025 Sum_probs=169.3
Q ss_pred CCCccE-EEEEeC-CCCeeEeeCC--CCceeeeccC-----ccCCeEEEEECCCCcEEEEeeCC----------CeEEEe
Q 018784 28 TPDGFF-LVSASK-DSSPMLRNGE--TGDWIGTFEG-----HKGAVWSCCLDANALFSASGSAD----------FTAKLW 88 (350)
Q Consensus 28 s~dg~~-lasgs~-d~~v~iw~~~--~~~~~~~l~g-----H~~~V~~v~~~~~~~~l~s~s~D----------g~v~vW 88 (350)
+|||+. |+.++. +..|.+++.. .......+.. |...+..++|+|||+.|+.++.| ..|++|
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 369987 765554 4455556554 2033445655 67788999999999999988877 689999
Q ss_pred eCCC------CCeeeee-eccccEeEEEEcCCCCeEEEeeCC--------CeEEEEECC-CCC--CCCeeecCCCCcEEE
Q 018784 89 DALT------GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFE--------KILRIFDLN-RPD--APPREVGNSSGSIRT 150 (350)
Q Consensus 89 d~~~------~~~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d--------~~v~vwd~~-~~~--~~~~~~~~~~~~v~~ 150 (350)
|+.+ +...... .+...+..++|+|||++|+.++.+ ..|.+||+. ++. ........+...+..
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 9987 5554444 556778889999999999887755 379999997 331 222333445678899
Q ss_pred EEEeCCCCcEEEEEeCCC--eEEEEECCCCceeEeecCCCC---------eEEEEEecCCcEEEEEcCCcEEEE--ECCC
Q 018784 151 VAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSP---------VTSAEVSRDGRYITTADGSSVKFW--DANH 217 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg--~i~iwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~~~i~vw--d~~~ 217 (350)
+.|++++. +++++..++ .|.+||+.+++.......+.. +..+.+++++++++++..+.+++| |+.+
T Consensus 247 ~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 247 AEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp EEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred eEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 99997666 777877888 677777767765443333221 456888899988876644777888 6554
Q ss_pred cceeeeeecCCCCceeEe-cCCCCcEE-EEecCCC--eEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCc
Q 018784 218 FGLVKGYNMPCNTESASL-EPKLGNIF-IAGGEDM--WVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGT 293 (350)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~-~~~~~~~l-~sg~~d~--~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~ 293 (350)
.. ++.+..+..... .+ .+..+.++ ++++.+. .|.++|+.+++.......|...+....+.+...+.+....+..
T Consensus 326 ~~-~~~l~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 403 (662)
T 3azo_A 326 GE-LVDAAGPWTEWA-ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGRE 403 (662)
T ss_dssp TE-EEECCSSCCEEE-EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCE
T ss_pred Cc-EEEecCCCCeEE-EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCE
Confidence 43 344433322221 22 33333444 4444454 4555676677654433444433333344444444444444446
Q ss_pred EEEecCCC
Q 018784 294 IRIWQTNP 301 (350)
Q Consensus 294 v~vw~~~~ 301 (350)
|..|-+.+
T Consensus 404 i~~~~~~P 411 (662)
T 3azo_A 404 IHAHIYPP 411 (662)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 76665433
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=1.2e-15 Score=150.53 Aligned_cols=287 Identities=9% Similarity=0.021 Sum_probs=176.3
Q ss_pred eeccCCceeEEEe--cccCCCccEEEEEeCCCC---------eeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee
Q 018784 12 CHGHSRPVVDLFY--SPITPDGFFLVSASKDSS---------PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS 80 (350)
Q Consensus 12 ~~gH~~~v~~~~~--~~~s~dg~~lasgs~d~~---------v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s 80 (350)
+.+|......+.+ -.++|||++|+.++.+.+ +.+||+.+++.. .+..|.+.+..++|+|||+.+|.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~- 129 (740)
T 4a5s_A 52 LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV- 129 (740)
T ss_dssp ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-
T ss_pred EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-
Confidence 4666654433222 123459999999998744 459999998865 577888899999999999998877
Q ss_pred CCCeEEEeeCCCCCeeeee--eccccE-----------------eEEEEcCCCCeEEEeeCCC-----------------
Q 018784 81 ADFTAKLWDALTGDEKHSF--EHKHIV-----------------RACAFSEDTHLLLTGGFEK----------------- 124 (350)
Q Consensus 81 ~Dg~v~vWd~~~~~~~~~~--~h~~~V-----------------~~~~~~~~~~~l~sg~~d~----------------- 124 (350)
.|+.|.+|++.++...... .+...+ ..+.|+|||+.|+.++.|.
T Consensus 130 ~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~ 209 (740)
T 4a5s_A 130 WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQ 209 (740)
T ss_dssp ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCS
T ss_pred ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCC
Confidence 5799999999877644322 122212 3589999999998875332
Q ss_pred -------------------eEEEEECCC---CCC-CCeeec------CCCCcEEEEEEeCCCCcEEEEEe---CCCeEEE
Q 018784 125 -------------------ILRIFDLNR---PDA-PPREVG------NSSGSIRTVAWLHSDQTILSSCT---DSGGVRL 172 (350)
Q Consensus 125 -------------------~v~vwd~~~---~~~-~~~~~~------~~~~~v~~~~~~~~~~~~~~s~~---~dg~i~i 172 (350)
+|.+||+.+ +.. ....+. .+...+..++|++++..++.... .+..|++
T Consensus 210 ~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~ 289 (740)
T 4a5s_A 210 YPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDI 289 (740)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEE
T ss_pred CCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEE
Confidence 478888876 422 111222 25667889999986653443322 2347999
Q ss_pred EECCCCc----ee--Eee--c-CCCC-----eEEEEEecCCcEEE-E-E-cC--CcEEEEECCCcceeeeeecCCCCcee
Q 018784 173 WDARSGK----IV--QTL--E-TKSP-----VTSAEVSRDGRYIT-T-A-DG--SSVKFWDANHFGLVKGYNMPCNTESA 233 (350)
Q Consensus 173 wd~~~~~----~~--~~~--~-~~~~-----v~~~~~~~~~~~l~-~-~-~~--~~i~vwd~~~~~~~~~~~~~~~~~~~ 233 (350)
||+.+++ +. ..+ . .... .....|+|||+.++ . + .+ ..|.+||+.+....+ ++........
T Consensus 290 ~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~ 368 (740)
T 4a5s_A 290 CDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIG 368 (740)
T ss_dssp EEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEE
T ss_pred EECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEE
Confidence 9998887 22 111 1 2222 23678999998654 3 3 23 368889987654432 2221111111
Q ss_pred EecCCCCcEEEEecC----CC--eEEEEEcccCeeEEeec----CCCcCEEEEEEcCCCCEEEEecCC---CcEEEecCC
Q 018784 234 SLEPKLGNIFIAGGE----DM--WVHVFDFHTGEQIGCNK----GHHGPVHCVRFSPGGESYASGSED---GTIRIWQTN 300 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~----d~--~i~v~d~~~~~~~~~~~----~h~~~v~~l~~sp~~~~lasgs~D---g~v~vw~~~ 300 (350)
.+.++.+.++.++.. .+ .|+..++..+.....+. +....+..+.|+|++++++..... ..+.+++..
T Consensus 369 ~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 369 IEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp EEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred EEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 222333455555554 23 34444555444332343 234678999999999976543322 356777665
Q ss_pred C
Q 018784 301 P 301 (350)
Q Consensus 301 ~ 301 (350)
.
T Consensus 449 ~ 449 (740)
T 4a5s_A 449 N 449 (740)
T ss_dssp T
T ss_pred C
Confidence 3
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=1.3e-15 Score=137.48 Aligned_cols=259 Identities=11% Similarity=0.022 Sum_probs=177.8
Q ss_pred ccCCceeEEEecccCCCccEEEEEe----------CCCCeeEeeCCCCceeeeccCc------cCCeEEEEECCCCcEEE
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH------KGAVWSCCLDANALFSA 77 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs----------~d~~v~iw~~~~~~~~~~l~gH------~~~V~~v~~~~~~~~l~ 77 (350)
.+..| .++|+| ||++|.+++ .+++|.+||..+++.+.++..+ ......++++|++++|+
T Consensus 49 ~g~~p--~i~~sp---dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 49 TAFNG--HVQVSN---DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp CCEEE--EEEECT---TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred CCCCC--ceEECC---CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 34445 777876 999998876 3677999999999888777532 23456789999999988
Q ss_pred EeeC--CCeEEEeeCCCCCeeee-eeccccEeEEEEcCCC-CeEEEeeCCCeEEEEECCCCCCCCee------ecCCCCc
Q 018784 78 SGSA--DFTAKLWDALTGDEKHS-FEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPRE------VGNSSGS 147 (350)
Q Consensus 78 s~s~--Dg~v~vWd~~~~~~~~~-~~h~~~V~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~~~------~~~~~~~ 147 (350)
++.. +++|.+||+.+++.+.. +..... ..+.+.|++ ..+++.+.|+.+.+|++......... .......
T Consensus 124 v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~ 202 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP 202 (361)
T ss_dssp EEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC
T ss_pred EECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc
Confidence 8763 68999999999877766 655433 335567765 67778889999999987542211100 0011111
Q ss_pred EEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce--eEeecC-----------CCCeEEEEEecCCcEEEEE-c-------
Q 018784 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLET-----------KSPVTSAEVSRDGRYITTA-D------- 206 (350)
Q Consensus 148 v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~--~~~~~~-----------~~~v~~~~~~~~~~~l~~~-~------- 206 (350)
+ .+.+.+.+..++ ..+.+++|.++|+..... ...+.. ......++++|+++.+... .
T Consensus 203 ~-~~~~~~~g~~~~-~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 203 I-FIAPALDKDKAH-FVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp B-CSCCEECSSEEE-EEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred e-EEEecccCCEEE-EEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 1 111223333333 345678999999875532 222111 1112236889997765443 2
Q ss_pred ----CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccC--eeEEeecCCCcCEEEEEEcC
Q 018784 207 ----GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG--EQIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 207 ----~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~--~~~~~~~~h~~~v~~l~~sp 280 (350)
...|.+||+.+.+.+..+..+. ...+.+.++ +++|++++. +.|.+||..++ +.+..+..+....+.++++|
T Consensus 281 ~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spd-g~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQ-RNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETT-TTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCC-CCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 2479999999999999888877 777778774 667776666 99999999999 99888877778889999999
Q ss_pred CCC
Q 018784 281 GGE 283 (350)
Q Consensus 281 ~~~ 283 (350)
+|.
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=4.9e-15 Score=132.40 Aligned_cols=256 Identities=13% Similarity=0.079 Sum_probs=163.2
Q ss_pred CceeEEEecccCCCccEEEEEe---------CCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCC---C-
Q 018784 17 RPVVDLFYSPITPDGFFLVSAS---------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---F- 83 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs---------~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D---g- 83 (350)
..+....+ ||+.+|... .++.+.+|+..+++.. .+ ..+..++|+|+|+.++..+.+ +
T Consensus 15 ~~~~~~~~-----dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT-----KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE-----ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE-----CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34555554 677766542 2567889999888754 34 567889999999988877654 3
Q ss_pred -eEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCC---------------------------CeEEEEECCCCC
Q 018784 84 -TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---------------------------KILRIFDLNRPD 135 (350)
Q Consensus 84 -~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d---------------------------~~v~vwd~~~~~ 135 (350)
.|.+||+.+++......+.. +..++|+|+++.|+.++.+ ..|.+||+.++.
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 37777888776665555555 9999999999988887642 568899987654
Q ss_pred CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCC-------eEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEE-EcC
Q 018784 136 APPREVGNSSGSIRTVAWLHSDQTILSSCTDSG-------GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADG 207 (350)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~ 207 (350)
....... . .+..+.|++++ +++++..+. ...+|.+.+++....... ..+.. ++|+|++++. +.+
T Consensus 164 ~~~~l~~--~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~--~spdg~~l~~~~~~ 235 (347)
T 2gop_A 164 VIEEFEK--P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYA--VDSDGERILLYGKP 235 (347)
T ss_dssp EEEEEEE--E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEE--EEECSSCEEEEECC
T ss_pred EEeeecC--C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC-cceee--ECCCCCEEEEEEcc
Confidence 3112222 2 66788888755 666665432 334443335543322222 33433 3999987654 322
Q ss_pred --------CcEEEEECCCcceeeeeecCCCC-ce-eEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEE
Q 018784 208 --------SSVKFWDANHFGLVKGYNMPCNT-ES-ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVR 277 (350)
Q Consensus 208 --------~~i~vwd~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~ 277 (350)
..|.+|| +............. .. ..+. ++ ++++++.++.++|| +.+++.. .+..+...|.+++
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~ 308 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFD 308 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEE
T ss_pred ccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeee
Confidence 3578888 33322211111111 22 3343 45 88899999999999 8866553 3444577899999
Q ss_pred EcCCCCEEEEecCCCcE-EEecCC
Q 018784 278 FSPGGESYASGSEDGTI-RIWQTN 300 (350)
Q Consensus 278 ~sp~~~~lasgs~Dg~v-~vw~~~ 300 (350)
|+| .++++++.++.. .||.++
T Consensus 309 ~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 309 VDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ESS--SEEEEEECSSSCCEEEEES
T ss_pred eeC--cEEEEEcCCCChHHheEeC
Confidence 999 677777777654 777664
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=5e-13 Score=116.33 Aligned_cols=274 Identities=9% Similarity=0.001 Sum_probs=188.8
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceee-eccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
..+...+.++++++ +|.+.++...++.+.+|+.. ++... .+..+...+..+++++++.++++...++.|..||..
T Consensus 11 ~~~~~~~~~i~~d~---~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSD---KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CSSSCCEEEEEECT---TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcCCCccceEECC---CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 45567889998886 89888877778899999987 65543 233455778999999999998888778999999976
Q ss_pred CCCeee-eee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 92 TGDEKH-SFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 92 ~~~~~~-~~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
+.... .+. ....+..+++.+++.+.++...++.|.+||. ++.............+..+++.+ ++.++++...++.
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNA 163 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCE
Confidence 33221 121 3456899999999988888777889999998 33222111122345677888764 4567777666789
Q ss_pred EEEEECCCCceeEe-ec-CCCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecC---CCCceeEecCCCCcEE
Q 018784 170 VRLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIF 243 (350)
Q Consensus 170 i~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 243 (350)
|..||. +++.... +. ....+..++++++++++++.. ++.|..||. +... ..+..+ ..+..+.+.+ +++++
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~ 239 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKIPTPNARPHAITAGA-GIDLW 239 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECS-TTCEE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEECCCCCCCceeEEECC-CCCEE
Confidence 999998 6665432 22 234578899999998877664 578999998 5443 233333 2233344444 47788
Q ss_pred EEecCCCeEEEEEcccCeeEEe-ecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 244 IAGGEDMWVHVFDFHTGEQIGC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 244 ~sg~~d~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
++...++.|..||. ++..... +..+...+.++++ +++.++++.+. +.|..++..
T Consensus 240 v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~~ 294 (299)
T 2z2n_A 240 FTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTLI 294 (299)
T ss_dssp EEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEEC
T ss_pred EeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecC-CcEEEEEcC
Confidence 87777899999998 4543322 3345567999999 99988777664 455555543
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=1.4e-15 Score=138.09 Aligned_cols=239 Identities=10% Similarity=0.018 Sum_probs=157.1
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEE--ECCCCcEEEE------------
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDANALFSAS------------ 78 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~--~~~~~~~l~s------------ 78 (350)
.+|...+..+.|+| ||+.|+.++.++.+++||+.+++....+..+...+.... +++++.+++.
T Consensus 77 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp CSSCBCSSSCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred eCCCCCccceEEcC---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 45665665666775 999999999999999999999988776666666554333 4899998874
Q ss_pred ----------eeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcC-CCCeEEEeeCC------CeEEEEECCCCCCCCeee
Q 018784 79 ----------GSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE-DTHLLLTGGFE------KILRIFDLNRPDAPPREV 141 (350)
Q Consensus 79 ----------~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~ 141 (350)
.+.+..|.+||+.+++......+...+..++|+| +++.|+....+ ..|.++|+..... ..+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l 231 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--RKV 231 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--EES
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--EEe
Confidence 2355789999999988766667777899999999 99988776653 3677778764322 222
Q ss_pred cCCC--CcEEEEEEeCCCCcEEEEEeCCC----eEEEEECCCCceeEeecCCCC------eEEEEEecCCcEEEE-----
Q 018784 142 GNSS--GSIRTVAWLHSDQTILSSCTDSG----GVRLWDARSGKIVQTLETKSP------VTSAEVSRDGRYITT----- 204 (350)
Q Consensus 142 ~~~~--~~v~~~~~~~~~~~~~~s~~~dg----~i~iwd~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~----- 204 (350)
..+. ..+..+.|++++..++.....++ .|.+||+.+++.......... .....|+|+|+.|+.
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 2222 35777889987776755544322 399999998874322221110 111368999987653
Q ss_pred -----EcCCcEEEEECCCcceeeeeecCC-----------CCceeEecCCCCcEEE-EecCCCeEEEEEc
Q 018784 205 -----ADGSSVKFWDANHFGLVKGYNMPC-----------NTESASLEPKLGNIFI-AGGEDMWVHVFDF 257 (350)
Q Consensus 205 -----~~~~~i~vwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~-sg~~d~~i~v~d~ 257 (350)
..+..|.+||+.+.....-..... ......+.++ ++.|+ ++..++...||.+
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spD-g~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPD-DKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCC-CCEEEEEecCCCceeEEEE
Confidence 234579999998765433222222 2334556664 55444 5555776666654
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=2.1e-15 Score=147.78 Aligned_cols=271 Identities=10% Similarity=-0.027 Sum_probs=176.3
Q ss_pred CCccEEEEEeCCC---CeeEee--CCCCceeeec------cCccCCeEEEEECCCCcEEE-----EeeCCCeEEEeeCCC
Q 018784 29 PDGFFLVSASKDS---SPMLRN--GETGDWIGTF------EGHKGAVWSCCLDANALFSA-----SGSADFTAKLWDALT 92 (350)
Q Consensus 29 ~dg~~lasgs~d~---~v~iw~--~~~~~~~~~l------~gH~~~V~~v~~~~~~~~l~-----s~s~Dg~v~vWd~~~ 92 (350)
|+|.+++-...++ .-.||. ...++....+ ++|...+..++|+|||+++| +|+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 5888877766654 344554 3344433222 35766789999999999988 566678999999998
Q ss_pred CCee-ee-eeccccEeEEEEcCCCCeEEEeeCCCe-------------EEEEECCCCCCCCeee---cCCCCcEEEEEEe
Q 018784 93 GDEK-HS-FEHKHIVRACAFSEDTHLLLTGGFEKI-------------LRIFDLNRPDAPPREV---GNSSGSIRTVAWL 154 (350)
Q Consensus 93 ~~~~-~~-~~h~~~V~~~~~~~~~~~l~sg~~d~~-------------v~vwd~~~~~~~~~~~---~~~~~~v~~~~~~ 154 (350)
++.+ .. +... ....++|+|||+.|+.++.|.. |++|++.++....... ..+...+..+.|+
T Consensus 157 g~~~~~~~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSKVDVIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCSSCCBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcCCcccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 8764 21 1111 1267899999999999988776 9999998654322222 2234568889999
Q ss_pred CCCCcEEEEEeCC-C--eEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc----CCcEEEEECCCcce--eeeee
Q 018784 155 HSDQTILSSCTDS-G--GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD----GSSVKFWDANHFGL--VKGYN 225 (350)
Q Consensus 155 ~~~~~~~~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~vwd~~~~~~--~~~~~ 225 (350)
+++..++++...+ + .|.+||..+++...............+ +++.+++.++ +..|.+||+.+... .+.+.
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 8777776665443 2 677777666654333333334444445 5666555443 46799999876542 12222
Q ss_pred cCC-C--CceeEecCCCCcEEEEecCCCeEEEEEcc-cCeeEEeecCC-CcCEEEEEEcCCCCEEE----EecCCCcEEE
Q 018784 226 MPC-N--TESASLEPKLGNIFIAGGEDMWVHVFDFH-TGEQIGCNKGH-HGPVHCVRFSPGGESYA----SGSEDGTIRI 296 (350)
Q Consensus 226 ~~~-~--~~~~~~~~~~~~~l~sg~~d~~i~v~d~~-~~~~~~~~~~h-~~~v~~l~~sp~~~~la----sgs~Dg~v~v 296 (350)
.+. . .....+. .+.++++...|+..+||.+. ++..+..+..+ .+.|..++++|+++.++ +....++|++
T Consensus 315 ~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 315 PEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp CCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred cCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 211 1 1223333 56788899999988888665 46556666555 66788899999987766 3445688999
Q ss_pred ecCCCCC
Q 018784 297 WQTNPPN 303 (350)
Q Consensus 297 w~~~~~~ 303 (350)
||+...+
T Consensus 393 ~d~~~g~ 399 (695)
T 2bkl_A 393 TSVSTGK 399 (695)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9987654
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=2.6e-14 Score=125.08 Aligned_cols=238 Identities=10% Similarity=0.023 Sum_probs=166.8
Q ss_pred eccCCceeEEEecccCCCcc-EEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 13 HGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
..+.....+++|+| +|+ +++++..++.|..|+..++ ...+..+...+.++++++++.++++...++.|.+||..
T Consensus 24 ~~~~~~~eg~~~d~---~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 24 ADGFTWTEGPVYVP---ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp ECCCSSEEEEEEEG---GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred ecCCccccCCeEeC---CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34556667888887 887 8888999999999999877 56677788889999999999999888888999999997
Q ss_pred CCCeeeeeec-----cccEeEEEEcCCCCeEEE----eeC-------------CCeEEEEECCCCCCCCeeecCCCCcEE
Q 018784 92 TGDEKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSGSIR 149 (350)
Q Consensus 92 ~~~~~~~~~h-----~~~V~~~~~~~~~~~l~s----g~~-------------d~~v~vwd~~~~~~~~~~~~~~~~~v~ 149 (350)
+++....... ...+..+++.|+|+++++ |.. .+.|..++.. + .............
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCCSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCCCCCc
Confidence 7765443321 234678999999998887 331 2345555543 2 2223334455678
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEECC-CCce---eEeec-CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeee
Q 018784 150 TVAWLHSDQTILSSCTDSGGVRLWDAR-SGKI---VQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~~~dg~i~iwd~~-~~~~---~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~ 224 (350)
.++|++++..+ ++...++.|.+||+. +++. ...+. ....+..++++++|+++++. ++.|.+||.. ++.+..+
T Consensus 176 gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 176 GLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEE
T ss_pred cEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEE
Confidence 89988766555 888888999999987 4544 22221 22345678999999988777 7889999986 5566666
Q ss_pred ecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCee
Q 018784 225 NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~ 262 (350)
..+.....+.+..++++.|.+++.+ .+..++..+.+.
T Consensus 253 ~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp ECSSCCCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred ECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 6655555556644456666666655 455555555443
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=9.6e-15 Score=143.46 Aligned_cols=244 Identities=9% Similarity=-0.048 Sum_probs=159.2
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCC-----CeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCe----
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDS-----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT---- 84 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~-----~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~---- 84 (350)
+|+..+..++||| ||++||.++.++ +|++||+.+++.+.....+. .+..++|+||++.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SP---Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSE---DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECT---TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccc
Confidence 4555677777775 999998776544 89999999998875332222 2567899999999988888876
Q ss_pred ------------EEEeeCCCCCee--eeee---ccccEeEEEEcCCCCeEEEeeC-----CCeEEEEECCC------CCC
Q 018784 85 ------------AKLWDALTGDEK--HSFE---HKHIVRACAFSEDTHLLLTGGF-----EKILRIFDLNR------PDA 136 (350)
Q Consensus 85 ------------v~vWd~~~~~~~--~~~~---h~~~V~~~~~~~~~~~l~sg~~-----d~~v~vwd~~~------~~~ 136 (350)
|++|++.++... ..+. |...+..+.|+|+|++|+..+. +..|.+||+.+ +..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 999999877632 2222 3455789999999999887664 67899999875 332
Q ss_pred CCeeecCCCCcEEEEEEeCCCCcEEEEEeCC---CeEEEEECCCCce--eEeecCC-C--CeEEEEEecCCcEEEEEcCC
Q 018784 137 PPREVGNSSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKI--VQTLETK-S--PVTSAEVSRDGRYITTADGS 208 (350)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---g~i~iwd~~~~~~--~~~~~~~-~--~v~~~~~~~~~~~l~~~~~~ 208 (350)
....+..+...+.. .|+++++.+++.+..+ ..|.+||+.++.. ...+..+ . .+..+.+++++
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------- 347 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN--------- 347 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT---------
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC---------
Confidence 33333334444433 3666666666665443 3688999877631 2222221 1 23344444333
Q ss_pred cEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCe--EEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEE
Q 018784 209 SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMW--VHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYA 286 (350)
Q Consensus 209 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~--i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~la 286 (350)
.++++...|+. |++||+.+|+.+..+..+.+.|..++++|+++.++
T Consensus 348 --------------------------------~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 348 --------------------------------FLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp --------------------------------EEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred --------------------------------EEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 33444444442 44556556666666666777788999999987654
Q ss_pred -Eec---CCCcEEEecCCCCC
Q 018784 287 -SGS---EDGTIRIWQTNPPN 303 (350)
Q Consensus 287 -sgs---~Dg~v~vw~~~~~~ 303 (350)
+.+ ..++|++||+...+
T Consensus 396 ~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECSSCCCEEEEEETTSSS
T ss_pred EEEeCCCCCCEEEEEECCCCc
Confidence 322 45789999987654
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.69 E-value=2.4e-14 Score=124.22 Aligned_cols=189 Identities=12% Similarity=0.069 Sum_probs=134.5
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCcc-CCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeecc--ccEe
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVR 106 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~-~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~--~~V~ 106 (350)
.+++|++++.|+.|.+||.++|+.+..+..|. ..+..+.+.|+|+++++ .++.|..||. +++.+..+... ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 47899999999999999999999999998876 47888999999999994 5888999999 88888877642 4688
Q ss_pred EEEEcCCCCeEEEeeC-CCeEEEEECCCCCCCCeeec-----CCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce
Q 018784 107 ACAFSEDTHLLLTGGF-EKILRIFDLNRPDAPPREVG-----NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (350)
Q Consensus 107 ~~~~~~~~~~l~sg~~-d~~v~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~ 180 (350)
++.+.++|+++++.+. ++.+..+|.. ++....... .+......+... +++.++++...++.|..||.. |+.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~-~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKN-KKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEEC-TTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceEC-CCCCEEEEecCCCEEEEECCC-CCE
Confidence 9999999999998877 7777777653 222111110 011122223333 355677777778888888877 888
Q ss_pred eEeecCCCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeee
Q 018784 181 VQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGY 224 (350)
Q Consensus 181 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~ 224 (350)
+..+........+.+.+++.+++++. ++.|..+|..+++.+..+
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 77777655555566667776665544 345666666655555444
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=1.9e-13 Score=130.03 Aligned_cols=283 Identities=12% Similarity=0.047 Sum_probs=191.9
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCC--CCceeeeccCccCCeEEEEEC----CCCcEEEEe-eCCCeEEEeeC
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLD----ANALFSASG-SADFTAKLWDA 90 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~--~~~~~~~l~gH~~~V~~v~~~----~~~~~l~s~-s~Dg~v~vWd~ 90 (350)
.+..+.|+| ||++|.+++.|+.|.+||.. +++.+.++..... -..++++ |+|++++.+ -.+++|.|+|.
T Consensus 198 ~p~~v~~Sp---DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 198 AVHISRLSA---SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp CEEEEEECT---TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CccceEECC---CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 455777775 99999999999999999995 8888877765433 4688999 699876655 45599999999
Q ss_pred CCCCeeeeee-----------ccc-cEeEEEEcCCCCe-EEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCC
Q 018784 91 LTGDEKHSFE-----------HKH-IVRACAFSEDTHL-LLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 91 ~~~~~~~~~~-----------h~~-~V~~~~~~~~~~~-l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
.+.+.+..+. |.. .+..+.+++++.. +++...++.|.++|....................+.|.+++
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 353 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence 9888776553 222 5778888887654 45556779999999865331111111223456678888877
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEeecC-C---CCeEEE-EEecCC-cEEEEEc--CCcEEEEECCC-------cceee
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTLET-K---SPVTSA-EVSRDG-RYITTAD--GSSVKFWDANH-------FGLVK 222 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~---~~v~~~-~~~~~~-~~l~~~~--~~~i~vwd~~~-------~~~~~ 222 (350)
..+++++..+++|.++|+.+++.+..+.. . .+-... .+.|++ .+++++. ++.|.++|..+ .+.++
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 77777887788999999999988776654 2 111122 257874 4555553 47899999887 66777
Q ss_pred eeecCCCC-ceeEecCCCCcEEEEecC------CCeEEEEEcccC-----eeE-Eeec--------CCCcCEEEEEEcCC
Q 018784 223 GYNMPCNT-ESASLEPKLGNIFIAGGE------DMWVHVFDFHTG-----EQI-GCNK--------GHHGPVHCVRFSPG 281 (350)
Q Consensus 223 ~~~~~~~~-~~~~~~~~~~~~l~sg~~------d~~i~v~d~~~~-----~~~-~~~~--------~h~~~v~~l~~sp~ 281 (350)
.+...... ..+..+|+...+++.... .+.|.+||+.+. ... ..+. .-...+..+.|+|+
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 76654332 334455543344444321 358999999877 211 2221 12346899999999
Q ss_pred CCEEEEec-----CCCcEEEecCCCCCc
Q 018784 282 GESYASGS-----EDGTIRIWQTNPPNH 304 (350)
Q Consensus 282 ~~~lasgs-----~Dg~v~vw~~~~~~~ 304 (350)
|+.+..+. .++.|.|+|..+.+.
T Consensus 514 G~~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 514 GTEVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp SSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCEEEEEeecCCCCCCcEEEEECCCceE
Confidence 98865442 378999999876554
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=5.9e-14 Score=120.76 Aligned_cols=239 Identities=10% Similarity=-0.070 Sum_probs=156.4
Q ss_pred ceeEEEecccCCCccEEE-EEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCee
Q 018784 18 PVVDLFYSPITPDGFFLV-SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~la-sgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~ 96 (350)
...++++++ +|++.+ +.+.++.|.+|+..+.........+...+.++++++++.++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~---~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS---AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT---TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECC---CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 567788875 888777 557788999999766554332233445677899999999877766 899999998665433
Q ss_pred eee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEEC
Q 018784 97 HSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (350)
Q Consensus 97 ~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~ 175 (350)
... .....+..+++.+++.++++...++.|.+|+..+.... .........+..+++.+ ++.++++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeC-CCCEEEEECCCCEEEEEec
Confidence 221 22356899999999998887777889999976432211 11111223456777765 4457777766789999998
Q ss_pred CCCceeEeecC-CCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEE
Q 018784 176 RSGKIVQTLET-KSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVH 253 (350)
Q Consensus 176 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~ 253 (350)
........... ...+..++++++|.++++.. ++.|.+||....
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~----------------------------------- 223 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST----------------------------------- 223 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-----------------------------------
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-----------------------------------
Confidence 76654332222 24566777777776555543 445666654321
Q ss_pred EEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCc
Q 018784 254 VFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNH 304 (350)
Q Consensus 254 v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 304 (350)
........+...+.++++.|+|+++++.+.+++|++++...+++
T Consensus 224 -------~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 224 -------TSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -------CCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred -------cceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 11111112234688999999999999999999999999865544
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=4.7e-14 Score=125.52 Aligned_cols=239 Identities=7% Similarity=-0.018 Sum_probs=170.2
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeee
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~ 97 (350)
....+.+. ++++.++...+++|.+||..+++.+.++.. ......+++++++.+.++...++.|.+||..+++...
T Consensus 45 ~~~~i~~~----~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 45 VAQSMVIR----DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp CEEEEEEE----TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred cceEEEEE----CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 45667664 566777777789999999999999888853 3567888998888777776689999999999887666
Q ss_pred eeeccc------cEeEEEEcCCCCeEEEee-CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC---
Q 018784 98 SFEHKH------IVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS--- 167 (350)
Q Consensus 98 ~~~h~~------~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d--- 167 (350)
.+.-.. .+..+++ .++.++++.. .++.|.+||+.+.+..... . .......+.+.+ ++++++++..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i-~-~g~~p~~i~~~~-dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL-T-IGIQPTSLVMDK-YNKMWTITDGGYEG 195 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE-E-CSSCBCCCEECT-TSEEEEEBCCBCTT
T ss_pred EEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE-E-cCCCccceEEcC-CCCEEEEECCCccC
Confidence 554333 5667777 3444444433 4899999999865432222 1 122344566654 55677766554
Q ss_pred -------CeEEEEECCCCceeEeecC--CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecC---CCCceeEe
Q 018784 168 -------GGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP---CNTESASL 235 (350)
Q Consensus 168 -------g~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~---~~~~~~~~ 235 (350)
+.|.++|..+++....+.. ......++++|+++.+..++. .|.+||..+.+.......+ ..+..+.+
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTV 274 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEE
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEE
Confidence 7899999999988777654 236789999999988877665 8999999876653221111 23455667
Q ss_pred cCCCCcEEEEe----cCCCeEEEEEcccCeeEEeec
Q 018784 236 EPKLGNIFIAG----GEDMWVHVFDFHTGEQIGCNK 267 (350)
Q Consensus 236 ~~~~~~~l~sg----~~d~~i~v~d~~~~~~~~~~~ 267 (350)
.|..+.++++. ..++.|.+||.. ++.+..+.
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 77678888988 778999999998 88776654
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.1e-13 Score=123.21 Aligned_cols=215 Identities=19% Similarity=0.153 Sum_probs=143.4
Q ss_pred cCCeEEEEECCCCcEEEEeeCC------------------------CeEEEeeCCCCCeeeeee--ccccEeEEEEcCCC
Q 018784 61 KGAVWSCCLDANALFSASGSAD------------------------FTAKLWDALTGDEKHSFE--HKHIVRACAFSEDT 114 (350)
Q Consensus 61 ~~~V~~v~~~~~~~~l~s~s~D------------------------g~v~vWd~~~~~~~~~~~--h~~~V~~~~~~~~~ 114 (350)
-+.+.++++++++.++++.+.+ ++|.+||..+++....+. +-..+..++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3678999999999999988877 479999998888766554 33468999999999
Q ss_pred CeEEEeeCCCeEEEEECCCCCCCCeee---------cCCCCcEEEEEEeCCCCcEEEEEe-CCCeEEEEECCCCceeEee
Q 018784 115 HLLLTGGFEKILRIFDLNRPDAPPREV---------GNSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTL 184 (350)
Q Consensus 115 ~~l~sg~~d~~v~vwd~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~s~~-~dg~i~iwd~~~~~~~~~~ 184 (350)
+++++...++.|++||........... ..+...+..+++.+.++.++++.+ .++.|++|| .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986432123322 123346888998875777888875 688999999 556655444
Q ss_pred cCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEE
Q 018784 185 ETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIG 264 (350)
Q Consensus 185 ~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~ 264 (350)
..... +. ..... .+ ..+..+.+.+..+.++++...++.|++||..+|+.+.
T Consensus 182 ~~~g~-----------------~~------~~~~~---~~---~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 182 GEESS-----------------GS------SPRPG---QF---SVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR 232 (329)
T ss_dssp CEECC-----------------SS------SCCTT---EE---SCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred ccCCC-----------------CC------CCCCc---cc---CCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 21100 00 00000 00 0122334444335666777777778888877777766
Q ss_pred eec--CCCcCEEEEEEcC------CCCEEEEecCCCcEEEecCCCCCcc
Q 018784 265 CNK--GHHGPVHCVRFSP------GGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 265 ~~~--~h~~~v~~l~~sp------~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
.+. .+...+.+++|+| ++..+++.+.+..|++|+....+..
T Consensus 233 ~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 233 EIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp EECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred EEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 653 4566788999999 4444444445668999998665544
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.5e-13 Score=120.19 Aligned_cols=232 Identities=11% Similarity=0.046 Sum_probs=157.5
Q ss_pred eeeeccCccCCeEEEEECCCCc-EEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEEC
Q 018784 53 WIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDL 131 (350)
Q Consensus 53 ~~~~l~gH~~~V~~v~~~~~~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~ 131 (350)
.+..+..+.....+++|++++. +++++..++.|..|+..++ ......+...+.+++++|+++++++...++.|.+||.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 3344555566678899999998 7888889999999999877 3333345667899999999998888777899999998
Q ss_pred CCCCCCCeeec---CCCCcEEEEEEeCCCCcEEEE----Ee-------------CCCeEEEEECCCCceeEeecCCCCeE
Q 018784 132 NRPDAPPREVG---NSSGSIRTVAWLHSDQTILSS----CT-------------DSGGVRLWDARSGKIVQTLETKSPVT 191 (350)
Q Consensus 132 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s----~~-------------~dg~i~iwd~~~~~~~~~~~~~~~v~ 191 (350)
.++........ .....+..+++.+ ++.++++ ++ ..+.|..+|.. ++............
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCc
Confidence 65442211101 1112345677765 5567766 22 12466666665 55444444455678
Q ss_pred EEEEecCCcEEEEEc-CCcEEEEECC-Ccce---eeeeec-CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe
Q 018784 192 SAEVSRDGRYITTAD-GSSVKFWDAN-HFGL---VKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC 265 (350)
Q Consensus 192 ~~~~~~~~~~l~~~~-~~~i~vwd~~-~~~~---~~~~~~-~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~ 265 (350)
.++|+|+++++++.. ++.|.+||+. .+.. .+.+.. ...+..+.+.+ +++++++. ++.|.+||.. ++.+..
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEE
Confidence 899999999885544 5789999986 3332 122211 11223445554 47777766 7889999986 777777
Q ss_pred ecCCCcCEEEEEE-cCCCCEEEEecCCC
Q 018784 266 NKGHHGPVHCVRF-SPGGESYASGSEDG 292 (350)
Q Consensus 266 ~~~h~~~v~~l~~-sp~~~~lasgs~Dg 292 (350)
+..+.. +.+++| +|+++.|+.++.++
T Consensus 252 ~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 252 VLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred EECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 777777 999999 68988888887764
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=2.2e-15 Score=136.87 Aligned_cols=254 Identities=11% Similarity=-0.039 Sum_probs=158.0
Q ss_pred EeeCCCCceeeeccCccCC-----eEEEEECCCCcEEEEeeCC---CeEEEeeCCCCCeeeeeeccccEe-EEEEcCCCC
Q 018784 45 LRNGETGDWIGTFEGHKGA-----VWSCCLDANALFSASGSAD---FTAKLWDALTGDEKHSFEHKHIVR-ACAFSEDTH 115 (350)
Q Consensus 45 iw~~~~~~~~~~l~gH~~~-----V~~v~~~~~~~~l~s~s~D---g~v~vWd~~~~~~~~~~~h~~~V~-~~~~~~~~~ 115 (350)
+.|..+++.+..+..+... +..++|+|+|++++....+ ..|.+||+.+++......+...+. .+.|+|+++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 4567788777777665443 6677899999987765433 468888988776544444433333 378999999
Q ss_pred eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEE---E----------------EEeCCCCcEEEEE----eCCCeEEE
Q 018784 116 LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRT---V----------------AWLHSDQTILSSC----TDSGGVRL 172 (350)
Q Consensus 116 ~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~---~----------------~~~~~~~~~~~s~----~~dg~i~i 172 (350)
.|+.++.++.|.+||+..+.... ....+...... + .|++.+..+++.. ..+..|.+
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQV-IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEE-EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEE-EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 99999999999999997654321 11212221111 1 2233232222211 35568999
Q ss_pred EECCCCceeEeecCCCCeEEEEEec-CCcEEE-EEcC------CcEEEEECCCcceeeeeecC-C-CCceeEecCCCCcE
Q 018784 173 WDARSGKIVQTLETKSPVTSAEVSR-DGRYIT-TADG------SSVKFWDANHFGLVKGYNMP-C-NTESASLEPKLGNI 242 (350)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~-~~~~------~~i~vwd~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 242 (350)
||+.+++..........+..+.|+| +++.++ .+.+ ..|.+||+............ . ......+.+ +++.
T Consensus 173 ~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~ 251 (396)
T 3c5m_A 173 VDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-DGSA 251 (396)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-TSSC
T ss_pred EECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-CCCE
Confidence 9999888766555666788999999 777544 3332 36888888654422211110 1 122345555 4665
Q ss_pred EEEecCC-----CeEEEEEcccCeeEEeecCCCcCEEEEEEcC-CCCEEEEec----------------CCCcEEEecCC
Q 018784 243 FIAGGED-----MWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP-GGESYASGS----------------EDGTIRIWQTN 300 (350)
Q Consensus 243 l~sg~~d-----~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp-~~~~lasgs----------------~Dg~v~vw~~~ 300 (350)
|+..+.+ +.|++||+.+++....... .. .. +.|+| +++++++++ .+..|++||+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEEVMVM-PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEEEEEC-CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEEEecCCCCccceEEEEECCCCCeEEeeeC-CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 5555433 4599999988765432221 11 23 89999 999888754 34789999986
Q ss_pred CCC
Q 018784 301 PPN 303 (350)
Q Consensus 301 ~~~ 303 (350)
...
T Consensus 329 ~~~ 331 (396)
T 3c5m_A 329 AKS 331 (396)
T ss_dssp TTB
T ss_pred cCc
Confidence 543
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=1.1e-12 Score=118.76 Aligned_cols=269 Identities=12% Similarity=0.040 Sum_probs=178.3
Q ss_pred CCccEEEEEeC--CC---CeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee----------CCCeEEEeeCCCC
Q 018784 29 PDGFFLVSASK--DS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (350)
Q Consensus 29 ~dg~~lasgs~--d~---~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s----------~Dg~v~vWd~~~~ 93 (350)
|+++++..... .. +|.++|..+++.+.++..-..+ .++++||+++++.+. .+++|.+||..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 57776665543 22 7899999999998888754444 789999999888765 3788999999888
Q ss_pred Ceeeeeecc--------ccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 94 ~~~~~~~h~--------~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
+....+.-. .....++|+|+|++|+++.. ++.|.++| .+.+....... ..+ ++.+.+.+...+++
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~---~~~~~~~~~~~~~~ 182 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPT---CYHIHPGAPSTFYL 182 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCc---eEEEEeCCCceEEE
Confidence 766655321 23568999999999998874 57899999 76543222021 112 23445556566667
Q ss_pred EeCCCeEEEEECCCCceeEeec------CCCCe-EEEEEecCC-cEEEEEcCCcEEEEECCCcc--eeeeeec-------
Q 018784 164 CTDSGGVRLWDARSGKIVQTLE------TKSPV-TSAEVSRDG-RYITTADGSSVKFWDANHFG--LVKGYNM------- 226 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~~~~~~------~~~~v-~~~~~~~~~-~~l~~~~~~~i~vwd~~~~~--~~~~~~~------- 226 (350)
...||++.++|. +++...... ...++ ....+.+++ .++..+..+.+.+.|+.... .+..+..
T Consensus 183 ~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 183 LCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred EcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccc
Confidence 778899999999 887663322 11121 223345443 44555566788999986542 2222221
Q ss_pred ----CCCCceeEecCCCCcEEEEec---------CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEEec-CC
Q 018784 227 ----PCNTESASLEPKLGNIFIAGG---------EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYASGS-ED 291 (350)
Q Consensus 227 ----~~~~~~~~~~~~~~~~l~sg~---------~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~lasgs-~D 291 (350)
+.......+.++.++++++.. ..+.|.++|+.+++.+..+.. ....++++|+|||+ +++++. .+
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCC
Confidence 111122445554445555443 235799999999999887753 23589999999999 677777 58
Q ss_pred CcEEEecCCCCCccc
Q 018784 292 GTIRIWQTNPPNHEE 306 (350)
Q Consensus 292 g~v~vw~~~~~~~~~ 306 (350)
+.|.++|..+.+...
T Consensus 341 ~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQ 355 (373)
T ss_pred CeEEEEECCCCCEEe
Confidence 999999987766543
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=6.9e-13 Score=117.77 Aligned_cols=229 Identities=10% Similarity=0.029 Sum_probs=156.5
Q ss_pred eeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCC----CeEEE
Q 018784 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKL 87 (350)
Q Consensus 12 ~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D----g~v~v 87 (350)
+.+|...+.+++|+| +|++++++..++.|.+||..+++....+..+...+.++++++++.++++...+ +.|.+
T Consensus 40 ~~~~~~~~~~~~~~~---~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDR---QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EeccCccccCcEECC---CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 345666778888875 89988899999999999998888765554567889999999999988887776 78999
Q ss_pred eeCCCCCeeeeee---ccccEeEEEEcCCCCeEEEeeC------CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCC
Q 018784 88 WDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (350)
Q Consensus 88 Wd~~~~~~~~~~~---h~~~V~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (350)
||..++.....+. +...+..++++|+++++++... .+.|..+|..... ..........+..++|.+++.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCC
Confidence 9988776543332 3456899999999988776653 2445555544322 122222233467888887666
Q ss_pred cEEEEEeCCCeEEEEECCC-CceeEe--------ecCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCC
Q 018784 159 TILSSCTDSGGVRLWDARS-GKIVQT--------LETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC 228 (350)
Q Consensus 159 ~~~~s~~~dg~i~iwd~~~-~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~ 228 (350)
.++++...++.|.+||+++ ++.+.. +.....+..++++++|+++++. .++.|.+||.. .+.+..+..+.
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 273 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPG 273 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCC
Confidence 6777777778999999964 332221 1122357789999999887765 45789999984 55555555543
Q ss_pred -------CCceeEecCCCCcEEEEec
Q 018784 229 -------NTESASLEPKLGNIFIAGG 247 (350)
Q Consensus 229 -------~~~~~~~~~~~~~~l~sg~ 247 (350)
....+.+.+ +++.|..++
T Consensus 274 ~~~g~~~~~~~~~~~~-dg~~L~v~~ 298 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIP-GTNQLIICS 298 (333)
T ss_dssp GGGTCSCBCCEEEECT-TSCEEEEEE
T ss_pred CccccccCcceEEECC-CCCEEEEEe
Confidence 244555654 344444333
No 191
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=1e-13 Score=124.43 Aligned_cols=269 Identities=15% Similarity=0.136 Sum_probs=183.0
Q ss_pred CCccEEEEEeC-----CCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee----------CCCeEEEeeCCCC
Q 018784 29 PDGFFLVSASK-----DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (350)
Q Consensus 29 ~dg~~lasgs~-----d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s----------~Dg~v~vWd~~~~ 93 (350)
|+++.+..... ++.|.+.|..+++.+.++..-..+ . ++++|++++++.+. .+++|.+||..+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 68877766654 678999999999999988754455 4 89999999776654 4688999999999
Q ss_pred Ceeeeeecc--------ccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 94 ~~~~~~~h~--------~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
+....+.-. .....++|+|+|++++++.. ++.|.++|+.+.+....... .+. ....|.+.+.+++
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g~---~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PDC---YHIFPTAPDTFFM 194 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSE---EEEEEEETTEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CCc---ceeecCCCceeEE
Confidence 877766422 24567999999999988764 68999999986543322211 111 1223445555556
Q ss_pred EeCCCeEEEEECCC-CceeEeecC-----CCCe-EEEEEe-cCCcEEEEEcCCcEEEEECCCcc--eeeeeec-------
Q 018784 164 CTDSGGVRLWDARS-GKIVQTLET-----KSPV-TSAEVS-RDGRYITTADGSSVKFWDANHFG--LVKGYNM------- 226 (350)
Q Consensus 164 ~~~dg~i~iwd~~~-~~~~~~~~~-----~~~v-~~~~~~-~~~~~l~~~~~~~i~vwd~~~~~--~~~~~~~------- 226 (350)
.+.||++.+.++.+ ++....... ..++ ....|. ++|+++..+.++.|.+.|+.+.. .+.....
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 67789999999976 665322211 1122 123454 78888777888999999986543 3333321
Q ss_pred ----CCCCceeEecCCCCcEEEEecC---------CCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEE-ecCC
Q 018784 227 ----PCNTESASLEPKLGNIFIAGGE---------DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYAS-GSED 291 (350)
Q Consensus 227 ----~~~~~~~~~~~~~~~~l~sg~~---------d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~las-gs~D 291 (350)
+.......+.+..++++++-.. .+.|.++|+.+++.+..+..- ..+++|+|+||++ +|++ ...+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCC
Confidence 1222334555555566665321 257999999999988776521 2588999999986 5554 5568
Q ss_pred CcEEEecCCCCCcc
Q 018784 292 GTIRIWQTNPPNHE 305 (350)
Q Consensus 292 g~v~vw~~~~~~~~ 305 (350)
+.|.++|..+.+..
T Consensus 354 ~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 354 KTLYIHDAESGEEL 367 (386)
T ss_dssp TEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEE
Confidence 99999998766544
No 192
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=1.5e-13 Score=119.44 Aligned_cols=196 Identities=12% Similarity=0.213 Sum_probs=145.0
Q ss_pred ccCCceeEEEecccCCCccEEEEEeC-CCCeeEeeCCCCceeeecc-CccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~-d~~v~iw~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
+|...+.++++++ ++|.++++... ++.|++|+ .+++.+..+. .+...+..+++++++.++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~--~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVR--NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEET--TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEc--CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 4556788888842 37877777643 88999999 5677776664 345678999999999999988889999999964
Q ss_pred CCCeeeeee---ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCC--CCcEEEEEEeCCCCcEEEEEeC
Q 018784 92 TGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 92 ~~~~~~~~~---h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
++....+. +...+..++++|+++++++...++.|++||... .. ....... ...+..+++.+ ++.++++...
T Consensus 151 -g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~-~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~ 226 (286)
T 1q7f_A 151 -GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QY-LRQIGGEGITNYPIGVGINS-NGEILIADNH 226 (286)
T ss_dssp -SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CE-EEEESCTTTSCSEEEEEECT-TCCEEEEECS
T ss_pred -CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CE-EEEEccCCccCCCcEEEECC-CCCEEEEeCC
Confidence 45555543 335689999999999888888899999999753 21 1222221 25678888876 4567777777
Q ss_pred CC-eEEEEECCCCceeEeecCC---CCeEEEEEecCCcEEEEEcCCcEEEEECCC
Q 018784 167 SG-GVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTADGSSVKFWDANH 217 (350)
Q Consensus 167 dg-~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~ 217 (350)
++ .|.+||. +++.+..+... ..+..++++|+|+++++..++.|++|+...
