BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018785
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 170/294 (57%), Gaps = 17/294 (5%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK-EWL 75
++A+ NF + +LG GGFG V+KG + G +VA+KRLK E QG + ++
Sbjct: 34 QVASDNFSNKNILGRGGFGKVYKGRL----------ADGTLVAVKRLKEERXQGGELQFQ 83
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK--GVQPISWPTRVK 133
TEV + H NL++L G+C RLLVY +M GS+ + L + P+ WP R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 134 IAIDVARGLSFLHG-LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
IA+ ARGL++LH D +I+RD+KA+N+LLD F A + DFGLA+ D HV
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 202
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR-GGLAEQTLVEWADP 251
+ GT G+ APEY++TG + K+DV+ +GV+LLEL++G+RA D R + L++W
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 252 FLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLE 305
L++ +++ ++D L G Y +E + L C P RP M +V+ LE
Sbjct: 263 LLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 169/294 (57%), Gaps = 17/294 (5%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK-EWL 75
++A+ NF + +LG GGFG V+KG + G +VA+KRLK E QG + ++
Sbjct: 26 QVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK--GVQPISWPTRVK 133
TEV + H NL++L G+C RLLVY +M GS+ + L + P+ WP R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 134 IAIDVARGLSFLHG-LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
IA+ ARGL++LH D +I+RD+KA+N+LLD F A + DFGLA+ D HV
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 194
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR-GGLAEQTLVEWADP 251
+ G G+ APEY++TG + K+DV+ +GV+LLEL++G+RA D R + L++W
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 252 FLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLE 305
L++ +++ ++D L G Y +E + L C P RP M +V+ LE
Sbjct: 255 LLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 167/291 (57%), Gaps = 20/291 (6%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEV 78
AT NF +L+G G FG V+KG + G VA+KR ES QG +E+ TE+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFETEI 86
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--QPISWPTRVKIAI 136
L RH +LV LIG+C E + +L+Y++M G+L+ HL+ + +SW R++I I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
ARGL +LH +I+RD+K+ N+LLD NF K++DFG+++ G D TH+ + GT
Sbjct: 147 GAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQ--TLVEWADPFLR 254
GY PEY G LT KSDVYSFGVVL E+L R A+ + L + L EWA
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ---SLPREMVNLAEWAVES-H 260
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLE 305
++ ++ +I+D L + + + ++CL + ++RPSM DVL LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 164/283 (57%), Gaps = 15/283 (5%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEGGFG V+KG+++ T A K + + + + LK +++ E+ + + +HEN
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-------QQFDQEIKVMAKCQHEN 91
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G+ S+ D+ LVY +MP GSL + L G P+SW R KIA A G++FLH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH- 150
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
+ + I+RD+K++N+LLD F AK+SDFGLAR T + +RIVGT Y APE +
Sbjct: 151 -ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-R 208
Query: 208 GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRL 267
G +TPKSD+YSFGVVLLE+++G A+DE R Q L++ + + + + +D ++
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 268 GGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
S + QCLH RP + V L+++ S
Sbjct: 266 NDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 163/283 (57%), Gaps = 15/283 (5%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEGGFG V+KG+++ T A K + + + + LK +++ E+ + + +HEN
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-------QQFDQEIKVMAKCQHEN 91
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G+ S+ D+ LVY +MP GSL + L G P+SW R KIA A G++FLH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH- 150
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
+ + I+RD+K++N+LLD F AK+SDFGLAR T + RIVGT Y APE +
Sbjct: 151 -ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-R 208
Query: 208 GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRL 267
G +TPKSD+YSFGVVLLE+++G A+DE R Q L++ + + + + +D ++
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 268 GGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
S + QCLH RP + V L+++ S
Sbjct: 266 NDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 20/291 (6%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEV 78
AT NF +L+G G FG V+KG + G VA+KR ES QG +E+ TE+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFETEI 86
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--QPISWPTRVKIAI 136
L RH +LV LIG+C E + +L+Y++M G+L+ HL+ + +SW R++I I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
ARGL +LH +I+RD+K+ N+LLD NF K++DFG+++ G TH+ + GT
Sbjct: 147 GAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQ--TLVEWADPFLR 254
GY PEY G LT KSDVYSFGVVL E+L R A+ + L + L EWA
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ---SLPREMVNLAEWAVES-H 260
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLE 305
++ ++ +I+D L + + + ++CL + ++RPSM DVL LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 162/283 (57%), Gaps = 15/283 (5%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEGGFG V+KG+++ T A K + + + + LK +++ E+ + + +HEN
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-------QQFDQEIKVMAKCQHEN 85
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G+ S+ D+ LVY +MP GSL + L G P+SW R KIA A G++FLH
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH- 144
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
+ + I+RD+K++N+LLD F AK+SDFGLAR + RIVGT Y APE +
Sbjct: 145 -ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-R 202
Query: 208 GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRL 267
G +TPKSD+YSFGVVLLE+++G A+DE R Q L++ + + + + +D ++
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQLLLDIKEEIEDEEKTIEDYIDKKM 259