T Consensus 227 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 227 NNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp SSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 75 9999995 56666655432 236789999999988887788999998754
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=1.4e-11 Score=107.23 Aligned_cols=271 Identities=8% Similarity=-0.003 Sum_probs=184.8
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceee-eccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
.....+.++++++ +|.+.++...++.|.+++.. ++... .+..+...+..+++++++.+.++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~---~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSE---DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECC---CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 3456788898876 89888887788999999987 66543 334445678999999999988887778999999987
Q ss_pred CCeeee-ee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 93 GDEKHS-FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 93 ~~~~~~-~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
++.... +. ....+.++++.+++.+.++...++.|..||.. +.............+..+++.+ ++.++++...++.|
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSI 169 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeE
Confidence 544322 11 23568999999999988877778899999876 3322111222345677888765 45577776667899
Q ss_pred EEEECCCCceeEee-c-CCCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecC---CCCceeEecCCCCcEEE
Q 018784 171 RLWDARSGKIVQTL-E-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFI 244 (350)
Q Consensus 171 ~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 244 (350)
..+|. +++..... . ....+..++++++++++++.. .+.|.+||. +.... .+..+ ..+..+.+.+ ++++++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~-~g~l~v 245 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-EYDIPTPNARPHAITAGK-NSEIWF 245 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECS-TTCEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-EEECCCCCCCceEEEECC-CCCEEE
Confidence 99998 55543321 1 234578899999998877765 457999998 33322 22222 1223344444 477888
Q ss_pred EecCCCeEEEEEcccCeeEE-eecCCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 245 AGGEDMWVHVFDFHTGEQIG-CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 245 sg~~d~~i~v~d~~~~~~~~-~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
+...++.|..||. +++... .+......+.++++.++|.++++.. . .|..++
T Consensus 246 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 246 TEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp EETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred eccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 8777899999998 454332 2333455688999999998777665 4 566555
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=3.8e-14 Score=138.89 Aligned_cols=238 Identities=10% Similarity=-0.055 Sum_probs=152.0
Q ss_pred ccCCceeEEEecccCCCccEEE-----EEeCCCCeeEeeCCCCceeeeccCccCCe--EEEEECCCCcEEEEeeCCCe--
Q 018784 14 GHSRPVVDLFYSPITPDGFFLV-----SASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDANALFSASGSADFT-- 84 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~la-----sgs~d~~v~iw~~~~~~~~~~l~gH~~~V--~~v~~~~~~~~l~s~s~Dg~-- 84 (350)
+|+..+..+.||| ||++|| +|+.+.+|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SP---DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSW---DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECT---TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECC---CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 5666788888875 999998 56666789999999998751 1122222 56799999999999988877
Q ss_pred -----------EEEeeCCCCCe--eeeee---ccccEeEEEEcCCCCeEEEeeCCC----eEEEEECCCCCCCCeeecCC
Q 018784 85 -----------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGFEK----ILRIFDLNRPDAPPREVGNS 144 (350)
Q Consensus 85 -----------v~vWd~~~~~~--~~~~~---h~~~V~~~~~~~~~~~l~sg~~d~----~v~vwd~~~~~~~~~~~~~~ 144 (350)
|++|++.++.. ...+. +...+..+.|+|+|++|+..+.++ .|.+|+...+ ....+..+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~ 270 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRLLVKG 270 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEEEEEC
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEEeecC
Confidence 99999988763 22222 445788999999999998877665 5666655332 23333334
Q ss_pred CCcEEEEEEeCCCCcEEEEEe---CCCeEEEEECCCCce---eEeecC--CCCeEEEEEecCCcEEEE-EcCCcEEEEEC
Q 018784 145 SGSIRTVAWLHSDQTILSSCT---DSGGVRLWDARSGKI---VQTLET--KSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (350)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~s~~---~dg~i~iwd~~~~~~---~~~~~~--~~~v~~~~~~~~~~~l~~-~~~~~i~vwd~ 215 (350)
...+....+ ++++ +++... .++.|.+||+.+++. ...+.. ...+..+.++ ++.++++ ..++..++|..
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 444555555 4555 666554 257899999987753 222322 3357778887 5555554 45676666644
Q ss_pred C-CcceeeeeecCCCC--ceeEecCCCCcEEE-E---ecCCCeEEEEEcccCee
Q 018784 216 N-HFGLVKGYNMPCNT--ESASLEPKLGNIFI-A---GGEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 216 ~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~-s---g~~d~~i~v~d~~~~~~ 262 (350)
. .++..+.+..+... ....+.+ ++..++ + ....++|++||+.+++.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3 23344444443221 2233444 344444 3 33457899999988764
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.3e-12 Score=114.85 Aligned_cols=239 Identities=13% Similarity=0.133 Sum_probs=152.6
Q ss_pred ccCCceeEEEecccCCCccEEEE-------EeCCCCeeEeeCCCCceeeecc----CccCCeEEEEECCC-CcEEEEeeC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVS-------ASKDSSPMLRNGETGDWIGTFE----GHKGAVWSCCLDAN-ALFSASGSA 81 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~las-------gs~d~~v~iw~~~~~~~~~~l~----gH~~~V~~v~~~~~-~~~l~s~s~ 81 (350)
+......+++|++ +|.++++ ++.++.|.+|+..+++...... ++...+..++++++ +.++++..
T Consensus 15 ~~~~~~~~~~~~~---~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 15 EDIPGAEGPVFDK---NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp CCCTTCEEEEECT---TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred ccCCCccCceECC---CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 3344567888875 8888888 6778999999988887653222 36677899999999 87766654
Q ss_pred CCeEEEeeCCCCCeeee-ee-----ccccEeEEEEcCCCCeEEEeeCC---------------CeEEEEECCCCCCCCee
Q 018784 82 DFTAKLWDALTGDEKHS-FE-----HKHIVRACAFSEDTHLLLTGGFE---------------KILRIFDLNRPDAPPRE 140 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~-~~-----h~~~V~~~~~~~~~~~l~sg~~d---------------~~v~vwd~~~~~~~~~~ 140 (350)
...|.+||.. ++.... .. ....+.++++.+++++.++...+ +.|..|+.. +. ...
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~ 166 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQ 166 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC--EEE
Confidence 3478899987 654433 22 12357899999999887776655 456666654 22 112
Q ss_pred ecCCCCcEEEEEEe----CCCCcEEEEEeCCCeEEEEECC-CCce-----eEeecCC--CCeEEEEEecCCcEEEEEcCC
Q 018784 141 VGNSSGSIRTVAWL----HSDQTILSSCTDSGGVRLWDAR-SGKI-----VQTLETK--SPVTSAEVSRDGRYITTADGS 208 (350)
Q Consensus 141 ~~~~~~~v~~~~~~----~~~~~~~~s~~~dg~i~iwd~~-~~~~-----~~~~~~~--~~v~~~~~~~~~~~l~~~~~~ 208 (350)
..........+++. ++++.++++...++.|.+||+. +++. ...+... .....++++++|
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G--------- 237 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN--------- 237 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC---------
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC---------
Confidence 22222345677887 6555666776677899999975 3331 1111111 223334444444
Q ss_pred cEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEE
Q 018784 209 SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYAS 287 (350)
Q Consensus 209 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~las 287 (350)
+++++...++.|.+||..+++.+..+..+...+.+++|+|+++ ++++
T Consensus 238 --------------------------------~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 238 --------------------------------NLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp --------------------------------CEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred --------------------------------CEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 4444444455566666554544444444556789999999998 5566
Q ss_pred ecCCCcEEEecCCC
Q 018784 288 GSEDGTIRIWQTNP 301 (350)
Q Consensus 288 gs~Dg~v~vw~~~~ 301 (350)
...++.|..|+...
T Consensus 286 ~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 286 EHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTTEEEEEECSS
T ss_pred eCCCCeEEEEeCCC
Confidence 67778999998754
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=5.3e-13 Score=131.70 Aligned_cols=273 Identities=12% Similarity=0.032 Sum_probs=167.6
Q ss_pred CCccEEEEEeCCCC---eeEeeC--C---CCceeee-----c-cCccCCeEEEEECCCCcEEEEeeCC-----CeEEEee
Q 018784 29 PDGFFLVSASKDSS---PMLRNG--E---TGDWIGT-----F-EGHKGAVWSCCLDANALFSASGSAD-----FTAKLWD 89 (350)
Q Consensus 29 ~dg~~lasgs~d~~---v~iw~~--~---~~~~~~~-----l-~gH~~~V~~v~~~~~~~~l~s~s~D-----g~v~vWd 89 (350)
|||++++-...++. -.||.. . .++.... + .+|...+..++|+|||+++|.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 68888877665544 455653 2 3333221 1 3454567889999999988866544 4699999
Q ss_pred CCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCe--------------EEEEECCCCCCCCeeec---CCCCcEEEEE
Q 018784 90 ALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI--------------LRIFDLNRPDAPPREVG---NSSGSIRTVA 152 (350)
Q Consensus 90 ~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~--------------v~vwd~~~~~~~~~~~~---~~~~~v~~~~ 152 (350)
+.+++.+....+...+..++|+|+ +.|+.++.++. |.+|++.++........ .+...+..+.
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 999886543222222357899999 88888776554 88999875542212221 2223578888
Q ss_pred EeCCCCcEEEEEeC----CCeEEEEECCCC--ceeEeec-CCCCeEEEEEecCCcEEEE-Ec----CCcEEEEECCCcc-
Q 018784 153 WLHSDQTILSSCTD----SGGVRLWDARSG--KIVQTLE-TKSPVTSAEVSRDGRYITT-AD----GSSVKFWDANHFG- 219 (350)
Q Consensus 153 ~~~~~~~~~~s~~~----dg~i~iwd~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~----~~~i~vwd~~~~~- 219 (350)
|++++..++++... ...|++||+.++ ++...+. ........ +.|+|+.|+. ++ ...|.+||+.+..
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSC
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcc
Confidence 98766666655543 348999999876 4133443 33333333 3577776543 33 2459999987742
Q ss_pred eeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcc-cCeeEEeecC-CCcCEEEEEEcCCCCEEE----EecCCCc
Q 018784 220 LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH-TGEQIGCNKG-HHGPVHCVRFSPGGESYA----SGSEDGT 293 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~-~~~~~~~~~~-h~~~v~~l~~sp~~~~la----sgs~Dg~ 293 (350)
..+.+..........+....+.++++...|+..+||.+. ++.....+.. +.+.|..++++|+++.|+ +....++
T Consensus 354 ~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 433 (741)
T 1yr2_A 354 RFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPAT 433 (741)
T ss_dssp EEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEE
T ss_pred ccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 222222111111112222246788888889987777654 4555555654 366789999999987655 3345688
Q ss_pred EEEecCCCCC
Q 018784 294 IRIWQTNPPN 303 (350)
Q Consensus 294 v~vw~~~~~~ 303 (350)
|++||+...+
T Consensus 434 i~~~d~~tg~ 443 (741)
T 1yr2_A 434 VLALDPATAK 443 (741)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999987654
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.56 E-value=7.5e-13 Score=118.10 Aligned_cols=231 Identities=11% Similarity=0.040 Sum_probs=140.7
Q ss_pred ceeEEEecccCCCccEEEEEeCCC---C--eeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCC----------
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDS---S--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---------- 82 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~---~--v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D---------- 82 (350)
.+..+.|+| ||+.||..+.++ . +.+|++.+++.......+ . +..++|+|+++.++.++.+
T Consensus 60 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISP---DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECT---TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECC---CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 455666665 999998887643 3 777888888766544433 3 8999999999988877642
Q ss_pred -----------------CeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCC-------eEEEEECCCCCCCC
Q 018784 83 -----------------FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK-------ILRIFDLNRPDAPP 138 (350)
Q Consensus 83 -----------------g~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~-------~v~vwd~~~~~~~~ 138 (350)
..|.+||+.+++.+..+... .+..++|+|++ +++++..+. ...+|.+.++. .
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~ 210 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--E 210 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--E
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--e
Confidence 57999999887663333334 78899999999 777776542 44555544222 2
Q ss_pred eeecCCCCcEEEEEEeCCCCcEEEEEeCC-------CeEEEEECCCCceeEeecC-CCCeEE-EEEecCCcEEE-EEcCC
Q 018784 139 REVGNSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDARSGKIVQTLET-KSPVTS-AEVSRDGRYIT-TADGS 208 (350)
Q Consensus 139 ~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-------g~i~iwd~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~-~~~~~ 208 (350)
..+..+ ..+..+ ++++..+++.+..+ ..|.+|| +++....... ...+.. +.|+ ++ +++ +..++
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 222222 444444 55555555554332 4688888 5554433333 345665 8898 88 554 45678
Q ss_pred cEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeE-EEEEcccCeeEEeecCCC
Q 018784 209 SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWV-HVFDFHTGEQIGCNKGHH 270 (350)
Q Consensus 209 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i-~v~d~~~~~~~~~~~~h~ 270 (350)
.+++| +.+++...............+.+ .++++++.++.. ++|.+. ++ ...+..|.
T Consensus 284 ~~~l~-~~~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp EEEEE-EESSSEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES-SS-EEECCCTT
T ss_pred cEEEE-EcCCceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC-Cc-EEEecccc
Confidence 89999 76444332222222223344544 577777666654 677665 44 33444443
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=8.4e-11 Score=102.11 Aligned_cols=235 Identities=8% Similarity=-0.000 Sum_probs=165.1
Q ss_pred ccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee--eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCC
Q 018784 57 FEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF--EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP 134 (350)
Q Consensus 57 l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~--~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 134 (350)
+..+...+.++++++++.++++...++.|.+||.. +...... .+...+.++++.+++.+.++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 45556788999999999998887778999999987 5433222 134678999999999988887778899999875 2
Q ss_pred CCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee-c-CCCCeEEEEEecCCcEEEEEc-CCcEE
Q 018784 135 DAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-E-TKSPVTSAEVSRDGRYITTAD-GSSVK 211 (350)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~-~~~i~ 211 (350)
.............+..+++.+ ++.++++...++.|..||. +++..... . ....+..+++.++++++++.. ++.|.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 211111112345677888765 5567777667789999998 55543322 2 235678899999998887765 57899
Q ss_pred EEECCCcceeeeeecCC---CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe-ecCCCcCEEEEEEcCCCCEEEE
Q 018784 212 FWDANHFGLVKGYNMPC---NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC-NKGHHGPVHCVRFSPGGESYAS 287 (350)
Q Consensus 212 vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~sp~~~~las 287 (350)
.||. +.... .+..+. ....+.+.+ +++++++...++.|.+||. +++.... ...+...+.++++.++|.++++
T Consensus 166 ~~~~-~g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 166 RITE-SGDIT-EFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EECT-TCCEE-EEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEcC-CCcEE-EeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe
Confidence 9998 44433 222221 223344444 4778888777889999999 6654332 3345567999999999998887
Q ss_pred ecCCCcEEEecC
Q 018784 288 GSEDGTIRIWQT 299 (350)
Q Consensus 288 gs~Dg~v~vw~~ 299 (350)
...++.|..|+.
T Consensus 242 ~~~~~~i~~~d~ 253 (299)
T 2z2n_A 242 EWGANKIGRLTS 253 (299)
T ss_dssp ETTTTEEEEEET
T ss_pred ccCCceEEEECC
Confidence 777889999986
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.52 E-value=3.1e-12 Score=125.62 Aligned_cols=232 Identities=12% Similarity=0.041 Sum_probs=139.5
Q ss_pred CCccEEEEEeCCC-C--eeEee--CCCCceeeec------cCccCCeEEEEECCCCcEEEEeeCCC-----eEEEeeCCC
Q 018784 29 PDGFFLVSASKDS-S--PMLRN--GETGDWIGTF------EGHKGAVWSCCLDANALFSASGSADF-----TAKLWDALT 92 (350)
Q Consensus 29 ~dg~~lasgs~d~-~--v~iw~--~~~~~~~~~l------~gH~~~V~~v~~~~~~~~l~s~s~Dg-----~v~vWd~~~ 92 (350)
|+|++++-...++ . -.||- ...++....+ ++|...+..++|+|||+++|.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 5787766554332 1 13444 3344432111 34555788999999999888655443 899999998
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCe----------------EEEEECCCCCCCCeee---cCCCCcEEEEEE
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI----------------LRIFDLNRPDAPPREV---GNSSGSIRTVAW 153 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~----------------v~vwd~~~~~~~~~~~---~~~~~~v~~~~~ 153 (350)
++..........+..++|+||++.|+.++.++. |++|++.++....... ..+...+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 876553222223678999999999998887766 9999997654221222 223445778899
Q ss_pred eCCCCcEEEEEeC----CCeEEEEECCC------Cc-eeEeecCC-CCeEEEEEecCCcEEEEE-cCCcEEEEECCCcce
Q 018784 154 LHSDQTILSSCTD----SGGVRLWDARS------GK-IVQTLETK-SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGL 220 (350)
Q Consensus 154 ~~~~~~~~~s~~~----dg~i~iwd~~~------~~-~~~~~~~~-~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~ 220 (350)
+++++.++++... +..|.+||+.+ +. ....+..+ .... ..++++|..++.. +.+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~------------ 307 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH------------ 307 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT------------
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC------------
Confidence 8877766665542 56899999876 42 23333322 2222 2355555443221 100
Q ss_pred eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe--eEEeecCCCc--CEEEEEEcCCCCEEEEecCCCcE--
Q 018784 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE--QIGCNKGHHG--PVHCVRFSPGGESYASGSEDGTI-- 294 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~--~~~~~~~h~~--~v~~l~~sp~~~~lasgs~Dg~v-- 294 (350)
.....|.+||+.++. ....+..|.. .+..++|++++.++++...|+..
T Consensus 308 --------------------------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l 361 (710)
T 2xdw_A 308 --------------------------SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL 361 (710)
T ss_dssp --------------------------CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred --------------------------CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEE
Confidence 012345566665543 1233334433 57788998888888999999865
Q ss_pred EEecC
Q 018784 295 RIWQT 299 (350)
Q Consensus 295 ~vw~~ 299 (350)
++|++
T Consensus 362 ~~~~~ 366 (710)
T 2xdw_A 362 QLHDL 366 (710)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 45555
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=2.5e-11 Score=111.20 Aligned_cols=249 Identities=12% Similarity=0.044 Sum_probs=154.3
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCC--eEEEeeCCCCC
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADF--TAKLWDALTGD 94 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg--~v~vWd~~~~~ 94 (350)
.....|+|++ +|+++++...++.|++||.++++.......... .. +++++++..++.+..++ .|.+|+...+.
T Consensus 131 ~~P~~la~d~---~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVG---NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECS---TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeC---CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 4567888875 899888888889999999988877655544322 33 89999999888887766 78889887665
Q ss_pred eeeee----e-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCee---ecCCCCcE-E-EEEEeCCCCcEEEEE
Q 018784 95 EKHSF----E-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE---VGNSSGSI-R-TVAWLHSDQTILSSC 164 (350)
Q Consensus 95 ~~~~~----~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~---~~~~~~~v-~-~~~~~~~~~~~~~s~ 164 (350)
....+ . ....+.+++++|++..|+.+..++.|..||+......... ........ . .+++.+.++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 43333 2 3456789999995555655777889999998754321110 11111111 3 788887778888888
Q ss_pred eCCCeEEEEECCCCceeEeecCC---------------CCeEEEEEecCCcEEEEEc--CCcEEEEECCCcceeeeeecC
Q 018784 165 TDSGGVRLWDARSGKIVQTLETK---------------SPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGLVKGYNMP 227 (350)
Q Consensus 165 ~~dg~i~iwd~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~~~~~~~~~~~ 227 (350)
...+.|+.||.... ........ .....++++++|+++++.. ++.|+.||+.++.. ..+...
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 88889999987533 21111110 2245566666666544433 34566665433221 111000
Q ss_pred CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 228 CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
... .|..|+ . .....-.....+++.|++.++++-..+++|+.+.+
T Consensus 364 ~~~--------------~g~~~g----------~---~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDV--------------ASQIDG----------T---PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTC--------------BSCCCB----------S---TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCC--------------CCcCCC----------C---hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 000 000000 0 00011245889999999999999999999988754
No 201
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.49 E-value=7.2e-12 Score=114.37 Aligned_cols=270 Identities=16% Similarity=0.123 Sum_probs=178.2
Q ss_pred CCccEEEEEeC-C----CCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee----------CCCeEEEeeCCCC
Q 018784 29 PDGFFLVSASK-D----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (350)
Q Consensus 29 ~dg~~lasgs~-d----~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s----------~Dg~v~vWd~~~~ 93 (350)
++++.+..... + ++|.+.|..+++.+.++.--..+ .++++||+++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 45654444433 3 68999999999999988754455 789999998776664 4789999999999
Q ss_pred Ceeeeeecc--------ccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 94 ~~~~~~~h~--------~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
+....+.-. .....++|+|++++|+++.. ++.|.+.|+.+.+....... .+. ....+.+...+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~---~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDC---YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSE---EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCc---eeeccCCCcEEEE
Confidence 877665422 23567899999999998864 58899999986543322211 111 2223344456666
Q ss_pred EeCCCeEEEEECCCCceeEe----ecCC-CC-eEEEEEecCCcE-EEEEcCCcEEEEECCCcce--eeeeec--------
Q 018784 164 CTDSGGVRLWDARSGKIVQT----LETK-SP-VTSAEVSRDGRY-ITTADGSSVKFWDANHFGL--VKGYNM-------- 226 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~~~~----~~~~-~~-v~~~~~~~~~~~-l~~~~~~~i~vwd~~~~~~--~~~~~~-------- 226 (350)
...||++.+.+..+++.... +... .+ ...+.+.+++.. ++....+.+.+.|...... +..+..
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 67788988888866665432 1111 11 123456777654 4455667899999864332 122211
Q ss_pred ---CCCCceeEecCCCCcEEEEec---------CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEEec-CCC
Q 018784 227 ---PCNTESASLEPKLGNIFIAGG---------EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYASGS-EDG 292 (350)
Q Consensus 227 ---~~~~~~~~~~~~~~~~l~sg~---------~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~lasgs-~Dg 292 (350)
+.......+.+..++++++.. ..+.|.++|+.+++.+.++..- ...+.+.|+||++ ++++.. .++
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTT
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCC
Confidence 111122455555455566543 1357999999999988877522 2478999999998 777777 599
Q ss_pred cEEEecCCCCCccc
Q 018784 293 TIRIWQTNPPNHEE 306 (350)
Q Consensus 293 ~v~vw~~~~~~~~~ 306 (350)
.|.++|+.+.+...
T Consensus 394 ~VsVID~~t~kvv~ 407 (426)
T 3c75_H 394 TLHIYDAATGEELR 407 (426)
T ss_dssp EEEEEETTTCCEEE
T ss_pred eEEEEECCCCCEEE
Confidence 99999998776553
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.44 E-value=2.5e-11 Score=109.02 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=164.1
Q ss_pred EEecccCCCccEEEEEe----------CCCCeeEeeCCCCceeeeccCcc-------CCeEEEEECCCCcEEEEeeC--C
Q 018784 22 LFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDANALFSASGSA--D 82 (350)
Q Consensus 22 ~~~~~~s~dg~~lasgs----------~d~~v~iw~~~~~~~~~~l~gH~-------~~V~~v~~~~~~~~l~s~s~--D 82 (350)
++++| ||++|..++ .++.|.+||..+.+.+.++.-.. ..-..+++++||+++..+.. +
T Consensus 83 va~sp---DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 83 PVVAD---DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred EEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 77775 998876665 36789999999999988774211 12345789999998777653 6
Q ss_pred CeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeee----cCCCCcEE-EEEEeCCC
Q 018784 83 FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV----GNSSGSIR-TVAWLHSD 157 (350)
Q Consensus 83 g~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~----~~~~~~v~-~~~~~~~~ 157 (350)
++|.++|+.+++.+.++.-.+. ...+......+++.+.||.+.+.++.......... ......+. ...|...+
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT
T ss_pred CeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC
Confidence 8999999999988877754432 12232234556677778888888876422211100 00011111 13455556
Q ss_pred CcEEEEEeCCCeEEEEECCCCc--eeEeec-----------CCCCeEEEEEecCCcEEEEEc-----------CCcEEEE
Q 018784 158 QTILSSCTDSGGVRLWDARSGK--IVQTLE-----------TKSPVTSAEVSRDGRYITTAD-----------GSSVKFW 213 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~--~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~-----------~~~i~vw 213 (350)
++++.. +.+|+|.+.|+.++. .+..+. .......+.++++++.+.... ...|.++
T Consensus 238 G~~~~v-s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 238 GRLVWP-TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TEEEEE-BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CcEEEE-eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 665554 446899999997664 332222 012334577788887665432 2469999
Q ss_pred ECCCcceeeeeecCCCCceeEecCCCC-cEEEEecCCCeEEEEEcccCeeEEeec--CCCcCEEEEEEcCC
Q 018784 214 DANHFGLVKGYNMPCNTESASLEPKLG-NIFIAGGEDMWVHVFDFHTGEQIGCNK--GHHGPVHCVRFSPG 281 (350)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~d~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~sp~ 281 (350)
|+.+++.++.+........+.+.++.. .++++...++.|.++|..+++.+.++. +|. ..|.+++|
T Consensus 317 D~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p---~~l~~s~d 384 (386)
T 3sjl_D 317 DAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG---PQVITTAD 384 (386)
T ss_dssp ETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS---CCEEEECC
T ss_pred ECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC---ceeEECCc
Confidence 999999999888776666777877543 345556679999999999999988775 343 44556655
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=1.3e-11 Score=121.67 Aligned_cols=243 Identities=10% Similarity=-0.005 Sum_probs=144.3
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCC-----CCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCe---
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT--- 84 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d-----~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~--- 84 (350)
.+|+..+..+.||| ||++||.++.+ .+|++||+.+++.+.. ..+...+..++|+|| +.|+.++.|+.
T Consensus 159 ~~~~~~~~~~~~SP---DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 159 KDGATALDAWAASD---DGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp ----EEEEEEEECT---TSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred cCCCEEEEeEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 34545667777775 99999887654 4599999999988653 112222346789999 88887777654
Q ss_pred -----------EEEeeCCCCCe--eeeee---ccccEeEEEEcCCCCeEEEeeCCC-----eEEEEECCCCCCC-Ceeec
Q 018784 85 -----------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGFEK-----ILRIFDLNRPDAP-PREVG 142 (350)
Q Consensus 85 -----------v~vWd~~~~~~--~~~~~---h~~~V~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~-~~~~~ 142 (350)
|++|++.++.. ...+. +...+..+.|+|+|++|+..+.++ .|.+||+.++... ...+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 89999877652 22332 223588999999999888776543 8999998765212 23333
Q ss_pred CCCCcEEEEEEeCCCCcEEEEEeC---CCeEEEEECCCC--ceeEeecCC-CCeEEEEEecCCcEEEE-EcCCcEEEEEC
Q 018784 143 NSSGSIRTVAWLHSDQTILSSCTD---SGGVRLWDARSG--KIVQTLETK-SPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (350)
Q Consensus 143 ~~~~~v~~~~~~~~~~~~~~s~~~---dg~i~iwd~~~~--~~~~~~~~~-~~v~~~~~~~~~~~l~~-~~~~~i~vwd~ 215 (350)
.+........ .+.++.+++.... ++.|.+||+.++ +....+... ..+..+.+. ++.++++ ..++..++|..
T Consensus 314 ~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 314 PDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 3333334443 3555555555432 346999999875 222233332 335566776 4455444 45666555543
Q ss_pred C-CcceeeeeecCCCC--ceeEecCCCCcEEEEe---cCCCeEEEEEcccCee
Q 018784 216 N-HFGLVKGYNMPCNT--ESASLEPKLGNIFIAG---GEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 216 ~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~sg---~~d~~i~v~d~~~~~~ 262 (350)
. .++..+.+..+... ....+.+....++++. ...++|++||+.+++.
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 2 23444444443222 2334444333344333 3457899999988763
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=2.1e-09 Score=93.28 Aligned_cols=234 Identities=11% Similarity=-0.004 Sum_probs=162.7
Q ss_pred cCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee-ee-ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCC
Q 018784 58 EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS-FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPD 135 (350)
Q Consensus 58 ~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~-~~-h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 135 (350)
........++++++++.+.++...++.|.+||.. ++.... +. ....+.++++.+++.+.++...++.|..||.. +.
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 3445678899999999998888888999999987 543321 21 23568999999999888877778899999976 33
Q ss_pred CCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEe-ec-CCCCeEEEEEecCCcEEEEEc-CCcEEE
Q 018784 136 APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKF 212 (350)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~v 212 (350)
............+..+++.+ ++.++++...++.|..+|.. ++.... +. ....+..+++.++++++++.. ++.|..
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred eEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 22111122335678888764 55677776667899999987 654422 22 235678899999999777665 568999
Q ss_pred EECCCcceeeeeecCC---CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe-ecCCCcCEEEEEEcCCCCEEEEe
Q 018784 213 WDANHFGLVKGYNMPC---NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC-NKGHHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 213 wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~sp~~~~lasg 288 (350)
+|. +.... .+..+. ....+.+.+ +++++++....+.|.+||. +++.... +..+...+.++++.+++.++++.
T Consensus 172 ~~~-~g~~~-~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 172 ITN-TGKLE-EYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ECT-TCCEE-EEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred ECC-CCcEE-EeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 998 43332 233221 223344444 5788888777888999998 5544332 33455678999999999988887
Q ss_pred cCCCcEEEecC
Q 018784 289 SEDGTIRIWQT 299 (350)
Q Consensus 289 s~Dg~v~vw~~ 299 (350)
..++.|..|+.
T Consensus 248 ~~~~~i~~~~~ 258 (300)
T 2qc5_A 248 WGANQIGRITN 258 (300)
T ss_dssp TTTTEEEEECT
T ss_pred cCCCeEEEECC
Confidence 77889999986
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=8.6e-12 Score=112.38 Aligned_cols=144 Identities=14% Similarity=0.050 Sum_probs=106.8
Q ss_pred CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC-----------eeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEEC
Q 018784 63 AVWSCCLDANALFSASGSADFTAKLWDALTGD-----------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDL 131 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~-----------~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~ 131 (350)
++..+++++...++++|+.|+. ++|++.... ......++. |+.++| ++.+|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 6788999999999999999855 559854221 223456777 999999 88999988 8899999999
Q ss_pred CCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEE
Q 018784 132 NRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVK 211 (350)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~ 211 (350)
.+... ......+...+.++.+.++. ++.+..||+|.+||+.+++... ....+++++|+|+| ++++..++.++
T Consensus 114 ~sl~~-~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSE-FRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTC-EEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred hhhhc-cCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 76542 22334455668888777653 6777899999999999887643 23578999999998 45566677777
Q ss_pred EEECCCcc
Q 018784 212 FWDANHFG 219 (350)
Q Consensus 212 vwd~~~~~ 219 (350)
+|+.....
T Consensus 186 ~~~~~~~~ 193 (388)
T 1xip_A 186 SFAWRNGE 193 (388)
T ss_dssp EEEEETTE
T ss_pred EEcCCCcc
Confidence 77665443
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.42 E-value=1.1e-09 Score=98.95 Aligned_cols=236 Identities=11% Similarity=-0.024 Sum_probs=157.8
Q ss_pred EEEecccCCCccEEEEEe----------CCCCeeEeeCCCCceeeeccCc-------cCCeEEEEECCCCcEEEEeeC--
Q 018784 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs----------~d~~v~iw~~~~~~~~~~l~gH-------~~~V~~v~~~~~~~~l~s~s~-- 81 (350)
.+.|+| ||++|..+. .++++.++|..+.+.+.++.-- ...-..++++|++++|+.+..
T Consensus 70 ~i~~sp---Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAH---SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECC---CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 777776 999888875 3678999999988887765321 112347899999999888764
Q ss_pred CCeEEEeeCCCCCeeee-eeccccEeEEEEcCCC-CeEEEeeCCCeEEEEECCCCCCCCeee----cCCCCc-EEEEEEe
Q 018784 82 DFTAKLWDALTGDEKHS-FEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV----GNSSGS-IRTVAWL 154 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~-~~h~~~V~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~~~~----~~~~~~-v~~~~~~ 154 (350)
+.+|.++| .+++.... +..... +.+.|++ ..+++.+.|+.+.++|. .+....... ...... .....+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 58899999 99887766 654433 4455554 45566778999999998 543321110 011111 1223344
Q ss_pred CCCCcEEEEEeCCCeEEEEECCCCc--eeEeecC-----------CCCeEEEEEecCCcEEEEE-c----------CCcE
Q 018784 155 HSDQTILSSCTDSGGVRLWDARSGK--IVQTLET-----------KSPVTSAEVSRDGRYITTA-D----------GSSV 210 (350)
Q Consensus 155 ~~~~~~~~s~~~dg~i~iwd~~~~~--~~~~~~~-----------~~~v~~~~~~~~~~~l~~~-~----------~~~i 210 (350)
+.++.+++.. ..+.+.+.|+.++. .+..+.. ......+.++|+++.+... . ++.|
T Consensus 222 ~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 222 NKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred ecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence 5555555554 56789999987553 2222211 1224447788988765443 2 2479
Q ss_pred EEEECCCcceeeeeecCCCCceeEecCCCCc-EEEEec-CCCeEEEEEcccCeeEEee
Q 018784 211 KFWDANHFGLVKGYNMPCNTESASLEPKLGN-IFIAGG-EDMWVHVFDFHTGEQIGCN 266 (350)
Q Consensus 211 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~-~d~~i~v~d~~~~~~~~~~ 266 (350)
.++|+.+.+.++.+........+.+.++ ++ +++++. .++.|.+||+.+++.+..+
T Consensus 301 ~VID~~t~~vv~~i~~g~~p~~i~~s~D-g~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 301 TSVTGLVGQTSSQISLGHDVDAISVAQD-GGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEECCCCEEEEEEECCCCcCeEEECCC-CCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9999999999998887777778888875 55 666665 5899999999999988773
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.40 E-value=1.5e-11 Score=110.43 Aligned_cols=260 Identities=10% Similarity=-0.004 Sum_probs=170.2
Q ss_pred ccEEEEEeCCC----CeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEee----------CCCeEEEeeCCCCCee
Q 018784 31 GFFLVSASKDS----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTGDEK 96 (350)
Q Consensus 31 g~~lasgs~d~----~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s----------~Dg~v~vWd~~~~~~~ 96 (350)
.+..++...++ ++.+.|..+++.+.++..-..+ .+.++|++++++.+. .+++|.+||+.+++..
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 34556555566 6779999999999988654455 699999998777765 4789999999999988
Q ss_pred eeeecc--------ccEeEEEEcCCCCeEEEeeC--CCeEEE--EECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 97 HSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRI--FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 97 ~~~~h~--------~~V~~~~~~~~~~~l~sg~~--d~~v~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
..+.-. .....++|+|||++++++.. +..+.+ +|+.+ ...+.. .+. +...+.+...+++.
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v-~~~---~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKS-ASC---FHIHPGAAATHYLG 181 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEEC-SSC---CCCEEEETTEEECC
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEEC-CCc---eEEccCCCeEEEEE
Confidence 877532 34678999999999998864 467888 98864 122211 111 11233445556666
Q ss_pred eCCCeEEEEECCC-----CceeEe----ec-CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcc--eeeeeecC-----
Q 018784 165 TDSGGVRLWDARS-----GKIVQT----LE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFG--LVKGYNMP----- 227 (350)
Q Consensus 165 ~~dg~i~iwd~~~-----~~~~~~----~~-~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~--~~~~~~~~----- 227 (350)
+.|+++.+.|+.+ ++.... +. ...+. ....++.++.++. +.+.+.|..... .+..+.+.
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~ 257 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRK 257 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHH
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccc
Confidence 7788888889886 443311 11 12333 3333445566666 889999986432 22222211
Q ss_pred ------CCCceeEecCCCCcEEEEec-C-------CCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCC-EEEEec-CC
Q 018784 228 ------CNTESASLEPKLGNIFIAGG-E-------DMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGE-SYASGS-ED 291 (350)
Q Consensus 228 ------~~~~~~~~~~~~~~~l~sg~-~-------d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~-~lasgs-~D 291 (350)
.....+.+.++..+++++.. . ++.+.++|+.+++.+..+.... ..+.|+|+||++ ++++.. .+
T Consensus 258 ~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTT
T ss_pred ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCC
Confidence 11112446665445555433 2 2356699999999888775433 588999999997 566666 59
Q ss_pred CcEEEecCCCCCcc
Q 018784 292 GTIRIWQTNPPNHE 305 (350)
Q Consensus 292 g~v~vw~~~~~~~~ 305 (350)
+.|.++|+.+.+..
T Consensus 337 ~~VsVID~~t~kvv 350 (368)
T 1mda_H 337 EVLDIYDAASDQDQ 350 (368)
T ss_dssp TEEEEEESSSCEEE
T ss_pred CeEEEEECCCCcEE
Confidence 99999998765544
No 208
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=9.4e-11 Score=100.51 Aligned_cols=199 Identities=8% Similarity=-0.101 Sum_probs=138.8
Q ss_pred cCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC
Q 018784 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (350)
Q Consensus 15 H~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~ 94 (350)
+...+.++++++ +|+++++.. ++.|.+|+................+..+++++++.++++...++.|.+|+..+..
T Consensus 65 ~~~~p~~i~~~~---~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 65 GLYQPQGLAVDG---AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp SCCSCCCEEECT---TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS
T ss_pred CcCCcceeEECC---CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce
Confidence 334677888875 888777666 8889999987654432222333668899999999988888888999999865544
Q ss_pred eeeee-eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEE
Q 018784 95 EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (350)
Q Consensus 95 ~~~~~-~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iw 173 (350)
..... .....+.+++++++++++++...++.|.+||....... .........+..+++.+. +.++++...++.|.+|
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKL 218 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEE
T ss_pred eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE-eecccCCCCceEEEECCC-CCEEEEECCCCcEEEE
Confidence 33221 22345788999999997777777889999998653321 111122256788887654 4777777778899999
Q ss_pred ECCCCceeEeecC-CCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcc
Q 018784 174 DARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG 219 (350)
Q Consensus 174 d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~ 219 (350)
|............ ...+..++++++|+++++. .++.|+++++...+
T Consensus 219 ~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 219 LAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred cCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9876544332222 2467899999999877665 46789999876543
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.39 E-value=4.8e-11 Score=103.31 Aligned_cols=192 Identities=10% Similarity=0.070 Sum_probs=120.1
Q ss_pred CCcEEEEeeCCCeEEEeeCCCCCeeeeeecc--ccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEE
Q 018784 72 NALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIR 149 (350)
Q Consensus 72 ~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~--~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~ 149 (350)
.++++++++.|+.|.+||..+++.+..+... ..+.++++.|+|++++ +.++.|..||. +++............+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 4678899999999999999999988887643 3688999999999888 45778999998 45443333332234577
Q ss_pred EEEEeCCCCcEEEEEeC-CCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCC
Q 018784 150 TVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC 228 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~ 228 (350)
++.+.++++ ++++.+. ++.|..+|. +|+.+..+.....+. . .. .
T Consensus 81 ~~~~~~dG~-~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~--------------------------~-----~~--~ 125 (276)
T 3no2_A 81 TARILPDGN-ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE--------------------------R-----PH--A 125 (276)
T ss_dssp EEEECTTSC-EEEEEESTTEEEEEECT-TSCEEEEEEECCSCS--------------------------S-----GG--G
T ss_pred ccEECCCCC-EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC--------------------------c-----cc--c
Confidence 777776544 5555444 566666664 565554432110000 0 00 0
Q ss_pred CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCc
Q 018784 229 NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNH 304 (350)
Q Consensus 229 ~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 304 (350)
....+... .+++++++...++.|..||.. |+.+-.+... ..++++.+.+++.++++++.+++|..+|..+.+.
T Consensus 126 ~~~~v~~~-~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 126 QFRQINKN-KKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCSCCEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred cccCceEC-CCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 00011111 246677777777777777766 6666555433 3445566677777777777777777777654443
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=1.6e-10 Score=113.17 Aligned_cols=241 Identities=13% Similarity=0.064 Sum_probs=149.3
Q ss_pred cCccCCeEEEEECCCCcEEE-----EeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCC--------
Q 018784 58 EGHKGAVWSCCLDANALFSA-----SGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK-------- 124 (350)
Q Consensus 58 ~gH~~~V~~v~~~~~~~~l~-----s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~-------- 124 (350)
++|...+..++|+||++++| +|+.+..|++||+.+++.+...........++|+ |++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 34666788899999999877 3444478999999998855432111113577899 999888887764
Q ss_pred -----eEEEEECCCCCCCCeeecC----CCCcEEEEEEeCCCCcEEEEEeCC---CeEEEEECCCCc-eeEeecCC-CCe
Q 018784 125 -----ILRIFDLNRPDAPPREVGN----SSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGK-IVQTLETK-SPV 190 (350)
Q Consensus 125 -----~v~vwd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~d---g~i~iwd~~~~~-~~~~~~~~-~~v 190 (350)
.|++|++.++......+.. +......+.|++++..++++...+ +.|+++|+.++. ....+... ...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 3999998765432222222 233467888988777776665432 589999998763 33344332 233
Q ss_pred EEEEEecCCc-EEEEEc----CCcEEEEECCCcce--eeeeecCCCCceeEecCCCCcEEEE-ecCCC--eEEEEEcccC
Q 018784 191 TSAEVSRDGR-YITTAD----GSSVKFWDANHFGL--VKGYNMPCNTESASLEPKLGNIFIA-GGEDM--WVHVFDFHTG 260 (350)
Q Consensus 191 ~~~~~~~~~~-~l~~~~----~~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s-g~~d~--~i~v~d~~~~ 260 (350)
... +++++. +++.++ ...|..+|+.+... .+.+.-+..... .+.+. ++.|+. ...++ .|++||+..+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~-g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSG-SGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEE-TTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEE-CCEEEEEEEECCeeEEEEEECCCC
Confidence 333 556554 444443 25688999877543 122222222222 55554 444444 44454 6889998754
Q ss_pred eeEEeec-CCCcCEEEEEEcCCCCEEEEecCC----CcEEEecCCCCC
Q 018784 261 EQIGCNK-GHHGPVHCVRFSPGGESYASGSED----GTIRIWQTNPPN 303 (350)
Q Consensus 261 ~~~~~~~-~h~~~v~~l~~sp~~~~lasgs~D----g~v~vw~~~~~~ 303 (350)
.. ..+. ...+.+..+.++|++..++....+ +.|+.||+...+
T Consensus 361 ~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 361 RV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 43 3332 344567788888888766544333 789999986554
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=1.3e-10 Score=113.72 Aligned_cols=240 Identities=16% Similarity=0.088 Sum_probs=150.4
Q ss_pred eccCCceeEEEecccCCCccEEE-----EEeCCCCeeEeeCCCCceeee-ccCccCCeEEEEECCCCcEEEEeeCCCe--
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLV-----SASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDANALFSASGSADFT-- 84 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~la-----sgs~d~~v~iw~~~~~~~~~~-l~gH~~~V~~v~~~~~~~~l~s~s~Dg~-- 84 (350)
.+|+..+..+.||| ||++|| .|+.+.+|++||+++++.+.. +.+. ....++|+ |++.|+-++.|..
T Consensus 125 ~~~~~~l~~~~~Sp---Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 125 PDGTTALDQLSFSR---DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TTSCCEEEEEEECT---TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCCcEEEEEEEECC---CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCccc
Confidence 35666777887775 999888 344446799999999987643 2221 12456899 9998887777744
Q ss_pred -----------EEEeeCCCCCe--eeeee----ccccEeEEEEcCCCCeEEEee----CCCeEEEEECCCCCCCCeeecC
Q 018784 85 -----------AKLWDALTGDE--KHSFE----HKHIVRACAFSEDTHLLLTGG----FEKILRIFDLNRPDAPPREVGN 143 (350)
Q Consensus 85 -----------v~vWd~~~~~~--~~~~~----h~~~V~~~~~~~~~~~l~sg~----~d~~v~vwd~~~~~~~~~~~~~ 143 (350)
|++|++.+... ...+. |...+..+.++|++++|+... .+..|.++|+.++......+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 99999877653 22332 233577899999999875432 2358999999876544444444
Q ss_pred CCCcEEEEEEeCCCCcEEEEEeCC---CeEEEEECCCCce--eEee-cCCCCeEEEEEecCCcEEEEE--cCC--cEEEE
Q 018784 144 SSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKI--VQTL-ETKSPVTSAEVSRDGRYITTA--DGS--SVKFW 213 (350)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~s~~~d---g~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~--~~~--~i~vw 213 (350)
+....... +.+.++.+++....+ +.|..+|+.++.. ...+ .+...+. .|+++++.|+.. .++ .|++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 44444444 455667776666554 5799999987654 2333 3333333 788888776543 343 68999
Q ss_pred ECCCcceeeeeecCCCCce--eEecCCCCcEEEEecC---CCeEEEEEcccCee
Q 018784 214 DANHFGLVKGYNMPCNTES--ASLEPKLGNIFIAGGE---DMWVHVFDFHTGEQ 262 (350)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~sg~~---d~~i~v~d~~~~~~ 262 (350)
|+... ..+.+..+..... ....+....++++.+. -+.|+.||+.+++.
T Consensus 356 d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 98743 3344444332222 2233333344444332 37899999887754
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=8.6e-10 Score=96.34 Aligned_cols=221 Identities=10% Similarity=0.021 Sum_probs=142.3
Q ss_pred eEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec
Q 018784 64 VWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 64 V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 142 (350)
-.+..|+++ +.++++...++.|..||..++.. ..+.....+.+++++++++++++ . ++.|.+||..++........
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEec
Confidence 346678774 66777888889999999987654 34556678999999999996554 3 56899999875432111111
Q ss_pred ---CCCCcEEEEEEeCCCCcEEEEEeC---------CCeEEEEECC-CCceeEeecCCCCeEEEEEecCCcEEEEE--cC
Q 018784 143 ---NSSGSIRTVAWLHSDQTILSSCTD---------SGGVRLWDAR-SGKIVQTLETKSPVTSAEVSRDGRYITTA--DG 207 (350)
Q Consensus 143 ---~~~~~v~~~~~~~~~~~~~~s~~~---------dg~i~iwd~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~ 207 (350)
.....+..+++.++ ++++++... ...-.+|.+. .++...........+.++|+|+++.+..+ ..
T Consensus 92 ~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 12244677887764 445554322 1223444443 24433333333456789999999866443 35
Q ss_pred CcEEEEEC--CCccee--eee-ecC---CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEc
Q 018784 208 SSVKFWDA--NHFGLV--KGY-NMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFS 279 (350)
Q Consensus 208 ~~i~vwd~--~~~~~~--~~~-~~~---~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s 279 (350)
+.|..||. .++... +.+ ... ..+..+.+.+ +++++++...++.|.+||..+|+.+..+..+...+++++|.
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 78999986 333321 111 111 1233444544 47888888888899999999999888888777789999998
Q ss_pred -CCCCEE-EEec
Q 018784 280 -PGGESY-ASGS 289 (350)
Q Consensus 280 -p~~~~l-asgs 289 (350)
|+++.| ++..
T Consensus 250 g~d~~~L~vt~~ 261 (297)
T 3g4e_A 250 GKNYSEMYVTCA 261 (297)
T ss_dssp SGGGCEEEEEEB
T ss_pred CCCCCEEEEEcC
Confidence 887654 4443
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.7e-11 Score=110.37 Aligned_cols=170 Identities=12% Similarity=0.029 Sum_probs=125.6
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc---------eee-eccCccCCeEEEEECCCCcEEEEeeCCCeEEE
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---------WIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~---------~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~v 87 (350)
+++.+++++ ...++++|+.| .+++|+.++.+ ... ....+.+ |+.++| ++.+|+.+ .++.|++
T Consensus 39 ~~nlLais~---~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN---SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET---TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcC---CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 678887776 77889999987 45668854332 111 1223666 999999 88888888 8999999
Q ss_pred eeCCCCCeeee-eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 88 WDALTGDEKHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 88 Wd~~~~~~~~~-~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
||+.+...... ..|...+.++.+.+. .++++..||.+.+||+...... . +...|.+++|++.+ ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--~---~~~~Vs~v~WSpkG---~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--Q---LAQNVTSFDVTNSQ---LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--E---EEESEEEEEECSSE---EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--c---ccCCceEEEEcCCc---eEEEEc
Confidence 99876654333 346667888776654 3888999999999999854431 1 34579999999766 455778
Q ss_pred CCeEEEEECCCCce--eEee------c----CCCCeEEEEEecCCcEEEEE
Q 018784 167 SGGVRLWDARSGKI--VQTL------E----TKSPVTSAEVSRDGRYITTA 205 (350)
Q Consensus 167 dg~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~~~~~~~l~~~ 205 (350)
||++++|+...++. ..++ . +...+.++.|.++++++++.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 89999999887775 5555 2 35679999999999998763
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=1.8e-10 Score=102.86 Aligned_cols=263 Identities=13% Similarity=0.074 Sum_probs=161.1
Q ss_pred CceeEEEecccCCCccEEEEEe--CCCCeeEeeCCCCcee------eeccCccCCeEEEEECCCCcEEEEeeC-----CC
Q 018784 17 RPVVDLFYSPITPDGFFLVSAS--KDSSPMLRNGETGDWI------GTFEGHKGAVWSCCLDANALFSASGSA-----DF 83 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs--~d~~v~iw~~~~~~~~------~~l~gH~~~V~~v~~~~~~~~l~s~s~-----Dg 83 (350)
..+..|+++| +|+++++.. .++.++||.+.+++.. ....+|...+..++++++++++++-.. ++
T Consensus 17 ~~p~~va~~~---~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP---DGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT---TSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECC---CCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 5778888886 999988864 2343667766555443 112346678999999999987776433 68
Q ss_pred eEEEeeCCCCCeeeeeec-------cccEeEEEEcCCCCeE-EEee---CCCeEEEEECCCCCCCCeeecCCCCcEE-EE
Q 018784 84 TAKLWDALTGDEKHSFEH-------KHIVRACAFSEDTHLL-LTGG---FEKILRIFDLNRPDAPPREVGNSSGSIR-TV 151 (350)
Q Consensus 84 ~v~vWd~~~~~~~~~~~h-------~~~V~~~~~~~~~~~l-~sg~---~d~~v~vwd~~~~~~~~~~~~~~~~~v~-~~ 151 (350)
.|.+||+.+++....+.. ...+..+++.+++..+ ++.. .++.|.+||+.++.. ......|..... ..