Query: 268 GGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
S + QCLH RP + V L+++ S
Sbjct: 260 NDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 158/282 (56%), Gaps = 15/282 (5%)
Query: 30 GEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHENL 89
GEGGFG V+KG+++ T A K + + + + LK +++ E+ + +HENL
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-------QQFDQEIKVXAKCQHENL 83
Query: 90 VKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
V+L+G+ S+ D+ LVY + P GSL + L G P+SW R KIA A G++FLH
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH-- 141
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ + I+RD+K++N+LLD F AK+SDFGLAR +RIVGT Y APE + G
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RG 200
Query: 209 HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLG 268
+TPKSD+YSFGVVLLE+++G A+DE R Q L++ + + + + +D +
Sbjct: 201 EITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQLLLDIKEEIEDEEKTIEDYIDKKXN 257
Query: 269 GQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
S + QCLH RP + V L++ S
Sbjct: 258 DADSTS-VEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK--EWLTEVIYLGQLR 85
+G G FG V + W G VA+K L + F + E+L EV + +LR
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV-QPISWPTRVKIAIDVARGLSF 144
H N+V +G ++ N +V E++ +GSL L + G + + R+ +A DVA+G+++
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
LH + +++RDLK+ N+L+D + K+ DFGL+R S GT + APE
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEV 210
Query: 205 VATGHLTPKSDVYSFGVVLLEL 226
+ KSDVYSFGV+L EL
Sbjct: 211 LRDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 20/203 (9%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK--EWLTEVIYLGQLR 85
+G G FG V + W G VA+K L + F + E+L EV + +LR
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV-QPISWPTRVKIAIDVARGLSF 144
H N+V +G ++ N +V E++ +GSL L + G + + R+ +A DVA+G+++
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR-IVGTRGYAAPE 203
LH + +++R+LK+ N+L+D + K+ DFGL+R +T +S++ GT + APE
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLEL 226
+ KSDVYSFGV+L EL
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 37/325 (11%)
Query: 1 MYLLIAM-SDPSASMI---SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGI 56
+Y AM SDP+ +++ ++I ++G G FG V+KG + ++ P
Sbjct: 20 LYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVP---- 75
Query: 57 VVAIKRLKAESFQGHK-EWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLE 115
VAIK LKA + + ++L E +GQ H N+++L G S+ +++ E+M G+L+
Sbjct: 76 -VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDF 175
L K + S V + +A G+ +L + N ++RDL A N+L++SN K+SDF
Sbjct: 135 KFLREKDGE-FSVLQLVGMLRGIAAGMKYLANM--NYVHRDLAARNILVNSNLVCKVSDF 191
Query: 176 GLAR---DGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRR 231
GL+R D P T +I + APE ++ T SDV+SFG+V+ E+++ G R
Sbjct: 192 GLSRVLEDDPEATYTTSGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 232 ALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDP 291
E L+ +++ + D R+ MD +QC +
Sbjct: 250 PYWE----LSNHEVMK----AINDGFRLPTPMDC----------PSAIYQLMMQCWQQER 291
Query: 292 KNRPSMVDVLTSLEQLHTSKDMPRT 316
RP D+++ L++L + D +T
Sbjct: 292 ARRPKFADIVSILDKLIRAPDSLKT 316
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
LGEG FG V + PT G+G +VA+K LKA++ H+ W E+ L L HE
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 88 NLVKLIGYCSESD--NRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
+++K G C ++ + LV E++P GSL ++L R I + A + G+++L
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYL 150
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPEY 204
H + I+RDL A NVLLD++ K+ DFGLA+ P G + V + APE
Sbjct: 151 HA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
LGEG FG V + PT G+G +VA+K LKA+ H+ W E+ L L HE
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 88 NLVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
+++K G C + + LV E++P GSL ++L R I + A + G+++L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYL 133
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPE 203
H + I+R+L A NVLLD++ K+ DFGLA+ P G + + R G + APE
Sbjct: 134 HA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPE 190
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 31/242 (12%)
Query: 8 SDPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---- 63
S+ S + +A + +G+GGFG V KG + ++ VVAIK L
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK---------SVVAIKSLILGD 56
Query: 64 ---KAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
+ E + +E+ EV + L H N+VKL G +V EF+P G L + L
Sbjct: 57 SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD 114
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDS-----NFNAKLSDF 175
K PI W ++++ +D+A G+ ++ + +++RDL++ N+ L S AK++DF
Sbjct: 115 KA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 176 GLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGH--LTPKSDVYSFGVVLLELLSGRRAL 233
GL++ + H + ++G + APE + T K+D YSF ++L +L+G
Sbjct: 174 GLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
Query: 234 DE 235
DE
Sbjct: 229 DE 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
LGEG FG V + PT G+G +VA+K LKA+ H+ W E+ L L HE
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 88 NLVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
+++K G C + + LV E++P GSL ++L R I + A + G+++L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYL 133
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPE 203
H + I+R+L A NVLLD++ K+ DFGLA+ P G + + R G + APE
Sbjct: 134 HS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPE 190
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGLAR
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
S + + I ++ + LGEG FG VF + + P + ++VA+K LK S
Sbjct: 8 SDACVHHIKRRDIVLKWELGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESA 63
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ------ 124
+++ E L L+H+++V+ G C+E L+V+E+M G L L G
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 123
Query: 125 -------PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