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEEecCCCccccccc
Confidence 899999988875555432 2346889999865444 5544 678999999875432 121211111000 01
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc--CCcEEEEECCC---cc-----e-
Q 018784 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANH---FG-----L- 220 (350)
Q Consensus 152 ~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~---~~-----~- 220 (350)
.+.. ++..+.+...+++++.|. ..++.++++|+++.|..++ +..+..++... .. .
T Consensus 173 ~~~~-~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 173 DLVI-DGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp CCEE-TTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred ceeE-CCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 1111 333444555667766553 2357899999998665543 33455554321 00 0
Q ss_pred --eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC-CCcCEEEEEEcCCCCEEEEecCCCcEEEe
Q 018784 221 --VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (350)
Q Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw 297 (350)
+........+..+.+.+ +++++++...++.|.+||..+++....... +...+.+++|.+++.++++.+..+.+-+|
T Consensus 239 ~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp TTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred cceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 01111112334455555 489999999999999999856654333222 24568999999999988887766655444
Q ss_pred c
Q 018784 298 Q 298 (350)
Q Consensus 298 ~ 298 (350)
.
T Consensus 318 ~ 318 (343)
T 2qe8_A 318 N 318 (343)
T ss_dssp B
T ss_pred c
Confidence 3
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=3.1e-09 Score=92.76 Aligned_cols=221 Identities=11% Similarity=0.054 Sum_probs=145.9
Q ss_pred eEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee
Q 018784 20 VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (350)
Q Consensus 20 ~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~ 99 (350)
-+..|+| .++.++++...++.|..|+..+++.. .+. +...+.++++++++.++++. +..|.+||..+++.....
T Consensus 16 Egp~w~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 16 ESPVWEE--VSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEET--TTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred cCCeEEC--CCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEE
Confidence 3555665 24678888888999999999887653 232 34678999999999977654 678999998877644332
Q ss_pred ec-----cccEeEEEEcCCCCeEEEeeCC---------CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe
Q 018784 100 EH-----KHIVRACAFSEDTHLLLTGGFE---------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (350)
Q Consensus 100 ~h-----~~~V~~~~~~~~~~~l~sg~~d---------~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 165 (350)
.. ...++.+++.|+|++.++...+ ..-.+|.+..... .............++|++++..++++.+
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCCEEEEecC
Confidence 21 2357899999999977654321 3345665543221 1222222344678889877777778877
Q ss_pred CCCeEEEEEC--CCCce-----eEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCC-CCceeEe
Q 018784 166 DSGGVRLWDA--RSGKI-----VQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-NTESASL 235 (350)
Q Consensus 166 ~dg~i~iwd~--~~~~~-----~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~-~~~~~~~ 235 (350)
.++.|..||+ .++.. +..+. .......++++++|++.++. .++.|..||..+++.+..+..+. ....+.|
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 7889999987 45543 12222 12456788999999877765 45679999998888887777764 3445556
Q ss_pred c-CCCCcEEEEec
Q 018784 236 E-PKLGNIFIAGG 247 (350)
Q Consensus 236 ~-~~~~~~l~sg~ 247 (350)
. +....++++..
T Consensus 249 ~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 249 GGKNYSEMYVTCA 261 (297)
T ss_dssp ESGGGCEEEEEEB
T ss_pred eCCCCCEEEEEcC
Confidence 5 33234445444
No 216
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=1.3e-09 Score=98.47 Aligned_cols=263 Identities=10% Similarity=-0.008 Sum_probs=163.7
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCc---------cCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeec
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH---------KGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH 101 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH---------~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h 101 (350)
+..|..++.++.+..+|.++|+.+..+... ...+.+... .++..++.++.|+.|..+|..+++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 446677888899999999999887665432 122322222 2344556677899999999999998877654
Q ss_pred cccEeE-EEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCc----EEEEEEeCCCCcEEEEEeCCCeEEEEECC
Q 018784 102 KHIVRA-CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS----IRTVAWLHSDQTILSSCTDSGGVRLWDAR 176 (350)
Q Consensus 102 ~~~V~~-~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~s~~~dg~i~iwd~~ 176 (350)
...+.+ ... .+..++.++.++.+..+|..+++............ ....... ++ .++.+..++.|..+|.+
T Consensus 132 ~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~-~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FG-AAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TT-EEEECCTTTEEEEEETT
T ss_pred CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CC-EEEEEcCCCEEEEEECC
Confidence 332221 111 24467788889999999987765433222111000 0111111 33 35556778999999999
Q ss_pred CCceeEeecCCCC-----------eEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEE
Q 018784 177 SGKIVQTLETKSP-----------VTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA 245 (350)
Q Consensus 177 ~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (350)
+|+.+.......+ +.......++.+++++.++.+..+|..+++.+........ ..... .+..+..
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~---~~~~l~~ 282 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSV-NDFIV---DGNRIYL 282 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCE-EEEEE---ETTEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCC-CCceE---ECCEEEE
Confidence 9998877654321 1111112256666666788999999998887765543221 11111 2456677
Q ss_pred ecCCCeEEEEEcccCeeEEeecC-CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcc
Q 018784 246 GGEDMWVHVFDFHTGEQIGCNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHE 305 (350)
Q Consensus 246 g~~d~~i~v~d~~~~~~~~~~~~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 305 (350)
++.++.|..+|..+|+.+-.... ....+..... .+..|+.++.+|.|.++|..+.+..
T Consensus 283 ~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 283 VDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp EETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 77889999999999987655442 1222222222 2457888899999999998766544
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=2.9e-10 Score=110.67 Aligned_cols=254 Identities=11% Similarity=0.053 Sum_probs=164.3
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCc-c----CCeEEEEECCCCcEEEEee-----CCCeEEEeeCCCCCeeeeee
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH-K----GAVWSCCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH-~----~~V~~v~~~~~~~~l~s~s-----~Dg~v~vWd~~~~~~~~~~~ 100 (350)
+..|..++.|+.+..+|..+|+.+..+..+ . ..+.+.-.-.++.+++..+ .++.|+.+|..+++.+..+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 456778899999999999999998877654 1 1121100112455544433 37999999999999887664
Q ss_pred cccc---------------------------------EeEEEEcCCCCeEEEeeCCC-------------------eEEE
Q 018784 101 HKHI---------------------------------VRACAFSEDTHLLLTGGFEK-------------------ILRI 128 (350)
Q Consensus 101 h~~~---------------------------------V~~~~~~~~~~~l~sg~~d~-------------------~v~v 128 (350)
.... ...+++.|++.+++.+..++ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 2110 12567888888888877664 5888
Q ss_pred EECCCCCCCCeeec-CCC-------CcEEEEEEeCCCC---cEEEEEeCCCeEEEEECCCCceeEeecCCC---------
Q 018784 129 FDLNRPDAPPREVG-NSS-------GSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSGKIVQTLETKS--------- 188 (350)
Q Consensus 129 wd~~~~~~~~~~~~-~~~-------~~v~~~~~~~~~~---~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~--------- 188 (350)
+|..+++....... .+. ....-+.... ++ ..++.++.+|.++++|.++|+.+.......
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 89887665433222 121 1111122111 33 577888899999999999999877654211
Q ss_pred ---Ce------------------------EEEEEecCCcEEEEE-c----------------------------------
Q 018784 189 ---PV------------------------TSAEVSRDGRYITTA-D---------------------------------- 206 (350)
Q Consensus 189 ---~v------------------------~~~~~~~~~~~l~~~-~---------------------------------- 206 (350)
++ ..++++|++.++... .
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 01 145778877665442 1
Q ss_pred ---------CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC-CCcCEEEE
Q 018784 207 ---------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG-HHGPVHCV 276 (350)
Q Consensus 207 ---------~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~-h~~~v~~l 276 (350)
.+.|..||+.+++.+..+..........+.. .+.+++.++.|+.+++||..+|+.+..+.. +.....-+
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ 525 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPS 525 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCE
Confidence 1679999999998877766543333333332 356777889999999999999999887753 33333446
Q ss_pred EEcCCCCEEE
Q 018784 277 RFSPGGESYA 286 (350)
Q Consensus 277 ~~sp~~~~la 286 (350)
.|.++|+.++
T Consensus 526 ~y~~~G~~~v 535 (677)
T 1kb0_A 526 TYMVDGRQYV 535 (677)
T ss_dssp EEEETTEEEE
T ss_pred EEEeCCEEEE
Confidence 6777886543
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=2.2e-09 Score=95.06 Aligned_cols=219 Identities=12% Similarity=0.021 Sum_probs=138.2
Q ss_pred EEEEECCC-CcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec-
Q 018784 65 WSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG- 142 (350)
Q Consensus 65 ~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~- 142 (350)
...+|+++ +.++++...++.|..||..+++. ..+.....+.++++.|+++++++. . ..|.+||..++........
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCC
Confidence 45678886 56777777889999999877643 334456679999999999877754 3 4589999865442111111
Q ss_pred --CCCCcEEEEEEeCCCCcEEEEEeC------CCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEE--cCCcEEE
Q 018784 143 --NSSGSIRTVAWLHSDQTILSSCTD------SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA--DGSSVKF 212 (350)
Q Consensus 143 --~~~~~v~~~~~~~~~~~~~~s~~~------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~v 212 (350)
.....+..+++.+.+ .++++... .+.|..+| +++...........+.++|+|+++.+..+ .++.|.+
T Consensus 129 ~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp TTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 112357788887654 45554432 24566666 45543322223456789999999765433 3578999
Q ss_pred EECC--Cc-cee--eee-ecC---CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEc-CCC
Q 018784 213 WDAN--HF-GLV--KGY-NMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFS-PGG 282 (350)
Q Consensus 213 wd~~--~~-~~~--~~~-~~~---~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s-p~~ 282 (350)
||.. ++ ... +.+ ... .....+.+.+ +++++++...++.|.+||. +++.+..+..+...+++++|+ |++
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 9975 33 211 111 111 1122333333 5677777767789999998 677777776677779999998 887
Q ss_pred CEE-EEecCC
Q 018784 283 ESY-ASGSED 291 (350)
Q Consensus 283 ~~l-asgs~D 291 (350)
..| ++...+
T Consensus 284 ~~L~vt~~~~ 293 (326)
T 2ghs_A 284 SRLLVTSARE 293 (326)
T ss_dssp CEEEEEEBCT
T ss_pred CEEEEEecCC
Confidence 665 444444
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.31 E-value=4.2e-09 Score=95.02 Aligned_cols=254 Identities=13% Similarity=0.055 Sum_probs=159.9
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEe----
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVR---- 106 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~---- 106 (350)
+..|..++.++.+..+|.++|+.+..+...........+. + ..++.++.++.|..+|..+++.+........+.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-D-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-T-TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 3456778889999999999999876655432211111121 3 355667789999999999999887765433321
Q ss_pred --EEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCC-Cc--------E-EEEEEeCCCCcEEEEEeCCCeEEEEE
Q 018784 107 --ACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-GS--------I-RTVAWLHSDQTILSSCTDSGGVRLWD 174 (350)
Q Consensus 107 --~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~-~~--------v-~~~~~~~~~~~~~~s~~~dg~i~iwd 174 (350)
.... .+..++.+..++.+..+|..+++.......... +. + ..... .++ .+..++.++.+..+|
T Consensus 181 ~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~-~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 181 ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNG-VVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETT-EEEEECTTSCEEEEE
T ss_pred CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECC-EEEEEecCcEEEEEE
Confidence 1111 245677888899999999876654332221110 00 0 00011 133 344556789999999
Q ss_pred CCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeec-CCCCc-eeEecCCCCcEEEEecCCCeE
Q 018784 175 ARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM-PCNTE-SASLEPKLGNIFIAGGEDMWV 252 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~sg~~d~~i 252 (350)
.++++.+....... ...+.. .++.++++..++.+..+|..+++....... ..... .... .+..++.++.++.|
T Consensus 256 ~~tG~~~w~~~~~~-~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l 330 (376)
T 3q7m_A 256 LRSGQIMWKRELGS-VNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYL 330 (376)
T ss_dssp TTTCCEEEEECCCC-EEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEE
T ss_pred CCCCcEEeeccCCC-CCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeE
Confidence 99999887765433 333333 356666777788999999998887665542 11111 1111 24678888889999
Q ss_pred EEEEcccCeeEEeecCCCcCEEE-EEEcCCCCEEEEecCCCcEEEec
Q 018784 253 HVFDFHTGEQIGCNKGHHGPVHC-VRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 253 ~v~d~~~~~~~~~~~~h~~~v~~-l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
+++|..+|+.+.........+.+ ... .+..|+.++.+|.|+.|+
T Consensus 331 ~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 331 HWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 99999999987665543333322 122 244677789999999886
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=1.9e-09 Score=94.50 Aligned_cols=232 Identities=11% Similarity=0.025 Sum_probs=146.1
Q ss_pred eeccCccCCeEEEEECCCCc-EEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC
Q 018784 55 GTFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR 133 (350)
Q Consensus 55 ~~l~gH~~~V~~v~~~~~~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 133 (350)
..+..+........|++++. ++++...++.|..|+. ++.......+...+..+++.++|+++++...++.|.+|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 34444445567888999987 7788888899999997 45433333456678999999999977766667889999875
Q ss_pred CCCCCeeec----CCCCcEEEEEEeCCCCcEEEE----EeC-------------CCeEEEEECCCCceeEeecCCCCeEE
Q 018784 134 PDAPPREVG----NSSGSIRTVAWLHSDQTILSS----CTD-------------SGGVRLWDARSGKIVQTLETKSPVTS 192 (350)
Q Consensus 134 ~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~v~~ 192 (350)
+.. ..... .....+..+++.+ ++.++++ |.. .+.|..+|..+++..... .....+.
T Consensus 116 g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~g 192 (305)
T 3dr2_A 116 GQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNG 192 (305)
T ss_dssp SCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEE
T ss_pred CCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcc
Confidence 321 11111 1112345677665 5566665 321 256888888777654433 3345678
Q ss_pred EEEecCCcEEEEE-cC------CcEEEEECCCccee--eeee-c-CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe
Q 018784 193 AEVSRDGRYITTA-DG------SSVKFWDANHFGLV--KGYN-M-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 193 ~~~~~~~~~l~~~-~~------~~i~vwd~~~~~~~--~~~~-~-~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~ 261 (350)
++|+|+++.|..+ .. +.|.+||+...... +.+. . ......+.+.+ +++++++. .+ .|.+|+. +++
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~-~~-gv~~~~~-~g~ 268 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSS-GT-GVCVFDS-DGQ 268 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECC-SS-EEEEECT-TSC
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEec-CC-cEEEECC-CCC
Confidence 9999999865443 33 57999997654311 1111 1 11222344443 46655544 44 4999998 566
Q ss_pred eEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEE
Q 018784 262 QIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296 (350)
Q Consensus 262 ~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~v 296 (350)
.+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 269 ~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 269 LLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 666665544 5889999999888777776654443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=2.4e-09 Score=93.89 Aligned_cols=223 Identities=12% Similarity=0.079 Sum_probs=143.9
Q ss_pred CCceeEEEecccCCCcc-EEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC
Q 018784 16 SRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~-~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~ 94 (350)
........|+| +|+ ++.++..++.+..|+. +++ ...+..+...+..++++++++++++...++.|.+|+.. +.
T Consensus 44 ~~~~egp~~~~---~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 44 ATWSEGPAWWE---AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CSSEEEEEEEG---GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCccCCeEeC---CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 33445666775 887 7788888899999987 455 34555566778999999999988877677899999975 54
Q ss_pred eeeeeec-----cccEeEEEEcCCCCeEEE----eeC-------------CCeEEEEECCCCCCCCeeecCCCCcEEEEE
Q 018784 95 EKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (350)
Q Consensus 95 ~~~~~~h-----~~~V~~~~~~~~~~~l~s----g~~-------------d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 152 (350)
......+ ...+..+++.|+|.+.+| |.. .+.|..||..++... ... .......++
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--~~~-~~~~p~gl~ 194 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--RMA-DLDHPNGLA 194 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE--EEE-EESSEEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE--EEe-cCCCCcceE
Confidence 3322211 134678999999998886 332 245666666443322 222 334567788
Q ss_pred EeCCCCcEEEEEeC-----CCeEEEEECCCCcee--Eeec--CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeee
Q 018784 153 WLHSDQTILSSCTD-----SGGVRLWDARSGKIV--QTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKG 223 (350)
Q Consensus 153 ~~~~~~~~~~s~~~-----dg~i~iwd~~~~~~~--~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~ 223 (350)
|++++..++++... .+.|..||+..+... ..+. .......+.++++|++.++. .+.|.+|+.. ++.+..
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~-g~~~~~ 272 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSD-GQLLGH 272 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECTT-SCEEEE
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECCC-CCEEEE
Confidence 88766556555444 268999998754311 1111 12334568899999977665 4459999984 556666
Q ss_pred eecCCCCceeEecCCCCcEEEEecCCC
Q 018784 224 YNMPCNTESASLEPKLGNIFIAGGEDM 250 (350)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~sg~~d~ 250 (350)
+..+.....+.+.+ +++.|..++.++
T Consensus 273 ~~~~~~~~~~~f~~-d~~~L~it~~~~ 298 (305)
T 3dr2_A 273 IPTPGTASNCTFDQ-AQQRLFITGGPC 298 (305)
T ss_dssp EECSSCCCEEEECT-TSCEEEEEETTE
T ss_pred EECCCceeEEEEeC-CCCEEEEEcCCe
Confidence 66665555666664 455555555443
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=1.5e-09 Score=105.83 Aligned_cols=253 Identities=15% Similarity=0.126 Sum_probs=162.8
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCc--cCCeEEEEECC---CCcEEEEee-----CCCeEEEeeCCCCCeeeeee
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH--KGAVWSCCLDA---NALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH--~~~V~~v~~~~---~~~~l~s~s-----~Dg~v~vWd~~~~~~~~~~~ 100 (350)
+..|+.++.|+.+..+|.++|+.+..+... ......+..+| ++.+++..+ .||.|..||..+++.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 456788899999999999999988766532 11111111111 555555433 37999999999999887664
Q ss_pred cc--------------------------------ccEeEEEEcCCCCeEEEeeCCCe-------------------EEEE
Q 018784 101 HK--------------------------------HIVRACAFSEDTHLLLTGGFEKI-------------------LRIF 129 (350)
Q Consensus 101 h~--------------------------------~~V~~~~~~~~~~~l~sg~~d~~-------------------v~vw 129 (350)
.. .....+++.|+..+++.+..++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 00125788888888988887764 9999
Q ss_pred ECCCCCCCCeeecC-CC-------CcEEEEEEeCCCC---cEEEEEeCCCeEEEEECCCCceeEeecCCC----------
Q 018784 130 DLNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSGKIVQTLETKS---------- 188 (350)
Q Consensus 130 d~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~---~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~---------- 188 (350)
|+.+++........ +. ..+...... .++ ..++.++.+|.++++|.++|+.+.......
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELP-IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeec-cCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99887654433221 21 111111111 123 267788899999999999999874332110
Q ss_pred ------------------------------CeEEEEEecCCcEEEEE-c-------------------------------
Q 018784 189 ------------------------------PVTSAEVSRDGRYITTA-D------------------------------- 206 (350)
Q Consensus 189 ------------------------------~v~~~~~~~~~~~l~~~-~------------------------------- 206 (350)
....++++|+..++... .
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 01125778776655432 0
Q ss_pred --------------CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCc-
Q 018784 207 --------------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHG- 271 (350)
Q Consensus 207 --------------~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~- 271 (350)
++.|..||+.+++.+..+..+.......+.. .+.+++.|+.|+.|+.||.++|+.+-.+....+
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~ 518 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGV 518 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCc
Confidence 2569999999998887766544332223322 367888899999999999999999877654322
Q ss_pred CEEEEEEcCCCCEE
Q 018784 272 PVHCVRFSPGGESY 285 (350)
Q Consensus 272 ~v~~l~~sp~~~~l 285 (350)
...-+.|..+|+.+
T Consensus 519 ~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 519 MAAPVTYSVDGEQY 532 (689)
T ss_dssp CSCCEEEEETTEEE
T ss_pred ccCceEEEECCEEE
Confidence 22446677788654
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=3.8e-12 Score=115.03 Aligned_cols=255 Identities=10% Similarity=-0.004 Sum_probs=138.2
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeecc--ccEeE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVRA 107 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~--~~V~~ 107 (350)
++.+|++++.|+.+..||..+|+.+..++. +.+.+..+..++.++++++.||.|..||..+++.+..+... ..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 566889999999999999999999988876 55555555567778888899999999999988876655322 11111
Q ss_pred EEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC
Q 018784 108 CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK 187 (350)
Q Consensus 108 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~ 187 (350)
.-....+..+++++.|+.+..||..+++......... ...+.+ .+..++.++.|+.|+.||.++|+.+..+...
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccc-cCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 0011134567888999999999998776544332211 122233 4445666777899999999999876665421
Q ss_pred CCeEEEEEecC----CcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEE----EEecCCCeEEEEEccc
Q 018784 188 SPVTSAEVSRD----GRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIF----IAGGEDMWVHVFDFHT 259 (350)
Q Consensus 188 ~~v~~~~~~~~----~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~sg~~d~~i~v~d~~~ 259 (350)
. .....+.++ +.+++++.++.+..||.++++.+..+..............++.++ ..+ ++.++.+|..+
T Consensus 160 ~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~t 236 (369)
T 2hz6_A 160 D-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA--VETLRYLTFMS 236 (369)
T ss_dssp E-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHH
T ss_pred c-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec--ccceeeeehhc
Confidence 1 111223332 567777788999999999988877665433222111111122211 111 23355666666
Q ss_pred Ce----eEEeecCCCcCEEEEEEcC--CCCEEEEecCCCcEEEecCC
Q 018784 260 GE----QIGCNKGHHGPVHCVRFSP--GGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 260 ~~----~~~~~~~h~~~v~~l~~sp--~~~~lasgs~Dg~v~vw~~~ 300 (350)
|+ .+-.... ...+. +| .+..++.++.||.|+..+..
T Consensus 237 G~~~~~~~W~~~~-~~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 237 GEVGRITKWKYPF-PKETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHTSCCCC-CCHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred CCcccceeeeecc-Ccccc----ccccccceEEEecccCCEEecCcc
Confidence 65 3211110 01110 22 23456777888888888764
No 224
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=2.3e-09 Score=93.86 Aligned_cols=196 Identities=10% Similarity=0.095 Sum_probs=132.6
Q ss_pred cCCceeEEEecccCCC-ccEEEEEeCCCCeeEeeCCCCceeee-ccC----ccCCeEEEEECCCCcEEEEeeCC------
Q 018784 15 HSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGT-FEG----HKGAVWSCCLDANALFSASGSAD------ 82 (350)
Q Consensus 15 H~~~v~~~~~~~~s~d-g~~lasgs~d~~v~iw~~~~~~~~~~-l~g----H~~~V~~v~~~~~~~~l~s~s~D------ 82 (350)
+...+.++++++ + |+++++... ..+.+|+.+ ++.... ... +...+..+++++++.+.++...+
T Consensus 69 ~~~~~~~i~~~~---~~g~l~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 69 YGGIPAGCQCDR---DANQLFVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EECCEEEEEECS---SSSEEEEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCCCceEEEec---CCCcEEEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 556788888875 7 776665543 478889988 776543 221 22457899999999988887665
Q ss_pred ---------CeEEEeeCCCCCeeeeeeccccEeEEEEc----CCCCeEEEe-eCCCeEEEEECC-CCCCC----CeeecC
Q 018784 83 ---------FTAKLWDALTGDEKHSFEHKHIVRACAFS----EDTHLLLTG-GFEKILRIFDLN-RPDAP----PREVGN 143 (350)
Q Consensus 83 ---------g~v~vWd~~~~~~~~~~~h~~~V~~~~~~----~~~~~l~sg-~~d~~v~vwd~~-~~~~~----~~~~~~ 143 (350)
+.|..|+.. ++......+......++++ |+++.|+.+ ..++.|.+||+. .+... ......
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 567777765 5444444444557889999 999765544 568899999975 22110 011112
Q ss_pred CC-CcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-CCeEEEEEecCCcEE-EEEc-CCcEEEEECCC
Q 018784 144 SS-GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYI-TTAD-GSSVKFWDANH 217 (350)
Q Consensus 144 ~~-~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~-~~~i~vwd~~~ 217 (350)
+. ..+..+++.+ ++.++++...++.|.+||.++++.+..+..+ ..+..++++++++.| ++.. ++.|..|++..
T Consensus 223 ~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 223 THEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 22 4567787765 5567777767789999999877766665544 668899999999844 4443 46898998764
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.23 E-value=1.5e-09 Score=99.03 Aligned_cols=239 Identities=12% Similarity=0.040 Sum_probs=150.8
Q ss_pred EEEecccCCCccEEEEEe----------CCCCeeEeeCCCCceeeeccCc-------cCCeEEEEECCCCcEEEEeeC--
Q 018784 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs----------~d~~v~iw~~~~~~~~~~l~gH-------~~~V~~v~~~~~~~~l~s~s~-- 81 (350)
.+.++| ||++|..+. .++.|.++|..+++.+.++.-- ...-..+.+++|+++++.+..
T Consensus 122 gia~Sp---Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAE---DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECC---CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 677776 998777765 4678999999999988776411 112345689999998887764
Q ss_pred CCeEEEeeCCCCCeeeeeeccccEeEEEEcCCC-CeEEEeeCCCeEEEEECCCCCCCCe---eecCCCCc-EEEEEEeCC
Q 018784 82 DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPR---EVGNSSGS-IRTVAWLHS 156 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~~---~~~~~~~~-v~~~~~~~~ 156 (350)
+++|.+.|+.+++.+..+.-... ....|++ ..+++.+.|+.+.+.++........ ........ ...+.+.+.
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT
T ss_pred CCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC
Confidence 58999999999887776654332 2223322 3344455566666556532211100 00000001 112344555
Q ss_pred CCcEEEEEeCCCeEEEEECCCCcee--EeecC-----------CCCeEEEEEecCCcEEEEEc-----------CCcEEE
Q 018784 157 DQTILSSCTDSGGVRLWDARSGKIV--QTLET-----------KSPVTSAEVSRDGRYITTAD-----------GSSVKF 212 (350)
Q Consensus 157 ~~~~~~s~~~dg~i~iwd~~~~~~~--~~~~~-----------~~~v~~~~~~~~~~~l~~~~-----------~~~i~v 212 (350)
++.++++. ..++|.+.|+...... ..+.. ......+.++++++.+.... .+.|.+
T Consensus 276 g~~~~~~s-~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV 354 (426)
T 3c75_H 276 SGRLVWPT-YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV 354 (426)
T ss_dssp TCEEEEEB-TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCEEEEEe-CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence 55555554 5689999998765421 11110 11222368899977554432 246999
Q ss_pred EECCCcceeeeeecCCCCceeEecCCCCcEEEEec-CCCeEEEEEcccCeeEEee
Q 018784 213 WDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFDFHTGEQIGCN 266 (350)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d~~i~v~d~~~~~~~~~~ 266 (350)
+|+.+.+.+..+........+.+.++...++++.. .++.|.++|+.+++.+.++
T Consensus 355 ID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 355 LNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999999998887766777788875431555444 6999999999999998876
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.21 E-value=4e-08 Score=86.93 Aligned_cols=205 Identities=10% Similarity=-0.024 Sum_probs=133.3
Q ss_pred eEEEecccCCC-ccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee
Q 018784 20 VDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (350)
Q Consensus 20 ~~~~~~~~s~d-g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~ 98 (350)
-+..|+| + +.++++...++.|..|+..+++.. .+. +...+.++++++++.++++. +..|.+||..+++....
T Consensus 52 egp~~~~---~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 52 EGPTFDP---ASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEET---TTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEE
T ss_pred cCCeEeC---CCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEE
Confidence 3556665 5 567788888899999998877653 232 34678999999999988765 34599999887765433
Q ss_pred eec-----cccEeEEEEcCCCCeEEEeeC------CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC
Q 018784 99 FEH-----KHIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (350)
Q Consensus 99 ~~h-----~~~V~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d 167 (350)
... ...++.++++|+|++.++... .+.|..++ ++. .............++|++++..++++...+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 221 235889999999987765432 23444445 222 111112223466788887666677777777
Q ss_pred CeEEEEECC--CC-c-----eeEeec-CCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCC-CceeEec
Q 018784 168 GGVRLWDAR--SG-K-----IVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLE 236 (350)
Q Consensus 168 g~i~iwd~~--~~-~-----~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~ 236 (350)
+.|.+||+. ++ + .+..+. .......++++++|.++++. .++.|..||. +.+.+..+..+.. ...+.+.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999986 55 3 122222 12346778899999877665 4578999998 4556666665543 3344444
No 227
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=5.3e-09 Score=95.66 Aligned_cols=193 Identities=9% Similarity=-0.005 Sum_probs=130.4
Q ss_pred cEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCC--eEEEEECCCCcee
Q 018784 104 IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIV 181 (350)
Q Consensus 104 ~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg--~i~iwd~~~~~~~ 181 (350)
.+..++|+++++++++...++.|++||+....... .... ..... ++|.+.++.++++ ..++ .|.++|...+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-~~~~-~~~~~-ia~~~~g~~l~~~-d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-VHPG-FKGGK-PAVTKDKQRVYSI-GWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-EEET-CCBCB-CEECTTSSEEEEE-BSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-eecc-CCCCc-eeEecCCCcEEEE-ecCCCceEEEEEcCCCcee
Confidence 57899999999988887788999999987543321 1222 22233 7777655544444 4444 8999998766543
Q ss_pred Eee----c-CCCCeEEEEEec-CCcEEEEEcCCcEEEEECCCcceeee----eecCC--CCc-eeEecCCCCcEEEEecC
Q 018784 182 QTL----E-TKSPVTSAEVSR-DGRYITTADGSSVKFWDANHFGLVKG----YNMPC--NTE-SASLEPKLGNIFIAGGE 248 (350)
Q Consensus 182 ~~~----~-~~~~v~~~~~~~-~~~~l~~~~~~~i~vwd~~~~~~~~~----~~~~~--~~~-~~~~~~~~~~~l~sg~~ 248 (350)
..+ . .......++++| ++.++++..++.|+.||..+...... ..... .+. .+.+.+..+.++++...
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 343 2 334567889999 67777755567899999876543221 11111 112 66777766888999888
Q ss_pred CCeEEEEEcccCeeEEeecCC---------------CcCEEEEEEcCCCCEEEEec-CCCcEEEecCCCC
Q 018784 249 DMWVHVFDFHTGEQIGCNKGH---------------HGPVHCVRFSPGGESYASGS-EDGTIRIWQTNPP 302 (350)
Q Consensus 249 d~~i~v~d~~~~~~~~~~~~h---------------~~~v~~l~~sp~~~~lasgs-~Dg~v~vw~~~~~ 302 (350)
.+.|+.|+.... +..+.++ -.....++++|+|.++++-+ .+++|+.|+....
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 999999987643 2222222 23578999999999889988 8999999996443
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=3.3e-11 Score=108.87 Aligned_cols=204 Identities=13% Similarity=0.045 Sum_probs=110.0
Q ss_pred CCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEE-E
Q 018784 72 NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIR-T 150 (350)
Q Consensus 72 ~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~-~ 150 (350)
++..+++++.||.|..||..+++.+..+.. ..+.+..+..++..+++++.|+.|..||..+++............+. +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 567788899999999999999999888766 55666556677878888899999999999766543222111000000 0
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcE-EEEEcCCcEEEEECCCcceeeeeecCCC
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRY-ITTADGSSVKFWDANHFGLVKGYNMPCN 229 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~i~vwd~~~~~~~~~~~~~~~ 229 (350)
... ..++ .+++++.|+.|+.||.++|+.+..+..... ..++|++.. ++++.++.|+.||.++++.+..+.....
T Consensus 87 p~~-~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~ 161 (369)
T 2hz6_A 87 PCR-SSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY 161 (369)
T ss_dssp SCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE
T ss_pred ceE-ecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc
Confidence 000 0233 455667789999999999998877765432 234455544 4555678999999998876655433211
Q ss_pred CceeEecCC--CCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEE-EEEEcCCCC
Q 018784 230 TESASLEPK--LGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVH-CVRFSPGGE 283 (350)
Q Consensus 230 ~~~~~~~~~--~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~-~l~~sp~~~ 283 (350)
....+... ....+++++.|+.|+.||..+|+.+-... ...++. ...+++++.
T Consensus 162 -~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 162 -AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp -CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred -cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 11111110 11456778889999999999998765554 333443 344555664
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=3.4e-09 Score=103.33 Aligned_cols=270 Identities=13% Similarity=0.077 Sum_probs=164.8
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCccCC----------e-EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGA----------V-WSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~----------V-~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~ 99 (350)
+..|..++.++.+.-+|..+|+.+..++.+... + ..+.+ .+..++.++.|+.|..+|..+++.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 345666778899999999999998877543221 1 11122 3456677789999999999999988776
Q ss_pred ecc---ccEeEEEEcC---CCCeEEEee------CCCeEEEEECCCCCCCCeeec-CC----------------------
Q 018784 100 EHK---HIVRACAFSE---DTHLLLTGG------FEKILRIFDLNRPDAPPREVG-NS---------------------- 144 (350)
Q Consensus 100 ~h~---~~V~~~~~~~---~~~~l~sg~------~d~~v~vwd~~~~~~~~~~~~-~~---------------------- 144 (350)
... .....+..+| ++. ++.++ .++.|..||..+++....... ..
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 432 1111111222 444 44443 368999999987764433211 00
Q ss_pred -------CCcEEEEEEeCCCCcEEEEEeCCC-------------------eEEEEECCCCceeEeecCC----------C
Q 018784 145 -------SGSIRTVAWLHSDQTILSSCTDSG-------------------GVRLWDARSGKIVQTLETK----------S 188 (350)
Q Consensus 145 -------~~~v~~~~~~~~~~~~~~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~----------~ 188 (350)
......+++.+..+ +++.+..++ .|..||.++|+.+..++.. .
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 00111355555444 455555555 3999999999998877642 1
Q ss_pred CeEEEEEecCCc---EEE-EEcCCcEEEEECCCcceeeeeecCCC-----------------------------------
Q 018784 189 PVTSAEVSRDGR---YIT-TADGSSVKFWDANHFGLVKGYNMPCN----------------------------------- 229 (350)
Q Consensus 189 ~v~~~~~~~~~~---~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~----------------------------------- 229 (350)
+........+|+ .++ ...++.++++|.++++.+........
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222223333564 444 44578999999999887643322110
Q ss_pred -----CceeEecCCCCcEEEEec---------------------------------------------CCCeEEEEEccc
Q 018784 230 -----TESASLEPKLGNIFIAGG---------------------------------------------EDMWVHVFDFHT 259 (350)
Q Consensus 230 -----~~~~~~~~~~~~~l~sg~---------------------------------------------~d~~i~v~d~~~ 259 (350)
.....+.+.. .++.+.. .++.|+.||+.+
T Consensus 386 ~Gg~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDT-GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TCSSCSSCCEEETTT-TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred ccccCCCcceECCCC-CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 0012334432 3333321 147899999999
Q ss_pred CeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCccc
Q 018784 260 GEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 260 ~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~ 306 (350)
|+.+-....+. ++..-.+...+.+++.|+.|+.|+.||..+.+.+-
T Consensus 465 G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 465 QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccce
Confidence 99876554333 23333556677889999999999999998887763
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=4.1e-09 Score=102.62 Aligned_cols=269 Identities=14% Similarity=0.099 Sum_probs=165.6
Q ss_pred cEEEEEeCCCCeeEeeCCCCceeeeccCccCC----------e-EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee
Q 018784 32 FFLVSASKDSSPMLRNGETGDWIGTFEGHKGA----------V-WSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 32 ~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~----------V-~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~ 100 (350)
..|..++.++.+.-+|..+|+.+..++..... + ..+++ .+..++.++.|+.|..+|..+++.+..+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 35566677889999999999988776543210 1 12223 34566777889999999999999888765
Q ss_pred cc------ccEeEEEEcCCCCeEEEeeC------CCeEEEEECCCCCCCCeeecCC------------------------
Q 018784 101 HK------HIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNS------------------------ 144 (350)
Q Consensus 101 h~------~~V~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~~~------------------------ 144 (350)
.. ..+.+.-.- .+..++.++. ++.|..||..+++.........
T Consensus 156 ~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 32 112111011 2344555543 6899999998766443221110
Q ss_pred -------CCcEEEEEEeCCCCcEEEEEeCCC-------------------eEEEEECCCCceeEeecCC----------C
Q 018784 145 -------SGSIRTVAWLHSDQTILSSCTDSG-------------------GVRLWDARSGKIVQTLETK----------S 188 (350)
Q Consensus 145 -------~~~v~~~~~~~~~~~~~~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~----------~ 188 (350)
......+++.+..+.++ .+..++ .|..+|.++|+.+..++.. .
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy-~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMY-VGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeEeCCCcccccceeEcCCCCEEE-EECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 00112345555555444 444433 5999999999998876631 1
Q ss_pred CeEEEEEecCC---cEEEE-EcCCcEEEEECCCcceeeeeecCCCC----------------------------------
Q 018784 189 PVTSAEVSRDG---RYITT-ADGSSVKFWDANHFGLVKGYNMPCNT---------------------------------- 230 (350)
Q Consensus 189 ~v~~~~~~~~~---~~l~~-~~~~~i~vwd~~~~~~~~~~~~~~~~---------------------------------- 230 (350)
....+....+| ..++. ..++.+.++|..+++.+..+......
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~ 393 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH 393 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc
Confidence 12223333466 44444 45789999999998887655432110
Q ss_pred --ceeEecCCCCcEEEEecC-------------------------------------------CCeEEEEEcccCeeEEe
Q 018784 231 --ESASLEPKLGNIFIAGGE-------------------------------------------DMWVHVFDFHTGEQIGC 265 (350)
Q Consensus 231 --~~~~~~~~~~~~l~sg~~-------------------------------------------d~~i~v~d~~~~~~~~~ 265 (350)
....+.+. ..++.+... .+.|..||+.+++.+-.
T Consensus 394 ~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 394 NWHPMSFNPQ-TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp CSSCCEEETT-TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred CCCCceEcCC-CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 02234443 344444321 27899999999987655
Q ss_pred ecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCccc
Q 018784 266 NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 266 ~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~ 306 (350)
.. +..+++...+...+.+++.++.||.+++||..+.+.+-
T Consensus 473 ~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 43 23344555566777888889999999999998777653
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.14 E-value=4.7e-07 Score=77.46 Aligned_cols=246 Identities=6% Similarity=-0.059 Sum_probs=150.1
Q ss_pred EEEEEeCCCCeeEeeCCCCcee-----eeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCeeeeeec-cccE
Q 018784 33 FLVSASKDSSPMLRNGETGDWI-----GTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEH-KHIV 105 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~~~~-----~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h-~~~V 105 (350)
+|+.+.. +.|+.++....... ..+.........++++++ +.++++-...+.|.+++.........+.. -...
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 3444333 35666665543221 112212234678899885 55666666788999999876544333322 2467
Q ss_pred eEEEEcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC--CCeEEEEECCCCceeE
Q 018784 106 RACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGKIVQ 182 (350)
Q Consensus 106 ~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~--dg~i~iwd~~~~~~~~ 182 (350)
..+++.+++..|+ +-...+.|.++++.... ..............+++.+.++.++++... .+.|..+++.... ..
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 8999999765554 54567899999986432 112222222467888888767777776644 4688888875432 22
Q ss_pred eec--CCCCeEEEEEecCCcEEE-EE-cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 183 TLE--TKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 183 ~~~--~~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
.+. .-.....+++++++..|. +. ..+.|.++|...............+..+.. ..+.++++....+.|.++|..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCC
Confidence 221 223567899999765543 33 346899999875433222222122223333 346777777778899999999
Q ss_pred cCeeEEeecCCC-cCEEEEEEcCCCC
Q 018784 259 TGEQIGCNKGHH-GPVHCVRFSPGGE 283 (350)
Q Consensus 259 ~~~~~~~~~~h~-~~v~~l~~sp~~~ 283 (350)
+++.+..+.... ...+.+++.|++.
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEccccccccceeeecCccC
Confidence 998887775332 3467788888764
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.12 E-value=7.6e-09 Score=91.16 Aligned_cols=253 Identities=16% Similarity=0.070 Sum_probs=154.3
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee-ccccEeEE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRAC 108 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h~~~V~~~ 108 (350)
+|.+ ..++.+ +..+|. +++.+..+..+........+. ++. +..++.++.|..+|.. ++...... ....+.++
T Consensus 70 ~g~l-~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~~-l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 70 DGTI-YFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-EDI-LYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATP 142 (330)
T ss_dssp TTEE-CCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TTE-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred CCcE-EEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CCE-EEEEecCCEEEEEcCC-CCEEEEEcCCCceeeee
Confidence 5554 445554 777875 666655554333322223333 444 4556778999999988 76665554 33345666
Q ss_pred EEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-
Q 018784 109 AFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (350)
Q Consensus 109 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~- 187 (350)
...+++. ++.++.++.+..||.. +...... ......+.++... .++.+.++. +.|..+| .+++.+......
T Consensus 143 ~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~-~~~~~~~~~~~~d-~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 143 IVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF-KTNDAITSAASIG-KDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY 214 (330)
T ss_dssp EECTTSC-EEEECTTSEEEEECTT-SCEEEEE-ECSSCCCSCCEEC-TTCCEEEES---SSEEEEC-TTSCEEEEECCSS
T ss_pred EEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE-ecCCCceeeeEEc-CCCEEEEEe---CEEEEEC-CCCcEEEEEccCC
Confidence 6676776 5567778999999986 4322222 2222334444433 345555443 7899999 777766665543
Q ss_pred CCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec
Q 018784 188 SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK 267 (350)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~ 267 (350)
..+.++...+++.+.+++.++.+..+|. +...+..+.............. +..+..++.++.|..+|. +++.+....
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~-~g~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN-TDTIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECT-TSCEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcC-CCeEEEecCCCCEEEECC-CCcEEEEEE
Confidence 4567778888988888888788888875 4444444443322222112222 345667778888999996 677665555
Q ss_pred CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 268 ~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.....+.++...+++. |..|+.+|.+++.....
T Consensus 292 ~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 292 TGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred cCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 4555677777877776 45588999999986543
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=4.2e-08 Score=83.53 Aligned_cols=202 Identities=12% Similarity=0.121 Sum_probs=139.5
Q ss_pred eeeeeeccc--cEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 95 EKHSFEHKH--IVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 95 ~~~~~~h~~--~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
.+.++.|.. ....++|++++.+.++.+. ++.|+++|+.+++...............+++. ++.++++...++.+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEE
Confidence 344556654 3689999998755555443 68999999987664433322222223344443 55777777888999
Q ss_pred EEEECCCCceeEeecCC-CCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecCCC------CceeEecCCCCcE
Q 018784 171 RLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMPCN------TESASLEPKLGNI 242 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 242 (350)
.++|..+.+.+.++... .. ...+++|++.+..++ ++.|.++|..+++.++....... .....+. ++.+
T Consensus 89 ~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~l 164 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEV 164 (266)
T ss_dssp EEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred EEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEE
Confidence 99999999998888654 22 233666776554444 56899999999888877665322 1122233 4677
Q ss_pred EEEecCCCeEEEEEcccCeeEEeecCC-------------CcCEEEEEEcCCCC-EEEEecCCCcEEEecCCCC
Q 018784 243 FIAGGEDMWVHVFDFHTGEQIGCNKGH-------------HGPVHCVRFSPGGE-SYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 243 l~sg~~d~~i~v~d~~~~~~~~~~~~h-------------~~~v~~l~~sp~~~-~lasgs~Dg~v~vw~~~~~ 302 (350)
++....++.|.+.|..+++.+..+.-. ......++|+|+++ +++++.....|.+-++...
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 877778899999999999988776421 13568999999975 5778888899999988654
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=6.6e-09 Score=93.19 Aligned_cols=244 Identities=9% Similarity=-0.080 Sum_probs=155.9
Q ss_pred EEEecccCCCccEEEEEe----------CCCCeeEeeCCCCceeeeccCcc-------CCeEEEEECCCCcEEEEeeC--
Q 018784 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDANALFSASGSA-- 81 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs----------~d~~v~iw~~~~~~~~~~l~gH~-------~~V~~v~~~~~~~~l~s~s~-- 81 (350)
.+.|+| ||++|..+. .+++|.+||..+++.+.++.-+. ..-..++++||+++++.+..
T Consensus 69 ~i~~sp---Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGH---SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECT---TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 687876 998888776 37889999999999999875330 12346799999998887754
Q ss_pred CCeEEE--eeCCCCCeeeeeeccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCC-----CCCCC---eeecCCCCcEEE
Q 018784 82 DFTAKL--WDALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNR-----PDAPP---REVGNSSGSIRT 150 (350)
Q Consensus 82 Dg~v~v--Wd~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~-----~~~~~---~~~~~~~~~v~~ 150 (350)
+..|.+ +|..+ ...+.-.+. ..+.|+++ .+++.+.|+.+.+.|+.. +.... ....-...+.
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-- 217 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-- 217 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--
T ss_pred CCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--
Confidence 467889 99877 333332221 12234443 345566788888888765 11110 0011111222
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCCCc--eeEeecCC-----------CCeEEEEEecCCcEEEEE-c-C--------
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARSGK--IVQTLETK-----------SPVTSAEVSRDGRYITTA-D-G-------- 207 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~~~--~~~~~~~~-----------~~v~~~~~~~~~~~l~~~-~-~-------- 207 (350)
. .+.++.++.... +++.+.|+.+.. .+..+... .....+.++|+++.+..+ . .
T Consensus 218 -~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 218 -Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp -E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred -c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 2 455555555443 899999986542 22222211 111226799998766543 2 2
Q ss_pred CcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEec-CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcC
Q 018784 208 SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 208 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp 280 (350)
..+.++|+.+.+.+..+........+.+.++...++++.. .++.|.++|+.+++.+.++..... .+.+++.+
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 3567999999998888877666677777775445777777 699999999999999988764433 34555543
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=1.4e-08 Score=95.06 Aligned_cols=248 Identities=11% Similarity=0.096 Sum_probs=164.9
Q ss_pred eEEEecccCCCccEEEEEeCC-CCeeEeeCCCCceeeeccC-ccCCeEEEEE-C-CCCcEEEEee---------------
Q 018784 20 VDLFYSPITPDGFFLVSASKD-SSPMLRNGETGDWIGTFEG-HKGAVWSCCL-D-ANALFSASGS--------------- 80 (350)
Q Consensus 20 ~~~~~~~~s~dg~~lasgs~d-~~v~iw~~~~~~~~~~l~g-H~~~V~~v~~-~-~~~~~l~s~s--------------- 80 (350)
-.+.+-..++||++|.....+ ..|.+.|+.+.++...++= -......+++ + |++.+++.++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 345555566789887666554 4588899999998874431 1234678887 5 8888877763
Q ss_pred ---CCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCC---------------eEEEEECCCCCCCCeeec
Q 018784 81 ---ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK---------------ILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 81 ---~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~---------------~v~vwd~~~~~~~~~~~~ 142 (350)
.++.+-+.|..+.+....+.-.+....++++|+|+++++.+.+. .|.++|..+..
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------- 242 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------- 242 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH-------
T ss_pred ccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee-------
Confidence 34689999999888777766544567788999999999888653 23333321100
Q ss_pred CCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCC--Cce-eEeecCCCCeEEEEEecCCcEEEEEc--CCcEEEEECCC
Q 018784 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS--GKI-VQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANH 217 (350)
Q Consensus 143 ~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~ 217 (350)
.+.+.+....+ +.|.+.|.++ ++. +..+........+.++|||+++.+++ ..+|.++|..+
T Consensus 243 ---------~~v~~Gk~~~i-----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 243 ---------KAIAAGDYQEL-----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp ---------HHHHHTCSEEE-----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred ---------EeccCCCeeEE-----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcc
Confidence 00112222222 4599999998 555 56665555566789999999987775 46899999986
Q ss_pred cc------------eeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEccc----------CeeEEeecCCCcCE--
Q 018784 218 FG------------LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHT----------GEQIGCNKGHHGPV-- 273 (350)
Q Consensus 218 ~~------------~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~----------~~~~~~~~~h~~~v-- 273 (350)
.. .+........+.-..|.++ |..+++.-.|+.|.+||+.. ...+..+..|..+-
T Consensus 309 ~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d-G~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~ 387 (595)
T 1fwx_A 309 FDAVFYENADPRSAVVAEPELGLGPLHTAFDGR-GNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHL 387 (595)
T ss_dssp HHHHHHSCCCGGGGEEECCBCCSCEEEEEECTT-SEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEE
T ss_pred cccccccccCcccceEEEcCCCCCcceEEECCC-CeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccc
Confidence 53 2222333334455567765 57788888999999999987 44555665554332
Q ss_pred ---EEEEEcCCCCEEEEec
Q 018784 274 ---HCVRFSPGGESYASGS 289 (350)
Q Consensus 274 ---~~l~~sp~~~~lasgs 289 (350)
..+.++|||++|++..
T Consensus 388 ~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 388 KTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EETTTTSTTCCSSEEEEEE
T ss_pred eeccceEeCCCCCEEEEcC
Confidence 2235689999988754
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.98 E-value=2.4e-08 Score=87.98 Aligned_cols=250 Identities=14% Similarity=0.062 Sum_probs=151.8
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeecccc-EeEE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHI-VRAC 108 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~-V~~~ 108 (350)
+|. |..++.++.+..+| .+++.+..+..+...+.++....++.+.+. +.+ |..+|. +++....+..... ....
T Consensus 30 ~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~~--l~~~d~-~g~~~~~~~~~~~~~~~~ 103 (330)
T 3hxj_A 30 NGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG-SDK--VYAINP-DGTEKWRFDTKKAIVSDF 103 (330)
T ss_dssp TSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS-SCE--EEEECC-CGGGGGGSCC-----CCE
T ss_pred CCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe-cCc--EEEECC-CCcEEEEEECCCCcccCc
Confidence 454 56678889999999 889888777665566677778778876653 333 888886 5554433332221 2222
Q ss_pred EEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC-
Q 018784 109 AFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (350)
Q Consensus 109 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~- 187 (350)
.+. +..+..++.++.+..+|.. +...... ......+.++... .++.++ .++.++.|..+|.. ++.+......
T Consensus 104 ~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~-~~~~~~~~~~~~~-~~g~l~-vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 104 TIF--EDILYVTSMDGHLYAINTD-GTEKWRF-KTKKAIYATPIVS-EDGTIY-VGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp EEE--TTEEEEECTTSEEEEECTT-SCEEEEE-ECSSCCCSCCEEC-TTSCEE-EECTTSEEEEECTT-SCEEEEEECSS
T ss_pred eEE--CCEEEEEecCCEEEEEcCC-CCEEEEE-cCCCceeeeeEEc-CCCEEE-EEcCCCEEEEECCC-CCEeEEEecCC
Confidence 233 4567778888999999976 3322221 2222233333333 344444 45677899999998 8776665543
Q ss_pred CCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecCCCCc-eeEecCCCCcEEEEecCCCeEEEEEcccCeeEEee
Q 018784 188 SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCN 266 (350)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~ 266 (350)
..+.++.+.+++.+++++ +.+..+| .+......+....... ..... .++ .+..++.++.|..+|. +++.+...
T Consensus 177 ~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~~g-~l~v~t~~~gl~~~~~-~g~~~~~~ 250 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-EDG-TIYVTSLDGHLYAINP-DGTEKWRF 250 (330)
T ss_dssp CCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-TTS-CEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEEC-CCC-eEEEEcCCCeEEEECC-CCCEeEEe
Confidence 345566777888877766 7899999 5555554444332222 22222 233 4555666788888874 55555444
Q ss_pred cCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 267 ~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
......+.++.+.+++. |..++.+|.|..+|.
T Consensus 251 ~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred eCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 43333344555655664 666788888888885
No 237
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=1.9e-07 Score=89.05 Aligned_cols=252 Identities=14% Similarity=0.065 Sum_probs=150.8
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeecc--CccC--CeEE-EEECCCCcEEEEeeC-----CCeEEEeeCCCCCeeeeee
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFE--GHKG--AVWS-CCLDANALFSASGSA-----DFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~--gH~~--~V~~-v~~~~~~~~l~s~s~-----Dg~v~vWd~~~~~~~~~~~ 100 (350)
+..|..++.|+.+..+|..+|+.+..+. +|.. .+.+ ..+ .++.+++..+. ++.|..+|..+++.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4467778889999999999998876543 2211 1111 011 14555554442 8999999999999887664
Q ss_pred ccccE---------------------------------------eEEEEcCCCCeEEEeeCC----------------Ce
Q 018784 101 HKHIV---------------------------------------RACAFSEDTHLLLTGGFE----------------KI 125 (350)
Q Consensus 101 h~~~V---------------------------------------~~~~~~~~~~~l~sg~~d----------------~~ 125 (350)
..... ..+++.+....++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32111 124566665666655432 35
Q ss_pred EEEEECCCCCCCCeeec-CCC--------CcEEEEEEeCCCC---cEEEEEeCCCeEEEEECCCCceeEeecCCC-----
Q 018784 126 LRIFDLNRPDAPPREVG-NSS--------GSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSGKIVQTLETKS----- 188 (350)
Q Consensus 126 v~vwd~~~~~~~~~~~~-~~~--------~~v~~~~~~~~~~---~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~----- 188 (350)
|..+|..+++....... .+. ..+. +... .++ .+++.+..+|.+.++|.++|+.+.......
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQP-VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEE-ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eecc-cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 88889887665433221 111 1111 1111 133 456678888999999999999877654321
Q ss_pred ---------Ce--------------------------EEEEEecCCcEEEEE----------------------------
Q 018784 189 ---------PV--------------------------TSAEVSRDGRYITTA---------------------------- 205 (350)
Q Consensus 189 ---------~v--------------------------~~~~~~~~~~~l~~~---------------------------- 205 (350)
++ ..++++|+..++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 11 234667765544322
Q ss_pred ----------cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCc-CEE
Q 018784 206 ----------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHG-PVH 274 (350)
Q Consensus 206 ----------~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~-~v~ 274 (350)
..+.|..||+.+++.+..+..........+.. .+.++..++.|+.|+.||..+|+.+-.+..... ...
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 510 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS 510 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEee
Confidence 23678999999888777665443222222221 245667789999999999999998876653221 112
Q ss_pred EEEEcCCCCEEE
Q 018784 275 CVRFSPGGESYA 286 (350)
Q Consensus 275 ~l~~sp~~~~la 286 (350)
-+.+..+++.++
T Consensus 511 p~~~~~~G~~yv 522 (571)
T 2ad6_A 511 PMTYSFKGKQYI 522 (571)
T ss_dssp CEEEEETTEEEE
T ss_pred eEEEEECCEEEE
Confidence 234556776543
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=3.5e-07 Score=77.86 Aligned_cols=193 Identities=11% Similarity=0.042 Sum_probs=132.9
Q ss_pred CceeEEEecccCCCccEEEEEeC--CCCeeEeeCCCCceeeecc--CccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 17 RPVVDLFYSPITPDGFFLVSASK--DSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~--d~~v~iw~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
.....+.|++ |+.+.++.+. +++|++.|..+++.+.++. .+ .....+++.. +.+.++.-.++.+.++|..+
T Consensus 21 ~f~~Gl~~~~---dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAE---NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLN-EKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECS---TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEET-TEEEEEETTCSEEEEEETTT
T ss_pred CCcccEEEeC---CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeC-CEEEEEEecCCEEEEEECCC
Confidence 3467899885 7766666553 5789999999999988764 22 2223455543 45667777899999999999
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecC-C---CCcEEEEEEeCCCCcEEEEEeCCC
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN-S---SGSIRTVAWLHSDQTILSSCTDSG 168 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~-~---~~~v~~~~~~~~~~~~~~s~~~dg 168 (350)
.+.+..+... .-....++++++.++++..++.|.++|..+.+........ . -..+..+.|. ++.+++....++
T Consensus 96 ~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~ 172 (266)
T 2iwa_A 96 LSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTD 172 (266)
T ss_dssp TEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSS
T ss_pred CcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCC
Confidence 8887777544 1123446678887877777899999998765433222111 1 1235677776 456777777788
Q ss_pred eEEEEECCCCceeEeecCC--------------CCeEEEEEecCCcEE-EEEc-CCcEEEEECCC
Q 018784 169 GVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYI-TTAD-GSSVKFWDANH 217 (350)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l-~~~~-~~~i~vwd~~~ 217 (350)
.|.+.|+.+++.+..+... ...+.++++|+++.+ +++. ...+.+.++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9999999999998888642 245889999998654 4443 45677766543
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.5e-07 Score=91.49 Aligned_cols=271 Identities=14% Similarity=0.083 Sum_probs=159.1
Q ss_pred cEEEEEeCCCCeeEeeCCCCceeeeccCccCC----------e-EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee
Q 018784 32 FFLVSASKDSSPMLRNGETGDWIGTFEGHKGA----------V-WSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 32 ~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~----------V-~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~ 100 (350)
..|..++.++.+.-+|..+|+.+..++..... + ..+++ .+..++.++.|+.|..+|..+++.+..+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 35566777889999999999988776543211 0 11222 23456667889999999999999887764
Q ss_pred cccc--EeEEEEcC--CCCeEEEeeC------CCeEEEEECCCCCCCCeeecC--C------------------------
Q 018784 101 HKHI--VRACAFSE--DTHLLLTGGF------EKILRIFDLNRPDAPPREVGN--S------------------------ 144 (350)
Q Consensus 101 h~~~--V~~~~~~~--~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~~--~------------------------ 144 (350)
.... ...+..+| .+..++.+.. ++.|..+|..+++........ .
T Consensus 145 ~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~ 224 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWK 224 (668)
T ss_dssp CSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHH
T ss_pred cCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceee
Confidence 3110 00111111 1334555433 588999998876644322110 0
Q ss_pred ----CCcEEEEEEeCCCCcEEEEEeCCC-------------------eEEEEECCCCceeEeecCC----------CCeE
Q 018784 145 ----SGSIRTVAWLHSDQTILSSCTDSG-------------------GVRLWDARSGKIVQTLETK----------SPVT 191 (350)
Q Consensus 145 ----~~~v~~~~~~~~~~~~~~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~----------~~v~ 191 (350)
......+++.+..+ +++.+..++ .|..+|.++|+.+...+.. .+..
T Consensus 225 ~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 225 LGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 00111245554444 444455444 4999999999998877642 2333
Q ss_pred EEEEecCCc----EEEEEcCCcEEEEECCCcceeeeeecCCCC-------------------------------------
Q 018784 192 SAEVSRDGR----YITTADGSSVKFWDANHFGLVKGYNMPCNT------------------------------------- 230 (350)
Q Consensus 192 ~~~~~~~~~----~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~------------------------------------- 230 (350)
...+..+|+ +++...++.+.++|..+++.+.........
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 333444665 334456789999999988876333221100
Q ss_pred ceeEecCCCCcEEE-----------------------------------EecCCCeEEEEEcccCeeEEeecCCCcCEEE
Q 018784 231 ESASLEPKLGNIFI-----------------------------------AGGEDMWVHVFDFHTGEQIGCNKGHHGPVHC 275 (350)
Q Consensus 231 ~~~~~~~~~~~~l~-----------------------------------sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~ 275 (350)
....+.+..+.+++ ....++.|..||+.+|+.+-....+ .+...
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcC
Confidence 01223333222222 1123488999999999876444322 22333
Q ss_pred EEEcCCCCEEEEecCCCcEEEecCCCCCccc
Q 018784 276 VRFSPGGESYASGSEDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 276 l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~ 306 (350)
..+...+.+++.|+.|+.|+.||....+...
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence 3344467788889999999999988776653
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.91 E-value=7.5e-07 Score=86.54 Aligned_cols=255 Identities=15% Similarity=0.131 Sum_probs=155.6
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCcc----CCeEE-EEECCCCcEEEEee-----CCCeEEEeeCCCCCeeeeee
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHK----GAVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~----~~V~~-v~~~~~~~~l~s~s-----~Dg~v~vWd~~~~~~~~~~~ 100 (350)
+..|+.++.|+.+..+|.++|+.+..+.... ..+.+ ..+ .++.+++..+ .+|.|..+|..+++.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4467778899999999999999887665321 11110 011 1455554433 26999999999999887764
Q ss_pred cc----c----------------------------cEeEEEEcCCCCeEEEeeCCC-------------------eEEEE
Q 018784 101 HK----H----------------------------IVRACAFSEDTHLLLTGGFEK-------------------ILRIF 129 (350)
Q Consensus 101 h~----~----------------------------~V~~~~~~~~~~~l~sg~~d~-------------------~v~vw 129 (350)
.. . ....+++.|...+++.+..++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 012467888888888887765 38888
Q ss_pred ECCCCCCCCeeecC-CC-------CcEEEEEEeCCCC--cEEEEEeCCCeEEEEECCCCceeEeecCCC-----------
Q 018784 130 DLNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS----------- 188 (350)
Q Consensus 130 d~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~----------- 188 (350)
|+.+++........ +. ...........+. ..++.++.+|.+.++|.++|+.+.......
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 98877654433221 21 1222111111222 257788899999999999999874332110
Q ss_pred --C------------------------eEEEEEecCCcEEEEE-------------------------------------
Q 018784 189 --P------------------------VTSAEVSRDGRYITTA------------------------------------- 205 (350)
Q Consensus 189 --~------------------------v~~~~~~~~~~~l~~~------------------------------------- 205 (350)
+ ...++++|+..++...
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 0 0125667765443320
Q ss_pred cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCE-EEEEEcCCCC-
Q 018784 206 DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPV-HCVRFSPGGE- 283 (350)
Q Consensus 206 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v-~~l~~sp~~~- 283 (350)
.++.|..||+.+++.+..+..........+.. .+.++++|+.|+.++.||..+|+.+..+....... .-+.+..+|+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 12679999999998877665543322222222 36788888999999999999999987765432211 2233445665
Q ss_pred EEEE
Q 018784 284 SYAS 287 (350)
Q Consensus 284 ~las 287 (350)
+++.
T Consensus 515 yva~ 518 (668)
T 1kv9_A 515 YVAI 518 (668)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=6.6e-07 Score=75.38 Aligned_cols=189 Identities=14% Similarity=0.158 Sum_probs=125.3
Q ss_pred eeeeeccc--cEeEEEEcCCCCeEEEeeCCC--eEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEE
Q 018784 96 KHSFEHKH--IVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (350)
Q Consensus 96 ~~~~~h~~--~V~~~~~~~~~~~l~sg~~d~--~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~ 171 (350)
+.++.|.. ....+.|+ ++.+..+.+.++ .|+++|+.+++...........-...++. .++++......++.+.
T Consensus 34 v~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEE
T ss_pred EEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEE
Confidence 34556654 45889998 666667777765 89999998776543332222111223443 3556777777789999
Q ss_pred EEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecCCCCce----eEecCCCCcEEEEe
Q 018784 172 LWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMPCNTES----ASLEPKLGNIFIAG 246 (350)
Q Consensus 172 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~sg 246 (350)
++|..+.+.+.++.....- ..++++++.|..++ .+.|.++|..+++.+........... ..+...++++++..
T Consensus 111 v~D~~t~~~~~ti~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp EEETTTCCEEEEEECSSCC--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEECccCcEEEEEECCCCc--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 9999999999988864422 23445666555554 56799999999988877665321111 01122257888888
Q ss_pred cCCCeEEEEEcccCeeEEeecCC------------CcCEEEEEEcCCCCEEEEec
Q 018784 247 GEDMWVHVFDFHTGEQIGCNKGH------------HGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 247 ~~d~~i~v~d~~~~~~~~~~~~h------------~~~v~~l~~sp~~~~lasgs 289 (350)
..++.|.+.|..+|+.+..+... ....+.|+|+|+++.|...+
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 88999999999999987765421 12458999999876554433
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.90 E-value=1.1e-07 Score=84.78 Aligned_cols=188 Identities=9% Similarity=-0.017 Sum_probs=123.8
Q ss_pred ccCCceeEEEecccCCCccEEEEEeC-----CCCeeEeeCCCCceeeeccC------ccCCeEEEEECCC-CcEEEEee-
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASK-----DSSPMLRNGETGDWIGTFEG------HKGAVWSCCLDAN-ALFSASGS- 80 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~-----d~~v~iw~~~~~~~~~~l~g------H~~~V~~v~~~~~-~~~l~s~s- 80 (350)
+|...+..++|++ +|++.++-+. +..|.+||..+++.+..+.- +......++++++ +...++-.
T Consensus 64 ~~~~~p~gv~~d~---~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 64 ITFDTVLGIKSDG---NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CCCSCEEEEEECS---SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred cceeEeeEEEEcC---CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCc
Confidence 5667889999886 8887776544 57899999999987766542 2234678899875 55666665
Q ss_pred --CCCeEEEeeCCCCCeeeeeec------------------------------cccEeEEEEcCCCCeEEEeeCCC-eEE
Q 018784 81 --ADFTAKLWDALTGDEKHSFEH------------------------------KHIVRACAFSEDTHLLLTGGFEK-ILR 127 (350)
Q Consensus 81 --~Dg~v~vWd~~~~~~~~~~~h------------------------------~~~V~~~~~~~~~~~l~sg~~d~-~v~ 127 (350)
.++.|.+||..+++....+.. ...+..++|+|+++.|+.+..++ .+.
T Consensus 141 ~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 141 PDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp SGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred cCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence 689999999887765443311 02367899999999888877665 444
Q ss_pred EEECC---CCCCC-------CeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC--CCCeEEEEE
Q 018784 128 IFDLN---RPDAP-------PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET--KSPVTSAEV 195 (350)
Q Consensus 128 vwd~~---~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~ 195 (350)
.++.. .+... .... .+.+....+++.+ ++.++++...++.|.+||..+++....... -.....+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred EEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 44421 11100 0111 1122344566654 567888888889999999856654333322 234788999
Q ss_pred ecCCcEEEEEc
Q 018784 196 SRDGRYITTAD 206 (350)
Q Consensus 196 ~~~~~~l~~~~ 206 (350)
.++++++++..
T Consensus 299 ~~~g~l~v~~~ 309 (343)
T 2qe8_A 299 GSDGYLYFDCN 309 (343)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCcEEEEeC
Confidence 99888776654
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.89 E-value=9.3e-06 Score=69.27 Aligned_cols=204 Identities=9% Similarity=-0.048 Sum_probs=130.5
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCee
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEK 96 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~~ 96 (350)
.+.++++++ .++.+.++-..++.|..++.........+.........++++++ +.+.++-...+.|.+++.......
T Consensus 37 ~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 37 VIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 456787875 13456666667788999998765544333332345678999986 556666667789999998644332
Q ss_pred eeeecc-ccEeEEEEcCCCCeEEEeeC---CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 97 HSFEHK-HIVRACAFSEDTHLLLTGGF---EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 97 ~~~~h~-~~V~~~~~~~~~~~l~sg~~---d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
...... .....++++|++..|+.+.. .+.|..++++... ..............+++.+.++.++++....+.|..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 222222 45789999997665554443 4688888876322 111211223467888888777788888888889999
Q ss_pred EECCCCceeEeecCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeee
Q 018784 173 WDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~ 225 (350)
+|+........+........+++. .+.++++. .++.|..+|..+++.+..+.
T Consensus 194 ~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 194 LNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 999765443333333334566655 34444444 35789999998877766654
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.87 E-value=1.9e-05 Score=78.33 Aligned_cols=272 Identities=10% Similarity=0.088 Sum_probs=165.0
Q ss_pred eeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeec-cCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeee
Q 018784 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (350)
Q Consensus 19 v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l-~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~ 97 (350)
|.++...+ +|.+.+ |+.++-+..|+..++++.... ..+...|.++....++.+.+....+ .+.+||..+++...
T Consensus 175 i~~i~~d~---~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~-Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQ---GDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGA-GLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEE---TTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSS-CEEEEETTTTEEEE
T ss_pred eEEEEECC---CCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCC-CeEEEeCCCCeEEE
Confidence 66676654 666555 566556888888777664432 2235678888888888877754334 47888977654332
Q ss_pred eee--------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCee------ecCCCCcEEEEEEeCCCCcEEEE
Q 018784 98 SFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE------VGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 98 ~~~--------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
... ....|.++...++|.+.+ |..+ .|.+||..+....... ..-....|.++...+ ++.+. .
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~lW-i 325 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGMW-L 325 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCEE-E
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCEE-E
Confidence 211 135699999888887554 4444 5888887543211000 011235688886554 34443 3
Q ss_pred EeCCCeEEEEECCCCceeEeec-------CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeee--------cCC
Q 018784 164 CTDSGGVRLWDARSGKIVQTLE-------TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN--------MPC 228 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~--------~~~ 228 (350)
|+.++.|..++..++....... ....|.++...++|.+.++..++.|..||..+.....-.. ...
T Consensus 326 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~ 405 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGS 405 (795)
T ss_dssp EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSC
T ss_pred EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCC
Confidence 5566789999876554322111 1346889999999999888888789999987654322111 111
Q ss_pred CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec----CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 229 NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK----GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 229 ~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~----~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
...........+++|..|+.++-|.+||..+++...... .....|.++...+++.+.+... + -|.+|+...
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~ 480 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQ 480 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTT
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCC
Confidence 222222222345536677777779999988776443221 2345799999988888665443 4 477777543
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=1.5e-06 Score=78.77 Aligned_cols=232 Identities=13% Similarity=0.070 Sum_probs=138.7
Q ss_pred CCccEE-EEEeCCCCeeEeeCCCC----ceeeecc--------CccCCeEEEEECCCCcEEEEeeCC------CeEEEee
Q 018784 29 PDGFFL-VSASKDSSPMLRNGETG----DWIGTFE--------GHKGAVWSCCLDANALFSASGSAD------FTAKLWD 89 (350)
Q Consensus 29 ~dg~~l-asgs~d~~v~iw~~~~~----~~~~~l~--------gH~~~V~~v~~~~~~~~l~s~s~D------g~v~vWd 89 (350)
.++++| ++|-.++.|.+.|..+. +..++++ |-+ .=..+...|++ +++++..+ |.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 466555 66667888999998754 5566663 211 22456778999 66676555 8999999
Q ss_pred CCCCCeeeeeecc----ccEeEEEEcCCCCeEEEee-------------------CCCeEEEEECCCCCCCCeeecC-CC
Q 018784 90 ALTGDEKHSFEHK----HIVRACAFSEDTHLLLTGG-------------------FEKILRIFDLNRPDAPPREVGN-SS 145 (350)
Q Consensus 90 ~~~~~~~~~~~h~----~~V~~~~~~~~~~~l~sg~-------------------~d~~v~vwd~~~~~~~~~~~~~-~~ 145 (350)
..+.+.+..+... ..-+.+.|+|+++.+++.. .+.+|.+||+.+.+........ ..
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9999988887522 2234578899999998885 3789999999864322222111 12
Q ss_pred CcEEEEEE--eCCCCcEEEEEe-----CCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCc
Q 018784 146 GSIRTVAW--LHSDQTILSSCT-----DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (350)
Q Consensus 146 ~~v~~~~~--~~~~~~~~~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~ 218 (350)
.....+.| .+.+...++++. .+++|.+|....++.. .+.+.|+.+.
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~---------------------------~~~vIdi~~~ 303 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWN---------------------------AEKVIEIPAE 303 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEE---------------------------EEEEEEECCE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCcee---------------------------EEEEEeCCCc
Confidence 23455555 555555666666 6778888765432210 1112222211
Q ss_pred ceeeeee--------cCCCCceeEecCCCCcEEEEecCCCeEEEEEccc---CeeEEeecCC--------------CcCE
Q 018784 219 GLVKGYN--------MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHT---GEQIGCNKGH--------------HGPV 273 (350)
Q Consensus 219 ~~~~~~~--------~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~---~~~~~~~~~h--------------~~~v 273 (350)
.....+. .......+.++++...++++....+.|.+||+.. .+.+..+... .+..
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP 383 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP 383 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC
T ss_pred cccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC
Confidence 1110000 0122344555665445666666678999999853 2444333211 0135
Q ss_pred EEEEEcCCCCEEEEec
Q 018784 274 HCVRFSPGGESYASGS 289 (350)
Q Consensus 274 ~~l~~sp~~~~lasgs 289 (350)
..+.++|||++|+.+.
T Consensus 384 r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 384 QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSSEEEEEC
T ss_pred CEEEEcCCCCEEEEEc
Confidence 7899999999887766
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.85 E-value=4.2e-05 Score=75.85 Aligned_cols=272 Identities=11% Similarity=0.107 Sum_probs=165.7
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccC-------ccCCeEEEEECCCCcEEEEeeCCCeEEEe
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-------HKGAVWSCCLDANALFSASGSADFTAKLW 88 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~g-------H~~~V~~v~~~~~~~~l~s~s~Dg~v~vW 88 (350)
...|.++...+ +|.+.+ |+.++-+.+|+..+++....... ....|+++....++.+.+... + .|.+|
T Consensus 214 ~~~i~~i~~d~---~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~-Gl~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQS---PTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF-N-DLNIY 287 (795)
T ss_dssp CCCEEEEEEEE---TTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES-S-CEEEE
T ss_pred CCeeEEEEEcC---CCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC-C-hhheE
Confidence 34577776654 666555 45444588899877665432221 235699999998988876543 3 68889
Q ss_pred eCCCCCeeeeee--------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCee-----ecCCCCcEEEEEEeC
Q 018784 89 DALTGDEKHSFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE-----VGNSSGSIRTVAWLH 155 (350)
Q Consensus 89 d~~~~~~~~~~~--------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-----~~~~~~~v~~~~~~~ 155 (350)
|..++....... ....|.++...++|. |..|..++.|..|+.......... ..-....|.++...+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp ETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred cCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 977664333221 235699999888886 556777777888876432211000 011234688886544
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEeec---------CCCCeEEEEEecCCc-EEEEEcCCcEEEEECCCcceeeeee
Q 018784 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLE---------TKSPVTSAEVSRDGR-YITTADGSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 156 ~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~v~~~~~~~~~~-~l~~~~~~~i~vwd~~~~~~~~~~~ 225 (350)
++.+. .|+.++.|..||..+++...... ....|.++...++++ +.++..++.+..||..+.... .+.
T Consensus 367 -~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~ 443 (795)
T 4a2l_A 367 -DKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFN 443 (795)
T ss_dssp -TSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EEC
T ss_pred -CCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-Eee
Confidence 34444 35677789999988775433221 135688888889998 777777778999998765432 222
Q ss_pred c-----CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec------CCCcCEEEEEEcCCCCEEEEecCCCcE
Q 018784 226 M-----PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK------GHHGPVHCVRFSPGGESYASGSEDGTI 294 (350)
Q Consensus 226 ~-----~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~------~h~~~v~~l~~sp~~~~lasgs~Dg~v 294 (350)
. +............+.+.+.. . +-+.+||..+++...... -....|.++...+++.+.+... . -|
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl 519 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GL 519 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CE
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ce
Confidence 1 11222222222345555544 4 458889987765433221 1235799999999988766544 4 47
Q ss_pred EEecCCC
Q 018784 295 RIWQTNP 301 (350)
Q Consensus 295 ~vw~~~~ 301 (350)
..|+...
T Consensus 520 ~~~~~~~ 526 (795)
T 4a2l_A 520 SVFKQEG 526 (795)
T ss_dssp EEEEEET
T ss_pred EEEeCCC
Confidence 7777543
No 247
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.84 E-value=1e-06 Score=84.08 Aligned_cols=249 Identities=15% Similarity=0.072 Sum_probs=147.7
Q ss_pred EEEEeCCCCeeEeeCCCCceeeeccC--ccC--CeEE-EEECCCCcEEEEee-----CCCeEEEeeCCCCCeeeeeeccc
Q 018784 34 LVSASKDSSPMLRNGETGDWIGTFEG--HKG--AVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFEHKH 103 (350)
Q Consensus 34 lasgs~d~~v~iw~~~~~~~~~~l~g--H~~--~V~~-v~~~~~~~~l~s~s-----~Dg~v~vWd~~~~~~~~~~~h~~ 103 (350)
|..++.|+.+.-+|..+|+.+..... +.. .+.+ -.+ .++.+++.++ .+|.|+.+|..+++.+..+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 67788899999999999998765432 211 1111 011 1455555433 48999999999999887764321
Q ss_pred cE---------------------------------------eEEEEcCCCCeEEEeeCC----------------CeEEE
Q 018784 104 IV---------------------------------------RACAFSEDTHLLLTGGFE----------------KILRI 128 (350)
Q Consensus 104 ~V---------------------------------------~~~~~~~~~~~l~sg~~d----------------~~v~v 128 (350)
.. ...++.+...+++.+..+ ..|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 134555666777766654 37888
Q ss_pred EECCCCCCCCeeecC-CCC-------cEEEEEEeCCCC---cEEEEEeCCCeEEEEECCCCceeEeecCCC---------
Q 018784 129 FDLNRPDAPPREVGN-SSG-------SIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSGKIVQTLETKS--------- 188 (350)
Q Consensus 129 wd~~~~~~~~~~~~~-~~~-------~v~~~~~~~~~~---~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~--------- 188 (350)
+|..+++........ +.. ...-+.....++ .+++.++.+|.+.+.|.++|+.+.......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~ 362 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD 362 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccc
Confidence 898876654333222 211 111121111234 567778899999999999999876654211
Q ss_pred -----Ce--------------------------EEEEEecCCcEEEEE--------------------------------
Q 018784 189 -----PV--------------------------TSAEVSRDGRYITTA-------------------------------- 205 (350)
Q Consensus 189 -----~v--------------------------~~~~~~~~~~~l~~~-------------------------------- 205 (350)
++ ..++++|+..++...
T Consensus 363 ~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p 442 (599)
T 1w6s_A 363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGP 442 (599)
T ss_dssp TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred cCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCC
Confidence 11 134455554433221
Q ss_pred --------cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCc-CEEEE
Q 018784 206 --------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHG-PVHCV 276 (350)
Q Consensus 206 --------~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~-~v~~l 276 (350)
..+.+..||+.+++.+.............+.. .+.++..++.|+.++.||.++|+++-.++...+ ...-+
T Consensus 443 ~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~ 521 (599)
T 1w6s_A 443 KGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPM 521 (599)
T ss_dssp TSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred cCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEe-cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccE
Confidence 23578889998888776664432211111111 356677799999999999999998866543221 11224
Q ss_pred EEcCCCCE
Q 018784 277 RFSPGGES 284 (350)
Q Consensus 277 ~~sp~~~~ 284 (350)
.+..+|+.
T Consensus 522 ~y~~~G~q 529 (599)
T 1w6s_A 522 TYTHKGTQ 529 (599)
T ss_dssp EEEETTEE
T ss_pred EEEeCCEE
Confidence 55566654
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.83 E-value=2.3e-05 Score=68.30 Aligned_cols=233 Identities=10% Similarity=-0.034 Sum_probs=134.7
Q ss_pred CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCC-C-eEEE
Q 018784 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-K-ILRI 128 (350)
Q Consensus 51 ~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d-~-~v~v 128 (350)
.+.+..+..+ .....+++++++.++++-...+.|..||... .....+.....+..+++.++++++++.... + .|..
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 3444455432 3456789999999888877889999999764 333344445678899999999866655432 2 4666
Q ss_pred EECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce-eEee-------c---CCCCeEEEEEec
Q 018784 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-VQTL-------E---TKSPVTSAEVSR 197 (350)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~-~~~~-------~---~~~~v~~~~~~~ 197 (350)
+|..++................++.. .++.++++...++.|..+|..+++. +... . .-...+.+ ++
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred EcCCCCeEEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 66654432111111111222333332 3455566655678999999876531 1100 0 11223444 77
Q ss_pred CCcEEEEE--cCCcEEEEECCC-cce--eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEE--eecCCC
Q 018784 198 DGRYITTA--DGSSVKFWDANH-FGL--VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIG--CNKGHH 270 (350)
Q Consensus 198 ~~~~l~~~--~~~~i~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~--~~~~h~ 270 (350)
+++.|..+ ..+.|..||... ... ...+.....+..+.+.+ +++++++....+.|.++|.. |+... .+....
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 77655443 356899999864 211 11111112234455554 47888888888899999975 55432 233333
Q ss_pred cCEEEEEEc---CCCCEEEEecC
Q 018784 271 GPVHCVRFS---PGGESYASGSE 290 (350)
Q Consensus 271 ~~v~~l~~s---p~~~~lasgs~ 290 (350)
...++++|. |++..|+..+.
T Consensus 255 ~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 255 IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCceEEEEecccCCCCEEEEECC
Confidence 568999998 78766554443
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.81 E-value=4.1e-06 Score=69.91 Aligned_cols=189 Identities=10% Similarity=0.076 Sum_probs=124.4
Q ss_pred eeeeecc--ccEeEEEEcCCCCeEEEeeCC--CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEE
Q 018784 96 KHSFEHK--HIVRACAFSEDTHLLLTGGFE--KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (350)
Q Consensus 96 ~~~~~h~--~~V~~~~~~~~~~~l~sg~~d--~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~ 171 (350)
+..+.|. .....+.|++ +.+..+.+.+ ..|+.+|+.+++...........--..++.. ++++......++.+.
T Consensus 12 ~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEE
T ss_pred EEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEE
Confidence 4455665 3577999987 5556666664 4899999987655433322222112233333 566777777889999
Q ss_pred EEECCCCceeEeecCCCCeEEEEEecCCcEEEEE-cCCcEEEEECCCcceeeeeecCCCCce----eEecCCCCcEEEEe
Q 018784 172 LWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTES----ASLEPKLGNIFIAG 246 (350)
Q Consensus 172 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~sg 246 (350)
++|..+.+.+.++.....-..+ ++++..|..+ .++.|.++|..+++.++.+....+... ..+...++++++..
T Consensus 89 v~D~~tl~~~~ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp EEETTTTEEEEEEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEECCcCcEEEEEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEE
Confidence 9999999999988865433333 4555544444 356899999999988877765332111 11222357888887
Q ss_pred cCCCeEEEEEcccCeeEEeecCC-------------CcCEEEEEEcCCCCE-EEEec
Q 018784 247 GEDMWVHVFDFHTGEQIGCNKGH-------------HGPVHCVRFSPGGES-YASGS 289 (350)
Q Consensus 247 ~~d~~i~v~d~~~~~~~~~~~~h-------------~~~v~~l~~sp~~~~-lasgs 289 (350)
..+..|.+.|..+|+.+..+... ....+.|++.|+++. +++|-
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 78889999999999987765311 124689999997654 55654
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.80 E-value=1.4e-06 Score=73.37 Aligned_cols=188 Identities=16% Similarity=0.195 Sum_probs=127.2
Q ss_pred eeeeecc--ccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEE
Q 018784 96 KHSFEHK--HIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (350)
Q Consensus 96 ~~~~~h~--~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iw 173 (350)
+..+.|. .....+.|+. +.+..+.+.++.|+++|+.+++..... .....-...++. .+++++.....++.+.++
T Consensus 46 v~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEE
T ss_pred EEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEE
Confidence 3445554 3457888874 566778888899999999887665444 222211223443 356677777788999999
Q ss_pred ECCCCceeEeecCCCCeEEEEEecCCcEEEEEc-CCcEEEEECCCcceeeeeecCCCCce----eEecCCCCcEEEEecC
Q 018784 174 DARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMPCNTES----ASLEPKLGNIFIAGGE 248 (350)
Q Consensus 174 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~sg~~ 248 (350)
|..+.+.+.++.....-..+ +++++.|..++ .+.|.++|..+++.+..+........ ..+...++++++....
T Consensus 122 D~~Tl~~~~ti~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~ 199 (268)
T 3nok_A 122 SGMPPQRERTTRYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWH 199 (268)
T ss_dssp ETTTTEEEEEEECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred ECCcCcEEEEEeCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECC
Confidence 99999999988865432333 35566665554 56899999999988877765432211 1122225788888878
Q ss_pred CCeEEEEEcccCeeEEeecCC-------------CcCEEEEEEcCCC-CEEEEec
Q 018784 249 DMWVHVFDFHTGEQIGCNKGH-------------HGPVHCVRFSPGG-ESYASGS 289 (350)
Q Consensus 249 d~~i~v~d~~~~~~~~~~~~h-------------~~~v~~l~~sp~~-~~lasgs 289 (350)
+..|.+.|..+|+.+..+... ....+.|++.|++ ++++||-
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 899999999999987765321 1356899999975 4566664
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=1.8e-06 Score=72.68 Aligned_cols=183 Identities=13% Similarity=0.156 Sum_probs=125.5
Q ss_pred ccCCceeEEEecccCCCccEEEEEeCCC--CeeEeeCCCCceeeeccCccCC-eEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 14 GHSRPVVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 14 gH~~~v~~~~~~~~s~dg~~lasgs~d~--~v~iw~~~~~~~~~~l~gH~~~-V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.-......+.|+ ++.+..+.+.++ .|+.+|+++++.+..+.-.... --.+++.. +++.+....++.+.++|.
T Consensus 40 d~~~ftqGL~~~----~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 40 DTKAFTEGFFYR----NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp CTTCEEEEEEEE----TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEET
T ss_pred CCCcccceEEEE----CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEEeeCCEEEEEEC
Confidence 334456788887 577778887776 8999999999998877543221 12344443 345555678999999999
Q ss_pred CCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecC----CCCcEEEEEEeCCCCcEEEEEeC
Q 018784 91 LTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN----SSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 91 ~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
.+.+.+.++..... ...++++++.|+....++.|.++|..+.+........ .-..+..+.|. ++.+++....
T Consensus 115 ~t~~~~~ti~~~~e--G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~ 190 (262)
T 3nol_A 115 RNLRQVRSFNYDGE--GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQ 190 (262)
T ss_dssp TTCCEEEEEECSSC--CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT
T ss_pred ccCcEEEEEECCCC--ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEcc
Confidence 99998888876542 2344467777777766888999998765433222111 11234456665 5677777777
Q ss_pred CCeEEEEECCCCceeEeecCC-------------CCeEEEEEecCCcE-EEEE
Q 018784 167 SGGVRLWDARSGKIVQTLETK-------------SPVTSAEVSRDGRY-ITTA 205 (350)
Q Consensus 167 dg~i~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~~~ 205 (350)
++.|.+.|.++++.+..+... .-.+.++++|+++. ++++
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 889999999999998887642 23578999997654 4554
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.79 E-value=2.1e-06 Score=81.84 Aligned_cols=268 Identities=13% Similarity=0.061 Sum_probs=154.1
Q ss_pred EEEEEeC-CCCeeEeeC-CCCceeeeccCccC----------Ce-EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee
Q 018784 33 FLVSASK-DSSPMLRNG-ETGDWIGTFEGHKG----------AV-WSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (350)
Q Consensus 33 ~lasgs~-d~~v~iw~~-~~~~~~~~l~gH~~----------~V-~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~ 99 (350)
.|..++. ++.+.-.|. .+|+.+..++-... .+ ..+++ .+..++.++.|+.+..+|..+++.+...
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 4455566 889999999 89998876543211 00 11222 2445566778999999999999988776
Q ss_pred eccc-----cEeE-EEEcCCCCeEEEeeC------CCeEEEEECCCCCCCCeeecCC-----------------------
Q 018784 100 EHKH-----IVRA-CAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNS----------------------- 144 (350)
Q Consensus 100 ~h~~-----~V~~-~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~~~----------------------- 144 (350)
.... .+.+ ... .++ .++.++. ++.|..+|..+++...+.....
T Consensus 142 ~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~ 219 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp ECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred cCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccc
Confidence 4322 1211 011 134 4555544 7899999998766433221110
Q ss_pred -------------CCcE-EEEEEeCCCCcEEEEEeC-----------C----CeEEEEECCCCceeEeecCC--------
Q 018784 145 -------------SGSI-RTVAWLHSDQTILSSCTD-----------S----GGVRLWDARSGKIVQTLETK-------- 187 (350)
Q Consensus 145 -------------~~~v-~~~~~~~~~~~~~~s~~~-----------d----g~i~iwd~~~~~~~~~~~~~-------- 187 (350)
.+.+ ..+++.+..+.+++..++ | +.|..+|.++|+.+...+..
T Consensus 220 g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~ 299 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA 299 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred ccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccc
Confidence 0000 123344444544443321 2 36999999999988877532
Q ss_pred ---CCeEEEEEecCCc---EEE-EEcCCcEEEEECCCcceeeeeecCCCC------------------------------
Q 018784 188 ---SPVTSAEVSRDGR---YIT-TADGSSVKFWDANHFGLVKGYNMPCNT------------------------------ 230 (350)
Q Consensus 188 ---~~v~~~~~~~~~~---~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~~------------------------------ 230 (350)
.++ -+....+|+ +++ ...++.+.++|..+++.+..+......
T Consensus 300 ~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~ 378 (571)
T 2ad6_A 300 GVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNI 378 (571)
T ss_dssp CCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEE
T ss_pred cCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEE
Confidence 122 122234674 343 445789999999988877655432200
Q ss_pred ----------ceeEecCCCCcEEEEe------------------------------------cCCCeEEEEEcccCeeEE
Q 018784 231 ----------ESASLEPKLGNIFIAG------------------------------------GEDMWVHVFDFHTGEQIG 264 (350)
Q Consensus 231 ----------~~~~~~~~~~~~l~sg------------------------------------~~d~~i~v~d~~~~~~~~ 264 (350)
....+.+..+.+++.. ..++.|..||+.+|+.+-
T Consensus 379 ~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W 458 (571)
T 2ad6_A 379 CPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKW 458 (571)
T ss_dssp SSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEE
T ss_pred CCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEE
Confidence 0122333333333321 135789999999998765
Q ss_pred eecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCccc
Q 018784 265 CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEE 306 (350)
Q Consensus 265 ~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~ 306 (350)
..... ..+....+...+..++.++.|+.|+.||..+.+..-
T Consensus 459 ~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 459 TKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 44321 122222223345567779999999999988776653
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=1.1e-06 Score=82.34 Aligned_cols=189 Identities=12% Similarity=0.113 Sum_probs=125.7
Q ss_pred CCCCeEEEee-CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEe--CCCCcEEEEE-----------------eCCCeEE
Q 018784 112 EDTHLLLTGG-FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL--HSDQTILSSC-----------------TDSGGVR 171 (350)
Q Consensus 112 ~~~~~l~sg~-~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~s~-----------------~~dg~i~ 171 (350)
+||++++... .+..|.+.|+...+............+..+++. |..+.+++++ ..++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3778776654 466799999986543221122222346677764 4445454443 3446899
Q ss_pred EEECCCCceeEeecCCCCeEEEEEecCCcEEEEEc-C--------------------------------------CcEEE
Q 018784 172 LWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-G--------------------------------------SSVKF 212 (350)
Q Consensus 172 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------------------------------------~~i~v 212 (350)
++|..+.+...++........+.++|+|+++.+++ + +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 99999999888887543456678899998876543 1 13777
Q ss_pred EECCC--cce-eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCe------------eEEeecCCCcCEEEEE
Q 018784 213 WDANH--FGL-VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE------------QIGCNKGHHGPVHCVR 277 (350)
Q Consensus 213 wd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~------------~~~~~~~h~~~v~~l~ 277 (350)
.|.++ ... +..+..+..+..+.+.|+...+++++..+.+|.++|+.+.+ .+.... -......++
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~a 337 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTA 337 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEE
Confidence 78776 333 44555555566777777644566677778999999998653 222222 233578999
Q ss_pred EcCCCCEEEEecCCCcEEEecCCC
Q 018784 278 FSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 278 ~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
|+|+|..+.+.-.|+.|.+||+..
T Consensus 338 F~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 338 FDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ECCCCeEEEEEecCCcEEEEEhhH
Confidence 999995566788899999999865
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.78 E-value=9.2e-06 Score=77.50 Aligned_cols=254 Identities=16% Similarity=0.110 Sum_probs=149.2
Q ss_pred ccEEEEEeCCCCeeEeeCCCCceeeeccCcc--C--CeE---EEEEC-CCCc-EEEEee------CCCeEEEeeCCCCCe
Q 018784 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHK--G--AVW---SCCLD-ANAL-FSASGS------ADFTAKLWDALTGDE 95 (350)
Q Consensus 31 g~~lasgs~d~~v~iw~~~~~~~~~~l~gH~--~--~V~---~v~~~-~~~~-~l~s~s------~Dg~v~vWd~~~~~~ 95 (350)
+..|..++.|+.+.-.|.++|+.+....... . .+. .+.-. .+++ .++.++ .++.|..+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 3466778889999999999999876654321 0 111 11111 1232 444544 389999999999998
Q ss_pred eeeeecccc-E-----------------------------------------eEEEEcCCCCeEEEeeC-----------
Q 018784 96 KHSFEHKHI-V-----------------------------------------RACAFSEDTHLLLTGGF----------- 122 (350)
Q Consensus 96 ~~~~~h~~~-V-----------------------------------------~~~~~~~~~~~l~sg~~----------- 122 (350)
+........ + ...++.|...+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 776532110 0 12455566667765542
Q ss_pred ---------C----CeEEEEECCCCCCCCeeec-CCCC-------cEEEEEEeCCCC---cEEEEEeCCCeEEEEECCCC
Q 018784 123 ---------E----KILRIFDLNRPDAPPREVG-NSSG-------SIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSG 178 (350)
Q Consensus 123 ---------d----~~v~vwd~~~~~~~~~~~~-~~~~-------~v~~~~~~~~~~---~~~~s~~~dg~i~iwd~~~~ 178 (350)
| +.|..+|+.+++....... ++.. ...-+.....++ .+++.++.+|.++++|.++|
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5788999887765544322 2211 111111110233 46778889999999999999
Q ss_pred ceeEeecCCCC----------------------------------------------eEEEEEecCCcEE-EEE------
Q 018784 179 KIVQTLETKSP----------------------------------------------VTSAEVSRDGRYI-TTA------ 205 (350)
Q Consensus 179 ~~~~~~~~~~~----------------------------------------------v~~~~~~~~~~~l-~~~------ 205 (350)
+.+........ ...++++|+..++ +..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 98766543210 0123445543322 211
Q ss_pred ---------------------------cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 206 ---------------------------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 206 ---------------------------~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
..+.|..||+.+++.+..+..........+.. .+.+++.|+.|+.++.||.+
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEEETT
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEEECC
Confidence 14678999999988776655432222111111 25677779999999999999
Q ss_pred cCeeEEeecCCCcC-EEEEEEcCCCCEE
Q 018784 259 TGEQIGCNKGHHGP-VHCVRFSPGGESY 285 (350)
Q Consensus 259 ~~~~~~~~~~h~~~-v~~l~~sp~~~~l 285 (350)
+|+.+-.+....+. ..-+.|..+|+.+
T Consensus 516 tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 516 SGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp TCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCCEEEEecCCCCcccCceEEEECCEEE
Confidence 99998766543221 1225566677643
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.78 E-value=4e-06 Score=73.70 Aligned_cols=235 Identities=9% Similarity=0.038 Sum_probs=140.4
Q ss_pred eccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeecc------------C--------ccCCeEEEEECC-
Q 018784 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE------------G--------HKGAVWSCCLDA- 71 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~------------g--------H~~~V~~v~~~~- 71 (350)
.|......++++++ +|.++.++..++.|..|+..+++... +. + .......+++++
T Consensus 15 ~g~~~~p~~i~~d~---~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 15 EAPSYAPNSFTFDS---TNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp ECSSSCCCCEECCT---TCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred CCccCCceEEEEcC---CCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCC
Confidence 34334455676665 88877788888999999887655432 21 0 113567889987
Q ss_pred CCcEEEEeeCCCeEEEeeCCCCCeeeeee-----ccccEeEEEEcC-CCCeEEEeeC-----------------CCeEEE
Q 018784 72 NALFSASGSADFTAKLWDALTGDEKHSFE-----HKHIVRACAFSE-DTHLLLTGGF-----------------EKILRI 128 (350)
Q Consensus 72 ~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-----h~~~V~~~~~~~-~~~~l~sg~~-----------------d~~v~v 128 (350)
++.++++. ..+.|..+|..++....... .-..+..+++.+ +|.+.++-.. ++.|..
T Consensus 91 ~g~l~v~d-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVD-CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEE-TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEE-CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 77766653 34458888876543221111 113468899999 8977665432 366888
Q ss_pred EECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCC---ceeEeecCCCCeEEEEEecCCcEEEEE
Q 018784 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSG---KIVQTLETKSPVTSAEVSRDGRYITTA 205 (350)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (350)
||....... ...........+++.+++..++++-...+.|..+++... .......... ...+++.++|++.++.
T Consensus 170 ~d~~~~~~~--~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 170 YDPSTKETT--LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EETTTTEEE--EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred EeCCCCEEE--EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 887543211 111111223457777655557777666789999998742 2111111223 6778999999877665
Q ss_pred cC-----------CcEEEEECCCcceeeeeecCC----C-CceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 206 DG-----------SSVKFWDANHFGLVKGYNMPC----N-TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 206 ~~-----------~~i~vwd~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
.. +.|..+|.. ++.+..+..+. . ...+.+ ..++++++....+.|.++++.
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred cCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence 33 457888864 45555555442 1 122222 346777777778888888875
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.76 E-value=5e-06 Score=73.11 Aligned_cols=230 Identities=12% Similarity=0.019 Sum_probs=136.9
Q ss_pred EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee--------------------ccccEeEEEEcC-CCCeEEEeeCC
Q 018784 65 WSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE--------------------HKHIVRACAFSE-DTHLLLTGGFE 123 (350)
Q Consensus 65 ~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~--------------------h~~~V~~~~~~~-~~~~l~sg~~d 123 (350)
..+++++++.++.++..++.|..|+..++....... ....+..+++.+ ++. |+.+...
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~ 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCY 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECC
Confidence 456788888866777888999999987654322110 013478899998 555 5555445
Q ss_pred CeEEEEECCCCCCCCeeec----CCCCcEEEEEEeCCCCcEEEEEeC-----------------CCeEEEEECCCCceeE
Q 018784 124 KILRIFDLNRPDAPPREVG----NSSGSIRTVAWLHSDQTILSSCTD-----------------SGGVRLWDARSGKIVQ 182 (350)
Q Consensus 124 ~~v~vwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~s~~~-----------------dg~i~iwd~~~~~~~~ 182 (350)
+.+..+|...+... .... ........+++.+.++.++++-.. ++.|..+|..+++...
T Consensus 101 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 55888886533211 1110 111245677776514556655432 3678889987776433
Q ss_pred eecCCCCeEEEEEecCCcEEEEE--cCCcEEEEECCCcc--eeeee-ecCCCCceeEecCCCCcEEEEecC---------
Q 018784 183 TLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFG--LVKGY-NMPCNTESASLEPKLGNIFIAGGE--------- 248 (350)
Q Consensus 183 ~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~vwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~--------- 248 (350)
....-...+.+++++++++|..+ ..+.|..|++.... ....+ ..+. +..+.+.+ +++++++...
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSC
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCC
Confidence 32222334568999999855433 34689999986421 11111 1222 33444444 4677776654
Q ss_pred -CCeEEEEEcccCeeEEeecCC----CcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 249 -DMWVHVFDFHTGEQIGCNKGH----HGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 249 -d~~i~v~d~~~~~~~~~~~~h----~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
.+.|..+|. .++.+..+... ...+.++++ .++.++++....+.|..+++.