P+ + +A VA G+ +L GL + ++RDL N L+ K+ DFG+
Sbjct: 124 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+RD + D V R + + PE + T +SDV+SFGVVL E+ +
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
S + + I ++ + LGEG FG VF + + P + ++VA+K LK S
Sbjct: 2 SDACVHHIKRRDIVLKWELGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESA 57
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ------ 124
+++ E L L+H+++V+ G C+E L+V+E+M G L L G
Sbjct: 58 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 117
Query: 125 -------PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
P+ + +A VA G+ +L GL + ++RDL N L+ K+ DFG+
Sbjct: 118 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+RD + D V R + + PE + T +SDV+SFGVVL E+ +
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
S + + I ++ + LGEG FG VF + + P + ++VA+K LK S
Sbjct: 31 SDACVHHIKRRDIVLKWELGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESA 86
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ------ 124
+++ E L L+H+++V+ G C+E L+V+E+M G L L G
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 125 -------PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
P+ + +A VA G+ +L GL + ++RDL N L+ K+ DFG+
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+RD + D V R + + PE + T +SDV+SFGVVL E+ +
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 149/313 (47%), Gaps = 49/313 (15%)
Query: 9 DPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA 65
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK LK
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKV 81
Query: 66 -ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ 124
+ + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDA 140
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DG 181
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R D
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 182 PTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALD 234
P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 PEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
Query: 235 EDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
E ++ Q +++ D + R+ MD L C D NR
Sbjct: 251 E----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNR 292
Query: 295 PSMVDVLTSLEQL 307
P +++ L++L
Sbjct: 293 PKFEQIVSILDKL 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEVIY 80
N D ++G G FG V G + P+K I VAIK LK + + +++L E
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
+GQ H N+++L G ++S ++V E+M GSL++ L RK + V + +A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIAS 146
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTR 197
G+ +L D ++RDL A N+L++SN K+SDFGL+R D P T TR
Sbjct: 147 GMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT--------TR 196
Query: 198 G------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWAD 250
G + +PE +A T SDV+S+G+VL E++S G R E ++ Q +++ D
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 252
Query: 251 PFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ R+ MD L C D NRP +++ L++L
Sbjct: 253 ----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 149/313 (47%), Gaps = 49/313 (15%)
Query: 9 DPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK- 64
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK LK
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKV 83
Query: 65 AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ 124
+ + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDA 142
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DG 181
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 PTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALD 234
P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 201 PEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 235 EDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
E ++ Q +++ D + R+ MD L C D NR
Sbjct: 253 E----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNR 294
Query: 295 PSMVDVLTSLEQL 307
P +++ L++L
Sbjct: 295 PKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIY 80
N D ++G G FG V G + P+K I VAIK LK + + +++L E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
+GQ H N+++L G ++S ++V E+M GSL++ L RK + V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIAS 129
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTR 197
G+ +L D ++RDL A N+L++SN K+SDFGL+R D P T TR
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT--------TR 179
Query: 198 G------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWAD 250
G + +PE +A T SDV+S+G+VL E++S G R E ++ Q +++ D
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 235
Query: 251 PFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ R+ MD L C D NRP +++ L++L
Sbjct: 236 ----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 149/313 (47%), Gaps = 49/313 (15%)
Query: 9 DPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK- 64
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK LK
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKV 83
Query: 65 AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ 124
+ + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDA 142
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DG 181
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 PTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALD 234
P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 201 PEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 235 EDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
E ++ Q +++ D + R+ MD L C D NR
Sbjct: 253 E----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNR 294
Query: 295 PSMVDVLTSLEQL 307
P +++ L++L
Sbjct: 295 PKFEQIVSILDKL 307
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 31/242 (12%)
Query: 8 SDPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---- 63
S+ S + +A + +G+GGFG V KG + ++ VVAIK L
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK---------SVVAIKSLILGD 56
Query: 64 ---KAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
+ E + +E+ EV + L H N+VKL G +V EF+P G L + L
Sbjct: 57 SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD 114
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDS-----NFNAKLSDF 175
K PI W ++++ +D+A G+ ++ + +++RDL++ N+ L S AK++DF
Sbjct: 115 KA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 176 GLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGH--LTPKSDVYSFGVVLLELLSGRRAL 233
G ++ + H + ++G + APE + T K+D YSF ++L +L+G
Sbjct: 174 GTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
Query: 234 DE 235
DE
Sbjct: 229 DE 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 31/242 (12%)
Query: 8 SDPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---- 63
S+ S + +A + +G+GGFG V KG + ++ VVAIK L
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK---------SVVAIKSLILGD 56
Query: 64 ---KAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
+ E + +E+ EV + L H N+VKL G +V EF+P G L + L
Sbjct: 57 SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD 114
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDS-----NFNAKLSDF 175
K PI W ++++ +D+A G+ ++ + +++RDL++ N+ L S AK++DF
Sbjct: 115 KA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 176 GLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGH--LTPKSDVYSFGVVLLELLSGRRAL 233
L++ + H + ++G + APE + T K+D YSF ++L +L+G
Sbjct: 174 SLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
Query: 234 DE 235
DE
Sbjct: 229 DE 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
S + I ++ LGEG FG VF + +PTK ++VA+K LK +
Sbjct: 5 SGIHVQHIKRRDIVLKRELGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAA 60
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV------- 123
K++ E L L+HE++VK G C + D ++V+E+M G L L G
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 124 -QP------ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG 176
QP + + IA +A G+ +L + ++RDL N L+ +N K+ DFG
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 177 LARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
++RD + D V + + PE + T +SDV+SFGV+L E+ +
Sbjct: 179 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E+M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL R
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 147
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 96 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 208
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 42 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 154
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 150
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 149
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 7 MSDPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK L
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTL 81
Query: 64 K-AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +++L E +GQ H N+++L G ++S ++V E M GSL++ L RK
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKH 140
Query: 123 VQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--- 179
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLS--DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 180 DGPTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRA 232
D P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 199 DDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 233 LDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPK 292
E ++ Q +++ D + R+ MD L C D
Sbjct: 251 YWE----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRN 292
Query: 293 NRPSMVDVLTSLEQL 307
NRP +++ L++L
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 150
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ FL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 149
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD--GPTGDNTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD D+ H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 17/227 (7%)
Query: 13 SMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK 72
+ + I N LGEG FG VF + P + I+VA+K LK S K
Sbjct: 5 TFVQHIKRHNIVLKRELGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARK 60
Query: 73 EWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI-----S 127
++ E L L+HE++VK G C E D ++V+E+M G L L G + +
Sbjct: 61 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 128 WPTR------VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG 181
PT + IA +A G+ +L + ++RDL N L+ N K+ DFG++RD
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
Query: 182 PTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ D V + + PE + T +SDV+S GVVL E+ +
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 49/313 (15%)
Query: 9 DPSASM---ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK- 64
DP+ ++ ++ N D ++G G FG V G + P+K I VAIK LK
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKV 83
Query: 65 AESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ 124
+ + +++L E +GQ H N+++L G ++S ++V E M GSL++ L RK
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDA 142
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DG 181
+ V + +A G+ +L D ++RDL A N+L++SN K+SDFGL+R D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 182 PTGDNTHVSTRIVGTRG------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALD 234
P T TRG + +PE +A T SDV+S+G+VL E++S G R
Sbjct: 201 PEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 235 EDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
E ++ Q +++ D + R+ MD L C D NR
Sbjct: 253 E----MSNQDVIKAVD----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNR 294
Query: 295 PSMVDVLTSLEQL 307
P +++ L++L
Sbjct: 295 PKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIY 80
N D ++G G FG V G + P+K I VAIK LK + + +++L E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
+GQ H N+++L G ++S ++V E M GSL++ L RK + V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIAS 129
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTR 197
G+ +L D ++RDL A N+L++SN K+SDFGL+R D P T TR
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT--------TR 179