T Consensus 258 ~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 258 VDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 466888886 46666555432 234667777 467777777788899999874
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.75 E-value=7.4e-07 Score=86.52 Aligned_cols=258 Identities=12% Similarity=0.062 Sum_probs=141.2
Q ss_pred CccEEEEEeCCC-----------CeeEeeCCCCceee--ecc-CccCCeEEEEECCCCcEEEEee-CCCeEEEeeCCCCC
Q 018784 30 DGFFLVSASKDS-----------SPMLRNGETGDWIG--TFE-GHKGAVWSCCLDANALFSASGS-ADFTAKLWDALTGD 94 (350)
Q Consensus 30 dg~~lasgs~d~-----------~v~iw~~~~~~~~~--~l~-gH~~~V~~v~~~~~~~~l~s~s-~Dg~v~vWd~~~~~ 94 (350)
+|++++.|+.+. .+.+||..++++.. .+. .+.....++++..++++++.|| .+..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 788889887653 47789998887643 222 2323333467778899988888 45689999987764
Q ss_pred eeee--eeccccEeEEEEcCCCCeEEEee-CC-----CeEEEEECCCCCCCCe-----eecCCCCcEEEEEEeCCCCcEE
Q 018784 95 EKHS--FEHKHIVRACAFSEDTHLLLTGG-FE-----KILRIFDLNRPDAPPR-----EVGNSSGSIRTVAWLHSDQTIL 161 (350)
Q Consensus 95 ~~~~--~~h~~~V~~~~~~~~~~~l~sg~-~d-----~~v~vwd~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~ 161 (350)
-... +.....-.+++..+++++++.|+ .+ ..+.+||..+...... ........ ...+ ..++.++
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~--~~~~-~~~~~iy 353 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK--QGLY-RSDNHAW 353 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT--TGGG-TTTCSCC
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc--ccee-ecCCceE
Confidence 2221 12222223556667899999988 44 5689999865321110 00000000 0000 1123333
Q ss_pred EEEeCC---------CeEEEEECCCCceeEeecCC----------CCeEEEEEe-cCCcEEEEEc-C--------C---c
Q 018784 162 SSCTDS---------GGVRLWDARSGKIVQTLETK----------SPVTSAEVS-RDGRYITTAD-G--------S---S 209 (350)
Q Consensus 162 ~s~~~d---------g~i~iwd~~~~~~~~~~~~~----------~~v~~~~~~-~~~~~l~~~~-~--------~---~ 209 (350)
+.++.+ ..+..||..+..-....... ..-.++.+. .++++++.+. + . .
T Consensus 354 v~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 354 LFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp EEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 333322 46788998776533222111 112233333 3677766543 1 1 5
Q ss_pred EEEEECCCcceeeee--ecCCCCce-eEecCCCCcEEEEecCC-----------CeEEEEEcccCeeE--EeecCCCcCE
Q 018784 210 VKFWDANHFGLVKGY--NMPCNTES-ASLEPKLGNIFIAGGED-----------MWVHVFDFHTGEQI--GCNKGHHGPV 273 (350)
Q Consensus 210 i~vwd~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~l~sg~~d-----------~~i~v~d~~~~~~~--~~~~~h~~~v 273 (350)
|.+||..+....... .++..... ......++++++.|+.+ ..+.+||..+.+-. ..+......-
T Consensus 434 v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~h 513 (656)
T 1k3i_A 434 ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYH 513 (656)
T ss_dssp EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTT
T ss_pred EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccc
Confidence 778887765443322 33332221 21222368999999865 46899998775422 1111111112
Q ss_pred EEEEEcCCCCEEEEecC
Q 018784 274 HCVRFSPGGESYASGSE 290 (350)
Q Consensus 274 ~~l~~sp~~~~lasgs~ 290 (350)
.+..+.|++++++.|+.
T Consensus 514 s~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 514 SISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEEECTTSCEEEEECC
T ss_pred cHhhcCCCcEEEecCCC
Confidence 34556799999999985
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=2.7e-06 Score=71.70 Aligned_cols=179 Identities=11% Similarity=0.044 Sum_probs=125.1
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCe--EEEEECCCCcEEEEeeCCCeEEEeeCCCC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDANALFSASGSADFTAKLWDALTG 93 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V--~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~ 93 (350)
......+.|+ ++.+..+.+.++.|+.+|+++++.+..+ - .... -.+++..+ ++.+....++.+.++|..+.
T Consensus 54 ~~ftqGL~~~----~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 54 NAFTQGLVFH----QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp TCCEEEEEEE----TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTT
T ss_pred ccccceEEEE----CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcC
Confidence 3455788887 5778888899999999999999998776 2 2222 33566544 45555678999999999999
Q ss_pred CeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec-CC---CCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 94 DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 94 ~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
+.+.++.....-..+ .++++.|+.+..++.|.++|..+.+....... .. -..+..+.|. ++.+++....+..
T Consensus 127 ~~~~ti~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~ 202 (268)
T 3nok_A 127 QRERTTRYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSD 202 (268)
T ss_dssp EEEEEEECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSE
T ss_pred cEEEEEeCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCe
Confidence 988887655433344 46678887777789999999876543322111 11 1234566766 5567777777889
Q ss_pred EEEEECCCCceeEeecCC--------------CCeEEEEEecCC-cEEEEE
Q 018784 170 VRLWDARSGKIVQTLETK--------------SPVTSAEVSRDG-RYITTA 205 (350)
Q Consensus 170 i~iwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~-~~l~~~ 205 (350)
|.+.|.++++.+..+... .-.+.++++|++ ++++++
T Consensus 203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999999988877542 245778888865 455555
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.67 E-value=1.5e-05 Score=66.42 Aligned_cols=181 Identities=14% Similarity=0.105 Sum_probs=122.8
Q ss_pred CCceeEEEecccCCCccEEEEEeCCC--CeeEeeCCCCceeeeccCccCC-eEEEEECCCCcEEEEeeCCCeEEEeeCCC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLWDALT 92 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~--~v~iw~~~~~~~~~~l~gH~~~-V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~ 92 (350)
...+..+.|+ ++.+..+.+.++ .|+.+|+++++.+..+.-.... --.+++.. +++.+....++.+.++|..+
T Consensus 20 ~~ftqGL~~~----~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 20 TAFTEGLFYL----RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp TCCEEEEEEE----TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred ccccccEEEE----CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCc
Confidence 4567799998 366777777754 7999999999998876532221 12344433 45556677899999999999
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeec-CC---CCcEEEEEEeCCCCcEEEEEeCCC
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSCTDSG 168 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~~~s~~~dg 168 (350)
.+.+.++.....-..+ .++++.|+++..++.|.++|..+.+....... .. -..+..+.|. ++.+++....+.
T Consensus 95 l~~~~ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~ 170 (243)
T 3mbr_X 95 LTPRARFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTS 170 (243)
T ss_dssp TEEEEEEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTT
T ss_pred CcEEEEEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCC
Confidence 9988888765543444 45677777776788999999876543322211 11 1234556665 566777776778
Q ss_pred eEEEEECCCCceeEeecCC--------------CCeEEEEEecCCc-EEEEE
Q 018784 169 GVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGR-YITTA 205 (350)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~-~l~~~ 205 (350)
.|.+.|+++++.+..+... .-.+.++++|+++ +++++
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 9999999999988877532 2357788888654 44554
No 260
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.63 E-value=3.4e-06 Score=76.55 Aligned_cols=177 Identities=13% Similarity=0.142 Sum_probs=119.7
Q ss_pred CCccEEEEEeCC------CCeeEeeCCCCceeeeccC--ccCC-eEEEEECCCCcEEEEee-------------------
Q 018784 29 PDGFFLVSASKD------SSPMLRNGETGDWIGTFEG--HKGA-VWSCCLDANALFSASGS------------------- 80 (350)
Q Consensus 29 ~dg~~lasgs~d------~~v~iw~~~~~~~~~~l~g--H~~~-V~~v~~~~~~~~l~s~s------------------- 80 (350)
|+| +++++..+ +.+.+.|.++++.+.+++- +... -+.+.|+|+++.++|..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 588 66666655 6799999999999998863 2211 23467799999988874
Q ss_pred CCCeEEEeeCCCCCeeeeeecc---ccEeEEEE--cCCCCeEEEee------CCCeEEEEECCCCCCC--------Ce--
Q 018784 81 ADFTAKLWDALTGDEKHSFEHK---HIVRACAF--SEDTHLLLTGG------FEKILRIFDLNRPDAP--------PR-- 139 (350)
Q Consensus 81 ~Dg~v~vWd~~~~~~~~~~~h~---~~V~~~~~--~~~~~~l~sg~------~d~~v~vwd~~~~~~~--------~~-- 139 (350)
.+.+|.+||+.+++...++.-. ...+.+.| +|+++++++++ .+++|.+|..+.+... ..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 3799999999987766666542 34566766 99999888776 4567766543321100 00
Q ss_pred --ee-------cCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCC---CceeEeecCCC---------------CeEE
Q 018784 140 --EV-------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS---GKIVQTLETKS---------------PVTS 192 (350)
Q Consensus 140 --~~-------~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~---~~~~~~~~~~~---------------~v~~ 192 (350)
.+ .........+..+++++.++++.-..+.|.++|+.. .+.+..+.... .-..
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 00 000234667888888888888888889999999853 34555554331 2467
Q ss_pred EEEecCCcEEEEEc
Q 018784 193 AEVSRDGRYITTAD 206 (350)
Q Consensus 193 ~~~~~~~~~l~~~~ 206 (350)
+.++|||++|.+++
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 88999999887664
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00052 Score=67.82 Aligned_cols=275 Identities=11% Similarity=0.018 Sum_probs=161.1
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeecc--------------CccCCeEEEEECCCCcEEEEeeCC
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--------------GHKGAVWSCCLDANALFSASGSAD 82 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~--------------gH~~~V~~v~~~~~~~~l~s~s~D 82 (350)
..|.++...+ +|.+.+ |+..+-+.+++..+++...... -....|.++..+.++.+.+ |..+
T Consensus 258 ~~i~~i~~d~---~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~ 332 (781)
T 3v9f_A 258 SYIFSIKQLK---DNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWG 332 (781)
T ss_dssp CCEEEEEECT---TSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBS
T ss_pred ceEEEEEECC---CCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecC
Confidence 4577776654 666544 5664567888877655432111 1346799999999888765 4456
Q ss_pred CeEEEeeCCCCCeeeeee----------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCee--ecCCCCcEEE
Q 018784 83 FTAKLWDALTGDEKHSFE----------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE--VGNSSGSIRT 150 (350)
Q Consensus 83 g~v~vWd~~~~~~~~~~~----------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~--~~~~~~~v~~ 150 (350)
+-|..++..+........ ....|.++...+++. |..|..++.+..|+..+....... .......|.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 778888876554322210 234689998888776 455666667888887532111000 0123456778
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec---CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecC
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP 227 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~ 227 (350)
+...+ ++.+.+ |+.++.|..+|.++++...... ....|.++...+++.+.++.. +.+..||..+..........
T Consensus 412 i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 412 SLKDS-EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEECT-TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTT
T ss_pred EEECC-CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCc
Confidence 76543 444444 4555779999988776433221 235688888888898887766 57888998765433222111
Q ss_pred -----CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--C-CCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 228 -----CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--G-HHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 228 -----~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
............+.+. .|+.++-+..||..+++...... + ....|.++...++|.+.++.. +|.|..||.
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~ 566 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSA 566 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCT
T ss_pred ccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECC
Confidence 1112222222334544 45554447778876654332211 1 235689999988888666544 776688876
Q ss_pred CCC
Q 018784 300 NPP 302 (350)
Q Consensus 300 ~~~ 302 (350)
...
T Consensus 567 ~~~ 569 (781)
T 3v9f_A 567 RNF 569 (781)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.59 E-value=2.7e-05 Score=74.34 Aligned_cols=190 Identities=13% Similarity=0.089 Sum_probs=111.3
Q ss_pred EEEEEeC-CCCeeEeeC-CCCceeeeccCccCC-----------eEEEEECC-CCc---EEEEeeCCCeEEEeeCCCCCe
Q 018784 33 FLVSASK-DSSPMLRNG-ETGDWIGTFEGHKGA-----------VWSCCLDA-NAL---FSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 33 ~lasgs~-d~~v~iw~~-~~~~~~~~l~gH~~~-----------V~~v~~~~-~~~---~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
.|..++. ++.+.-+|. .+|+.+..++-.... ...+++.| ++. .++.++.|+.+..+|..+++.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 4555666 888999999 899988766432210 12334432 222 256678899999999999998
Q ss_pred eeeeeccc-----cEeE-EEEcCCCCeEEEee------CCCeEEEEECCCCCCCCeeecCCC------------------
Q 018784 96 KHSFEHKH-----IVRA-CAFSEDTHLLLTGG------FEKILRIFDLNRPDAPPREVGNSS------------------ 145 (350)
Q Consensus 96 ~~~~~h~~-----~V~~-~~~~~~~~~l~sg~------~d~~v~vwd~~~~~~~~~~~~~~~------------------ 145 (350)
+....... .+.+ -.. .++ .++.++ .++.|..+|..+++...+......
T Consensus 144 ~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 144 VWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp EEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 87654221 1211 011 134 455554 378999999987664332211100
Q ss_pred ------------------CcE-EEEEEeCCCCcEEEEEeC---------------CCeEEEEECCCCceeEeecCCC---
Q 018784 146 ------------------GSI-RTVAWLHSDQTILSSCTD---------------SGGVRLWDARSGKIVQTLETKS--- 188 (350)
Q Consensus 146 ------------------~~v-~~~~~~~~~~~~~~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~--- 188 (350)
+.+ ..+++.+..+.+++..++ .+.|..+|.++|+.+...+...
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 001 123333444444443332 1489999999999988776421
Q ss_pred --------CeEEEEEe-cCC---cEEE-EEcCCcEEEEECCCcceeeeee
Q 018784 189 --------PVTSAEVS-RDG---RYIT-TADGSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 189 --------~v~~~~~~-~~~---~~l~-~~~~~~i~vwd~~~~~~~~~~~ 225 (350)
++. +... .+| ..++ ...++.+.++|.++++.+....
T Consensus 302 wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 302 WDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 121 2222 467 4444 4467899999999888776554
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.58 E-value=2e-05 Score=75.09 Aligned_cols=273 Identities=15% Similarity=0.142 Sum_probs=153.0
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCe---------EEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeee
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV---------WSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V---------~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~ 100 (350)
++.+.+ ++.++.+.-+|..+|+.+..+....... ..+++ .+..++.++.|+.|..+|..+++.+....
T Consensus 68 ~g~vyv-~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYV-TASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEE-EETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEEEE-EcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 555444 4443348889999999887765432210 11222 23455667789999999999999887654
Q ss_pred ccc-----cEe-EEEEcC---CCC-eEEEee------CCCeEEEEECCCCCCCCeeecCC--------------------
Q 018784 101 HKH-----IVR-ACAFSE---DTH-LLLTGG------FEKILRIFDLNRPDAPPREVGNS-------------------- 144 (350)
Q Consensus 101 h~~-----~V~-~~~~~~---~~~-~l~sg~------~d~~v~vwd~~~~~~~~~~~~~~-------------------- 144 (350)
-.. .+. +-.... +++ .+++++ .++.|..+|..+++.........
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 211 111 111111 222 566654 37889999987765432211100
Q ss_pred -------------------CC-cEEEEEEeCCCCcEEEEEeC-------------------C----CeEEEEECCCCcee
Q 018784 145 -------------------SG-SIRTVAWLHSDQTILSSCTD-------------------S----GGVRLWDARSGKIV 181 (350)
Q Consensus 145 -------------------~~-~v~~~~~~~~~~~~~~s~~~-------------------d----g~i~iwd~~~~~~~ 181 (350)
.+ .-..+++.+..+.+++..++ | +.|..+|.++|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 00 00123344444555544431 2 58999999999998
Q ss_pred EeecCC-----------CCeEEEEEe-cCCc---EEE-EEcCCcEEEEECCCcceeeeeecCCCC---------------
Q 018784 182 QTLETK-----------SPVTSAEVS-RDGR---YIT-TADGSSVKFWDANHFGLVKGYNMPCNT--------------- 230 (350)
Q Consensus 182 ~~~~~~-----------~~v~~~~~~-~~~~---~l~-~~~~~~i~vwd~~~~~~~~~~~~~~~~--------------- 230 (350)
...+.. .++. +... .+|+ +++ ...++.+.++|..+++.+..+......
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 887542 1221 1221 4663 444 446789999999988877655443100
Q ss_pred -------------------------------ceeEecCCCCcEEEEe--------------------------------c
Q 018784 231 -------------------------------ESASLEPKLGNIFIAG--------------------------------G 247 (350)
Q Consensus 231 -------------------------------~~~~~~~~~~~~l~sg--------------------------------~ 247 (350)
...++.+..+.+++.. .
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 0112222223333321 1
Q ss_pred CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCCcccC
Q 018784 248 EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPNHEEN 307 (350)
Q Consensus 248 ~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~ 307 (350)
.++.|..||+.+|+.+=...... ++..-.....+.+++.|+.|+.++.||..+.+.+-.
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 36789999999998764332211 121111122356777899999999999987776643
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.0005 Score=67.98 Aligned_cols=271 Identities=11% Similarity=0.075 Sum_probs=157.6
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccC-------ccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-------HKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~g-------H~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
..|.++...+ +|.+.+ |+.+ -+.+||..++++...... ....|+++....++.+.+.. ..+-|.++|
T Consensus 211 ~~i~~i~~d~---~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDT---NGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIAT-ELNGIMILD 284 (781)
T ss_dssp SSEEEEEECT---TCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEE-SSSCEEEEE
T ss_pred CceeEEEEcC---CCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEe-CCCCeEEEC
Confidence 4577776654 676655 4444 588899877665432211 23568999998888877643 335677888
Q ss_pred CCCCCeeeeee---------------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCee--------ecCCCC
Q 018784 90 ALTGDEKHSFE---------------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE--------VGNSSG 146 (350)
Q Consensus 90 ~~~~~~~~~~~---------------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~--------~~~~~~ 146 (350)
..+........ ....|.++...++|. |..|..++.|..++.......... ..-...
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 76554221111 235689998888876 566777777888887543211110 011235
Q ss_pred cEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee----cCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceee
Q 018784 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK 222 (350)
Q Consensus 147 ~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~ 222 (350)
.|.++...+ ++.+. .|+.++.|..+|..+++..... .....|.++...+++.+.++..++.+..+|..+.+..
T Consensus 364 ~v~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~- 440 (781)
T 3v9f_A 364 VVSSVCDDG-QGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ- 440 (781)
T ss_dssp CEEEEEECT-TSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-
T ss_pred ceEEEEEcC-CCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-
Confidence 677776543 34444 3455567999998765432211 1235688888888898888777677889998765432
Q ss_pred eeec---CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCC-----CcCEEEEEEcCCCCEEEEecCCCcE
Q 018784 223 GYNM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH-----HGPVHCVRFSPGGESYASGSEDGTI 294 (350)
Q Consensus 223 ~~~~---~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h-----~~~v~~l~~sp~~~~lasgs~Dg~v 294 (350)
.+.. +............+.+ ..|+. +-|.+||..+++........ ...|.++...++|.+.+....+| |
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l 517 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-V 517 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-E
T ss_pred EeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-E
Confidence 2221 1112222222223444 44555 56888998776543222111 45799999998888655433344 6
Q ss_pred EEecCC
Q 018784 295 RIWQTN 300 (350)
Q Consensus 295 ~vw~~~ 300 (350)
..++..
T Consensus 518 ~~~~~~ 523 (781)
T 3v9f_A 518 GIYTPD 523 (781)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 667654
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=0.0005 Score=61.97 Aligned_cols=224 Identities=7% Similarity=-0.106 Sum_probs=138.3
Q ss_pred CCCeeEeeCCCCceeeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCCCCeeeeee-ccccEeEEEEcCCCC-e
Q 018784 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTH-L 116 (350)
Q Consensus 40 d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h~~~V~~~~~~~~~~-~ 116 (350)
...|+..++........+.+. .....++|++ ++.++.+-...+.|..+++........+. .......+++.+.+. +
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred CccceeeccCCCcEEEEecCC-CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 356777787766554444443 3467899986 45666676677899999987665433332 223467788887554 4
Q ss_pred EEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-CeEEEEECCCCceeEeec-CCCCeEEEE
Q 018784 117 LLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPVTSAE 194 (350)
Q Consensus 117 l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~iwd~~~~~~~~~~~-~~~~v~~~~ 194 (350)
.++-...+.|.+.+++... ..............++..+.++.++.+-... +.|...++.......... .-...+.++
T Consensus 174 Y~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla 252 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT 252 (386)
T ss_dssp EEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEE
Confidence 4555667889988886432 2222333345678888887778888776665 788888886443322222 223467899
Q ss_pred EecCCcEE-EEE-cCCcEEEEECCCcceeeeeecC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec
Q 018784 195 VSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK 267 (350)
Q Consensus 195 ~~~~~~~l-~~~-~~~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~ 267 (350)
++|++..| .+. ..+.|..+|+............ ..+..+.+ ..+.++++-...+.|..+|..+|+.+..+.
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 253 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 99765544 333 3467999987643222111111 12333444 246788888888889888876776555544
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=0.00043 Score=62.40 Aligned_cols=230 Identities=7% Similarity=-0.050 Sum_probs=142.0
Q ss_pred EEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeE-EEeeCCCeEEEEECCCCCCCCeeecCC
Q 018784 66 SCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPPREVGNS 144 (350)
Q Consensus 66 ~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sg~~d~~v~vwd~~~~~~~~~~~~~~ 144 (350)
+.+..+.+.++++ ....|+..++........+.....+..++|.+.+..| ++-...+.|..+++..... .......
T Consensus 81 C~~~~~~~~l~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~ 157 (386)
T 3v65_B 81 CKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTG 157 (386)
T ss_dssp EEECSSCCEEEEE--CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECSS
T ss_pred ECCccccceeEee--cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeCC
Confidence 4445554545554 3467888888766544444444568899999765544 4555678899999874321 1222222
Q ss_pred CCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCcEE-EEEc-C-CcEEEEECCCcce
Q 018784 145 SGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYI-TTAD-G-SSVKFWDANHFGL 220 (350)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~-~-~~i~vwd~~~~~~ 220 (350)
......+++.+.++.++++-...+.|.+.++........+. .-.....++++|.+..| .+.. . +.|..+++.....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 23345667666677787777777889998886543333332 22456889999865544 4432 3 5688888764322
Q ss_pred eeeeecC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 221 VKGYNMP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 221 ~~~~~~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
....... ..+..+.+.+..+.++++-+..+.|..+|+........+.........|++ ..+.++++-...+.|..++.
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEEC
Confidence 2111111 124456677666788888888899999998654333333333445678888 45567777777888888874
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.42 E-value=4.3e-05 Score=74.11 Aligned_cols=234 Identities=14% Similarity=0.133 Sum_probs=126.3
Q ss_pred EEEECC-CCcEEEEeeCCC-----------eEEEeeCCCCCeee--eee--ccccEeEEEEcCCCCeEEEeeC-CCeEEE
Q 018784 66 SCCLDA-NALFSASGSADF-----------TAKLWDALTGDEKH--SFE--HKHIVRACAFSEDTHLLLTGGF-EKILRI 128 (350)
Q Consensus 66 ~v~~~~-~~~~l~s~s~Dg-----------~v~vWd~~~~~~~~--~~~--h~~~V~~~~~~~~~~~l~sg~~-d~~v~v 128 (350)
.+++.+ ++++++.||.+. .+.+||..+++-.. .+. +.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 345555 888888887653 68899988776322 222 2223345678899999999884 568999
Q ss_pred EECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe-CC-----CeEEEEECCCCceeEee-----cCCCCeEEEEEec
Q 018784 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT-DS-----GGVRLWDARSGKIVQTL-----ETKSPVTSAEVSR 197 (350)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~-~d-----g~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~ 197 (350)
||..+.+............-.+++.. +++++++.|+ .+ ..+.+||+.+.+-...- .....-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99864321100000111111123333 3556776666 34 46999999876522210 0000000001112
Q ss_pred CCcE-EEE---------EcCCcEEEEECCCcceeeeeecCC----------CCceeEecCCCCcEEEEecCCC-------
Q 018784 198 DGRY-ITT---------ADGSSVKFWDANHFGLVKGYNMPC----------NTESASLEPKLGNIFIAGGEDM------- 250 (350)
Q Consensus 198 ~~~~-l~~---------~~~~~i~vwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~sg~~d~------- 250 (350)
++++ +.. .....+..||..+........... ....+.+....+++++.|+.+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 2322 222 223467888887654332211110 1112222234678999998543
Q ss_pred ----eEEEEEcccCeeEEee--cCCCcC-EEEEEEcCCCCEEEEecCC-----------CcEEEecCC
Q 018784 251 ----WVHVFDFHTGEQIGCN--KGHHGP-VHCVRFSPGGESYASGSED-----------GTIRIWQTN 300 (350)
Q Consensus 251 ----~i~v~d~~~~~~~~~~--~~h~~~-v~~l~~sp~~~~lasgs~D-----------g~v~vw~~~ 300 (350)
.|.+||..+..-.... ..+... -.++...|++++++.|+.+ ..+.+||..
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC
Confidence 6788887765433222 222222 3456677899999999865 457888864
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.42 E-value=0.00085 Score=59.57 Aligned_cols=232 Identities=7% Similarity=-0.087 Sum_probs=140.4
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCCCCeeeeee-ccccEeE
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRA 107 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-h~~~V~~ 107 (350)
+..++++ ....|+..++........+.+. .....++|++ ++.++.+-...+.|..++.........+. .-.....
T Consensus 44 ~~~ll~~--~~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g 120 (349)
T 3v64_C 44 EPVLLFA--NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG 120 (349)
T ss_dssp CCEEEEE--CBSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred CceeEee--cccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccE
Confidence 4444443 3345777777665554444443 3467889986 45566666677899999987655333332 2244678
Q ss_pred EEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-CeEEEEECCCCceeEeec
Q 018784 108 CAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE 185 (350)
Q Consensus 108 ~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~iwd~~~~~~~~~~~ 185 (350)
+++.+.+. +.++-...+.|.+.+++... ..............+++.+.++.++.+-... +.|...++........+.
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 89987554 44555667899999987432 2222223345678888887778888776666 789888876433222222
Q ss_pred -CCCCeEEEEEecCCcEEE-EE-cCCcEEEEECCCcceeeeeecC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCe
Q 018784 186 -TKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFGLVKGYNMP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (350)
Q Consensus 186 -~~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~ 261 (350)
.-...+.++++|++..|. +. ..+.|..+|+............ ..+..+.+ ..+.++++-...+.|..++..+|+
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCC
Confidence 223467899998665443 33 3467999987643222111111 12333444 246777887778888888866666
Q ss_pred eEEeec
Q 018784 262 QIGCNK 267 (350)
Q Consensus 262 ~~~~~~ 267 (350)
.+..+.
T Consensus 278 ~~~~i~ 283 (349)
T 3v64_C 278 NQEIIR 283 (349)
T ss_dssp SCEEEE
T ss_pred ccEEec
Confidence 554443
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00017 Score=66.16 Aligned_cols=232 Identities=9% Similarity=0.041 Sum_probs=132.2
Q ss_pred EEEEECC-CCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeC-CC----eEEEEECCCCCCCC
Q 018784 65 WSCCLDA-NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGF-EK----ILRIFDLNRPDAPP 138 (350)
Q Consensus 65 ~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~-d~----~v~vwd~~~~~~~~ 138 (350)
..++++| +...|..+...+.|+.+|+.++..............++|++++++|+.+.. ++ .+.+++.. +....
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~ 218 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKV 218 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCS
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceee
Confidence 5778887 333333333348899999876654444444456889999999996665544 21 33334432 22211
Q ss_pred -eeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeE--eecCCCCeEEEEEecCCcEE-EEE-cCCcEEEE
Q 018784 139 -REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFW 213 (350)
Q Consensus 139 -~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l-~~~-~~~~i~vw 213 (350)
.... .......+++.+.++.++++-..++.|..+|...+.... ..........++++|++++| ++. ..+.|..+
T Consensus 219 ~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 219 ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 1111 122345666666577788877777899999998765422 22222346789999999854 443 35678887
Q ss_pred ECCC--cce--eeeeecC----C------------CCc-eeEec-------CCCCcEEEEecCCCeEEEEEcccCeeEEe
Q 018784 214 DANH--FGL--VKGYNMP----C------------NTE-SASLE-------PKLGNIFIAGGEDMWVHVFDFHTGEQIGC 265 (350)
Q Consensus 214 d~~~--~~~--~~~~~~~----~------------~~~-~~~~~-------~~~~~~l~sg~~d~~i~v~d~~~~~~~~~ 265 (350)
+... ... +..+... . .+. .+... ...+.++++-...+.|+.++ .+|.....
T Consensus 298 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~ 376 (430)
T 3tc9_A 298 DYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTF 376 (430)
T ss_dssp EEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEE
T ss_pred eCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEE
Confidence 6542 111 1111110 0 011 11111 12356677766677888887 34543322
Q ss_pred ec-------C--C--------CcCEEEEEEcC-CCCEEEEecCCCcEEEecC
Q 018784 266 NK-------G--H--------HGPVHCVRFSP-GGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 266 ~~-------~--h--------~~~v~~l~~sp-~~~~lasgs~Dg~v~vw~~ 299 (350)
.. + . -.....|++.| ++.++++-....+|+..+.
T Consensus 377 ~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 377 AGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 11 1 0 12578899998 5777777777788887764
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.39 E-value=0.001 Score=59.12 Aligned_cols=230 Identities=6% Similarity=-0.053 Sum_probs=141.0
Q ss_pred EEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCC
Q 018784 66 SCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNS 144 (350)
Q Consensus 66 ~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~ 144 (350)
|.+..+++.++++ ....|+..++........+.....+..++|.+....|+ +-...+.|..+++..... .......
T Consensus 38 C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~ 114 (349)
T 3v64_C 38 CKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTG 114 (349)
T ss_dssp EEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS
T ss_pred ccccccCceeEee--cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEEeCC
Confidence 4444454545554 34457777776554444444445588999997655554 545678899999875432 1222222
Q ss_pred CCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCc-EEEEEc-C-CcEEEEECCCcce
Q 018784 145 SGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGR-YITTAD-G-SSVKFWDANHFGL 220 (350)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~-~-~~i~vwd~~~~~~ 220 (350)
......+++.+.++.++++-...+.|.+.++........+. .-.....++++|.+. ++.+.. . +.|..+++.....
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence 23455677766677788887777899999987543332232 234568899998554 444433 3 5688888764322
Q ss_pred eeeeec-CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecC
Q 018784 221 VKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~ 299 (350)
...... -..+..+.+.+..+.++++-+..+.|..+|+........+.........|++ ..+.++++-...+.|...+.
T Consensus 195 ~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 195 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEc
Confidence 111111 1124456777667788888888899999998754333233333445677888 45666777777788888774
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.39 E-value=5.9e-05 Score=74.30 Aligned_cols=237 Identities=10% Similarity=-0.037 Sum_probs=126.1
Q ss_pred ceeEEEecccCCCccEEEEEeC-C----CCeeEeeCCCC-ceee-eccCccCCeEEEEECCCCcEEEEeeCC-----CeE
Q 018784 18 PVVDLFYSPITPDGFFLVSASK-D----SSPMLRNGETG-DWIG-TFEGHKGAVWSCCLDANALFSASGSAD-----FTA 85 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~-d----~~v~iw~~~~~-~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~D-----g~v 85 (350)
.+....||| |||++||-+.. + .+|+++|+.++ +.+. .+.. ....++|+||++.|+-...| ..|
T Consensus 175 ~~~~~~~S~--PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAP--PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECT--TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecC--CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 455666661 49988874432 2 24999999988 6432 1221 12356899999766655555 357
Q ss_pred EEeeCCCCCe--eeeee--ccccEeEEEEcCCCCeEEEee---CCCeEEEEECCCCCCCC--eee-cCCCCcEEEEEEeC
Q 018784 86 KLWDALTGDE--KHSFE--HKHIVRACAFSEDTHLLLTGG---FEKILRIFDLNRPDAPP--REV-GNSSGSIRTVAWLH 155 (350)
Q Consensus 86 ~vWd~~~~~~--~~~~~--h~~~V~~~~~~~~~~~l~sg~---~d~~v~vwd~~~~~~~~--~~~-~~~~~~v~~~~~~~ 155 (350)
.++++.++.. ...+. .......+.|+|++++|+..+ ....|.++|+.++.... ..+ ....+...++.|.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~- 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH- 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-
Confidence 8888877642 22322 234466789999999887654 23457888987653222 222 2233445556543
Q ss_pred CCCcEEEEEeCC----CeEEEEECCCCceeE--eecCCC--CeEEEEEecCCcEEEE-EcCC--cEEEEEC-------CC
Q 018784 156 SDQTILSSCTDS----GGVRLWDARSGKIVQ--TLETKS--PVTSAEVSRDGRYITT-ADGS--SVKFWDA-------NH 217 (350)
Q Consensus 156 ~~~~~~~s~~~d----g~i~iwd~~~~~~~~--~~~~~~--~v~~~~~~~~~~~l~~-~~~~--~i~vwd~-------~~ 217 (350)
.++.+++....+ ..|..+|+.++.... .+.... .+..+.+.. +.++++ ..++ .|.++|+ ..
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl~~~~~~~~~ 407 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMADSQDGVFKA 407 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEECCTTTSCCCT
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEecccccccccC
Confidence 355555554443 367777876532212 222322 234444442 233333 3455 4667775 22
Q ss_pred cceeeeeecCCCCceeEe------cCCCCcEEEEecCC---CeEEEEEcccCe
Q 018784 218 FGLVKGYNMPCNTESASL------EPKLGNIFIAGGED---MWVHVFDFHTGE 261 (350)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~------~~~~~~~l~sg~~d---~~i~v~d~~~~~ 261 (350)
....+.+.++.......+ ......++++.+.. ..++.+|+.+++
T Consensus 408 g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 408 GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 221333333332222233 12333454444432 467778877665
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.38 E-value=0.00072 Score=57.00 Aligned_cols=196 Identities=11% Similarity=0.134 Sum_probs=130.5
Q ss_pred eccCCceeEEEecccCCC-ccEEEEEeCCCCeeEeeCCCCceeeec--cCccCCeEEEEECCCCcEEEEeeCCCeEEEee
Q 018784 13 HGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGTF--EGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (350)
Q Consensus 13 ~gH~~~v~~~~~~~~s~d-g~~lasgs~d~~v~iw~~~~~~~~~~l--~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd 89 (350)
.|=.+.++.++|+| + +.+.++...++.|...|.. ++.++.+ .|. ...-.+++.+++.++++.-.++.+.+++
T Consensus 23 ~g~~~~lSGla~~~---~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 23 AGITNNISSLTWSA---QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp TTCCSCEEEEEEET---TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CCcccCcceeEEeC---CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 56566899999997 4 4555667778888888887 8877765 443 4456778888888877766778888887
Q ss_pred CCCCCee---eee-------eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC--CCCCCeee-------cCCCCcEEE
Q 018784 90 ALTGDEK---HSF-------EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR--PDAPPREV-------GNSSGSIRT 150 (350)
Q Consensus 90 ~~~~~~~---~~~-------~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~--~~~~~~~~-------~~~~~~v~~ 150 (350)
+...... ... ..+.....++|.|.++.|+++.......+|.+.. ........ .........
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 6543321 111 1234568999999997777776654555555431 00011111 112334678
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeecCC----------CCeEEEEEecCCcEEEEEcCCcEEEEE
Q 018784 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK----------SPVTSAEVSRDGRYITTADGSSVKFWD 214 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~~i~vwd 214 (350)
+++.+..+.+++.....+.|..+|.. ++.+..+... .....+++.++|++.+++..+.+..+.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 88888888888877788899999965 5555555432 256789999999988887766555553
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.00038 Score=63.81 Aligned_cols=232 Identities=10% Similarity=0.071 Sum_probs=134.3
Q ss_pred eEEEEECCC---CcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCC---Ce-EEEEECCCCCC
Q 018784 64 VWSCCLDAN---ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---KI-LRIFDLNRPDA 136 (350)
Q Consensus 64 V~~v~~~~~---~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d---~~-v~vwd~~~~~~ 136 (350)
-..++++++ +.++++-.. +.|+.+|..++...........+..++++++++++++-... .. +...+......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 357889874 666555333 89999998777655444444568999999999954443321 12 22333221111
Q ss_pred CCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee-c--CCCCeEEEEEecCCcEE-EEEc-CCcEE
Q 018784 137 PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-E--TKSPVTSAEVSRDGRYI-TTAD-GSSVK 211 (350)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l-~~~~-~~~i~ 211 (350)
...... .......+++.+.++.++++-..++.|+.+|..++.....+ . .......++++|+++.| ++.. .+.|+
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 001111 12234456666546777777767789999999877652222 1 12223469999999844 4433 46788
Q ss_pred EEECCC--cce--eeeeecC----------------CCCceeEec--------CCCCcEEEEecCCCeEEEEEcccCeeE
Q 018784 212 FWDANH--FGL--VKGYNMP----------------CNTESASLE--------PKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (350)
Q Consensus 212 vwd~~~--~~~--~~~~~~~----------------~~~~~~~~~--------~~~~~~l~sg~~d~~i~v~d~~~~~~~ 263 (350)
.++... ... +..+... ..+..+.+. ...++++++-...+.|+.++. +|...
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 877542 211 1111100 012223341 345678888888888999984 45433
Q ss_pred EeecCC------------------CcCEEEEEEc-CCCCEEEEecCCCcEEEecC
Q 018784 264 GCNKGH------------------HGPVHCVRFS-PGGESYASGSEDGTIRIWQT 299 (350)
Q Consensus 264 ~~~~~h------------------~~~v~~l~~s-p~~~~lasgs~Dg~v~vw~~ 299 (350)
++-+. -.....|++. +++.++++=...++|+..++
T Consensus 378 -t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 378 -TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 22111 1247889999 67877777777788888764
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.33 E-value=0.0017 Score=58.83 Aligned_cols=240 Identities=7% Similarity=-0.093 Sum_probs=143.8
Q ss_pred EEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCC----Ceeeeee-ccccEe
Q 018784 33 FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTG----DEKHSFE-HKHIVR 106 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~----~~~~~~~-h~~~V~ 106 (350)
+|+.+. ...|+..++........+. ....+.+++|++. +.+..+-...+.|+.+++... .....+. .-..+.
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 344333 3678888877665544443 3456778999874 555666566788999987642 1222222 334578
Q ss_pred EEEEcC-CCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC-CCeEEEEECCCCceeEee
Q 018784 107 ACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTL 184 (350)
Q Consensus 107 ~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-dg~i~iwd~~~~~~~~~~ 184 (350)
.+++.+ .+++.++-...+.|.+.+++... ..............++..+.++.++.+-.. .+.|...++........+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 899987 45555555667889999886432 222223334457888888777777776533 367888888644333322
Q ss_pred cC-CCCeEEEEEecCCcEEEEEc--CCcEEEEECCCcceeeeeecC---CCCceeEecCCCCcEEEEecCCCeEEEEEcc
Q 018784 185 ET-KSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (350)
Q Consensus 185 ~~-~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~ 258 (350)
.. -...+.+++++++..|..++ ...|..+|+............ ..+..+.+ ..+.++++-...+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcC
Confidence 22 24568899998765554433 467999998653322222211 12233333 346788888888889999977
Q ss_pred cCeeEEeecCCCcCEEEEE
Q 018784 259 TGEQIGCNKGHHGPVHCVR 277 (350)
Q Consensus 259 ~~~~~~~~~~h~~~v~~l~ 277 (350)
+|+.+..+.........+.
T Consensus 320 ~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 320 TGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp SCCCCEEEECSCSCEEEEE
T ss_pred CCCceEEEecCCCCCceEE
Confidence 7776655543333344443
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.0009 Score=61.29 Aligned_cols=197 Identities=10% Similarity=0.060 Sum_probs=114.1
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCC---Ce-EEEeeCCC
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---FT-AKLWDALT 92 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~D---g~-v~vWd~~~ 92 (350)
.....|+++|.+.+|.+.++-.. +.|+.++..+++...... .......+++++++.++++-... .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 34567878752113666555444 788889988777664433 44557899999999966654321 22 22233222
Q ss_pred CCe-eeeeeccccEeEEEEcC-CCCeEEEeeCCCeEEEEECCCCCCCCeee-cCCCCcEEEEEEeCCCCcEEEEEeCCCe
Q 018784 93 GDE-KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (350)
Q Consensus 93 ~~~-~~~~~h~~~V~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~~~dg~ 169 (350)
+.. ...+..-.....++++| ++.+.++-..++.|+.+|..++....... .........+++.+.++.++++-...+.
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 211 11222233456788999 66666566667889999886443211111 1112233468887766667777777789
Q ss_pred EEEEECC--CCcee--EeecC----------------CCCeEEEEE---------ecCCcEEEEEc-CCcEEEEEC
Q 018784 170 VRLWDAR--SGKIV--QTLET----------------KSPVTSAEV---------SRDGRYITTAD-GSSVKFWDA 215 (350)
Q Consensus 170 i~iwd~~--~~~~~--~~~~~----------------~~~v~~~~~---------~~~~~~l~~~~-~~~i~vwd~ 215 (350)
|+.++.. ++... ..+.. -.....+++ .+++.++++.. ++.|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 9998864 23210 11110 123456888 67777776654 467888885
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.30 E-value=0.00067 Score=58.93 Aligned_cols=192 Identities=13% Similarity=0.077 Sum_probs=113.9
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeC-CC-eEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSA-DF-TAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~-Dg-~v~vWd~~~~~~ 95 (350)
....+++++ +|+++++-..++.|..++... +....+.. ......+++++++.++++... ++ .|..+|..+++.
T Consensus 33 ~pegia~~~---~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAP---DGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECT---TSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECC---CCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 455777775 888888877888899898764 33333321 245778999999987766543 23 466667666654
Q ss_pred eeeee--ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCe---------eecCCCCcEEEEEEeCCCCcEEEEE
Q 018784 96 KHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR---------EVGNSSGSIRTVAWLHSDQTILSSC 164 (350)
Q Consensus 96 ~~~~~--h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~~s~ 164 (350)
..... .......++..+.+..+++-..++.|..+|......... .....-.....+ +++++.++++-
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 33322 122234555555555455555678888888753210000 000111223444 44556777777
Q ss_pred eCCCeEEEEECCC-Cce--eEeecCCCCeEEEEEecCCcEEEEEc-CCcEEEEECC
Q 018784 165 TDSGGVRLWDARS-GKI--VQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDAN 216 (350)
Q Consensus 165 ~~dg~i~iwd~~~-~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~vwd~~ 216 (350)
...+.|..+|+.. ++. ...+........++++++|+++++.. .+.|.++|..
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 7788999999864 321 11111112345688999998876654 5689999975
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.29 E-value=0.0016 Score=56.87 Aligned_cols=221 Identities=6% Similarity=-0.116 Sum_probs=134.4
Q ss_pred CCeeEeeCCCCceeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCC----CCeeeeee-ccccEeEEEEcCCC
Q 018784 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALT----GDEKHSFE-HKHIVRACAFSEDT 114 (350)
Q Consensus 41 ~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~----~~~~~~~~-h~~~V~~~~~~~~~ 114 (350)
..|+..++.+.+....+.. -....+++++++ +.++.+-...+.|..+++.. ......+. .-..+..+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 5688888877766554443 345678899875 55666766779999999865 22222222 22356788998755
Q ss_pred C-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-CeEEEEECCCCceeEee-c-CCCCe
Q 018784 115 H-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTL-E-TKSPV 190 (350)
Q Consensus 115 ~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~iwd~~~~~~~~~~-~-~~~~v 190 (350)
. +.++-...+.|.++++.... ..............++..+.++.++.+.... +.|...++.. .....+ . .-...
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWP 166 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCc
Confidence 4 44555667899999986422 1222222345678888877777777776554 6888888753 332322 1 23456
Q ss_pred EEEEEecCCcEEEEE--cCCcEEEEECCCcceeeeeec---CCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe
Q 018784 191 TSAEVSRDGRYITTA--DGSSVKFWDANHFGLVKGYNM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC 265 (350)
Q Consensus 191 ~~~~~~~~~~~l~~~--~~~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~ 265 (350)
+.+++++++..|..+ ..+.|..+|........-... ...+..+.+. .+.++++-...+.|..++..+|+.+..
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEE
Confidence 789999876554433 346899999864322111111 1223344443 367788888888899998877765544
Q ss_pred e
Q 018784 266 N 266 (350)
Q Consensus 266 ~ 266 (350)
+
T Consensus 245 i 245 (316)
T 1ijq_A 245 L 245 (316)
T ss_dssp E
T ss_pred E
Confidence 4
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=0.0022 Score=58.06 Aligned_cols=220 Identities=9% Similarity=-0.028 Sum_probs=138.1
Q ss_pred CCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEE-EeeCCCeEEEEECCCCC---CCCeeecCCCCcEEEEEEeCC
Q 018784 81 ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPD---APPREVGNSSGSIRTVAWLHS 156 (350)
Q Consensus 81 ~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~ 156 (350)
....|+..++........+..-..+..++|++....|+ +-...+.|..+++.... ...............+++...
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 35788888887665555555556789999998655554 44567889999886421 122222333455677887766
Q ss_pred CCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCc-EEEEEc--CCcEEEEECCCcceeeeeecC-CCCc
Q 018784 157 DQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGR-YITTAD--GSSVKFWDANHFGLVKGYNMP-CNTE 231 (350)
Q Consensus 157 ~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~--~~~i~vwd~~~~~~~~~~~~~-~~~~ 231 (350)
.+.++++-...+.|.+.++........+. .......++++|.+. ++.+.. ...|...++............ ..+.
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceE
Confidence 77788887777899999987654433333 234568899998554 444432 357888887653322111111 2345
Q ss_pred eeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 232 ~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.+.+.+..+.++++-+..+.|..+|+.......... +.-.....|++. .+.++.+-...+.|..++...
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSS
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCC
Confidence 567776677888888888899999986543322222 223345677773 445667777778888887433
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.25 E-value=0.002 Score=56.29 Aligned_cols=218 Identities=10% Similarity=-0.013 Sum_probs=133.3
Q ss_pred CCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeE-EEeeCCCeEEEEECCCC---CCCCeeecCCCCcEEEEEEeCCC
Q 018784 82 DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFEKILRIFDLNRP---DAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~sg~~d~~v~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
...|+..|+.+......+..-..+.+++|.+.+..| ++-..++.|..+++... ................+++.+.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 356888888776655445445567899999866544 45556789999998741 11112222222345677776567
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCCc-EEEEEcC--CcEEEEECCCcceeeeee-cC-CCCc
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGR-YITTADG--SSVKFWDANHFGLVKGYN-MP-CNTE 231 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~--~~i~vwd~~~~~~~~~~~-~~-~~~~ 231 (350)
+.++++-...+.|.+.|+........+. .......++++|.+. ++.+..+ +.|..+++..... +.+. .. ..+.
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~~~~~P~ 167 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPN 167 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEECCCCCce
Confidence 7777777777899999987544333332 234568899998554 4444433 5788888754322 1111 11 2234
Q ss_pred eeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 232 ~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.+.+.+..+.++++-+..+.|..+|+.......... ........|++. .+.++++-...+.|..++...
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 566776667888888888899999987432221112 223346777875 466677777788888887543
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.23 E-value=0.0022 Score=56.15 Aligned_cols=227 Identities=10% Similarity=0.012 Sum_probs=137.4
Q ss_pred CcEEEEeeCCCeEEEeeCCCCC--eeeeeeccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEE
Q 018784 73 ALFSASGSADFTAKLWDALTGD--EKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIR 149 (350)
Q Consensus 73 ~~~l~s~s~Dg~v~vWd~~~~~--~~~~~~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~ 149 (350)
..++++. ...|+..++.... ....+..-..+.+++|.+... +..+-...+.|..+++.............-....
T Consensus 5 p~ll~~~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 5 PLLLYAN--RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp CEEEEEC--EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred cEEEEEc--cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 3345543 5678888887653 222223334577899998544 4455566788999998754322222222223455
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee-cCCCCeEEEEEecC-CcEEEEEc--CCcEEEEECCCcceeeeee
Q 018784 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRD-GRYITTAD--GSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~--~~~i~vwd~~~~~~~~~~~ 225 (350)
.+++.+.++.++.+-...+.|.++++........+ ........+++.|. +.++.+.. ...|...++..........
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 67776667778777777789999998654332222 23345688999986 44444442 4678888875432111111
Q ss_pred cC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 226 MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 226 ~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
.. ..+..+.+.+..+.++++-+..+.|..+|+..........+.......+++. .+.++.+-...+.|..++....
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCC
Confidence 11 2234566777677888888888999999986433222223334456777775 3456667777788888886433
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.22 E-value=0.0035 Score=61.74 Aligned_cols=223 Identities=7% Similarity=-0.110 Sum_probs=135.6
Q ss_pred CCCeeEeeCCCCceeeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCCC----Ceeeeee-ccccEeEEEEcCC
Q 018784 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTG----DEKHSFE-HKHIVRACAFSED 113 (350)
Q Consensus 40 d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~----~~~~~~~-h~~~V~~~~~~~~ 113 (350)
...|+..++...+....+.+ ...+.++++++ ++.++++-...+.|+.+++... .....+. .-..+..|++.+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 35677777766555444443 35567889987 4566667667788999887642 1222222 3345678999887
Q ss_pred CCeE-EEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-CeEEEEECCCCceeEeecC-CCCe
Q 018784 114 THLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLET-KSPV 190 (350)
Q Consensus 114 ~~~l-~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-g~i~iwd~~~~~~~~~~~~-~~~v 190 (350)
+..| ++-...+.|.+.++.... ..............+++.+..+.++.+-... +.|...++........+.. -...
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc
Confidence 6544 455667899999987432 2223333445678898887777777775444 6788888865443333332 2457
Q ss_pred EEEEEecCCcEEEEEc--CCcEEEEECCCcceeeeeecC---CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEe
Q 018784 191 TSAEVSRDGRYITTAD--GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGC 265 (350)
Q Consensus 191 ~~~~~~~~~~~l~~~~--~~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~ 265 (350)
+.|++++.+..|..++ ...|..+++............ .....+.+ ..+.++++-...+.|...|..+|+.+..