Query: 198 G------YAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWAD 250
G + +PE +A T SDV+S+G+VL E++S G R E ++ Q +++ D
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 235
Query: 251 PFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ R+ MD L C D NRP +++ L++L
Sbjct: 236 ----EGYRLPPPMDC----------PAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 17 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 66 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 125 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 221
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTP 317
+ + QC DP+ RP+ + LE TS + P
Sbjct: 222 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 273
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 15 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 63
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 64 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 123 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 176
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 219
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTP 317
+ + QC DP+ RP+ + LE TS + P
Sbjct: 220 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + ++RHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 33/294 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N ++RDL+A+N+L+ N K++DFGLAR + T + + APE G
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYG 190
Query: 209 HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLG 268
T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 191 RFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYR 233
Query: 269 GQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 275 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEK 323
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 324 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 383 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 436
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 479
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC +P+ RP+ + LE TS + P+ P L
Sbjct: 480 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQXQPGENL 535
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 192 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 240
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 241 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 300 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 353
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 396
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC +P+ RP+ + LE TS + P+ P L
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQXQPGENL 452
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 46 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 100
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------QPISWPTRVKIAI 136
HEN+V L+G C+ L++ E+ G L N L RK +P+ + +
Sbjct: 101 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD N V
Sbjct: 160 QVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+S+G++L E+ S
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KG L + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------QPISWPTRVKIAI 136
HEN+V L+G C+ L++ E+ G L N L RK +P+ + +
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD N V
Sbjct: 168 QVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+S+G++L E+ S
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 21/207 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 19 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 67
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 68 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 127 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 180
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRA 232
G T KSDV+SFG++L EL + R
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRV 207
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 192 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 240
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 241 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 300 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 353
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 396
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC +P+ RP+ + LE TS + P+ P L
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 452
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 148
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAP 202
++RDL A N +LD F K++DFGLARD + V + G + + A
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK-TGAKLPVKWMAL 205
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLS 228
E + T T KSDV+SFGV+L EL++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 26 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KG L + L + + + P V +A +A G++++ +
Sbjct: 75 LVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 230
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQYQPGENL 286
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 193 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEK 241
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 242 LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGL R DN + + + G + + APE
Sbjct: 301 --NYVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQ--GAKFPIKWTAPEAA 354
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 397
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC DP+ RP+ + LE TS + P+ P L
Sbjct: 398 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE-PQXQPGENL 453
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 192 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 240
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 241 LVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 300 --NYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQ--GAKFPIKWTAPEAA 353
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
G T KSDV+SFG++L EL + +G + +V +R VL ++
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVER 396