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEE
Confidence 8899997655444333 457888988654332222211 12233333 3457888888888899888777755443
Q ss_pred e
Q 018784 266 N 266 (350)
Q Consensus 266 ~ 266 (350)
+
T Consensus 639 l 639 (791)
T 3m0c_C 639 L 639 (791)
T ss_dssp E
T ss_pred e
Confidence 3
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0019 Score=59.75 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=139.3
Q ss_pred eEEEEECCC--CcEEEEeeCCCeEEEeeCCCCCeeeeeec----cccEeEEEE-------cCCCCeEEEeeCCC------
Q 018784 64 VWSCCLDAN--ALFSASGSADFTAKLWDALTGDEKHSFEH----KHIVRACAF-------SEDTHLLLTGGFEK------ 124 (350)
Q Consensus 64 V~~v~~~~~--~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h----~~~V~~~~~-------~~~~~~l~sg~~d~------ 124 (350)
-..++++|. +.++++-...+.|++.|+.++.......- ....+.++| ++++..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 357888873 55666655557788889877654433321 235899999 99998666665543
Q ss_pred -eEEEEECCC-CCCC--C--eeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECC-------CCce-----------
Q 018784 125 -ILRIFDLNR-PDAP--P--REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR-------SGKI----------- 180 (350)
Q Consensus 125 -~v~vwd~~~-~~~~--~--~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~-------~~~~----------- 180 (350)
.|.+++... +... . ..... -.....++..+.++.++++...++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665432 1111 0 11111 12234555666678888888888999999987 4543
Q ss_pred ---eEeecCCCCeEEEEEecCCcEEE-EE-cCCcEEEEEC--CCcce--eeeeecC----------------CCCc-eeE
Q 018784 181 ---VQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDA--NHFGL--VKGYNMP----------------CNTE-SAS 234 (350)
Q Consensus 181 ---~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~vwd~--~~~~~--~~~~~~~----------------~~~~-~~~ 234 (350)
+..+........++++|+|++|. +. ....|+.+|. ..... ...+... ..+. .+.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 12222234457899999998543 33 3467888554 32211 0111100 0111 122
Q ss_pred ecC------CCCcEEEEecCCCeEEEEEcccCeeEEeecCC------------------------CcCEEEEEEcCC-CC
Q 018784 235 LEP------KLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGH------------------------HGPVHCVRFSPG-GE 283 (350)
Q Consensus 235 ~~~------~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h------------------------~~~v~~l~~sp~-~~ 283 (350)
... ..+.++++-+..+.|+.++ .+|. +.++-|. -.....|++.++ +.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 221 3467788878888899998 4553 3232111 124678999996 88
Q ss_pred EEEEecCCCcEEEecCCCC
Q 018784 284 SYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 284 ~lasgs~Dg~v~vw~~~~~ 302 (350)
++++=+...+|+.+++...
T Consensus 458 lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEEETTTTEEEEEEECCC
T ss_pred EEEEeCCCCEEEEEECCCC
Confidence 8888888889999987543
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.16 E-value=0.00048 Score=67.80 Aligned_cols=199 Identities=10% Similarity=0.015 Sum_probs=109.6
Q ss_pred cCccC-CeEEEEEC-CCCcEEE-EeeCC----CeEEEeeCCCC-CeeeeeeccccEeEEEEcCCCCeEEEeeCC-----C
Q 018784 58 EGHKG-AVWSCCLD-ANALFSA-SGSAD----FTAKLWDALTG-DEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----K 124 (350)
Q Consensus 58 ~gH~~-~V~~v~~~-~~~~~l~-s~s~D----g~v~vWd~~~~-~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d-----~ 124 (350)
++|.- .+...+|+ |||+++| +.+.+ ..|+++|+.++ +.+.. .-......+.|+||++.|+-...| .
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 34543 67788999 9998766 33333 35999999888 52211 011223568899999877766654 3
Q ss_pred eEEEEECCCCCCCCeee--cCCCCcEEEEEEeCCCCcEEEEEeC--CCeEEEEECCCCc-ee--EeecC--CCCeEEEEE
Q 018784 125 ILRIFDLNRPDAPPREV--GNSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGK-IV--QTLET--KSPVTSAEV 195 (350)
Q Consensus 125 ~v~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~~~--dg~i~iwd~~~~~-~~--~~~~~--~~~v~~~~~ 195 (350)
.|.++++.++....... .........+.|++++..++++... ...|.++|+.++. .. ..+.. .....+..|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 57778886543221121 1223345677888877766665543 3468888988752 22 33322 234445554
Q ss_pred ecCCcEEEEEc-C--C--cEEEEECCCcceeee--eecCCCCceeEecCCCCcEEEEecCCCe--EEEEEc
Q 018784 196 SRDGRYITTAD-G--S--SVKFWDANHFGLVKG--YNMPCNTESASLEPKLGNIFIAGGEDMW--VHVFDF 257 (350)
Q Consensus 196 ~~~~~~l~~~~-~--~--~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~sg~~d~~--i~v~d~ 257 (350)
...+.++..++ + + .|..+|+.+....+. +..........+....+.++++...++. |+++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 44555555543 2 2 566677754211111 1111111112233334566777777775 555664
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.07 E-value=0.0016 Score=57.21 Aligned_cols=200 Identities=15% Similarity=0.244 Sum_probs=122.2
Q ss_pred EEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCC----Cc----EEEEeeC--CCeEEEeeC
Q 018784 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN----AL----FSASGSA--DFTAKLWDA 90 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~----~~----~l~s~s~--Dg~v~vWd~ 90 (350)
+++.+|..|...+++.....+-+.+||+ +|+.+..+.. +.++.|.+-+. ++ .++|--. +.+|+++++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 6677787777666776677788999999 8999888864 55666665442 22 2444444 689999965
Q ss_pred --CCCCeeeeeec---c-----ccEeEEEE--cCC-CC-eEEEeeCCCeEEEEECCC---CCCCCe--eecCCCCcEEEE
Q 018784 91 --LTGDEKHSFEH---K-----HIVRACAF--SED-TH-LLLTGGFEKILRIFDLNR---PDAPPR--EVGNSSGSIRTV 151 (350)
Q Consensus 91 --~~~~~~~~~~h---~-----~~V~~~~~--~~~-~~-~l~sg~~d~~v~vwd~~~---~~~~~~--~~~~~~~~v~~~ 151 (350)
.++. +..+.. + ..++.+++ +|. ++ ++++...++.+..|++.. +....+ ......+.+..|
T Consensus 107 Dp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egc 185 (355)
T 3amr_A 107 DGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGM 185 (355)
T ss_dssp CTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEE
T ss_pred CCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceE
Confidence 4443 333311 1 45667777 674 43 577888889999998842 111111 111234467777
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEECC-----CCceeEeecCC---CCeEEEEEe--cCCc-EEEEEc--CCcEEEEECC-C
Q 018784 152 AWLHSDQTILSSCTDSGGVRLWDAR-----SGKIVQTLETK---SPVTSAEVS--RDGR-YITTAD--GSSVKFWDAN-H 217 (350)
Q Consensus 152 ~~~~~~~~~~~s~~~dg~i~iwd~~-----~~~~~~~~~~~---~~v~~~~~~--~~~~-~l~~~~--~~~i~vwd~~-~ 217 (350)
...+..+. +..+-++..|..+|.+ +++.+..+... ..+..+.+. ++++ +|++++ +....+||.. +
T Consensus 186 vvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 186 AADDEYGR-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEETTTTE-EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEcCCCCe-EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 76654454 4455677667667754 34455554332 467778774 4444 454443 4689999986 4
Q ss_pred cceeeeee
Q 018784 218 FGLVKGYN 225 (350)
Q Consensus 218 ~~~~~~~~ 225 (350)
.+.+..+.
T Consensus 265 ~~~vg~f~ 272 (355)
T 3amr_A 265 NKYVADFR 272 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 55554443
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.01 E-value=0.014 Score=57.44 Aligned_cols=230 Identities=10% Similarity=-0.011 Sum_probs=138.0
Q ss_pred EECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCC---CCCeeecC
Q 018784 68 CLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPD---APPREVGN 143 (350)
Q Consensus 68 ~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~---~~~~~~~~ 143 (350)
++.....++++ ....|+..++........+.....+..++|.+... ++++-...+.|+.+++.... ........
T Consensus 391 ~~~~~p~Ll~a--n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 391 AVGSIAYLFFT--NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp ETTSCCEEEEE--CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred ecccccccccc--cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 33333344443 34567877876655444444556688999998554 44555567889999886421 11122222
Q ss_pred CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEeec-CCCCeEEEEEecCC-cEEEEEcC--CcEEEEECCCcc
Q 018784 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDG-RYITTADG--SSVKFWDANHFG 219 (350)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~--~~i~vwd~~~~~ 219 (350)
.......+++...++.++++-...+.|.+.++........+. .-.....|++.|.+ .++.+..+ ..|...++....
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 334456777766677888888888899999987554333332 23457889999864 44444422 568888876543
Q ss_pred eeeeeecC-CCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecC--CCcCEEEEEEcCCCCEEEEecCCCcEEE
Q 018784 220 LVKGYNMP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKG--HHGPVHCVRFSPGGESYASGSEDGTIRI 296 (350)
Q Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~--h~~~v~~l~~sp~~~~lasgs~Dg~v~v 296 (350)
........ ..+..+.+.+..+.++++-...+.|..+++........+.. .-.....|++.. +.++++-...+.|..
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEE
Confidence 32222111 23455667766778888878888999999865433333322 223456777743 356667667777777
Q ss_pred ecCC
Q 018784 297 WQTN 300 (350)
Q Consensus 297 w~~~ 300 (350)
.+..
T Consensus 628 ~dk~ 631 (791)
T 3m0c_C 628 ANRL 631 (791)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7643
No 286
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.00 E-value=0.002 Score=56.55 Aligned_cols=192 Identities=8% Similarity=0.116 Sum_probs=112.4
Q ss_pred CcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCC----CC---eEEEee-C--CCeEEEEECCCCCCCCeeec
Q 018784 73 ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSED----TH---LLLTGG-F--EKILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 73 ~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~----~~---~l~sg~-~--d~~v~vwd~~~~~~~~~~~~ 142 (350)
..++++....+-+.++|+ .++.+..+.. +.++.+.+-|. ++ ++++.. . +++|++|++...........
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 345566667789999999 7887777653 44566655552 22 233333 3 58999997742222222221
Q ss_pred C-------CCCcEEEEEE--eCCCC-cEEEEEeCCCeEEEEECC-------CCceeEeecCCCCeEEEEEecCCcE-EEE
Q 018784 143 N-------SSGSIRTVAW--LHSDQ-TILSSCTDSGGVRLWDAR-------SGKIVQTLETKSPVTSAEVSRDGRY-ITT 204 (350)
Q Consensus 143 ~-------~~~~v~~~~~--~~~~~-~~~~s~~~dg~i~iwd~~-------~~~~~~~~~~~~~v~~~~~~~~~~~-l~~ 204 (350)
. ....+..++. .+..+ .+++....+|.+..|++. +.+.++++...+.+..+.+.+.... +++
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence 1 1134555555 34344 356666777999999882 3467788888888888999876544 455
Q ss_pred EcCCcEEEEECC-----CcceeeeeecC---CCCceeEecC-CCCc-EEEEec-CCCeEEEEEcc-cCeeEEee
Q 018784 205 ADGSSVKFWDAN-----HFGLVKGYNMP---CNTESASLEP-KLGN-IFIAGG-EDMWVHVFDFH-TGEQIGCN 266 (350)
Q Consensus 205 ~~~~~i~vwd~~-----~~~~~~~~~~~---~~~~~~~~~~-~~~~-~l~sg~-~d~~i~v~d~~-~~~~~~~~ 266 (350)
-.+..|..+|.+ +...+...... .....+.+.+ .+++ +|++.+ .++.+.+||.. +.+.+..+
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 556567777754 23344333222 1233344432 2233 555555 56799999996 55555544
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.99 E-value=0.0069 Score=52.90 Aligned_cols=205 Identities=7% Similarity=-0.087 Sum_probs=124.4
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCcee-eeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI-GTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~-~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
...+++|++ .++.+..+-...+.|..++...+... ..+...-.....+++++ .+.+.++-...+.|.+.++.....
T Consensus 36 ~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 355777775 24566667667777888887655321 11221123345678875 556666766778999999865433
Q ss_pred eeee-eccccEeEEEEcCCCCeEEEee--CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 96 KHSF-EHKHIVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 96 ~~~~-~h~~~V~~~~~~~~~~~l~sg~--~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
...+ ..-.....+++.|.+..|+... ..+.|...+++.. .........-.....+++.+.++.++.+-+..+.|..
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3222 2334578999998765555544 3578888887632 2222222233457789998878888888777889999
Q ss_pred EECCCCceeEeec-CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeee
Q 018784 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~ 225 (350)
+|+........+. .......+++..+..|.+-...+.|..+|..+++....+.
T Consensus 193 ~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 193 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 9986433222222 2234556777654334443345678888887665544433
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.96 E-value=0.0061 Score=51.28 Aligned_cols=192 Identities=13% Similarity=0.112 Sum_probs=118.1
Q ss_pred ccEeEEEEcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce-
Q 018784 103 HIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI- 180 (350)
Q Consensus 103 ~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~- 180 (350)
+.+..++|.|++..|+ +...++.|...|+. +................+++.. ++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCee
Confidence 4589999999876555 46667888888876 3322222122234567778764 456767766778899988755432
Q ss_pred --eEeec-------CCCCeEEEEEecCCc-EEEEEcCC--cEEEEECC-Ccceeeeee--------cCCCCceeEecCCC
Q 018784 181 --VQTLE-------TKSPVTSAEVSRDGR-YITTADGS--SVKFWDAN-HFGLVKGYN--------MPCNTESASLEPKL 239 (350)
Q Consensus 181 --~~~~~-------~~~~v~~~~~~~~~~-~l~~~~~~--~i~vwd~~-~~~~~~~~~--------~~~~~~~~~~~~~~ 239 (350)
+.... .+.....++++|.+. ++++.... .|..|+.. ....+.... .-.....+.+.|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 22221 234568999999874 44444433 34445411 100111110 01234567788888
Q ss_pred CcEEEEecCCCeEEEEEcccCeeEEee--c-CC------CcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 240 GNIFIAGGEDMWVHVFDFHTGEQIGCN--K-GH------HGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 240 ~~~l~sg~~d~~i~v~d~~~~~~~~~~--~-~h------~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
+++++.....+.+..+|.. |+.+..+ . +. -.....|+|.|+|+++++ |+...++.+.
T Consensus 185 g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 8999999999999999976 4454433 2 22 125789999999986665 7777777664
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.91 E-value=0.018 Score=55.28 Aligned_cols=221 Identities=8% Similarity=-0.114 Sum_probs=136.7
Q ss_pred CCCCeeEeeCCCCceeeecc-CccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCeeeeeec-cccEeEEEEcCCCC
Q 018784 39 KDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAFSEDTH 115 (350)
Q Consensus 39 ~d~~v~iw~~~~~~~~~~l~-gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h-~~~V~~~~~~~~~~ 115 (350)
....|+..++++......+. ..-.....++|++. +.++.+-..++.|+.+++........+.. -..+..+++.+.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 44678888887654433222 12345678999875 55566766789999998865443333322 23577888887655
Q ss_pred eE-EEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEe-CCCeEEEEECCCCceeEeecCCCCeEEE
Q 018784 116 LL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLETKSPVTSA 193 (350)
Q Consensus 116 ~l-~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 193 (350)
.| ++-...+.|.+.++.... ........-.....++..|..+.++.+-. ..+.|...++...........-...+.+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceE
Confidence 44 555567889999986432 22222234456788988877777777652 2467888887654433333344567889
Q ss_pred EEecCCcEEEEE--cCCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCee
Q 018784 194 EVSRDGRYITTA--DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (350)
Q Consensus 194 ~~~~~~~~l~~~--~~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~ 262 (350)
++++++..|..+ ..+.|..+|+..............+..+.+. .+.++++-...+.|...|..+|+.
T Consensus 172 alD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~--~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY--QDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEE--CCEEEEecCCCCEEEEEECCCCCc
Confidence 999976555443 3467899998653321111111223344444 367888887888999999776653
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.91 E-value=0.0098 Score=52.09 Aligned_cols=229 Identities=7% Similarity=-0.045 Sum_probs=118.6
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEee--CCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeE-EEeeCCC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA-KLWDALT 92 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~--~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v-~vWd~~~ 92 (350)
..++..|.|.+ +..++.| .++.+..-. .++.+.+.....+.+.+..+.+.+++.+++.+. +|.| +-+|-..
T Consensus 79 ~~~~~~i~~~~----~~~~~~g-~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG----NEGWIVG-EPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGK 152 (327)
T ss_dssp CCEEEEEEEET----TEEEEEE-ETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTS
T ss_pred CccEEEEEecC----CeEEEEE-CCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCC
Confidence 34678888864 4455544 445443311 122222222223445677777766777766654 5543 4445211
Q ss_pred CCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 93 ~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
.=..........+..+++.|++.+++.+...+..+.+|-. +..-..........+..+.+.+++ .+++. +.+|.+++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g-~~~~~-~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDG-RLWMI-VNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTS-CEEEE-ETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCC-CEEEE-eCCceEEE
Confidence 1011112344568899999998888777665555555531 111111112234567778776544 44443 45688877
Q ss_pred EECCCCceeEeecC-----CCCeEEEEEecCCcEEEEEcCCcEEEEECCC---cceeeee-ecCCCCceeEecCCCCcEE
Q 018784 173 WDARSGKIVQTLET-----KSPVTSAEVSRDGRYITTADGSSVKFWDANH---FGLVKGY-NMPCNTESASLEPKLGNIF 243 (350)
Q Consensus 173 wd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~l 243 (350)
.+...++....+.. ...+..+.+.+++.+++++.++.+. +.... ...+... ..+.....+.+.. +..+
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~--~~~~ 306 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFS--PDQG 306 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEE--TTEE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEEC--CCce
Confidence 75333443333321 2357888888888888887777663 33222 2222110 1122233344432 3445
Q ss_pred EEecCCCeEEEEE
Q 018784 244 IAGGEDMWVHVFD 256 (350)
Q Consensus 244 ~sg~~d~~i~v~d 256 (350)
++++.+|.|.-++
T Consensus 307 ~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 307 FILGQKGILLRYV 319 (327)
T ss_dssp EEECSTTEEEEEC
T ss_pred EEEcCCceEEEEc
Confidence 6666778766554
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.0011 Score=60.74 Aligned_cols=153 Identities=15% Similarity=0.118 Sum_probs=98.1
Q ss_pred cEEEEEEeC-CCCcEEEEEeCCCeEEEEECCCCceeEeecCCCCeEEEEEecCCcEE-EEEcC-C----cEEEEECCCcc
Q 018784 147 SIRTVAWLH-SDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTADG-S----SVKFWDANHFG 219 (350)
Q Consensus 147 ~v~~~~~~~-~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~-~----~i~vwd~~~~~ 219 (350)
....+++.+ .++.++++-.. +.|+.+|+..++.............+++++++++| ++... + .+.+++. ...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 345677776 35556655444 78999999877655544545567889999999854 44331 1 2333443 222
Q ss_pred ee--eeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEee-cCCCcCEEEEEEcCCCC-EEEEecCCCcEE
Q 018784 220 LV--KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCN-KGHHGPVHCVRFSPGGE-SYASGSEDGTIR 295 (350)
Q Consensus 220 ~~--~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~-~~h~~~v~~l~~sp~~~-~lasgs~Dg~v~ 295 (350)
.. ..+.....+..+.+.+..+.++++-..++.|+.|+...+...... .+.......|+|+|+++ ++++-...+.|.
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 21 122212334556677656888888888899999998876542222 12224578999999999 566777888999
Q ss_pred EecCCC
Q 018784 296 IWQTNP 301 (350)
Q Consensus 296 vw~~~~ 301 (350)
.++.+.
T Consensus 296 ~~~~d~ 301 (430)
T 3tc9_A 296 RSDYDW 301 (430)
T ss_dssp EEEEET
T ss_pred EEeCCc
Confidence 988653
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.86 E-value=0.0029 Score=54.51 Aligned_cols=225 Identities=12% Similarity=0.093 Sum_probs=111.0
Q ss_pred CccEEEEEe-CC-----CCeeEeeCCCCceeee--ccCccCCeEEEEECCCCcEEEEeeCC-----CeEEEeeCCCCC--
Q 018784 30 DGFFLVSAS-KD-----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTGD-- 94 (350)
Q Consensus 30 dg~~lasgs-~d-----~~v~iw~~~~~~~~~~--l~gH~~~V~~v~~~~~~~~l~s~s~D-----g~v~vWd~~~~~-- 94 (350)
++.+++.|+ .+ ..+.++|..+.++... +......-.++. .++.+++.||.+ ..+.++|..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 456666676 33 3577889888776532 221111111222 356677777765 468888987765
Q ss_pred -eeee--eeccccEeEEEEcCCCCeEEEeeCC-----CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 95 -EKHS--FEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 95 -~~~~--~~h~~~V~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
-... +.....-.++.. .++++++.|+.+ ..+.+||+.+.+............-.+++.. ++.+++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCC
Confidence 2221 111111112222 256677777654 3578888765432111101111011112222 4556666654
Q ss_pred C-----CeEEEEECCCCceeEe--ecCCCCeEEEEEecCCcEEEEE-c-----CCcEEEEECCCcceeeeeecCCCCcee
Q 018784 167 S-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYITTA-D-----GSSVKFWDANHFGLVKGYNMPCNTESA 233 (350)
Q Consensus 167 d-----g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~-----~~~i~vwd~~~~~~~~~~~~~~~~~~~ 233 (350)
+ ..+.++|+.+.+-... +.....-.++.. -++++++.+ . -..+.+||+.+..-...-.++......
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccce
Confidence 3 4688999887642221 111111112222 245555543 2 246899999876543332333222221
Q ss_pred EecCCCCcEEEEecCC-----CeEEEEEcccC
Q 018784 234 SLEPKLGNIFIAGGED-----MWVHVFDFHTG 260 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d-----~~i~v~d~~~~ 260 (350)
.....++++++.|+.+ ..+.+||+.+.
T Consensus 248 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred eEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 2222246788888865 35778887654
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.86 E-value=0.012 Score=51.52 Aligned_cols=267 Identities=11% Similarity=0.063 Sum_probs=137.4
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCC-ceeee-c--cCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-DWIGT-F--EGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~-~~~~~-l--~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~ 91 (350)
...+.+|.|.+ ++..++.| .++.+. +....| .+... + ......+..+.+.+ +..++. +.++.|..-. .
T Consensus 35 ~~~~~~v~~~~---~~~~~~~G-~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~~S~-D 106 (327)
T 2xbg_A 35 TATILDMSFID---RHHGWLVG-VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEPPIMLHTT-D 106 (327)
T ss_dssp SSCEEEEEESS---SSCEEEEE-TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EETTEEEEES-S
T ss_pred CCcEEEEEECC---CCcEEEEc-CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECCCeEEEEC-C
Confidence 45788998864 56666754 556542 222222 22221 1 12344678888876 444443 5566554421 1
Q ss_pred CCCeeeee----eccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC
Q 018784 92 TGDEKHSF----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (350)
Q Consensus 92 ~~~~~~~~----~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d 167 (350)
.++.-... .++..+..+.+.+++..++++...+..+..|- +..-..........+..+++.++ +.+++.+...
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~Dg--G~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g~~G 183 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDS--GKNWQALVQEAIGVMRNLNRSPS-GEYVAVSSRG 183 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESST--TSSEEEEECSCCCCEEEEEECTT-SCEEEEETTS
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCC--CCCCEEeecCCCcceEEEEEcCC-CcEEEEECCC
Confidence 22221111 12345777887777776665543333344332 11111122233456778887764 5566555443
Q ss_pred CeEEEEEC--CCCceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeecC---CC--CceeEecCCCC
Q 018784 168 GGVRLWDA--RSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP---CN--TESASLEPKLG 240 (350)
Q Consensus 168 g~i~iwd~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~~---~~--~~~~~~~~~~~ 240 (350)
+..+-+|- .+-+.+. ......+..+.+.+++++++.+.++.+++.+...+..-.....+ .. ...+.+.+ .+
T Consensus 184 ~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~ 261 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PN 261 (327)
T ss_dssp SEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SS
T ss_pred cEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CC
Confidence 33444442 2222321 22345678888999999888888888777642212221112211 11 12233333 35
Q ss_pred cEEEEecCCCeEEEEEcccCeeEEeec---CCCcCEEEEEEcCCCCEEEEecCCCcEEEec
Q 018784 241 NIFIAGGEDMWVHVFDFHTGEQIGCNK---GHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (350)
Q Consensus 241 ~~l~sg~~d~~i~v~d~~~~~~~~~~~---~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~ 298 (350)
.+++++. ++.| ++..+.|+.-..+. .+...++++.|.+++. ++.++.+|.|.-++
T Consensus 262 ~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 262 EVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 6666655 5655 34444454433332 2345678899976555 55667788877765
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.81 E-value=0.00051 Score=66.96 Aligned_cols=204 Identities=13% Similarity=-0.059 Sum_probs=116.0
Q ss_pred eeEEEecccCCCccEEEEEeCCCCeeEeeCCC----CceeeeccCccCCeEEEEECC-CCcEEEEeeCCCeEEEeeCCCC
Q 018784 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTG 93 (350)
Q Consensus 19 v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~----~~~~~~l~gH~~~V~~v~~~~-~~~~l~s~s~Dg~v~vWd~~~~ 93 (350)
+.+++|++ .++.+..+-...+.|+.+++.. ......+.........+++.+ .+.++++-...+.|.+.++...
T Consensus 408 p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 408 VVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred eEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 44666664 1344555555667788877654 222222221112234567774 4556666566789999998655
Q ss_pred Ceeeeeec-cccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeE
Q 018784 94 DEKHSFEH-KHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (350)
Q Consensus 94 ~~~~~~~h-~~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i 170 (350)
.....+.. -.....+++.|.+.+|+.... .+.|.++++.... ........-.....+++.+.+++++++-+..+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 43333322 244678899996655554432 2678777775322 2222222233456788887778888887778899
Q ss_pred EEEECCCCceeEeecC---CCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeee
Q 018784 171 RLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 171 ~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~ 225 (350)
..+|+........+.. ......+++..+..|++....+.|..+|..+++.+..+.
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 9999864333222221 122334556555333333345789999987776655543
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.78 E-value=0.03 Score=53.68 Aligned_cols=224 Identities=7% Similarity=-0.080 Sum_probs=137.6
Q ss_pred CcEEEEeeCCCeEEEeeCCCCCeeeeee--ccccEeEEEEcCCCCeEE-EeeCCCeEEEEECCCCCCCCeeecCCCCcEE
Q 018784 73 ALFSASGSADFTAKLWDALTGDEKHSFE--HKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIR 149 (350)
Q Consensus 73 ~~~l~s~s~Dg~v~vWd~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~-sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~ 149 (350)
.-++++ ....|+.-++.+......+. .-..+..++|++.+..|+ +-..++.|..+++..... ............
T Consensus 7 ~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~ 83 (628)
T 4a0p_A 7 AFLLFS--RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPE 83 (628)
T ss_dssp CEEEEE--ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCC
T ss_pred cEEEEE--eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcc
Confidence 334443 56788888887654333332 334678999998665555 555678899998864322 222222223456
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEee-cCCCCeEEEEEec-CCcEEEEEc--CCcEEEEECCCcceeeeee
Q 018784 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSR-DGRYITTAD--GSSVKFWDANHFGLVKGYN 225 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~--~~~i~vwd~~~~~~~~~~~ 225 (350)
.+++...++.++.+-...+.|.+.++........+ ..-.....+++.| +|.++.+.. ...|...++..........
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC
Confidence 67776667778887777789999998654332222 2334568899998 455555542 3567777775433221112
Q ss_pred cCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 226 MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.-..+..+.+.+..+.++++-...+.|..+|+..... ..+.........|++.. +.++++-...+.|...|...
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 1123445667766678888888888999999865433 22322333456787765 55666766678888877543
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.74 E-value=0.00069 Score=66.00 Aligned_cols=218 Identities=9% Similarity=-0.030 Sum_probs=124.4
Q ss_pred CCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEe-eCCCeEEEEECCCC---CCCCeeecCCCCcEEEEEEeCCC
Q 018784 82 DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKILRIFDLNRP---DAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 82 Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
...|++.++.+......+.....+..++|.+.+..|+.. ...+.|+.+++... ................+++...+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 457777787665544444444457788999876666554 45678999998641 11111111111223455655456
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEeecC-CCCeEEEEEecCCcE-EEEEc--CCcEEEEECCCcceeeeeec-CCCCce
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRY-ITTAD--GSSVKFWDANHFGLVKGYNM-PCNTES 232 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~-l~~~~--~~~i~vwd~~~~~~~~~~~~-~~~~~~ 232 (350)
+.++++-...+.|.+.++........+.. ......++++|.+.+ +.+.. .+.|..+++........... -..+..
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 66777666678899999875543333332 234567888886543 33332 25677777643221111111 122445
Q ss_pred eEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec--CCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 233 ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 233 ~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
+.+.+..+.++++-+..+.|..+++........+. ........|++..+ .++++-...+.|..++..
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 67777667888888888999999986433222222 11223345566444 566676777888888753
No 297
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.67 E-value=0.0048 Score=53.20 Aligned_cols=225 Identities=14% Similarity=0.162 Sum_probs=106.9
Q ss_pred CccEEEEEeCC----CCeeEeeCCCCceeee--ccCccCCeEEEEECCCCcEEEEeeCCC-----eEEEeeCCCCCeeee
Q 018784 30 DGFFLVSASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSADF-----TAKLWDALTGDEKHS 98 (350)
Q Consensus 30 dg~~lasgs~d----~~v~iw~~~~~~~~~~--l~gH~~~V~~v~~~~~~~~l~s~s~Dg-----~v~vWd~~~~~~~~~ 98 (350)
++.+++.|+.+ ..+.++|..+.++... +......-.++.+ ++.+++.||.++ .+.++|..+.+-...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 34566666643 3467888887776432 2211111112222 566777777553 577888766542211
Q ss_pred --eeccccEeEEEEcCCCCeEEEeeCCC-----eEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC----
Q 018784 99 --FEHKHIVRACAFSEDTHLLLTGGFEK-----ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS---- 167 (350)
Q Consensus 99 --~~h~~~V~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d---- 167 (350)
+.....-.+++. .++.+++.|+.++ .+.+||+.+..............-.+++.. ++.+++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASR 169 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTT
T ss_pred CCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCC
Confidence 111111112222 2566777777553 477888764321110000000001112222 45566555432
Q ss_pred ---CeEEEEECCCCceeE--eecCCCCeEEEEEecCCcEEEEE-cC-----CcEEEEECCCcceeeeeecCCCCceeEec
Q 018784 168 ---GGVRLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYITTA-DG-----SSVKFWDANHFGLVKGYNMPCNTESASLE 236 (350)
Q Consensus 168 ---g~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~-~~-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
..+.+||+.+.+=.. .+.....-.++... ++++++.+ .+ ..+.+||+.+..-.....++.........
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 358899988764222 12211111222222 45555543 22 36889998875543322222222211122
Q ss_pred CCCCcEEEEecCCC-----eEEEEEcccC
Q 018784 237 PKLGNIFIAGGEDM-----WVHVFDFHTG 260 (350)
Q Consensus 237 ~~~~~~l~sg~~d~-----~i~v~d~~~~ 260 (350)
...+.+++.|+.++ .+.+||+.+.
T Consensus 249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 249 AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 22467888888653 4777877654
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.64 E-value=0.033 Score=53.35 Aligned_cols=221 Identities=10% Similarity=0.003 Sum_probs=126.2
Q ss_pred CCCeEEEeeCCCCC--eeeeeeccccEeEEEEcCCCCeEEEe-eCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCC
Q 018784 81 ADFTAKLWDALTGD--EKHSFEHKHIVRACAFSEDTHLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (350)
Q Consensus 81 ~Dg~v~vWd~~~~~--~~~~~~h~~~V~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (350)
....|++-++.... .......-..+..++|++.+..|+-+ ...+.|..+++...................+++...+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 35677887776542 22222334557899999866666544 4467888888864322122222233567888887767
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEee-cCCCCeEEEEEecC-CcEEEEEc--CCcEEEEECCCcceeeeee-cCCCCce
Q 018784 158 QTILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRD-GRYITTAD--GSSVKFWDANHFGLVKGYN-MPCNTES 232 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~--~~~i~vwd~~~~~~~~~~~-~~~~~~~ 232 (350)
+.++++-...+.|.+.++........+ ..-.....+++.|. |.++.+.. ...|...++.......... .-..+..
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 888888888899999998754332222 22334567889986 55555543 3466666665322211111 1123445
Q ss_pred eEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCC
Q 018784 233 ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPP 302 (350)
Q Consensus 233 ~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~ 302 (350)
+.+.+..++++++-...+.|..+|+..........+.......|++.++ .++++-...+.|...|....
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 6677666788888888888999998654332222212222356677655 56666666778888776443
No 299
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.0094 Score=51.44 Aligned_cols=224 Identities=8% Similarity=0.048 Sum_probs=109.1
Q ss_pred ccEEEEEeC--CCCeeEeeCCCCceeee--ccCccCCeEEEEECCCCcEEEEeeCC----CeEEEeeCCCCCeeee--ee
Q 018784 31 GFFLVSASK--DSSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALTGDEKHS--FE 100 (350)
Q Consensus 31 g~~lasgs~--d~~v~iw~~~~~~~~~~--l~gH~~~V~~v~~~~~~~~l~s~s~D----g~v~vWd~~~~~~~~~--~~ 100 (350)
+.+++.|+. ...+.+||..+.++... +......-.++. .++.+++-||.+ ..+.++|+.+..-... +.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345566654 35678899888777532 211111111222 356677777755 6678888876642221 11
Q ss_pred ccccEeEEEEcCCCCeEEEeeCC------CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeC--------
Q 018784 101 HKHIVRACAFSEDTHLLLTGGFE------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-------- 166 (350)
Q Consensus 101 h~~~V~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~-------- 166 (350)
....-.++. ..++++++.|+.+ ..+.+||+.+..............-.+++.. ++.+++.|+.
T Consensus 90 ~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 90 TPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCE
T ss_pred ccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCccc
Confidence 111111111 2256677777765 4588888765321110000000001111222 4456555542
Q ss_pred -CCeEEEEECCCCceeE--eecCCCCeEEEEEecCCcEEEEEc------CCcEEEEECCCcceeeeeecCCCCceeEecC
Q 018784 167 -SGGVRLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYITTAD------GSSVKFWDANHFGLVKGYNMPCNTESASLEP 237 (350)
Q Consensus 167 -dg~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
-..+.+||+.+.+=.. .+.....-..+... ++++++.+. -..+.+||+.+..-...-.++..........
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 2458899998764221 11111111122222 555555432 1468899987754333222332222112122
Q ss_pred CCCcEEEEecCC-----CeEEEEEcccC
Q 018784 238 KLGNIFIAGGED-----MWVHVFDFHTG 260 (350)
Q Consensus 238 ~~~~~l~sg~~d-----~~i~v~d~~~~ 260 (350)
..+.+++.|+.+ ..+.+||+.+.
T Consensus 246 ~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 246 VGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred ECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 246788888854 46788887654
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.61 E-value=0.086 Score=54.21 Aligned_cols=280 Identities=12% Similarity=0.053 Sum_probs=150.2
Q ss_pred CCceeEEEecccCC---CccEEEEEeC-CCCeeEeeCCCCceeee--ccCccCCeEEEEEC--CCCcEEEEeeCCCeEEE
Q 018784 16 SRPVVDLFYSPITP---DGFFLVSASK-DSSPMLRNGETGDWIGT--FEGHKGAVWSCCLD--ANALFSASGSADFTAKL 87 (350)
Q Consensus 16 ~~~v~~~~~~~~s~---dg~~lasgs~-d~~v~iw~~~~~~~~~~--l~gH~~~V~~v~~~--~~~~~l~s~s~Dg~v~v 87 (350)
...|.|+++.|... .+.++|.|.+ |++++|+++.+.+.+.. +.+. ....++++. ....+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 45789998876432 2579999997 99999999987666542 3221 122333321 23467788889999765
Q ss_pred eeC--CCCCeee---eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEE-EEEeCCC-CcE
Q 018784 88 WDA--LTGDEKH---SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRT-VAWLHSD-QTI 160 (350)
Q Consensus 88 Wd~--~~~~~~~---~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~-~~~ 160 (350)
+.+ .++.... .+-...++.-..|...+..-+-+..++...++--. +. .....-.-..+.. ..|.... ..-
T Consensus 632 ~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~--l~~s~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HK--LVFSNVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SS--EEEEEBSSSCCCEEEEECCSSSTTE
T ss_pred EEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cc--eEEeccChHHhceEeccCcccCCCc
Confidence 543 3443221 11123344444444433322223334454555322 11 1111111112222 3333221 122
Q ss_pred EEEEeCCCeEEEEECCCCc--eeEeecCCCCeEEEEEecCCcEEEE--Ec------------------------------
Q 018784 161 LSSCTDSGGVRLWDARSGK--IVQTLETKSPVTSAEVSRDGRYITT--AD------------------------------ 206 (350)
Q Consensus 161 ~~s~~~dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~--~~------------------------------ 206 (350)
++.. .+++++|..+..-+ .+..+.....+..++++|+.+.++. +.
T Consensus 709 ~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 709 LALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred EEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 3322 34568888764332 3334444455666666665443221 10
Q ss_pred ------------------CCcEEEEECCCcceeeeeecCCCCceeE-----ecCCCCcEEEEec----------CCCeEE
Q 018784 207 ------------------GSSVKFWDANHFGLVKGYNMPCNTESAS-----LEPKLGNIFIAGG----------EDMWVH 253 (350)
Q Consensus 207 ------------------~~~i~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~sg~----------~d~~i~ 253 (350)
...|++.|..++..+..+.+..+....+ +......++++|+ ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 1247888888888877777765543222 2222347888887 357899
Q ss_pred EEEcccCeeEEee-cCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 254 VFDFHTGEQIGCN-KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 254 v~d~~~~~~~~~~-~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+|++..++..... ....++|++++-- +|.++++-+ ..|++|++...+
T Consensus 868 vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig--~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASIN--STVRLYEWTTEK 915 (1158)
T ss_dssp EEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEET--TEEEEEEECTTS
T ss_pred EEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcC--CEEEEEECCCCc
Confidence 9999755432211 2346789988744 455555443 689999986544
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.0069 Score=56.02 Aligned_cols=154 Identities=13% Similarity=0.122 Sum_probs=98.3
Q ss_pred cEEEEEEeCC-CCcEEEEEeCCCeEEEEECCCCceeEeecCC----CCeEEEEE-------ecCCcEE-EEEcCC-----
Q 018784 147 SIRTVAWLHS-DQTILSSCTDSGGVRLWDARSGKIVQTLETK----SPVTSAEV-------SRDGRYI-TTADGS----- 208 (350)
Q Consensus 147 ~v~~~~~~~~-~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~----~~v~~~~~-------~~~~~~l-~~~~~~----- 208 (350)
....+++.|. ++.++++....+.|++.|+.++.....+... .....++| ++++..| ++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4667888763 5566666555567999999887765544332 24788999 9999844 444332
Q ss_pred --cEEEEECCC-ccee-----eeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcc-------cCee-----------
Q 018784 209 --SVKFWDANH-FGLV-----KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH-------TGEQ----------- 262 (350)
Q Consensus 209 --~i~vwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~-------~~~~----------- 262 (350)
.|.+++... +... +.+..-..+..+.+.+..+.++++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266665333 1111 1111112344556777678889899899999999997 4543
Q ss_pred EEe-e-cCCCcCEEEEEEcCCCC-EEEEecCCCcEEEecCC
Q 018784 263 IGC-N-KGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTN 300 (350)
Q Consensus 263 ~~~-~-~~h~~~v~~l~~sp~~~-~lasgs~Dg~v~vw~~~ 300 (350)
... + .+...+.+.|+|+|+++ ++++=+...+|+.++.+
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 111 1 12334568999999999 46666778899987654
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.58 E-value=0.012 Score=50.62 Aligned_cols=211 Identities=16% Similarity=0.163 Sum_probs=100.7
Q ss_pred CeEEEeeCCCCCeeee--eeccccEeEEEEcCCCCeEEEeeCC-----CeEEEEECCCCCCC-CeeecC--CCCcEEEEE
Q 018784 83 FTAKLWDALTGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAP-PREVGN--SSGSIRTVA 152 (350)
Q Consensus 83 g~v~vWd~~~~~~~~~--~~h~~~V~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~-~~~~~~--~~~~v~~~~ 152 (350)
..+.++|+.+.+-... +.....-.++. ..++.+++.|+.+ ..+.+||+.+.... ...... ....-.+++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 3577778766542111 11111111222 2356677777755 45888998765410 111111 110111122
Q ss_pred EeCCCCcEEEEEeCC-----CeEEEEECCCCce--eEeecCCCCeEEEEEecCCcEEEEE-c-----CCcEEEEECCCcc
Q 018784 153 WLHSDQTILSSCTDS-----GGVRLWDARSGKI--VQTLETKSPVTSAEVSRDGRYITTA-D-----GSSVKFWDANHFG 219 (350)
Q Consensus 153 ~~~~~~~~~~s~~~d-----g~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~-----~~~i~vwd~~~~~ 219 (350)
.. ++.+++.|+.+ ..+.++|+.+.+- +..+.....-.++.. .++++++.+ . -..+.+||+.+..
T Consensus 110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 22 45666666543 3688999877642 222222111112222 256655543 2 2468899987765
Q ss_pred eeeeeecCCCCceeEecCCCCcEEEEecCC-----CeEEEEEcccCee--EEeecCCCcCEEEEEEcCCCCEEEEecCCC
Q 018784 220 LVKGYNMPCNTESASLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ--IGCNKGHHGPVHCVRFSPGGESYASGSEDG 292 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----~~i~v~d~~~~~~--~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg 292 (350)
-...-.++...........++.+++.|+.+ ..+.+||+.+.+= +..+.........+.+ ++++++.|+.++
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCC
Confidence 433222332222222222246888888864 4688999876542 2222111111122222 567777777653
Q ss_pred -----cEEEecC
Q 018784 293 -----TIRIWQT 299 (350)
Q Consensus 293 -----~v~vw~~ 299 (350)
.|.+||.
T Consensus 265 ~~~~~~v~~yd~ 276 (301)
T 2vpj_A 265 NSLLSSIECYDP 276 (301)
T ss_dssp SSBEEEEEEEET
T ss_pred CcccccEEEEcC
Confidence 4555654
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.52 E-value=0.026 Score=49.97 Aligned_cols=218 Identities=10% Similarity=0.097 Sum_probs=112.0
Q ss_pred eEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeee--eee----ccccEeEEEEcCC---CCeEEEeeC-C-----CeEEE
Q 018784 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKH--SFE----HKHIVRACAFSED---THLLLTGGF-E-----KILRI 128 (350)
Q Consensus 64 V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~--~~~----h~~~V~~~~~~~~---~~~l~sg~~-d-----~~v~v 128 (350)
-+.+++.+++.++++ ..+|.|++++ .+.... .+. .......++|+|+ +..|+.+.. . ..|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 468899999997776 4569999998 333211 111 2346789999998 555544433 2 56777
Q ss_pred EECCCCCC-----CCeeec---CCCCcEEEEEEeCCCCcEEEEEeCC-------------CeEEEEECCCC---------
Q 018784 129 FDLNRPDA-----PPREVG---NSSGSIRTVAWLHSDQTILSSCTDS-------------GGVRLWDARSG--------- 178 (350)
Q Consensus 129 wd~~~~~~-----~~~~~~---~~~~~v~~~~~~~~~~~~~~s~~~d-------------g~i~iwd~~~~--------- 178 (350)
|++..... ...... ........++|.++ +.++++-++. ++|.-++....
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 77653211 001011 10112246777664 4566554321 45655655420
Q ss_pred -----ceeEeecCCCCeEEEEEec-CCcEEEEEcCC-c--------EEEEECCC-cc---------------eeeeeecC
Q 018784 179 -----KIVQTLETKSPVTSAEVSR-DGRYITTADGS-S--------VKFWDANH-FG---------------LVKGYNMP 227 (350)
Q Consensus 179 -----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~-~--------i~vwd~~~-~~---------------~~~~~~~~ 227 (350)
..+... .......++|+| ++.++++-.+. . |.+..... +. ++..+...
T Consensus 189 ~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 267 (352)
T 2ism_A 189 RRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG 267 (352)
T ss_dssp CTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC
Confidence 011111 112245678898 67776654322 2 33332211 00 00011000
Q ss_pred CCCceeEecCCCCcEEEEecCCCeEEEEEcccCee------EEeecCCCcCEEEEEEcCCCCEEEEe
Q 018784 228 CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ------IGCNKGHHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~------~~~~~~h~~~v~~l~~sp~~~~lasg 288 (350)
..+..+.+ ..+.++++....+.|...++..... ...+..-...+..+++.|||.++++.
T Consensus 268 ~ap~G~~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 268 FPPGNLAF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CCEEEEEE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCCcceEE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 11112223 2467777777778888888764321 11221223568999999999876654
No 304
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.48 E-value=0.011 Score=51.09 Aligned_cols=224 Identities=14% Similarity=0.159 Sum_probs=107.1
Q ss_pred CccEEEEEeCC----CCeeEeeCCCCceeee--ccCccCCeEEEEECCCCcEEEEeeC----C-----CeEEEeeCCCCC
Q 018784 30 DGFFLVSASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSA----D-----FTAKLWDALTGD 94 (350)
Q Consensus 30 dg~~lasgs~d----~~v~iw~~~~~~~~~~--l~gH~~~V~~v~~~~~~~~l~s~s~----D-----g~v~vWd~~~~~ 94 (350)
++.+++.|+.+ ..+.++|..+.++... +..-...- +++. .++.+++-||. + ..+.++|+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 56677777642 3577899888777542 11111111 1222 25666666665 3 457788876654
Q ss_pred eeee--eeccccEeEEEEcCCCCeEEEeeCC-----CeEEEEECCCCCCCCe-eecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 95 EKHS--FEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPR-EVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 95 ~~~~--~~h~~~V~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
-... +.....-.+++. -++++++.|+.+ ..+.+||+.+.+.... ........- +++.. ++.+++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEEE--CCEEEEEeCC
Confidence 2211 111111111111 256677777643 3577888764321100 000001111 12222 4566666654
Q ss_pred C-----CeEEEEECCCCceeE--eecCCCCeEEEEEecCCcEEEEE-cC-----CcEEEEECCCcceeeeeecCCCCcee
Q 018784 167 S-----GGVRLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYITTA-DG-----SSVKFWDANHFGLVKGYNMPCNTESA 233 (350)
Q Consensus 167 d-----g~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~-~~-----~~i~vwd~~~~~~~~~~~~~~~~~~~ 233 (350)
+ ..+.++|+.+.+=.. .+.....-.++... ++++++.+ .+ ..+.+||+.+..-.....++......
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 3 458899987764221 11111111222223 55555443 22 46899998876543322333222211
Q ss_pred EecCCCCcEEEEecCC-----CeEEEEEcccC
Q 018784 234 SLEPKLGNIFIAGGED-----MWVHVFDFHTG 260 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d-----~~i~v~d~~~~ 260 (350)
......+++++.|+.+ ..+.+||+.+.
T Consensus 257 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 257 GITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EEEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1112246788888754 34667776553
No 305
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.38 E-value=0.026 Score=48.86 Aligned_cols=210 Identities=13% Similarity=0.107 Sum_probs=98.1
Q ss_pred EEEEEeCCCCeeEeeCCCCceee-eccCccCCeEEEEECCCCcEEEEeeC----C-------CeEEEeeCCCCCeeee--
Q 018784 33 FLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA----D-------FTAKLWDALTGDEKHS-- 98 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~----D-------g~v~vWd~~~~~~~~~-- 98 (350)
+++.|+ ..+.+||..+.++.. .+..........+...++.+++.||. + ..+.++|..+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 445555 568899999888753 22222233333334456677666663 1 1266778766542111
Q ss_pred eeccccEeEEEEcCCCCeEEEeeCC--------CeEEEEECCCCCCCCee-ecCCCCcEEEEEEeCCCCcEEEEEeC-C-
Q 018784 99 FEHKHIVRACAFSEDTHLLLTGGFE--------KILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILSSCTD-S- 167 (350)
Q Consensus 99 ~~h~~~V~~~~~~~~~~~l~sg~~d--------~~v~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~-d- 167 (350)
+.....-.+++. -++.+++.|+.+ ..+.+||+.+.+..... ........ +++.. ++.+++.|+. +
T Consensus 85 ~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLSH--MDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEECCBCTT
T ss_pred CCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEEE--CCEEEEEeCCCCC
Confidence 111111111211 256666677642 45788888653211000 00001111 12222 4456666654 2
Q ss_pred ----CeEEEEECCCCce--eEeecCCCCeEEEEEecCCcEEE-EEcC-----CcEEEEECCCcceeeeeecCCCCceeEe
Q 018784 168 ----GGVRLWDARSGKI--VQTLETKSPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFGLVKGYNMPCNTESASL 235 (350)
Q Consensus 168 ----g~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~-~~~~-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 235 (350)
..+.++|+.+.+= +..+.....-..+... ++++++ .+.+ ..+.+||+.+..-...-.++........
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 4689999887642 1111111111222223 455544 4432 2578899877644332223322222222
Q ss_pred cCCCCcEEEEecCC
Q 018784 236 EPKLGNIFIAGGED 249 (350)
Q Consensus 236 ~~~~~~~l~sg~~d 249 (350)
....+++++.|+.+
T Consensus 240 ~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 240 VSLVGTLYAIGGFA 253 (315)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEECCEEEEECCcc
Confidence 22246778877753
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.36 E-value=0.11 Score=49.66 Aligned_cols=157 Identities=6% Similarity=-0.090 Sum_probs=93.4
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc-eeeeccCccCCeEEEEECCC-CcEEEEeeCCCeEEEeeCCCCCe
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDE 95 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~-~~~~l~gH~~~V~~v~~~~~-~~~l~s~s~Dg~v~vWd~~~~~~ 95 (350)
...+++|++ .++.+..+-...+.|..++..... ....+..-......++++.. +.+.++-...+.|.+.++.....
T Consensus 41 ~~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 456788876 245555555556677777765432 12233332345678899874 55666667779999999865443
Q ss_pred eeee-eccccEeEEEEcCCCCeEEEeeC--CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEE
Q 018784 96 KHSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (350)
Q Consensus 96 ~~~~-~h~~~V~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~i 172 (350)
...+ ..-...+.+++.|.+..|+-... ...|...+++. ..........-.....+++.+.+++++++-...+.|..
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 3333 23345789999997555544433 45677777653 22222222234456778877767777776666677777
Q ss_pred EECCC
Q 018784 173 WDARS 177 (350)
Q Consensus 173 wd~~~ 177 (350)
.|+..