Query: 266 RLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
+ + QC +P+ RP+ + LE TS + P+ P L
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQXQPGENL 452
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 26 DYLLGEGGFGCVFKGWIDQNTFAPTKPGS-GIVVAIKRLKA-ESFQGHKEWLTEVIYLGQ 83
+ ++G G FG V G + PG I VAIK LK+ + + +++L+E +GQ
Sbjct: 38 EQVIGAGEFGEVCSGHL-------KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 90
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLS 143
H N++ L G ++S +++ EFM GSL++ L R+ + V + +A G+
Sbjct: 91 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTR---G 198
+L D N ++RDL A N+L++SN K+SDFGL+R + T D T+ S +G +
Sbjct: 150 YL--ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA--LGGKIPIR 205
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T SDV+S+G+V+ E++S
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 50/288 (17%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G FG V G N VA+K +K ++ + +L E + QLRH N
Sbjct: 20 IGKGEFGDVMLGDYRGNK-----------VAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 89 LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G E L +V E+M KGSL ++L +G + +K ++DV + +L G
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVA 206
N ++RDL A NVL+ + AK+SDFGL ++ T D + + + APE +
Sbjct: 127 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 178
Query: 207 TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRI---- 262
+ KSDV+SFG++L E+ S R V + L+D V R+
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKDV--VPRVEKGY 222
Query: 263 -MDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHT 309
MD G + E C H+D RPS + + LE + T
Sbjct: 223 KMDAPDGCPPAVYEVMK------NCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK ++ E ++++ E + +L H
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV+EFM G L ++L R + T + + +DV G+++L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A+VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 121 -EASVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 175
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 225
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L + S
Sbjct: 226 PRLASTHVYQIMN-------HCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK ++ E ++++ E + +L H
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV+EFM G L ++L R + T + + +DV G+++L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 118
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 119 -EACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 173
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 223
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L ++ S
Sbjct: 224 PRLASTHVYQIMN-------HCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK ++ E ++++ E + +L H
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV+EFM G L ++L R + T + + +DV G+++L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 123
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 124 -EACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 178
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 228
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L ++ S
Sbjct: 229 PRLASTHVYQIMN-------HCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK +K E +++ E + +L H
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV+EFM G L ++L R + T + + +DV G+++L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 140
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 141 -EACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 195
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 245
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L ++ S
Sbjct: 246 PRLASTHVYQIMN-------HCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 16 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 64
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V +A +A G++++ +
Sbjct: 65 LVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N ++RDL+A+N+L+ N K++DFGLAR + T + + APE G
Sbjct: 124 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYG 180
Query: 209 HLTPKSDVYSFGVVLLELLSGRRA 232
T KSDV+SFG++L EL + R
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRV 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK ++ E ++++ E + +L H
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV+EFM G L ++L R + T + + +DV G+++L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 121 -EACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 175
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 225
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L ++ S
Sbjct: 226 PRLASTHVYQIMN-------HCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 34 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 146
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 55 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 167
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 19 LGGGQFGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 29 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 141
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 149
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 32 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 144
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 56 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 168
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 149/316 (47%), Gaps = 60/316 (18%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT 76
I K + ++G G FG V K W ++ VAIK++++ES + K ++
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIV 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR---VK 133
E+ L ++ H N+VKL G C + LV E+ GSL N L G +P+ + T +
Sbjct: 52 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMS 107
Query: 134 IAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVST 191
+ ++G+++LH + +I+RDLK N+LL + K+ DFG A D TH+ T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-T 162
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA-- 249
G+ + APE + + K DV+S+G++L E+++ R+ DE GG A + + WA