T Consensus 198 ~~~dG 202 (619)
T 3s94_A 198 SNLDG 202 (619)
T ss_dssp ESSSC
T ss_pred ecCCC
Confidence 77754
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.36 E-value=0.027 Score=48.35 Aligned_cols=184 Identities=17% Similarity=0.198 Sum_probs=88.9
Q ss_pred CCCeEEEeeCC-----CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCC-----CeEEEEECCCCceeE
Q 018784 113 DTHLLLTGGFE-----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARSGKIVQ 182 (350)
Q Consensus 113 ~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~iwd~~~~~~~~ 182 (350)
++.+++.|+.+ ..+.+||+.+.+............-.+++.. ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56677777754 3578888764321110000000001112222 45566656544 257888987764222
Q ss_pred e--ecCCCCeEEEEEecCCcEEEEE-c-------CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCC---
Q 018784 183 T--LETKSPVTSAEVSRDGRYITTA-D-------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED--- 249 (350)
Q Consensus 183 ~--~~~~~~v~~~~~~~~~~~l~~~-~-------~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--- 249 (350)
. +.....-.+++. -++++++.+ . -..+.+||+.+..-...-.++............+.+++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred cCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc
Confidence 1 111111112222 345555443 1 2358889987755433222332222222222247888898865
Q ss_pred --CeEEEEEcccCe--eEEeecCCCcCEEEEEEcCCCCEEEEecCCC-----cEEEecCCC
Q 018784 250 --MWVHVFDFHTGE--QIGCNKGHHGPVHCVRFSPGGESYASGSEDG-----TIRIWQTNP 301 (350)
Q Consensus 250 --~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg-----~v~vw~~~~ 301 (350)
..+.+||+.+.+ .+..+...... .++.. -++.+++.|+.++ .|.+||...
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRN-AGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred ccceEEEEeCCCCCEeeCCCCCCcccc-CeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 368899987653 22222111111 11222 2667788888654 377777643
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.22 E-value=0.039 Score=47.47 Aligned_cols=222 Identities=14% Similarity=0.094 Sum_probs=105.8
Q ss_pred cEEEEeeC--CCeEEEeeCCCCCeeee--eeccccEeEEEEcCCCCeEEEeeCC----CeEEEEECCCCCCCCeeecCCC
Q 018784 74 LFSASGSA--DFTAKLWDALTGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSS 145 (350)
Q Consensus 74 ~~l~s~s~--Dg~v~vWd~~~~~~~~~--~~h~~~V~~~~~~~~~~~l~sg~~d----~~v~vwd~~~~~~~~~~~~~~~ 145 (350)
.+++-||. ...+.++|..+.+-... +.....-.++. ..++.+++.|+.+ ..+.+||+.+............
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 34444444 35677888766542211 11111111121 2356677777755 6688888865431111000000
Q ss_pred CcEEEEEEeCCCCcEEEEEeCC------CeEEEEECCCCceeEe--ecCCCCeEEEEEecCCcEEEEEc----------C
Q 018784 146 GSIRTVAWLHSDQTILSSCTDS------GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYITTAD----------G 207 (350)
Q Consensus 146 ~~v~~~~~~~~~~~~~~s~~~d------g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~----------~ 207 (350)
..-.+++.. ++.+++.|+.+ ..+.+||+.+.+-... +.....-.++.. -++++++.+. -
T Consensus 92 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 92 RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEEC
T ss_pred ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccccc
Confidence 000111122 45666666654 4688999887642221 111111112222 3556554431 2
Q ss_pred CcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCC-----CeEEEEEcccCe--eEEeecCCCcCEEEEEEcC
Q 018784 208 SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED-----MWVHVFDFHTGE--QIGCNKGHHGPVHCVRFSP 280 (350)
Q Consensus 208 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~sp 280 (350)
..+.+||+.+..-...-.++............+++++.|+.+ ..+.+||+.+.+ .+..+........++.+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 458899987765433223332222222222246788888864 358889987653 22222111111222333
Q ss_pred CCCEEEEecCC-----CcEEEecCCC
Q 018784 281 GGESYASGSED-----GTIRIWQTNP 301 (350)
Q Consensus 281 ~~~~lasgs~D-----g~v~vw~~~~ 301 (350)
++.+++.|+.+ ..+.+||...
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 66788888855 3566776543
No 309
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.19 E-value=0.066 Score=46.32 Aligned_cols=209 Identities=12% Similarity=0.126 Sum_probs=95.9
Q ss_pred EEEEEeCCCCeeEeeCCCCceee-eccCccCCeEEEEECCCCcEEEEeeC----CC-------eEEEeeCCCCCeeee--
Q 018784 33 FLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA----DF-------TAKLWDALTGDEKHS-- 98 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~~~~~-~l~gH~~~V~~v~~~~~~~~l~s~s~----Dg-------~v~vWd~~~~~~~~~-- 98 (350)
+++.|+. .+.+||..+.++.. .+......-...+...++.+++.||. ++ .+.++|..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4555553 37889998888765 12211222222333456677666663 22 166778765542211
Q ss_pred eeccccEeEEEEcCCCCeEEEeeCC-------CeEEEEECCCCCCCCeeecCCCCcE--EEEEEeCCCCcEEEEEeC---
Q 018784 99 FEHKHIVRACAFSEDTHLLLTGGFE-------KILRIFDLNRPDAPPREVGNSSGSI--RTVAWLHSDQTILSSCTD--- 166 (350)
Q Consensus 99 ~~h~~~V~~~~~~~~~~~l~sg~~d-------~~v~vwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~s~~~--- 166 (350)
+.....-.+++. .++.+++.|+.+ ..+.+||+.+.+. .......... .+++. .++.+++.|+.
T Consensus 96 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 96 LPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDD 170 (318)
T ss_dssp BSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESCEEEE--ETTEEEEECCEESS
T ss_pred CCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCcccccEEEE--ECCEEEEEcCCCCC
Confidence 111111112221 256667777754 3477788764321 1111101000 11111 24556555543
Q ss_pred ---CCeEEEEECCCCce--eEeecCCCCeEEEEEecCCcEEE-EEcC-----CcEEEEECCCcceeeeeecCCCCceeEe
Q 018784 167 ---SGGVRLWDARSGKI--VQTLETKSPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFGLVKGYNMPCNTESASL 235 (350)
Q Consensus 167 ---dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~-~~~~-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 235 (350)
-..+.++|+.+.+= +..+.....-..++.. ++++++ .+.+ ..+.+||+.+..-...-.++........
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 13589999987642 2111111111222233 455544 3321 3577899877554332223322222222
Q ss_pred cCCCCcEEEEecCC
Q 018784 236 EPKLGNIFIAGGED 249 (350)
Q Consensus 236 ~~~~~~~l~sg~~d 249 (350)
....+.+++.|+.+
T Consensus 250 ~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 250 VSLAGSLYAIGGFA 263 (318)
T ss_dssp EEETTEEEEECCBC
T ss_pred EEECCEEEEECCee
Confidence 22246788888754
No 310
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.15 E-value=0.046 Score=47.52 Aligned_cols=153 Identities=10% Similarity=0.135 Sum_probs=99.3
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEECCCCceeEe-ecCC-------CCeEEEEE---ecCCcEEEEEc-----------
Q 018784 149 RTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQT-LETK-------SPVTSAEV---SRDGRYITTAD----------- 206 (350)
Q Consensus 149 ~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~-~~~~-------~~v~~~~~---~~~~~~l~~~~----------- 206 (350)
.++.|...++.++++.-..++|..||...+..... +..- ..+..+.+ .|+++++++.+
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 35678777888888887889999999976543322 2221 13567888 68888887543
Q ss_pred ---CCcEEEEECC---CcceeeeeecCC--------------CCceeEecCCCCcEEEEecCC-CeEEEEEcccCeeEEe
Q 018784 207 ---GSSVKFWDAN---HFGLVKGYNMPC--------------NTESASLEPKLGNIFIAGGED-MWVHVFDFHTGEQIGC 265 (350)
Q Consensus 207 ---~~~i~vwd~~---~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~sg~~d-~~i~v~d~~~~~~~~~ 265 (350)
+..+..||+. +.+.+....+.. ....+...+ .|+.+++++.. +.|..++.... .+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC-CEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC-EEee
Confidence 4568899998 666654444321 112233333 58888988888 88777775533 2222
Q ss_pred e-c----C-CCcCEEEEEEcCCCCEEEEecCCCcEEEecCCCCC
Q 018784 266 N-K----G-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTNPPN 303 (350)
Q Consensus 266 ~-~----~-h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~~~ 303 (350)
+ . . .....+.|+++|++..|+.....|.|.-+|+..+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv 217 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence 1 1 1 11125689999999887766559999999987443
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.99 E-value=0.055 Score=46.61 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=85.6
Q ss_pred CCCeEEEeeC----C-----CeEEEEECCCCCCCCee-ecCCCCcEEEEEEeCCCCcEEEEEeCC-----CeEEEEECCC
Q 018784 113 DTHLLLTGGF----E-----KILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARS 177 (350)
Q Consensus 113 ~~~~l~sg~~----d-----~~v~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~~~d-----g~i~iwd~~~ 177 (350)
++.+++.|+. + ..+.+||+.+....... ........ +++.. ++.+++.|+.+ ..+.+||+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 5666677765 2 35778887643211000 00011111 12222 45566655532 3688899887
Q ss_pred CceeEe--ecCCCCeEEEEEecCCcEEEEE-c-----CCcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCC
Q 018784 178 GKIVQT--LETKSPVTSAEVSRDGRYITTA-D-----GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED 249 (350)
Q Consensus 178 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~-----~~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 249 (350)
.+-... +.....-.+++.. ++++++.+ . -..+.+||+.+..-...-.++............+.+++.|+.+
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 225 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYD 225 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCC
Confidence 642211 1111111122222 55555443 2 2458899987755433222222222111112257888888865
Q ss_pred -----CeEEEEEcccCee--EEeecCCCcCEEEEEEcCCCCEEEEecCCC-----cEEEecC
Q 018784 250 -----MWVHVFDFHTGEQ--IGCNKGHHGPVHCVRFSPGGESYASGSEDG-----TIRIWQT 299 (350)
Q Consensus 250 -----~~i~v~d~~~~~~--~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg-----~v~vw~~ 299 (350)
..+.+||+.+.+= +..+...... .++... ++++++.|+.++ .|.+||.
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAPMKHRRSA-LGITVH-QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCCccceEEEEeCCCCcEEECCCCCCCccc-eEEEEE-CCEEEEEcCcCCCcccceEEEEcC
Confidence 4688999876542 2211111111 122222 567777777543 3555554
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.93 E-value=0.19 Score=44.36 Aligned_cols=223 Identities=14% Similarity=0.075 Sum_probs=116.4
Q ss_pred CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCC-eeeee----eccccEeEEEEcCC---CCeEEEeeC----C----CeE
Q 018784 63 AVWSCCLDANALFSASGSADFTAKLWDALTGD-EKHSF----EHKHIVRACAFSED---THLLLTGGF----E----KIL 126 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~-~~~~~----~h~~~V~~~~~~~~---~~~l~sg~~----d----~~v 126 (350)
.-+.+++.+++.++++ ..+|.|++++. .+. .+..+ ........++++|+ +..|+.+.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3468899999997776 45699999973 343 11111 12245789999997 444544332 3 567
Q ss_pred EEEECCCCCCCC-------eeec-CCCCcEEEEEEeCCCCcEEEEEeC-------------CCeEEEEECCCC-------
Q 018784 127 RIFDLNRPDAPP-------REVG-NSSGSIRTVAWLHSDQTILSSCTD-------------SGGVRLWDARSG------- 178 (350)
Q Consensus 127 ~vwd~~~~~~~~-------~~~~-~~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~iwd~~~~------- 178 (350)
..|++....... .... ........++|.+ ++.++++-++ .|+|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777765331110 0011 1011134567765 4456655432 145555554321
Q ss_pred --ceeEeecCCCCeEEEEEec-CCcEEEEEcCC----cEEEEECCC-c---------------ceeeee-ecCCCCceeE
Q 018784 179 --KIVQTLETKSPVTSAEVSR-DGRYITTADGS----SVKFWDANH-F---------------GLVKGY-NMPCNTESAS 234 (350)
Q Consensus 179 --~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~----~i~vwd~~~-~---------------~~~~~~-~~~~~~~~~~ 234 (350)
..+... .......++|+| +++++++-.+. .|.+..... + .++..+ ........+.
T Consensus 187 ~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~ 265 (354)
T 3a9g_A 187 PNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGAS 265 (354)
T ss_dssp TTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEE
T ss_pred CCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceE
Confidence 011111 122345788999 77777765432 344443211 0 011111 0011122223
Q ss_pred ec------CCCCcEEEEecCCCeEEEEEcccC-eeE--Ee-ecCCCcCEEEEEEcCCCCEEEEec
Q 018784 235 LE------PKLGNIFIAGGEDMWVHVFDFHTG-EQI--GC-NKGHHGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 235 ~~------~~~~~~l~sg~~d~~i~v~d~~~~-~~~--~~-~~~h~~~v~~l~~sp~~~~lasgs 289 (350)
+. ...+.++++....+.|...++... ... .. +.+-...+..+++.|||.++++..
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 31 134678888777888999988753 321 22 223345689999999998776653
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.85 E-value=0.096 Score=45.21 Aligned_cols=207 Identities=13% Similarity=0.072 Sum_probs=97.1
Q ss_pred EEEeeCCCeEEEeeCCCCCeee-eeecc-ccEeEEEEcCCCCeEEEeeC-----C------CeEEEEECCCCCCCCeeec
Q 018784 76 SASGSADFTAKLWDALTGDEKH-SFEHK-HIVRACAFSEDTHLLLTGGF-----E------KILRIFDLNRPDAPPREVG 142 (350)
Q Consensus 76 l~s~s~Dg~v~vWd~~~~~~~~-~~~h~-~~V~~~~~~~~~~~l~sg~~-----d------~~v~vwd~~~~~~~~~~~~ 142 (350)
++-|+ ..+.++|..+++-.. .+..+ ..........++.+++.|+. . ..+.+||+.+.+. ....
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--LGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--EECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE--EECC
Confidence 34444 568888887765221 11111 11222233456777777773 1 1266778764321 1111
Q ss_pred CCCCcE--EEEEEeCCCCcEEEEEeCC--------CeEEEEECCCCce--eEeecCCCCeEEEEEecCCcEEEEE-c-C-
Q 018784 143 NSSGSI--RTVAWLHSDQTILSSCTDS--------GGVRLWDARSGKI--VQTLETKSPVTSAEVSRDGRYITTA-D-G- 207 (350)
Q Consensus 143 ~~~~~v--~~~~~~~~~~~~~~s~~~d--------g~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~-~- 207 (350)
...... .+++.. ++.+++.|+.+ ..+.++|+.+.+= +..+.....-.+++. -++++++.+ . +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCC
Confidence 000000 112222 45566666532 4588999887642 111111111112222 445555443 2 1
Q ss_pred ----CcEEEEECCCcceeeeeecCCCCceeEecCCCCcEEEEecCCC-----eEEEEEcccCe--eEEeecCCCcCEEEE
Q 018784 208 ----SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDM-----WVHVFDFHTGE--QIGCNKGHHGPVHCV 276 (350)
Q Consensus 208 ----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~-----~i~v~d~~~~~--~~~~~~~h~~~v~~l 276 (350)
..+.+||+.+..-...-.++............+++++.|+.++ .+.+||+.+.+ .+..+.........+
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 3589999887654332223322222222222468888888654 57888887653 222211111111222
Q ss_pred EEcCCCCEEEEecCC
Q 018784 277 RFSPGGESYASGSED 291 (350)
Q Consensus 277 ~~sp~~~~lasgs~D 291 (350)
.+ ++++++.|+.+
T Consensus 241 ~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 241 SL--VGTLYAIGGFA 253 (315)
T ss_dssp EE--TTEEEEEEEEE
T ss_pred EE--CCEEEEECCcc
Confidence 22 56777777764
No 314
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.031 Score=49.05 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=100.9
Q ss_pred cEEEEEeCCCCeeEeeCCCCceeeeccCc-cCCeEEEEEC---CCCcEEEEe-eCCCeEEEeeCCCCCeeeeeeccccEe
Q 018784 32 FFLVSASKDSSPMLRNGETGDWIGTFEGH-KGAVWSCCLD---ANALFSASG-SADFTAKLWDALTGDEKHSFEHKHIVR 106 (350)
Q Consensus 32 ~~lasgs~d~~v~iw~~~~~~~~~~l~gH-~~~V~~v~~~---~~~~~l~s~-s~Dg~v~vWd~~~~~~~~~~~h~~~V~ 106 (350)
.+|+.++.||.+.-.|.++|+.+.+++.- ..++....-. .++..++.. ..||.+..++..++..+..+.-+..+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999998887653 1233221111 133444443 589999999988876555443222221
Q ss_pred E--EEEc-----------CCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCC-Cc-----EEEEEEe----CCCCcEEEE
Q 018784 107 A--CAFS-----------EDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-GS-----IRTVAWL----HSDQTILSS 163 (350)
Q Consensus 107 ~--~~~~-----------~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~-~~-----v~~~~~~----~~~~~~~~s 163 (350)
. +... ..+..+++|+.++.+...|+.+++.......... +. ..+.... ...+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 1 1111 1456788999999999999987765443322111 10 0000000 011123333
Q ss_pred EeCCCeEEEEECCCCceeEeecC----CCCeE-----EEEEecCCcEEEEEcCCcEEEEECCCcceee
Q 018784 164 CTDSGGVRLWDARSGKIVQTLET----KSPVT-----SAEVSRDGRYITTADGSSVKFWDANHFGLVK 222 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~~~~~~~~----~~~v~-----~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~ 222 (350)
+..+..+.+.+ ++|+ +..+.. ...+. .-....++.++++..++.|.-+|..++..+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 44445666655 4453 222110 00000 0001134666777778888888887776654
No 315
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.69 E-value=0.27 Score=42.69 Aligned_cols=158 Identities=10% Similarity=0.068 Sum_probs=101.0
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceee-eccC----ccC--CeEEEEE---CCCCcEEEEee-------
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEG----HKG--AVWSCCL---DANALFSASGS------- 80 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~-~l~g----H~~--~V~~v~~---~~~~~~l~s~s------- 80 (350)
.--++.|++ .++.++++.-..++|..|+...+.... .+.+ ... .+..+.+ .+++++++...
T Consensus 14 yPE~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CCcCccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 334666764 356777766688999999987654332 3433 111 3578889 68888887543
Q ss_pred ------CCCeEEEeeCC---CCCeeeeeec-------------c-ccEeEEEEcCCCCeEEEeeCC-CeEEEEECCCCCC
Q 018784 81 ------ADFTAKLWDAL---TGDEKHSFEH-------------K-HIVRACAFSEDTHLLLTGGFE-KILRIFDLNRPDA 136 (350)
Q Consensus 81 ------~Dg~v~vWd~~---~~~~~~~~~h-------------~-~~V~~~~~~~~~~~l~sg~~d-~~v~vwd~~~~~~ 136 (350)
.+..|..+|+. +++.+....- . .....++..++|+.-++++.- +.|...+......
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 26789999998 7776655431 1 247889999999988888877 7766666543211
Q ss_pred CCeeecC----CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCC
Q 018784 137 PPREVGN----SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSG 178 (350)
Q Consensus 137 ~~~~~~~----~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~ 178 (350)
....... ...-...+++.+++..+++.-+ .|.|.-+|+++.
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 1011111 1112446788776666666655 899999998843
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.56 E-value=0.24 Score=42.69 Aligned_cols=204 Identities=15% Similarity=0.139 Sum_probs=91.5
Q ss_pred eEEEeeCCCCCeee-eeec-cccEeEEEEcCCCCeEEEeeC----CC-------eEEEEECCCCCCCCeeecCCCCcEEE
Q 018784 84 TAKLWDALTGDEKH-SFEH-KHIVRACAFSEDTHLLLTGGF----EK-------ILRIFDLNRPDAPPREVGNSSGSIRT 150 (350)
Q Consensus 84 ~v~vWd~~~~~~~~-~~~h-~~~V~~~~~~~~~~~l~sg~~----d~-------~v~vwd~~~~~~~~~~~~~~~~~v~~ 150 (350)
.+.++|..+.+-.. .... ...........++.+++.|+. ++ .+.+||+.+.+............-.+
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 37788887665322 1111 111122233456777777773 11 16677875432110000000000111
Q ss_pred EEEeCCCCcEEEEEeCC-------CeEEEEECCCCceeEeecCCCCe-EEEEEecCCcEEEEEc-------CCcEEEEEC
Q 018784 151 VAWLHSDQTILSSCTDS-------GGVRLWDARSGKIVQTLETKSPV-TSAEVSRDGRYITTAD-------GSSVKFWDA 215 (350)
Q Consensus 151 ~~~~~~~~~~~~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~-------~~~i~vwd~ 215 (350)
++.. ++.+++.|+.+ ..+.++|+.+.+=...-..+.+. ...+...++++++.+. -..+.+||+
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 2222 45566555543 35888898876422211111111 1112224566554431 135899998
Q ss_pred CCcceeeeeecCCCCceeEecCCCCcEEEEecCC-----CeEEEEEcccCe--eEEeecCCCcCEEEEEEcCCCCEEEEe
Q 018784 216 NHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED-----MWVHVFDFHTGE--QIGCNKGHHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~sp~~~~lasg 288 (350)
.+..-...-.++............+.+++.|+.+ ..+.+||+.+.+ .+..+...... .++.. -++++++.|
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~i~v~G 260 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS-ISLVS-LAGSLYAIG 260 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS-CEEEE-ETTEEEEEC
T ss_pred CCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc-eEEEE-ECCEEEEEC
Confidence 8765433222332222111112246888888754 357788887643 22222111111 12222 256777777
Q ss_pred cCC
Q 018784 289 SED 291 (350)
Q Consensus 289 s~D 291 (350)
+.+
T Consensus 261 G~~ 263 (318)
T 2woz_A 261 GFA 263 (318)
T ss_dssp CBC
T ss_pred Cee
Confidence 754
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.56 E-value=0.87 Score=46.85 Aligned_cols=268 Identities=9% Similarity=0.038 Sum_probs=134.4
Q ss_pred ceeEEEecccCCCccEEEEEeCC---------CCeeEeeCCCCceeeeccCcc-CCeEEEEECCCCcEEEEeeCCCeEEE
Q 018784 18 PVVDLFYSPITPDGFFLVSASKD---------SSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSADFTAKL 87 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d---------~~v~iw~~~~~~~~~~l~gH~-~~V~~v~~~~~~~~l~s~s~Dg~v~v 87 (350)
.+-.+..+.+..+...|+.+.-. ..|++.+......+..+..-. ..|...+... . +++.++ .+.+.+
T Consensus 460 ~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~-~-~vvva~-g~~l~~ 536 (1158)
T 3ei3_A 460 EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNS-S-QVVVAV-GRALYY 536 (1158)
T ss_dssp EEEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEECS-S-EEEEEE-TTEEEE
T ss_pred cccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeCC-C-EEEEEE-CCEEEE
Confidence 44455555555566666666421 234556655444554554322 3465555543 3 333333 578888
Q ss_pred eeCCCCCe--eeeeeccccEeEEEEcCC------CCeEEEeeC-CCeEEEEECCCCCCCCeeecCCCCcEEEEEEeC-CC
Q 018784 88 WDALTGDE--KHSFEHKHIVRACAFSED------THLLLTGGF-EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLH-SD 157 (350)
Q Consensus 88 Wd~~~~~~--~~~~~h~~~V~~~~~~~~------~~~l~sg~~-d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 157 (350)
+++..+.. .....-...|.|+++.|. +.+++.|.+ |++++|+.+..-+..............++.... .+
T Consensus 537 fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~ 616 (1158)
T 3ei3_A 537 LQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES 616 (1158)
T ss_dssp EEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETT
T ss_pred EEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCC
Confidence 87765431 222234567999999763 468999997 999999999743222111111122344443321 23
Q ss_pred CcEEEEEeCCCeEEEE--ECCCCceeEe---ecCCCCeEEEEEecCCc-EEEEEcCCcEEEEECCCcceeeeeecCCCCc
Q 018784 158 QTILSSCTDSGGVRLW--DARSGKIVQT---LETKSPVTSAEVSRDGR-YITTADGSSVKFWDANHFGLVKGYNMPCNTE 231 (350)
Q Consensus 158 ~~~~~s~~~dg~i~iw--d~~~~~~~~~---~~~~~~v~~~~~~~~~~-~l~~~~~~~i~vwd~~~~~~~~~~~~~~~~~ 231 (350)
..++..|-.||.+.-+ |..+|+.... .-+..++.-..+...+. -+.+.++....++--++.-............
T Consensus 617 ~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~ 696 (1158)
T 3ei3_A 617 SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNY 696 (1158)
T ss_dssp EEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCE
T ss_pred CcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhce
Confidence 4567778888987655 4445544322 12334444333433332 2223333333333222211111112222223
Q ss_pred eeEecCCC-CcEEEEecCCCeEEEEEcccCeeEEee-cCCCcCEEEEEEcCCCCEEEEec
Q 018784 232 SASLEPKL-GNIFIAGGEDMWVHVFDFHTGEQIGCN-KGHHGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 232 ~~~~~~~~-~~~l~sg~~d~~i~v~d~~~~~~~~~~-~~h~~~v~~l~~sp~~~~lasgs 289 (350)
.+.|+... .+-++..+ ++.+++..+.+.+....- ..-...+..++++|..+.++.+.
T Consensus 697 ~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 697 MCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEE
T ss_pred EeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEE
Confidence 34444321 23333333 456998887543322211 11234688999999887765544
No 318
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.41 E-value=0.22 Score=43.64 Aligned_cols=91 Identities=10% Similarity=0.139 Sum_probs=45.0
Q ss_pred CccEEEEEeCC-CCeeEeeCCC--Cceee--ecc-CccCCeEEEEECCCCcEEEEeeC-C---------CeEEEeeCCCC
Q 018784 30 DGFFLVSASKD-SSPMLRNGET--GDWIG--TFE-GHKGAVWSCCLDANALFSASGSA-D---------FTAKLWDALTG 93 (350)
Q Consensus 30 dg~~lasgs~d-~~v~iw~~~~--~~~~~--~l~-gH~~~V~~v~~~~~~~~l~s~s~-D---------g~v~vWd~~~~ 93 (350)
++++.+.|+.+ ..+.++|..+ .++.. .+. .....-.++.+ ++.+++-||. + ..+.++|+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666777643 4577888763 55542 222 11111112222 5666666665 2 46788888765
Q ss_pred Ceeee--ee-ccccEeEEEEcCCCCeEEEeeCC
Q 018784 94 DEKHS--FE-HKHIVRACAFSEDTHLLLTGGFE 123 (350)
Q Consensus 94 ~~~~~--~~-h~~~V~~~~~~~~~~~l~sg~~d 123 (350)
+-... .. ....-.++. ..++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTF-VHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEE-EETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEE-EECCEEEEEeCcC
Confidence 42211 11 111111122 2567777778754
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.31 E-value=0.52 Score=41.54 Aligned_cols=183 Identities=16% Similarity=0.196 Sum_probs=101.5
Q ss_pred eEEEEcCCCCeEEEe------------eCCCeEEEEECCCCCCCCeee---cC----CCCcEEEEEEeC--CCC-cEEEE
Q 018784 106 RACAFSEDTHLLLTG------------GFEKILRIFDLNRPDAPPREV---GN----SSGSIRTVAWLH--SDQ-TILSS 163 (350)
Q Consensus 106 ~~~~~~~~~~~l~sg------------~~d~~v~vwd~~~~~~~~~~~---~~----~~~~v~~~~~~~--~~~-~~~~s 163 (350)
..+...|+|..++++ -.+|.|.++|+.++......+ .. .......+.+.. ++. ++++.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 445556666544443 268899999987433222211 11 123556666554 232 34444
Q ss_pred EeC--CCeEEEEECCCC-c---eeEeecC--CCCeEEEEEecCCcEEEEEc------------------CCcEEEEECCC
Q 018784 164 CTD--SGGVRLWDARSG-K---IVQTLET--KSPVTSAEVSRDGRYITTAD------------------GSSVKFWDANH 217 (350)
Q Consensus 164 ~~~--dg~i~iwd~~~~-~---~~~~~~~--~~~v~~~~~~~~~~~l~~~~------------------~~~i~vwd~~~ 217 (350)
... +.+|.+|++..+ . .+..+.. -...+.+.+.++|.+.++.. .+.|..+|...
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~ 212 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND 212 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe
Confidence 333 467888876543 2 2233332 24678999999999877653 13455555532
Q ss_pred cceeeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEccc-Cee--EEeecCCCcCEEEEEEcC-CCCEEEEecCC
Q 018784 218 FGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHT-GEQ--IGCNKGHHGPVHCVRFSP-GGESYASGSED 291 (350)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~-~~~--~~~~~~h~~~v~~l~~sp-~~~~lasgs~D 291 (350)
...+ ...-.....+.+.++...++++-+..+.|+.|++.. +.. ...+ ...+..-.+++.+ +|.+.+++..+
T Consensus 213 ~~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 213 VRVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp CEEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 1111 111123345667775456677777788999999863 332 1222 2245567788888 58877766544
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.23 E-value=0.53 Score=40.85 Aligned_cols=249 Identities=10% Similarity=0.083 Sum_probs=142.1
Q ss_pred CeeEeeCCCCceee--eccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEE
Q 018784 42 SPMLRNGETGDWIG--TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (350)
Q Consensus 42 ~v~iw~~~~~~~~~--~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s 119 (350)
++.|-|+.++.... .+.+ -+.-++|....+|--. ..+++|+|+++...+....-+..|.--.|-....+-+.
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lV 123 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 123 (365)
T ss_dssp EEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEE
T ss_pred EEEEEECCCCCCcccccccc-----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEE
Confidence 56666666543321 1221 1334678777766544 68899999999887777776677777777554433222
Q ss_pred eeCCCeEEEEECCCCCCCCeeecCC----CCcEEEEEEeCCCCcEEEEEe------CCCeEEEEECCCCceeEeecCCCC
Q 018784 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP 189 (350)
Q Consensus 120 g~~d~~v~vwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~~------~dg~i~iwd~~~~~~~~~~~~~~~ 189 (350)
. +..|.-|+++....+.+....| ...|......++...+++.|- -.|.+.+|..+.+.. +.++++..
T Consensus 124 T--~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa 200 (365)
T 2xzh_A 124 T--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAA 200 (365)
T ss_dssp E--SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEE
T ss_pred c--CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeee
Confidence 2 4578999987655544433222 345666655555555555443 126788888765532 33333322
Q ss_pred eEEEEEecCC-----cEEEEE----cCCcEEEEECCCc---c-ee--e--eeecCC-----CCceeEecCCCCcEEEEec
Q 018784 190 VTSAEVSRDG-----RYITTA----DGSSVKFWDANHF---G-LV--K--GYNMPC-----NTESASLEPKLGNIFIAGG 247 (350)
Q Consensus 190 v~~~~~~~~~-----~~l~~~----~~~~i~vwd~~~~---~-~~--~--~~~~~~-----~~~~~~~~~~~~~~l~sg~ 247 (350)
.. ..+-.+| .+++-+ .++.+++.++... . .. + ...++. .+.....+.+. .++..-+
T Consensus 201 ~F-~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviT 278 (365)
T 2xzh_A 201 SF-AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLIT 278 (365)
T ss_dssp EE-EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEE
T ss_pred ee-EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC-CEEEEEe
Confidence 11 1221111 233222 2357888887543 1 11 1 111211 12233344443 3455556
Q ss_pred CCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 248 EDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 248 ~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
.-|.|++||+.++.++..-+--..+|...+..+...-++.-...|.|.--.++.
T Consensus 279 K~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred CCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 789999999999999887777777787777665555566666778777665543
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.11 E-value=0.66 Score=41.74 Aligned_cols=139 Identities=14% Similarity=0.193 Sum_probs=89.0
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEeecCC-----CCeEEEEEecCCcEEEEEcCCcEEEEECCCcc-----------
Q 018784 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLETK-----SPVTSAEVSRDGRYITTADGSSVKFWDANHFG----------- 219 (350)
Q Consensus 156 ~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~----------- 219 (350)
.+..+++. .++.||.-++..+..-+.+... ..+..+..+|+|++|+......|.|..+....
T Consensus 31 n~t~i~~a--~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI--QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE--ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE--ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 34444433 2378998888754434444433 25788999999999999988899999886221
Q ss_pred -eeeeeecC-------CCCceeEecCC--CCcEEEEecCCCeEEEEEcccCe--eEEeec---------CCCcCEEEEEE
Q 018784 220 -LVKGYNMP-------CNTESASLEPK--LGNIFIAGGEDMWVHVFDFHTGE--QIGCNK---------GHHGPVHCVRF 278 (350)
Q Consensus 220 -~~~~~~~~-------~~~~~~~~~~~--~~~~l~sg~~d~~i~v~d~~~~~--~~~~~~---------~h~~~v~~l~~ 278 (350)
..+.+... .....+.++|. .+..|++=..|+.|++||+.... +. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 12233332 12344556664 35688888999999999997522 11 221 22256889999
Q ss_pred cCCCCEEEE--ecCCCcEEEe
Q 018784 279 SPGGESYAS--GSEDGTIRIW 297 (350)
Q Consensus 279 sp~~~~las--gs~Dg~v~vw 297 (350)
.+++=.|.. ....|.|+-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 987644444 5578887654
No 322
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.08 E-value=0.31 Score=42.69 Aligned_cols=135 Identities=10% Similarity=0.028 Sum_probs=60.9
Q ss_pred CeEEEEECCCCc--eeEeecCCCCe-EEEEEecCCcEEEEE-c------CCcEEEEEC--CCccee--eeeecCCCCcee
Q 018784 168 GGVRLWDARSGK--IVQTLETKSPV-TSAEVSRDGRYITTA-D------GSSVKFWDA--NHFGLV--KGYNMPCNTESA 233 (350)
Q Consensus 168 g~i~iwd~~~~~--~~~~~~~~~~v-~~~~~~~~~~~l~~~-~------~~~i~vwd~--~~~~~~--~~~~~~~~~~~~ 233 (350)
..+.++|+.+.+ .+..+...... .+++.. ++++++.+ . ...+.+||+ .+..-. .....+......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 478999988764 22222222122 233333 45554433 1 235677776 333222 222112111121
Q ss_pred EecCCCCcEEEEecCC----------------------CeEEEEEcccC--eeEEeecCCCcCEEEEEEcCCCCEEEEec
Q 018784 234 SLEPKLGNIFIAGGED----------------------MWVHVFDFHTG--EQIGCNKGHHGPVHCVRFSPGGESYASGS 289 (350)
Q Consensus 234 ~~~~~~~~~l~sg~~d----------------------~~i~v~d~~~~--~~~~~~~~h~~~v~~l~~sp~~~~lasgs 289 (350)
......+.+++.|+.+ ..+.+||+.+. +.+..+......-.++ .-++++++.|+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEee
Confidence 1222246888888842 25778888654 3443332211111222 23677888888
Q ss_pred CCC------cEEEecCCCCCcc
Q 018784 290 EDG------TIRIWQTNPPNHE 305 (350)
Q Consensus 290 ~Dg------~v~vw~~~~~~~~ 305 (350)
.++ .|.+.+++..+..
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCE
T ss_pred eCCCCCEeeeEEEEEEcCcEeE
Confidence 653 2444465544433
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.77 E-value=0.94 Score=39.88 Aligned_cols=179 Identities=12% Similarity=0.147 Sum_probs=96.2
Q ss_pred EEEECCCCcEEEEee------------CCCeEEEeeCCCCC-eeeeeec--------cccEeEEEEcC--CCC--eEEEe
Q 018784 66 SCCLDANALFSASGS------------ADFTAKLWDALTGD-EKHSFEH--------KHIVRACAFSE--DTH--LLLTG 120 (350)
Q Consensus 66 ~v~~~~~~~~l~s~s------------~Dg~v~vWd~~~~~-~~~~~~h--------~~~V~~~~~~~--~~~--~l~sg 120 (350)
.+.+.++|..+++++ .+|.|.++|..+.. ....+.. .-....+.+.+ +++ ++++-
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 345677877766652 78999999986431 1122221 12466777755 343 33432
Q ss_pred e--CCCeEEEEECCCCCCCCeee----cCCCCcEEEEEEeCCCCcEEEEEe-----------------CCCeEEEEECCC
Q 018784 121 G--FEKILRIFDLNRPDAPPREV----GNSSGSIRTVAWLHSDQTILSSCT-----------------DSGGVRLWDARS 177 (350)
Q Consensus 121 ~--~d~~v~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~s~~-----------------~dg~i~iwd~~~ 177 (350)
. .+.+|.+|++.......... ...-.....+.+.+ ++.++++.. ..|.|..+|.
T Consensus 134 h~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-- 210 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-- 210 (355)
T ss_dssp CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred CCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence 2 25788898876433222111 12234566777664 455555543 1245555555
Q ss_pred CceeEeecCCCCeEEEEEecCCcEEEEEc--CCcEEEEECCCc-c--eeeeeecCCCCceeEecCCCCcEEEEec
Q 018784 178 GKIVQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHF-G--LVKGYNMPCNTESASLEPKLGNIFIAGG 247 (350)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~vwd~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 247 (350)
++.......-...+.++|+||++.+..++ .+.|..||+... . ..+.+..+..+..+.+...+|++++++.
T Consensus 211 ~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 211 NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 33222223334568899999998765543 568999987532 2 2223333333344445442367777554
No 324
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.77 E-value=0.93 Score=39.80 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=57.8
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCce--eeecc---CccCCeEEEEECCC----CcEEEEeeCC-----C
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFE---GHKGAVWSCCLDAN----ALFSASGSAD-----F 83 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~--~~~l~---gH~~~V~~v~~~~~----~~~l~s~s~D-----g 83 (350)
..+.++|.| ||+++++ ..++.|++++ +++. +..+. .-......++++|+ +.+.++-... .
T Consensus 32 ~P~~ia~~p---dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 32 VPWALAFLP---DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CEEEEEECT---TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CceEEEEcC---CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 345788876 9986665 5568888887 4432 22221 12345688999998 5555554432 5
Q ss_pred eEEEeeCCCCC---eeee---eec----cccEeEEEEcCCCCeEEEee
Q 018784 84 TAKLWDALTGD---EKHS---FEH----KHIVRACAFSEDTHLLLTGG 121 (350)
Q Consensus 84 ~v~vWd~~~~~---~~~~---~~h----~~~V~~~~~~~~~~~l~sg~ 121 (350)
.|..++..... .... +.. ......++|.|+|.+.++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 67777765331 1111 221 12346899999997666643
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.50 E-value=1.4 Score=39.90 Aligned_cols=229 Identities=11% Similarity=0.107 Sum_probs=133.3
Q ss_pred EEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCC--
Q 018784 67 CCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS-- 144 (350)
Q Consensus 67 v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~-- 144 (350)
.-++|....+|--. ..+++|+|+++...+....-+..|.--.|-....+-++ .+..|.-|++.....+.+....|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV--T~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV--TDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE--CSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE--cCCeeEEecccCCCCchhheecchh
Confidence 34677776666543 78999999999887777665556655555433332222 24578999987644444433222
Q ss_pred --CCcEEEEEEeCCCCcEEEEEe------CCCeEEEEECCCCceeEeecCCCCeEEEEEecCC-----cEEEEE----cC
Q 018784 145 --SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDG-----RYITTA----DG 207 (350)
Q Consensus 145 --~~~v~~~~~~~~~~~~~~s~~------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~----~~ 207 (350)
...|......++...+++.|- -.|.+.+|.++.+.. +.++++.... ..+-.+| .+++-+ .+
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F-~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASF-AQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEE-EEEECTTCSSEEEEEEEEECSTTC
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeee-EEEecCCCCCCceEEEEEEecCCC
Confidence 345666665555555555442 226788888765532 3333332211 1222121 233222 24
Q ss_pred CcEEEEECCCc---c-ee--e--eeecCC-----CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEE
Q 018784 208 SSVKFWDANHF---G-LV--K--GYNMPC-----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVH 274 (350)
Q Consensus 208 ~~i~vwd~~~~---~-~~--~--~~~~~~-----~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~ 274 (350)
+.+++.++... . .. + ...++. .+.....++.. .++..-+.-|.|++||+.++.++..-+--..+|.
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 68899988543 1 11 1 111111 12233444443 3445556789999999999999988777777887
Q ss_pred EEEEcCCCCEEEEecCCCcEEEecCCC
Q 018784 275 CVRFSPGGESYASGSEDGTIRIWQTNP 301 (350)
Q Consensus 275 ~l~~sp~~~~lasgs~Dg~v~vw~~~~ 301 (350)
..+..+...-++.-...|.|.--.++.
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred EecccCCCCcEEEEccCceEEEEEEcc
Confidence 777766655666666888877766543
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.33 E-value=2.1 Score=44.62 Aligned_cols=227 Identities=11% Similarity=0.109 Sum_probs=122.0
Q ss_pred EECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeeccccEeEEEEcCCCCe-EEEeeCCCeEEEEECCCCCCCCeeecCC--
Q 018784 68 CLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHL-LLTGGFEKILRIFDLNRPDAPPREVGNS-- 144 (350)
Q Consensus 68 ~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~V~~~~~~~~~~~-l~sg~~d~~v~vwd~~~~~~~~~~~~~~-- 144 (350)
-++|....+|-- ...+++|+|+++...+....-+..|.--.|-....+ |+| +..|.-|++.....|.+....|
T Consensus 72 IMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 72 IMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred ccCCCcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchh
Confidence 356777666654 378999999988876666655556666666444333 333 4579999997544443332222
Q ss_pred --CCcEEEEEEeCCCCcEEEEEe------CCCeEEEEECCCCceeEeecCCCC-eEEEEEe---cCCcEEEEE----cCC
Q 018784 145 --SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP-VTSAEVS---RDGRYITTA----DGS 208 (350)
Q Consensus 145 --~~~v~~~~~~~~~~~~~~s~~------~dg~i~iwd~~~~~~~~~~~~~~~-v~~~~~~---~~~~~l~~~----~~~ 208 (350)
...|......++...+++.|- -.|.+.+|.++.+.. +.+.++.. ...+... +...+++-+ .++
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 344555555555555555543 236788887765432 12222211 1111111 111222211 246
Q ss_pred cEEEEECCCc----ceee----eeecCC-----CCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEE
Q 018784 209 SVKFWDANHF----GLVK----GYNMPC-----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHC 275 (350)
Q Consensus 209 ~i~vwd~~~~----~~~~----~~~~~~-----~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~ 275 (350)
.+++.++... .... ...++. .+.....++.. .++..-+.-|.|++||+.+|..+..-+--..+|..
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~ 305 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (1630)
T ss_pred eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccchhhhhccccCCceEE
Confidence 7888887543 1111 011111 12223333333 34445567899999999999988766555666666
Q ss_pred EEEcCCCCEEEEecCCCcEEEecCC
Q 018784 276 VRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 276 l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
.+..+...-++.....|.|.--.++
T Consensus 306 ~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 306 TAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred eccCCCCCceEEEcCCceEEEEEEc
Confidence 6555443344444566666555443
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.99 E-value=1.5 Score=42.44 Aligned_cols=191 Identities=8% Similarity=-0.019 Sum_probs=95.6
Q ss_pred CccEEEEEeCC----CCeeEeeCCCCceeeec-c-----CccC--CeEEEEECCCCcEEEEeeCCC------eEEEeeCC
Q 018784 30 DGFFLVSASKD----SSPMLRNGETGDWIGTF-E-----GHKG--AVWSCCLDANALFSASGSADF------TAKLWDAL 91 (350)
Q Consensus 30 dg~~lasgs~d----~~v~iw~~~~~~~~~~l-~-----gH~~--~V~~v~~~~~~~~l~s~s~Dg------~v~vWd~~ 91 (350)
++.+++.|+.+ ..+.+||..+.++...- . .... .-.++.+..++.+++.||.++ .+.++|..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 56677777754 34678888887765422 1 1111 112223322667777776543 46777876
Q ss_pred CCCeeee--eeccccEeEEEEcCCCCeEEEeeCCC--eEEEEECCCCCCCCee----ecCCCCcEEEEEEeCCCCcEEEE
Q 018784 92 TGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPRE----VGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 92 ~~~~~~~--~~h~~~V~~~~~~~~~~~l~sg~~d~--~v~vwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
+..-... +.....-.+++.-.++.+++.||.++ .+.+||+.+....... ..........+.+....+.+++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 6532111 11111112333324778888887654 6888988653211100 00011111223333333566666
Q ss_pred EeC--C-----CeEEEEECCCCce-----eEeec----CCCCeEEEEEecCCcEEEEEc---------CCcEEEEECCCc
Q 018784 164 CTD--S-----GGVRLWDARSGKI-----VQTLE----TKSPVTSAEVSRDGRYITTAD---------GSSVKFWDANHF 218 (350)
Q Consensus 164 ~~~--d-----g~i~iwd~~~~~~-----~~~~~----~~~~v~~~~~~~~~~~l~~~~---------~~~i~vwd~~~~ 218 (350)
|+. + +.+.+||+.+.+- ...+. ....-.++....++++++.+. ...+.+||+.+.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 654 2 4688999987761 11111 111112233344356554432 235899998876
Q ss_pred ce
Q 018784 219 GL 220 (350)
Q Consensus 219 ~~ 220 (350)
..
T Consensus 637 ~W 638 (695)
T 2zwa_A 637 TL 638 (695)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.95 E-value=1 Score=36.65 Aligned_cols=137 Identities=9% Similarity=-0.039 Sum_probs=72.6
Q ss_pred CCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeeeecccc--------EeEEEEcCCCCeEEEeeCCCeEEEEECCC
Q 018784 62 GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHI--------VRACAFSEDTHLLLTGGFEKILRIFDLNR 133 (350)
Q Consensus 62 ~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~h~~~--------V~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 133 (350)
..+..++|+|++.+.+. .+|.+.--+..+.....-+..... ..++.|.|+|.+.++ .|+.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35668999999997766 667655555433222111111112 478999999987776 568887776532
Q ss_pred CCCCC-----eeecC-CCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCCCce------eEeec--CCCCeEEEEEecCC
Q 018784 134 PDAPP-----REVGN-SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI------VQTLE--TKSPVTSAEVSRDG 199 (350)
Q Consensus 134 ~~~~~-----~~~~~-~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~~~~------~~~~~--~~~~v~~~~~~~~~ 199 (350)
..... ..++. .=..+..+.+. +++.+.+.. |+.+.-+...++.. ...+. .......+.|.+++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~-p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CCCCceeccccEeccCCCCceEEEEEC-CCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 22111 11111 11345566555 455555554 66654443332210 11111 11234456688888
Q ss_pred cEEEEE
Q 018784 200 RYITTA 205 (350)
Q Consensus 200 ~~l~~~ 205 (350)
.+.+..
T Consensus 194 ~l~~v~ 199 (236)
T 1tl2_A 194 TLFGVQ 199 (236)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 877666
No 329
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.86 E-value=2.1 Score=38.52 Aligned_cols=107 Identities=14% Similarity=0.194 Sum_probs=69.1
Q ss_pred cEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCe-------------eecC----CCCcEEEEEEeCCC--CcEEEEE
Q 018784 104 IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-------------EVGN----SSGSIRTVAWLHSD--QTILSSC 164 (350)
Q Consensus 104 ~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-------------~~~~----~~~~v~~~~~~~~~--~~~~~s~ 164 (350)
.+..+..+|+|++||..+ +..|.|-.+..+..... ..+. ....|..+.|.|-. +..++.-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 467799999999988775 56889988873321111 1111 24679999998753 3477777
Q ss_pred eCCCeEEEEECCCC--ceeEeecC----------CCCeEEEEEecCCcEE-EEE--cCCcEEE
Q 018784 165 TDSGGVRLWDARSG--KIVQTLET----------KSPVTSAEVSRDGRYI-TTA--DGSSVKF 212 (350)
Q Consensus 165 ~~dg~i~iwd~~~~--~~~~~~~~----------~~~v~~~~~~~~~~~l-~~~--~~~~i~v 212 (350)
..|++|++||+... ++. .+.. ...+.+++|.+++-.| +.. .+|.|.-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 89999999999752 222 3321 1467888998876433 322 4555543
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.85 E-value=1.3 Score=36.07 Aligned_cols=101 Identities=13% Similarity=-0.012 Sum_probs=62.2
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCe--------EEEEECCCCcEEEEeeCCCeEEEe
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV--------WSCCLDANALFSASGSADFTAKLW 88 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V--------~~v~~~~~~~~l~s~s~Dg~v~vW 88 (350)
..+..++|+| +|.+-+. .++.+.-.+..+.....-+. -...| .++.|++++.+.++ .||.|.-|
T Consensus 41 ~~~~~laf~P---~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSP---GGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECT---TSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECC---CccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEe
Confidence 4777999997 8887776 55665444443311110011 01222 57889999999887 67999888
Q ss_pred eCCCCCeee-----eeecc---ccEeEEEEcCCCCeEEEeeCCCeEE
Q 018784 89 DALTGDEKH-----SFEHK---HIVRACAFSEDTHLLLTGGFEKILR 127 (350)
Q Consensus 89 d~~~~~~~~-----~~~h~---~~V~~~~~~~~~~~l~sg~~d~~v~ 127 (350)
+..+..... ..-.. ..+..|.|.|+|.+-+.. |+.+.
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 864432211 11111 457999999999876666 66643
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.78 E-value=1.9 Score=37.72 Aligned_cols=221 Identities=13% Similarity=0.158 Sum_probs=116.1
Q ss_pred CCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee--e-----eccccEeEEEEcCC---CCeEEEe---eCCCeEEE
Q 018784 62 GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS--F-----EHKHIVRACAFSED---THLLLTG---GFEKILRI 128 (350)
Q Consensus 62 ~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~--~-----~h~~~V~~~~~~~~---~~~l~sg---~~d~~v~v 128 (350)
..-+.+++.+++.++++--..|.|++++...+..... + ........++|+|+ +..|+.. ..+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4457899999999988876689999998655543221 1 12346789999995 3444432 23455666
Q ss_pred EECCCCC-----C-CCe----ee---cCCCCcEEEEEEeCCCCcEEEEEeC-------------CCeEEEEECCCC----
Q 018784 129 FDLNRPD-----A-PPR----EV---GNSSGSIRTVAWLHSDQTILSSCTD-------------SGGVRLWDARSG---- 178 (350)
Q Consensus 129 wd~~~~~-----~-~~~----~~---~~~~~~v~~~~~~~~~~~~~~s~~~-------------dg~i~iwd~~~~---- 178 (350)
|.+.... . ..+ .. ..|. ...++|.+ ++.++++.++ -|+|.-.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 6654311 0 011 11 1122 33567765 4456655432 244444444321
Q ss_pred -----ceeEeecCCCCeEEEEEecCCcEEEEEcC--C--cEEEEECC-Ccce--ee------ee-----ecC-C--CCce
Q 018784 179 -----KIVQTLETKSPVTSAEVSRDGRYITTADG--S--SVKFWDAN-HFGL--VK------GY-----NMP-C--NTES 232 (350)
Q Consensus 179 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~--~i~vwd~~-~~~~--~~------~~-----~~~-~--~~~~ 232 (350)
..+... .......++|+|+|.+.++-.+ + .|...... .+.. .. .+ ... . ....
T Consensus 189 nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G 267 (347)
T 3das_A 189 NPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSG 267 (347)
T ss_dssp CSSTTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEE
T ss_pred CCCCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcc
Confidence 111111 2223457889998888776542 2 23333211 1100 00 00 000 0 1112
Q ss_pred eEecCCCCcEEEEecCCCeEEEEEcccCee----EEeecCCCcCEEEEEEcCCCCEEEEe
Q 018784 233 ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ----IGCNKGHHGPVHCVRFSPGGESYASG 288 (350)
Q Consensus 233 ~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~----~~~~~~h~~~v~~l~~sp~~~~lasg 288 (350)
+.+. .+.+|+..-..+.|....+..... ...+.+....+..|+..|||.++++-
T Consensus 268 ~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 268 IAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp EEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred eEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 2232 356777766777777777765432 23344555679999999999876653
No 332
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.46 E-value=2.3 Score=37.23 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=37.2
Q ss_pred CCcEEEEecCCCeEEEEEcccCeeEEe---ecCCCcCEEEEEEcCCCCEEEEe-cCCCc
Q 018784 239 LGNIFIAGGEDMWVHVFDFHTGEQIGC---NKGHHGPVHCVRFSPGGESYASG-SEDGT 293 (350)
Q Consensus 239 ~~~~l~sg~~d~~i~v~d~~~~~~~~~---~~~h~~~v~~l~~sp~~~~lasg-s~Dg~ 293 (350)
.+.++++....+.|...++..+..+.. +......+..+++.|||.++++. ..+|.
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 467788877788888888876543322 22334578999999999877643 34453
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.17 E-value=4.3 Score=39.21 Aligned_cols=189 Identities=12% Similarity=0.078 Sum_probs=91.4
Q ss_pred CCCcEEEEeeCC----CeEEEeeCCCCCeeeee--------eccccEeEEEEcC-CCCeEEEeeCCC------eEEEEEC
Q 018784 71 ANALFSASGSAD----FTAKLWDALTGDEKHSF--------EHKHIVRACAFSE-DTHLLLTGGFEK------ILRIFDL 131 (350)
Q Consensus 71 ~~~~~l~s~s~D----g~v~vWd~~~~~~~~~~--------~h~~~V~~~~~~~-~~~~l~sg~~d~------~v~vwd~ 131 (350)
.++.+++.||.+ ..+.++|..++.-...- .....-.+++..+ ++.+++.||.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456666667654 45777887766422211 1111112333333 677777777543 4778887
Q ss_pred CCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCC--eEEEEECCCCceeEeecC------C-CCeEEEEEecC-CcE
Q 018784 132 NRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLET------K-SPVTSAEVSRD-GRY 201 (350)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg--~i~iwd~~~~~~~~~~~~------~-~~v~~~~~~~~-~~~ 201 (350)
.+..............-.+++... ++.+++.|+.++ .+.+||+.+.+= ..+.. . .....+.+..+ +++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIF-KDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEE-EECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCce-EEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 653211000000000011122222 556666666543 689999987642 11111 1 11222444544 555
Q ss_pred EEEE-c--C-----CcEEEEECCCcc------eeeeeecC-CCCceeEecCCC-CcEEEEecCC--------CeEEEEEc
Q 018784 202 ITTA-D--G-----SSVKFWDANHFG------LVKGYNMP-CNTESASLEPKL-GNIFIAGGED--------MWVHVFDF 257 (350)
Q Consensus 202 l~~~-~--~-----~~i~vwd~~~~~------~~~~~~~~-~~~~~~~~~~~~-~~~l~sg~~d--------~~i~v~d~ 257 (350)
++.+ . + ..+.+||+.+.. .......+ ............ +.+++.|+.+ ..+.+||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 5543 2 1 358889987765 11111111 111111111123 6888888843 45899998
Q ss_pred ccCe
Q 018784 258 HTGE 261 (350)
Q Consensus 258 ~~~~ 261 (350)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7654
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.53 E-value=4.3 Score=36.98 Aligned_cols=110 Identities=12% Similarity=0.133 Sum_probs=62.8
Q ss_pred ceeEeeccCCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCcee--eeccC------ccCCeEEEEECC----CCcE
Q 018784 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI--GTFEG------HKGAVWSCCLDA----NALF 75 (350)
Q Consensus 8 ~~~~~~gH~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~--~~l~g------H~~~V~~v~~~~----~~~~ 75 (350)
+-.+..+ -...+.++|.| +|+++++-...+.|++++..+++.. ..+.. .......++++| ++.+
T Consensus 19 ~~~~a~~-l~~P~~~a~~p---dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 19 KKVILSN-LNKPHALLWGP---DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp EEEEECC-CSSEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEE
T ss_pred EEEEECC-CCCceEEEEcC---CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEE
Confidence 3334344 33456898886 9998887554456887776555432 22321 245678899998 4555
Q ss_pred EEEeeC------------CCeEEEeeCCCCC-----eeeee---e--ccccEeEEEEcCCCCeEEEee
Q 018784 76 SASGSA------------DFTAKLWDALTGD-----EKHSF---E--HKHIVRACAFSEDTHLLLTGG 121 (350)
Q Consensus 76 l~s~s~------------Dg~v~vWd~~~~~-----~~~~~---~--h~~~V~~~~~~~~~~~l~sg~ 121 (350)
.++-+. ...|.-++..... ....+ . .......++|.|+|.+.++.+
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 555432 1244445443211 11111 1 123468899999998777644
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.25 E-value=3.7 Score=35.91 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=57.2
Q ss_pred cEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCC-CCe----eecCCCCcEEEEEEeCC---CCcEEEEEeC-------CC
Q 018784 104 IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPR----EVGNSSGSIRTVAWLHS---DQTILSSCTD-------SG 168 (350)
Q Consensus 104 ~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~----~~~~~~~~v~~~~~~~~---~~~~~~s~~~-------dg 168 (350)
....++|.|+|..|+.+...+.|++++...... ... ......+....+++.++ ++.++++-.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 468999999998344556678999998532111 000 11122345678888764 5666665433 23
Q ss_pred eEEEEECCCC--c-----ee-EeecC----CCCeEEEEEecCCcEEEEE
Q 018784 169 GVRLWDARSG--K-----IV-QTLET----KSPVTSAEVSRDGRYITTA 205 (350)
Q Consensus 169 ~i~iwd~~~~--~-----~~-~~~~~----~~~v~~~~~~~~~~~l~~~ 205 (350)
.|..++.... + .+ ..+.. ......+.|.|+|.++++.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 4666665432 1 11 11111 1123569999999776664
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.77 E-value=0.3 Score=42.74 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=68.7
Q ss_pred EEEEEeCCCeEEEEECCCCceeEeecCC--CCeEEEEEe---cCCcEEEE--EcCCcEEEEECCCcceeeeeecCCCCce
Q 018784 160 ILSSCTDSGGVRLWDARSGKIVQTLETK--SPVTSAEVS---RDGRYITT--ADGSSVKFWDANHFGLVKGYNMPCNTES 232 (350)
Q Consensus 160 ~~~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~---~~~~~l~~--~~~~~i~vwd~~~~~~~~~~~~~~~~~~ 232 (350)
+++.++.||.|.-.|..+|+.+..++.. .+.....-. .++..++. ..+|.+..++..++.....+..+.....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 4666788999999999999999888764 332221100 12334444 3678888888877644433333211111
Q ss_pred --eEec--C--------CCCcEEEEecCCCeEEEEEcccCeeEEeec
Q 018784 233 --ASLE--P--------KLGNIFIAGGEDMWVHVFDFHTGEQIGCNK 267 (350)
Q Consensus 233 --~~~~--~--------~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~ 267 (350)
+... | ..+..+.+|+.++++...|+.+|+.+-.+.
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1100 0 135788899999999999999999876664
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.16 E-value=1.5 Score=40.87 Aligned_cols=106 Identities=10% Similarity=0.134 Sum_probs=68.0
Q ss_pred eeccccEeEEEEcCCCCeEEEee-CCCeEEEEECCCC------CC-----CCeeecCCCCcEEEEEEeCCCCcEEEEEeC
Q 018784 99 FEHKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRP------DA-----PPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (350)
Q Consensus 99 ~~h~~~V~~~~~~~~~~~l~sg~-~d~~v~vwd~~~~------~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 166 (350)
+.-......+.++|||++++.++ -+.++.++|..+- .. .........-.....+|.+ ++....+..-
T Consensus 319 iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfi 397 (638)
T 3sbq_A 319 VPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFI 397 (638)
T ss_dssp EEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETT
T ss_pred EeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeee
Confidence 34455677899999999887655 5889999998631 11 0000111222355667765 4567778889
Q ss_pred CCeEEEEECCCC----------ceeEeecCCCCeEEEEE------ecCCcEEEEE
Q 018784 167 SGGVRLWDARSG----------KIVQTLETKSPVTSAEV------SRDGRYITTA 205 (350)
Q Consensus 167 dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~l~~~ 205 (350)
|..|.-|++... ..+..+..+-.+-.+.. .++|++|++.
T Consensus 398 dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 398 DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred cceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 999999998653 34555555555545544 4688998875
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.04 E-value=5.8 Score=34.68 Aligned_cols=195 Identities=13% Similarity=0.084 Sum_probs=101.5
Q ss_pred CceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCc-eeeecc---CccCCeEEEEECCC----CcEEEEeeC---C---
Q 018784 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFE---GHKGAVWSCCLDAN----ALFSASGSA---D--- 82 (350)
Q Consensus 17 ~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~-~~~~l~---gH~~~V~~v~~~~~----~~~l~s~s~---D--- 82 (350)
...+.++|.| ||+++++ ..++.|++++ .+++ .+..+. .-......++++|+ +.+.++-+. +
T Consensus 29 ~~P~~ia~~p---dG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLG---GGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEE---TTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcC---CCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456888887 8986665 5558888887 3454 222221 12345788999997 555555432 3
Q ss_pred -CeEEEeeCCCC--C---eeee---ee--ccccEeEEEEcCCCCeEEEeeC-------------CCeEEEEECCCCCCC-
Q 018784 83 -FTAKLWDALTG--D---EKHS---FE--HKHIVRACAFSEDTHLLLTGGF-------------EKILRIFDLNRPDAP- 137 (350)
Q Consensus 83 -g~v~vWd~~~~--~---~~~~---~~--h~~~V~~~~~~~~~~~l~sg~~-------------d~~v~vwd~~~~~~~- 137 (350)
..|..|+.... . .... +. .......++|.|+|.+.++-+. .+.|.-++.+. ..+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~ 182 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPA 182 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCC
Confidence 56667765443 1 1111 11 1123467999999987776442 14555555532 110
Q ss_pred ------CeeecCCCCcEEEEEEeCCCCcEEEEEeCCC---eEEEEECCC--------C--------ceeEee-cCCCCeE
Q 018784 138 ------PREVGNSSGSIRTVAWLHSDQTILSSCTDSG---GVRLWDARS--------G--------KIVQTL-ETKSPVT 191 (350)
Q Consensus 138 ------~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg---~i~iwd~~~--------~--------~~~~~~-~~~~~v~ 191 (350)
.............++|.+.++.++++-...+ .|.+..... + .++..+ .......
T Consensus 183 ~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp TSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 1111111122446777764555555432221 233332110 0 122233 2234566
Q ss_pred EEEEe-------cCCcEEEEEc-CCcEEEEECCC
Q 018784 192 SAEVS-------RDGRYITTAD-GSSVKFWDANH 217 (350)
Q Consensus 192 ~~~~~-------~~~~~l~~~~-~~~i~vwd~~~ 217 (350)
.+.|. .+|.++++.. .+.|...++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 77773 4677776654 45677777764
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.03 E-value=9.4 Score=37.08 Aligned_cols=266 Identities=12% Similarity=0.034 Sum_probs=140.6
Q ss_pred eeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee
Q 018784 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (350)
Q Consensus 19 v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~ 98 (350)
|.++...+ ++..|-.|+. +-+..++..+++......-....|.++....++.+.+.. ++-+.+++..+......
T Consensus 193 i~~i~~d~---~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT--~~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 193 VNSLLEDT---TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT--DNGLYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEEEET---TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE--TTEEEEECCTTSCCEEE
T ss_pred eEEEEEEC---CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe--CCceeEEecCCCcEEEE
Confidence 66665543 4544333443 347778877665432111123458888888888887654 34577888765543222
Q ss_pred ee--------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeee-------cCCCCcEEEEEEeCCCCcEEEE
Q 018784 99 FE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-------GNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 99 ~~--------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~s 163 (350)
.. ..+.|.++....++.+ ..|...| +.++.... ..... ......|.++... .++.+.+.
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~---~~~~~~~~~~~~~~~~~~v~~i~~D-~~g~lWiG 340 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNS---ALQFIPISQITGTGDGNQFYSLFRD-SKGFYWFG 340 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEEC-TTCCEEEE
T ss_pred EcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCC---ceeEEecccCCCCCCCceEEEEEEc-CCCCEEEe
Confidence 11 1245888887777764 4455556 44443221 11111 0123457776543 34444443
Q ss_pred EeCCCeEEEEECCCCc--eeEeec--------CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcceeeeeec-CC----
Q 018784 164 CTDSGGVRLWDARSGK--IVQTLE--------TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM-PC---- 228 (350)
Q Consensus 164 ~~~dg~i~iwd~~~~~--~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~~~~~~~-~~---- 228 (350)
+.+ .+..++..+++ ....+. ....|.++....++++.++. ++.+..||..+..... +.. ..
T Consensus 341 -t~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~-~~~~~~~~~~ 416 (758)
T 3ott_A 341 -GAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQFIH-YNIVDNTGTY 416 (758)
T ss_dssp -ETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEE-EEEECCC--C
T ss_pred -eCC-cceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEE-eecCCCcCCC
Confidence 444 56677765532 111111 12357888888888877766 4578999987654322 211 00
Q ss_pred -CCceeEecCCCCcEEEEecCCCeEEEEEcccC-----eeEE---ee---cCC-CcCEEEEEEcCCCCEEEEecCCCcEE
Q 018784 229 -NTESASLEPKLGNIFIAGGEDMWVHVFDFHTG-----EQIG---CN---KGH-HGPVHCVRFSPGGESYASGSEDGTIR 295 (350)
Q Consensus 229 -~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~-----~~~~---~~---~~h-~~~v~~l~~sp~~~~lasgs~Dg~v~ 295 (350)
......+..+....|..|+..+-|.++|..+. .... .+ .+- ...|.++...++|.+.+.++..+-|.
T Consensus 417 ~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~ 496 (758)
T 3ott_A 417 NTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGID 496 (758)
T ss_dssp BSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEE
T ss_pred CCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcE
Confidence 11112222222344555676666888886531 1111 11 111 23589999988888766333334466
Q ss_pred EecCC
Q 018784 296 IWQTN 300 (350)
Q Consensus 296 vw~~~ 300 (350)
.+|..
T Consensus 497 ~~d~~ 501 (758)
T 3ott_A 497 KINPR 501 (758)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 67654
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.37 E-value=10 Score=34.45 Aligned_cols=58 Identities=10% Similarity=0.009 Sum_probs=37.7
Q ss_pred CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeee--ee-------ccccEeEEEEcCC---CCeEEEe
Q 018784 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS--FE-------HKHIVRACAFSED---THLLLTG 120 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~--~~-------h~~~V~~~~~~~~---~~~l~sg 120 (350)
.-+.++|.+++.++++-...+.|++++..++..... +. .......++|+|+ +..|+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 446899999999988765445788887655543221 11 1345679999995 4445443
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.44 E-value=17 Score=36.60 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=31.1
Q ss_pred CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee
Q 018784 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~ 99 (350)
.+.+++..++..+++|-+.|+++|||++.++.+..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566777788889999999999999999998877654
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.98 E-value=35 Score=32.98 Aligned_cols=269 Identities=11% Similarity=0.055 Sum_probs=141.1
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCceeeecc-------CccCCeEEEEECCCCcEEEEeeCCCeEEEeeC
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~~~l~-------gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~ 90 (350)
.|.++...+ +|.+.+ |+. +-+.+++..+++...... -....|+++..+.++.+-+.. ..| +.+...
T Consensus 233 ~i~~i~~d~---~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT-~~G-l~~~~~ 305 (758)
T 3ott_A 233 SIKSLALDG---NGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT-DYG-ISLSRY 305 (758)
T ss_dssp EEEEEEECT---TCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE-SSS-EEEECC
T ss_pred eEEEEEEcC---CCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe-CCc-cccccc
Confidence 355565443 565554 444 346777776655432111 023468999988888776644 335 444432
Q ss_pred CCCCeeeeee------ccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCC-CCeeec-------CCCCcEEEEEEeCC
Q 018784 91 LTGDEKHSFE------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPREVG-------NSSGSIRTVAWLHS 156 (350)
Q Consensus 91 ~~~~~~~~~~------h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~-------~~~~~v~~~~~~~~ 156 (350)
...-...... ....|.++.-..+|.+- .|..+| +..++..+... ...... -....|.++.-..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lW-iGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~- 382 (758)
T 3ott_A 306 NSALQFIPISQITGTGDGNQFYSLFRDSKGFYW-FGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK- 382 (758)
T ss_dssp CC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEE-EEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT-
T ss_pred CCceeEEecccCCCCCCCceEEEEEEcCCCCEE-EeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECC-
Confidence 1111111110 12458888777777644 445554 55565443211 111110 1124577775433
Q ss_pred CCcEEEEEeCCCeEEEEECCCCceeEee--c-----CCCCeEEEEEecCCcEEEEEcCCcEEEEECCCc-----cee---
Q 018784 157 DQTILSSCTDSGGVRLWDARSGKIVQTL--E-----TKSPVTSAEVSRDGRYITTADGSSVKFWDANHF-----GLV--- 221 (350)
Q Consensus 157 ~~~~~~s~~~dg~i~iwd~~~~~~~~~~--~-----~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~-----~~~--- 221 (350)
++.+.+ |+. +-|..+|.++++..... . ....+.++...+++.+.++..++.+.++|..+. ...
T Consensus 383 ~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~ 460 (758)
T 3ott_A 383 EQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAE 460 (758)
T ss_dssp TSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECS
T ss_pred CCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecc
Confidence 344444 343 57999998877543321 1 123577888888888888776667888885431 111
Q ss_pred eeee----cCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeec-C--CCcCEEEEEEcCCCCEEEEecCCCcE
Q 018784 222 KGYN----MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNK-G--HHGPVHCVRFSPGGESYASGSEDGTI 294 (350)
Q Consensus 222 ~~~~----~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~-~--h~~~v~~l~~sp~~~~lasgs~Dg~v 294 (350)
..+. ++............+++.+.++..+-|..+|..+++...... . ....+.++....+|.+.+. +..| |
T Consensus 461 ~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l 538 (758)
T 3ott_A 461 QNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-V 538 (758)
T ss_dssp EEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-E
T ss_pred cccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-e
Confidence 1111 111112222333456766644444558888987765443221 1 1346788888888876654 4455 6
Q ss_pred EEecCC
Q 018784 295 RIWQTN 300 (350)
Q Consensus 295 ~vw~~~ 300 (350)
..++..
T Consensus 539 ~~~~~~ 544 (758)
T 3ott_A 539 MRINPK 544 (758)
T ss_dssp EEECC-
T ss_pred EEEecC
Confidence 666643
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=81.27 E-value=23 Score=29.67 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=110.6
Q ss_pred CeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeee-eeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeee
Q 018784 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV 141 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 141 (350)
.|..++......+++ . ||.|..|-....-.+. .......|..++...+...++ . |+.|..|-......... .
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~-P 97 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTV-P 97 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCC-C
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCC-C
Confidence 465666554433333 3 8999999754322111 111223566776655444333 4 89999997654322111 1
Q ss_pred cCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEECCC-CceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCcce
Q 018784 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGL 220 (350)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~~~ 220 (350)
......|..++.-. ...+++ . ||.|..|-... ++.-........+..++.-.+..++.. ++.|..|-......
T Consensus 98 ~~~~~~v~~ia~G~-~hs~al--~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGA-WASYAL--K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK--NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEET-TEEEEE--E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE--TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcC-CEEEEE--e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE--CCEEEEecCCCCCC
Confidence 11134677777542 222333 4 79999997644 332112222345666655544444333 68888887654332
Q ss_pred eeeeecCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCeeEEeecCCCcCEEEEEEcCCCCEEEEecCCCcEEEecCC
Q 018784 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTN 300 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg~v~vw~~~ 300 (350)
+.. ..........+..-....++. .|+.|+.|-....-++.....-...|..++....-.++++ ||.|+.|-..
T Consensus 172 lg~-p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n 245 (282)
T 3qhy_B 172 TTV-PAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWGSS 245 (282)
T ss_dssp TSC-CGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEESTT
T ss_pred CCC-ceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEecCC
Confidence 210 000001111111111233444 4888888865432222111111235777777554333333 9999999765
Q ss_pred CCCc
Q 018784 301 PPNH 304 (350)
Q Consensus 301 ~~~~ 304 (350)
...+
T Consensus 246 ~~gq 249 (282)
T 3qhy_B 246 RTAP 249 (282)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 4433
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=72.73 E-value=56 Score=29.65 Aligned_cols=191 Identities=9% Similarity=0.080 Sum_probs=106.8
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEE-CCCCcEEEEeeCCCeEEEeeCCCC-Ceeeeee-c----c
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL-DANALFSASGSADFTAKLWDALTG-DEKHSFE-H----K 102 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~-~~~~~~l~s~s~Dg~v~vWd~~~~-~~~~~~~-h----~ 102 (350)
..+++|--. ..++.|+|+++.+.++.+.-.+ .|.-=.| +++..-++| +..|.-|+++.. .+...+. | .
T Consensus 76 ~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~ 150 (494)
T 1bpo_A 76 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 150 (494)
T ss_dssp SSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred CCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEEc---CCeeEEecccCCCCchhheecchhccc
Confidence 345666655 6889999999988887766444 3433334 455455554 789999998643 3444443 2 2
Q ss_pred ccEeEEEEcCCCCeEEEee-------CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCC--CCcEEEEEeCC---CeE
Q 018784 103 HIVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS--DQTILSSCTDS---GGV 170 (350)
Q Consensus 103 ~~V~~~~~~~~~~~l~sg~-------~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~~~d---g~i 170 (350)
..|-.-..+++.++++..| -.|.+.+|..++.. ...+.+|.+....+..... ...+++-+... +++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 228 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc--cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 3455566688888876543 23667888887432 2233334332222211100 11233323222 688
Q ss_pred EEEECCCC---ce-----eEeecC-----CCCeEEEEEecCC-cEEEEEcCCcEEEEECCCcceeeeeecC
Q 018784 171 RLWDARSG---KI-----VQTLET-----KSPVTSAEVSRDG-RYITTADGSSVKFWDANHFGLVKGYNMP 227 (350)
Q Consensus 171 ~iwd~~~~---~~-----~~~~~~-----~~~v~~~~~~~~~-~~l~~~~~~~i~vwd~~~~~~~~~~~~~ 227 (350)
.+-++... .. ...+.. ..-..++.+++.- -......-|.+.+||+.++.++..-...
T Consensus 229 hi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp EEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc
Confidence 88888432 11 111111 1113356666644 3445567789999999998887654443
No 345
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.90 E-value=36 Score=32.85 Aligned_cols=30 Identities=10% Similarity=0.202 Sum_probs=24.9
Q ss_pred CCCcEEEEeeCCCeEEEeeCCCCCeeeeee
Q 018784 71 ANALFSASGSADFTAKLWDALTGDEKHSFE 100 (350)
Q Consensus 71 ~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~~ 100 (350)
.+..++++-+.|.++|+|++.++.+.....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 347799999999999999999988766543
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.67 E-value=98 Score=29.06 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=49.2
Q ss_pred cCCCCceeEecCCCCcEEEEecCCCeEEEEEcccCee-------------EEeecCCCcCEEEEEEcCCCCEEEEecCCC
Q 018784 226 MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ-------------IGCNKGHHGPVHCVRFSPGGESYASGSEDG 292 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sg~~d~~i~v~d~~~~~~-------------~~~~~~h~~~v~~l~~sp~~~~lasgs~Dg 292 (350)
.+..+..+.+.|+...++++|-.+.++-++|+..... +.... -.-.....+|.++|..+.|--.|.
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTT
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecc
Confidence 3344445566665334555666788999999874211 11111 223468899999996667777999
Q ss_pred cEEEecCCC
Q 018784 293 TIRIWQTNP 301 (350)
Q Consensus 293 ~v~vw~~~~ 301 (350)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999754
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=63.06 E-value=76 Score=27.56 Aligned_cols=191 Identities=9% Similarity=0.080 Sum_probs=105.6
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEE-CCCCcEEEEeeCCCeEEEeeCCCC-Ceeeeee-c----c
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL-DANALFSASGSADFTAKLWDALTG-DEKHSFE-H----K 102 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~-~~~~~~l~s~s~Dg~v~vWd~~~~-~~~~~~~-h----~ 102 (350)
..+++|--. ..++.|+|+++.+.++.+.-. ..|.-=.| +++..-|+| +..|.-|+++.. .+...+. | .
T Consensus 77 ~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 77 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred CccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeeecchhccc
Confidence 455777665 688999999999888776543 45544445 444445665 788999998643 3444443 2 2
Q ss_pred ccEeEEEEcCCCCeEEEeeC-------CCeEEEEECCCCCCCCeeecCCCCcEEEEEEe--CCCCcEEEEEeC---CCeE
Q 018784 103 HIVRACAFSEDTHLLLTGGF-------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWL--HSDQTILSSCTD---SGGV 170 (350)
Q Consensus 103 ~~V~~~~~~~~~~~l~sg~~-------d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~s~~~---dg~i 170 (350)
..|-.-..+++.++++..|- .|.+.+|..++.. ...+.+|.+....+... +....+++-+.. -+++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc--cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 34555566788887765432 3667788876432 12223332222111110 001122222221 1588
Q ss_pred EEEECCCC---ce-----eEeecC-----CCCeEEEEEecCC-cEEEEEcCCcEEEEECCCcceeeeeecC
Q 018784 171 RLWDARSG---KI-----VQTLET-----KSPVTSAEVSRDG-RYITTADGSSVKFWDANHFGLVKGYNMP 227 (350)
Q Consensus 171 ~iwd~~~~---~~-----~~~~~~-----~~~v~~~~~~~~~-~~l~~~~~~~i~vwd~~~~~~~~~~~~~ 227 (350)
.+-++... .. ...+.. ..-..++.+++.- -......-|.+.+||+.++.++..-...
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 88888432 11 111111 1112356666543 3445567789999999998887654443
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.17 E-value=20 Score=36.78 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=29.4
Q ss_pred eEEEEECCCCcEEEEeeCCCeEEEeeCCCCCeeeee
Q 018784 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (350)
Q Consensus 64 V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~~~~ 99 (350)
+.+++..++..++++-+.|+++|||++.++.++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344555677889999999999999999999877664
No 349
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=59.50 E-value=1.8e+02 Score=30.82 Aligned_cols=187 Identities=9% Similarity=0.074 Sum_probs=97.7
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeeccCccCCeEEEEE-CCCCcEEEEeeCCCeEEEeeCCCC-Ceeeeee-c----c
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL-DANALFSASGSADFTAKLWDALTG-DEKHSFE-H----K 102 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~gH~~~V~~v~~-~~~~~~l~s~s~Dg~v~vWd~~~~-~~~~~~~-h----~ 102 (350)
..+++|--. ..++.|+|+++.+.++++.-. ..|.-=.| +++..-++| +..|.-|++... .+...+. | .
T Consensus 76 ~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~ 150 (1630)
T 1xi4_A 76 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 150 (1630)
T ss_pred CcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhccc
Confidence 345666654 688999999888777665543 34433344 455555665 788999998642 2322222 2 2
Q ss_pred ccEeEEEEcCCCCeEEEee-------CCCeEEEEECCCCCCCCeeecCCCCcEEEEEEe--CCCCcEEEEEeC---CCeE
Q 018784 103 HIVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL--HSDQTILSSCTD---SGGV 170 (350)
Q Consensus 103 ~~V~~~~~~~~~~~l~sg~-------~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~s~~~---dg~i 170 (350)
..|-.-..+++.++++..| -.|.+.+|.+++... ..+.+|.+....+... +....+++-+.. -+++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kL 228 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceE
Confidence 3455555677888776433 347788888764322 1122222221111110 011112221111 1688
Q ss_pred EEEECCCC---ceeEe-----ecCC-----CCeEEEEEecC-CcEEEEEcCCcEEEEECCCcceeee
Q 018784 171 RLWDARSG---KIVQT-----LETK-----SPVTSAEVSRD-GRYITTADGSSVKFWDANHFGLVKG 223 (350)
Q Consensus 171 ~iwd~~~~---~~~~~-----~~~~-----~~v~~~~~~~~-~~~l~~~~~~~i~vwd~~~~~~~~~ 223 (350)
.|-++... ..... +..+ .-..++.+++. |-.......|.+.++|+.++.++..
T Consensus 229 hi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 88887432 11110 0000 01123455543 3344556678999999998877644
No 350
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=56.09 E-value=1.5e+02 Score=28.63 Aligned_cols=227 Identities=9% Similarity=-0.014 Sum_probs=106.9
Q ss_pred cCCCccEEEEE-eCCC----CeeEeeCCCCceee-eccCccC-C-------eEEEEECCCCcEEEEe----------eCC
Q 018784 27 ITPDGFFLVSA-SKDS----SPMLRNGETGDWIG-TFEGHKG-A-------VWSCCLDANALFSASG----------SAD 82 (350)
Q Consensus 27 ~s~dg~~lasg-s~d~----~v~iw~~~~~~~~~-~l~gH~~-~-------V~~v~~~~~~~~l~s~----------s~D 82 (350)
++|++++++.+ |..| +++++|+++++.+. .|. ... . -..++|-.+..++++. +..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 34588655433 3333 38899999998864 222 111 0 0223555444554432 223
Q ss_pred CeEEEeeCCCCC--eeeeeec--cccEeEEEEcCCCCe-----EEEeeCC---CeEEEEECCCCCCCCeee-cCCCCcEE
Q 018784 83 FTAKLWDALTGD--EKHSFEH--KHIVRACAFSEDTHL-----LLTGGFE---KILRIFDLNRPDAPPREV-GNSSGSIR 149 (350)
Q Consensus 83 g~v~vWd~~~~~--~~~~~~h--~~~V~~~~~~~~~~~-----l~sg~~d---~~v~vwd~~~~~~~~~~~-~~~~~~v~ 149 (350)
..|+.|.+.+.. ....+.. ...-.+...++++.+ +++.+.+ ..+.+.++..+......+ ......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT-- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce--
Confidence 668899887653 2223322 222233445666652 4443322 344555655322221111 111111
Q ss_pred EEEEeCCCCcEEEEE----------eCCCeEEEEECCCCc-------eeEe-ecC--CCCeEEEEEecCCcEEEEEcCC-
Q 018784 150 TVAWLHSDQTILSSC----------TDSGGVRLWDARSGK-------IVQT-LET--KSPVTSAEVSRDGRYITTADGS- 208 (350)
Q Consensus 150 ~~~~~~~~~~~~~s~----------~~dg~i~iwd~~~~~-------~~~~-~~~--~~~v~~~~~~~~~~~l~~~~~~- 208 (350)
+.... ++.+++.. ...+.|...|+.++. .... +.. ...+..+.+..+..+++...++
T Consensus 294 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 371 (711)
T 4hvt_A 294 -LQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVV 371 (711)
T ss_dssp -EEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTE
T ss_pred -EeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCE
Confidence 11222 33343321 134678888886642 2222 222 3456677777765444444454
Q ss_pred -cEEEEECCCcc-eeee-eecCCC-C-ceeEecCCCCcEEEEecC---CCeEEEEEcc
Q 018784 209 -SVKFWDANHFG-LVKG-YNMPCN-T-ESASLEPKLGNIFIAGGE---DMWVHVFDFH 258 (350)
Q Consensus 209 -~i~vwd~~~~~-~~~~-~~~~~~-~-~~~~~~~~~~~~l~sg~~---d~~i~v~d~~ 258 (350)
.+.++|+.++. .... ..++.. . ......+..+.++++.+. -..+..+|+.
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 47778765443 2222 333321 1 112223333455555443 3567788876
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.13 E-value=13 Score=37.43 Aligned_cols=29 Identities=21% Similarity=0.045 Sum_probs=25.7
Q ss_pred CCccEEEEEeCCCCeeEeeCCCCceeeec
Q 018784 29 PDGFFLVSASKDSSPMLRNGETGDWIGTF 57 (350)
Q Consensus 29 ~dg~~lasgs~d~~v~iw~~~~~~~~~~l 57 (350)
++..+|.+-+.|+++|||++.+++++.+.
T Consensus 245 ~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 245 STYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 46779999999999999999999998764
No 352
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=55.11 E-value=1e+02 Score=26.62 Aligned_cols=103 Identities=19% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCceeEEEecccCCCccEEEEEeCCCCeeEeeCCCCcee--eec----cCccCCeEEEEECCC----CcEEEE--eeCCC
Q 018784 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI--GTF----EGHKGAVWSCCLDAN----ALFSAS--GSADF 83 (350)
Q Consensus 16 ~~~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~~~~~--~~l----~gH~~~V~~v~~~~~----~~~l~s--~s~Dg 83 (350)
-...+.++|.| ||+++++-...+.|++++..+++.. ..+ .........++++|+ +.+.++ ...+.
T Consensus 31 L~~P~~ia~~p---dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 31 LNSPWGLAPLP---GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CSSEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCCceEEEEcC---CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 44567888886 9998887665899998886655542 222 223456789999985 555553 23445
Q ss_pred eEEEeeCCCC--------Ceeeee---e--ccccEeEEEEcCCCCeEEEee
Q 018784 84 TAKLWDALTG--------DEKHSF---E--HKHIVRACAFSEDTHLLLTGG 121 (350)
Q Consensus 84 ~v~vWd~~~~--------~~~~~~---~--h~~~V~~~~~~~~~~~l~sg~ 121 (350)
.|.-|....+ .....+ . ....-..+.|.|+|.+.++.+
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 5555554331 111111 1 112346799999998777754
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=51.33 E-value=1.4e+02 Score=26.98 Aligned_cols=106 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred ccEeEEEEcCCCC-eEEEeeCCCeEEEEECCCCCCCCeeecCC-----------CCcEEEEEEeCC---CCcEEEEEeCC
Q 018784 103 HIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNS-----------SGSIRTVAWLHS---DQTILSSCTDS 167 (350)
Q Consensus 103 ~~V~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~~~-----------~~~v~~~~~~~~---~~~~~~s~~~d 167 (350)
...+.++|.|++. .|+.+...|.|++++............-. .+....+++.|. ++.++++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Q ss_pred C------------eEEEEECC----------CCceeEeec---CCCCeEEEEEecCCcEEEEEcCC
Q 018784 168 G------------GVRLWDAR----------SGKIVQTLE---TKSPVTSAEVSRDGRYITTADGS 208 (350)
Q Consensus 168 g------------~i~iwd~~----------~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~ 208 (350)
. .|.-|.+. +.+.+..+. .......+.|.|||++.++..++
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.42 E-value=19 Score=34.64 Aligned_cols=29 Identities=7% Similarity=0.153 Sum_probs=25.2
Q ss_pred CccEEEEEeCCCCeeEeeCCCCceeeecc
Q 018784 30 DGFFLVSASKDSSPMLRNGETGDWIGTFE 58 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~~~~~~~l~ 58 (350)
+..+|++-+.|+++|||++.+++++.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 45699999999999999999999887654
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.67 E-value=14 Score=37.90 Aligned_cols=29 Identities=21% Similarity=0.045 Sum_probs=25.7
Q ss_pred CCccEEEEEeCCCCeeEeeCCCCceeeec
Q 018784 29 PDGFFLVSASKDSSPMLRNGETGDWIGTF 57 (350)
Q Consensus 29 ~dg~~lasgs~d~~v~iw~~~~~~~~~~l 57 (350)
++..+|.+-+.|+++|||++.+++++.+.
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 36789999999999999999999998764
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=38.22 E-value=1.7e+02 Score=24.18 Aligned_cols=181 Identities=12% Similarity=0.062 Sum_probs=94.9
Q ss_pred ceeEEEecccCCCccEEEEEeCCCCeeEeeCCC-CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCCCCCee
Q 018784 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (350)
Q Consensus 18 ~v~~~~~~~~s~dg~~lasgs~d~~v~iw~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~~~~~~ 96 (350)
.|..|+.. ..+.++. . |+++..|-... +++-... .-...|..++......+++ . ||.|..|-....-.+
T Consensus 25 ~i~~ia~G----~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGG----YFHGLAL-K-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEEC----SSEEEEE-E-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeC----CCeEEEE-E-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCC
Confidence 56666654 3344554 4 89988887443 2221111 1123566666654444444 3 899999975432111
Q ss_pred ee-eeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEEEeCCCeEEEEEC
Q 018784 97 HS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (350)
Q Consensus 97 ~~-~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~dg~i~iwd~ 175 (350)
.. ..-...|..++...+...++ . |+.|..|-.......... ......|..++.-. ...+++ . ||.|..|-.
T Consensus 95 g~P~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~-~~~~~l--~-~G~v~~wG~ 166 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGV-YTALAV--K-NGGVIAWGD 166 (282)
T ss_dssp CCCGGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECS-SEEEEE--E-TTEEEEEEC
T ss_pred CCCcccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEccc-CEEEEE--E-CCEEEEecC
Confidence 10 11123577776665544444 3 899999976543322111 11234577776432 222333 3 699999976
Q ss_pred CC-CceeEeecCCCCeEEEEEecCCcEEEEEcCCcEEEEECCCc
Q 018784 176 RS-GKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (350)
Q Consensus 176 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~vwd~~~~ 218 (350)
.. ++.-........+..++.-.+..++. .++.|..|-....
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTT
T ss_pred CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCC
Confidence 54 22211111234566666655544444 5888999976543
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=38.04 E-value=2.8e+02 Score=26.66 Aligned_cols=230 Identities=16% Similarity=0.114 Sum_probs=109.1
Q ss_pred ECCCCcEEE-E---eeCC-CeEEEeeCCCCCeeee-ee--ccc------cEeEEEEcCCCCeEEEe----------eCCC
Q 018784 69 LDANALFSA-S---GSAD-FTAKLWDALTGDEKHS-FE--HKH------IVRACAFSEDTHLLLTG----------GFEK 124 (350)
Q Consensus 69 ~~~~~~~l~-s---~s~D-g~v~vWd~~~~~~~~~-~~--h~~------~V~~~~~~~~~~~l~sg----------~~d~ 124 (350)
++|++.+++ + ||.| ..++++|+.+++.+.- +. .+. ....++|..+..++++. +.-.
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 788887654 2 2333 5799999988865421 11 001 01233555444444432 2246
Q ss_pred eEEEEECCCCCCCCee-ecCCCCcE-EEEEEeCCCCc----EEEEEeCC---CeEEEEECCC--CceeEeecCCCCeEEE
Q 018784 125 ILRIFDLNRPDAPPRE-VGNSSGSI-RTVAWLHSDQT----ILSSCTDS---GGVRLWDARS--GKIVQTLETKSPVTSA 193 (350)
Q Consensus 125 ~v~vwd~~~~~~~~~~-~~~~~~~v-~~~~~~~~~~~----~~~s~~~d---g~i~iwd~~~--~~~~~~~~~~~~v~~~ 193 (350)
.|+.|.+.++...-.. .......+ .....+.+.+. ++++.+.+ ..+.+.|... ++ +..+..+.... +
T Consensus 217 ~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~-~ 294 (711)
T 4hvt_A 217 SLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDAT-L 294 (711)
T ss_dssp EEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTCE-E
T ss_pred EEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcce-E
Confidence 7899988654322211 12122222 23333333332 45554422 3466666553 33 23333332222 2
Q ss_pred EEecCCcEEEEE-----------cCCcEEEEECCCcc-------eeeeeecCCCCc-eeEecCCCCcEEEEecCCCe--E
Q 018784 194 EVSRDGRYITTA-----------DGSSVKFWDANHFG-------LVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMW--V 252 (350)
Q Consensus 194 ~~~~~~~~l~~~-----------~~~~i~vwd~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~l~sg~~d~~--i 252 (350)
....++.+++.. ..+.|...|+.+.. ..+.+-.+.... ...+....+.++++...++. +
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l 374 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKV 374 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEE
Confidence 234455555422 24567778876532 111111121111 11222223467777777764 6
Q ss_pred EEEEcccCe-eEEe-ecCC-CcCEEEEEEcCCCC-EEEEecC---CCcEEEecCC
Q 018784 253 HVFDFHTGE-QIGC-NKGH-HGPVHCVRFSPGGE-SYASGSE---DGTIRIWQTN 300 (350)
Q Consensus 253 ~v~d~~~~~-~~~~-~~~h-~~~v~~l~~sp~~~-~lasgs~---Dg~v~vw~~~ 300 (350)
+++|+.++. .+.. +.-. .+.+......+++. ++++.+. -..+..+|..
T Consensus 375 ~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 375 VTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 778877664 2222 2111 24566666777764 4444332 3567777764
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.00 E-value=1.5e+02 Score=27.75 Aligned_cols=59 Identities=19% Similarity=0.092 Sum_probs=38.6
Q ss_pred CeEEEEECCCCcEEEEeeCC------------CeEEEeeCCCCCeeeeeec--cccEeEEEEcCCCCeEEEee
Q 018784 63 AVWSCCLDANALFSASGSAD------------FTAKLWDALTGDEKHSFEH--KHIVRACAFSEDTHLLLTGG 121 (350)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D------------g~v~vWd~~~~~~~~~~~h--~~~V~~~~~~~~~~~l~sg~ 121 (350)
.-..|.|+++|.+.+..... ..|...+..+++....+.- ...++.++|+||++.|+..-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34678899999887732111 1455556666765554432 24589999999999887653
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.67 E-value=2.5e+02 Score=24.56 Aligned_cols=163 Identities=11% Similarity=0.078 Sum_probs=88.3
Q ss_pred CeeEeeCCCC--ceeeeccC------ccCCeEEEEEC---CC----CcE-EEEeeCCCeEEEeeCCCCCeeeeeec----
Q 018784 42 SPMLRNGETG--DWIGTFEG------HKGAVWSCCLD---AN----ALF-SASGSADFTAKLWDALTGDEKHSFEH---- 101 (350)
Q Consensus 42 ~v~iw~~~~~--~~~~~l~g------H~~~V~~v~~~---~~----~~~-l~s~s~Dg~v~vWd~~~~~~~~~~~h---- 101 (350)
++.+||+.+. +.++.+.= ....+..+.+. +. ..+ .+|=+..+.|.|+|+.+++..+.+.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4667999998 88776532 12345666666 22 223 34444678999999988775544320
Q ss_pred ---------------cccEeEEEEcCC----CCeEEEeeCCCeEEEEEC-----CCCC--CCCeeecCCC--CcEEEEEE
Q 018784 102 ---------------KHIVRACAFSED----THLLLTGGFEKILRIFDL-----NRPD--APPREVGNSS--GSIRTVAW 153 (350)
Q Consensus 102 ---------------~~~V~~~~~~~~----~~~l~sg~~d~~v~vwd~-----~~~~--~~~~~~~~~~--~~v~~~~~ 153 (350)
...+..++++|+ ++.|+=..-.+. ++|.+ .... ...+..+... ......+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 135778888887 555543332221 33332 1111 1122222221 22223333
Q ss_pred eCCCCcEEEEEeCCCeEEEEECCC-C---ceeEeecCC---CCeEEEEEecCCcEEEEE
Q 018784 154 LHSDQTILSSCTDSGGVRLWDARS-G---KIVQTLETK---SPVTSAEVSRDGRYITTA 205 (350)
Q Consensus 154 ~~~~~~~~~s~~~dg~i~iwd~~~-~---~~~~~~~~~---~~v~~~~~~~~~~~l~~~ 205 (350)
.+.++.++++--+.+.|..|+..+ . +.+..+... .-...+.+.++|.+.+.+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 345677888888888999999875 1 122222221 234566666666554444
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=32.21 E-value=2.4e+02 Score=24.23 Aligned_cols=263 Identities=10% Similarity=-0.089 Sum_probs=0.0
Q ss_pred EEEEEeCCCCeeEeeCCCCceeeec--cCccCCeEEEEECC--CCcEEEEeeCC----CeEEEeeCCCCCeeeeee----
Q 018784 33 FLVSASKDSSPMLRNGETGDWIGTF--EGHKGAVWSCCLDA--NALFSASGSAD----FTAKLWDALTGDEKHSFE---- 100 (350)
Q Consensus 33 ~lasgs~d~~v~iw~~~~~~~~~~l--~gH~~~V~~v~~~~--~~~~l~s~s~D----g~v~vWd~~~~~~~~~~~---- 100 (350)
.|..|+..+-+++-+...++.-..+ .--...|.+++++| .+.+.+.+... +..+.=|-...=......
T Consensus 24 ~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~ 103 (394)
T 3b7f_A 24 MLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFN 103 (394)
T ss_dssp EEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCC
T ss_pred EEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCC
Q ss_pred ---------ccccEeEEEEcCC--CCeEEEeeCCCeEEEEECCCCCCCCeee-----------------cCCCCcEEEEE
Q 018784 101 ---------HKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPPREV-----------------GNSSGSIRTVA 152 (350)
Q Consensus 101 ---------h~~~V~~~~~~~~--~~~l~sg~~d~~v~vwd~~~~~~~~~~~-----------------~~~~~~v~~~~ 152 (350)
....|.++++.|. ...|+.+...+.|...+-....-..... ......+.++.
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~ 183 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSIL 183 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEE
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEE
Q ss_pred EeCCCCcEEEEEeCCCeEEEEECCCCceeEeecC--------------CCCeEEEEEecC--CcEEEEEcCCcEEEEECC
Q 018784 153 WLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET--------------KSPVTSAEVSRD--GRYITTADGSSVKFWDAN 216 (350)
Q Consensus 153 ~~~~~~~~~~s~~~dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~~~~--~~~l~~~~~~~i~vwd~~ 216 (350)
+.+.+...+..+..++.|...+ ..++....+.. ...+..+.+.|+ +.++++..++..+.-|-.
T Consensus 184 ~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G 262 (394)
T 3b7f_A 184 VDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRRE 262 (394)
T ss_dssp ECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTT
T ss_pred ECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCC
Q ss_pred CcceeeeeecCC----CCceeEecCCCCcEEEEecC-----------CCeEEEEEcccCeeEEeecCCCcCE--------
Q 018784 217 HFGLVKGYNMPC----NTESASLEPKLGNIFIAGGE-----------DMWVHVFDFHTGEQIGCNKGHHGPV-------- 273 (350)
Q Consensus 217 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~sg~~-----------d~~i~v~d~~~~~~~~~~~~h~~~v-------- 273 (350)
..-.......+. ....+.+.+.....+.++.. ++...+|...++-..-......-+-
T Consensus 263 ~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~ 342 (394)
T 3b7f_A 263 GVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVK 342 (394)
T ss_dssp TEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCC
T ss_pred CcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEE
Q ss_pred -EEEEEcC-CCCEEEEecCCCcEEE
Q 018784 274 -HCVRFSP-GGESYASGSEDGTIRI 296 (350)
Q Consensus 274 -~~l~~sp-~~~~lasgs~Dg~v~v 296 (350)
..++++| +...|+.++.++.|..
T Consensus 343 ~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 343 RQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp TBSEEECCSSSCCEEEECTTSCEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEE
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.21 E-value=2e+02 Score=27.06 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=35.5
Q ss_pred EEEecccCCCccEEEEEeCC------------CCeeEeeCCCCceeeeccCcc-CCeEEEEECCCCcEEEE
Q 018784 21 DLFYSPITPDGFFLVSASKD------------SSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSAS 78 (350)
Q Consensus 21 ~~~~~~~s~dg~~lasgs~d------------~~v~iw~~~~~~~~~~l~gH~-~~V~~v~~~~~~~~l~s 78 (350)
-|+|+| .|.+++.--.+ ..+.+.+..+++....+.++. ..+..++|+||++.|+.
T Consensus 480 NL~fd~---~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 480 GLGFDK---AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEECT---TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred ceEECC---CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 456665 77766543322 123344566788777777765 45889999999887664
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=26.53 E-value=3e+02 Score=23.41 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=61.6
Q ss_pred CccEEEEEeCCCCeeEeeCCC-------CceeeeccCccCCeEEEEECCCCcEEEEeeCCCeEEEeeCC--CCC------
Q 018784 30 DGFFLVSASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TGD------ 94 (350)
Q Consensus 30 dg~~lasgs~d~~v~iw~~~~-------~~~~~~l~gH~~~V~~v~~~~~~~~l~s~s~Dg~v~vWd~~--~~~------ 94 (350)
+..+++..+.+|.++.-.+.. |.....+... +.+..+........++-.+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 466899999999998766433 2222234443 444444433333444445677887766654 211
Q ss_pred ---eeeeeeccccEeEEEEcCCCCeEEEeeCCCeEEEEECCC
Q 018784 95 ---EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR 133 (350)
Q Consensus 95 ---~~~~~~h~~~V~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 133 (350)
....+.....|.++...+.+..++..+..|.++.-.+..
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 111233445576666666667888999999999887653
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.18 E-value=2e+02 Score=27.04 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=34.2
Q ss_pred EeEEEEcCCCCeEEEeeCC------------CeEEEEECCCCCCCCeeecCCCCcEEEEEEeCCCCcEEEE
Q 018784 105 VRACAFSEDTHLLLTGGFE------------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (350)
Q Consensus 105 V~~~~~~~~~~~l~sg~~d------------~~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 163 (350)
.--|+|+|.|.+++.-..+ ..+.+.+..+++.......+....++.++|++++..+++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568899999876653322 2344445444443333444556678888887655555443
Done!