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI-GGPAFRIM--WAVH 219
Query: 250 ----DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSM---VDVLT 302
P +++ + + + TR C DP RPSM V ++T
Sbjct: 220 NGTRPPLIKNLPKPIESLMTR-------------------CWSKDPSQRPSMEEIVKIMT 260
Query: 303 SLEQLHTSKDMPRTPP 318
L + D P P
Sbjct: 261 HLMRYFPGADEPLQYP 276
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G FG V G N VA+K +K ++ + +L E + QLRH N
Sbjct: 29 IGKGEFGDVMLGDYRGNK-----------VAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 89 LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G E L +V E+M KGSL ++L +G + +K ++DV + +L G
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVA 206
N ++RDL A NVL+ + AK+SDFGL ++ T D + + + APE +
Sbjct: 136 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 187
Query: 207 TGHLTPKSDVYSFGVVLLELLSGRR 231
+ KSDV+SFG++L E+ S R
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G FG V G N VA+K +K ++ + +L E + QLRH N
Sbjct: 14 IGKGEFGDVMLGDYRGNK-----------VAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 89 LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G E L +V E+M KGSL ++L +G + +K ++DV + +L G
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVA 206
N ++RDL A NVL+ + AK+SDFGL ++ T D + + + APE +
Sbjct: 121 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 172
Query: 207 TGHLTPKSDVYSFGVVLLELLSGRRA 232
+ KSDV+SFG++L E+ S R
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G FG V G N VA+K +K ++ + +L E + QLRH N
Sbjct: 201 IGKGEFGDVMLGDYRGNK-----------VAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 89 LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L+G E L +V E+M KGSL ++L +G + +K ++DV + +L G
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVA 206
N ++RDL A NVL+ + AK+SDFGL ++ T D + + + APE +
Sbjct: 308 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 359
Query: 207 TGHLTPKSDVYSFGVVLLELLSGRR 231
+ KSDV+SFG++L E+ S R
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWLTEVIYLGQLRHE 87
LGEG FG V + PT G+G +VA+K LK Q W E+ L L HE
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 88 NLVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
++VK G C + + LV E++P GSL ++L R V + A + G+++L
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV---GLAQLLLFAQQICEGMAYL 128
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPE 203
H + I+R L A NVLLD++ K+ DFGLA+ P G + + R G + APE
Sbjct: 129 HA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPE 185
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 149
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 147
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD--NTHVSTRIVGTRGYAAPE 203
++RDL A N +LD F K++DFGLARD + + H T + A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ T T KSDV+SFGV+L EL++
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRH 86
++G G FGCV+ G + N G I A+K L + G ++LTE I + H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 87 ENLVKLIGYCSESDNR-LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N++ L+G C S+ L+V +M G L N + + P + + + VA+G+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 148
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAP 202
++RDL A N +LD F K++DFGLARD + V + G + + A
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK-TGAKLPVKWMAL 205
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLS 228
E + T T KSDV+SFGV+L EL++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 60/316 (18%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT 76
I K + ++G G FG V K W ++ VAIK++++ES + K ++
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIV 50
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR---VK 133
E+ L ++ H N+VKL G C + LV E+ GSL N L G +P+ + T +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMS 106
Query: 134 IAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVST 191
+ ++G+++LH + +I+RDLK N+LL + K+ DFG A D TH++
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHMTN 162
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA-- 249
G+ + APE + + K DV+S+G++L E+++ R+ DE GG A + + WA
Sbjct: 163 N-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI-GGPAFRIM--WAVH 218
Query: 250 ----DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSM---VDVLT 302
P +++ + + + TR C DP RPSM V ++T
Sbjct: 219 NGTRPPLIKNLPKPIESLMTR-------------------CWSKDPSQRPSMEEIVKIMT 259
Query: 303 SLEQLHTSKDMPRTPP 318
L + D P P
Sbjct: 260 HLMRYFPGADEPLQYP 275
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWLTEVIYLGQLRHE 87
LGEG FG V + PT G+G +VA+K LK Q W E+ L L HE
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 88 NLVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
++VK G C + + LV E++P GSL ++L R V + A + G+++L
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV---GLAQLLLFAQQICEGMAYL 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPE 203
H + I+R L A NVLLD++ K+ DFGLA+ P G + + R G + APE
Sbjct: 128 HA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 21/207 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 23 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V ++ +A G++++ +
Sbjct: 72 LVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + + G + + APE
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIKWTAPEAA 184
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRA 232
G T KSDV+SFG++L EL + R
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 122 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 224
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 225 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 278
Query: 304 LEQ 306
+++
Sbjct: 279 IKE 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
LGEG FG V + + P +G VA+K LK ES H + E+ L L HE
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 88 NLVKLIGYCSES--DNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N+VK G C+E + L+ EF+P GSL+ +L K I+ ++K A+ + +G+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG-DNTHVSTRIVGTRGYAAPEY 204
++RDL A NVL++S K+ DFGL + T + V + APE
Sbjct: 143 GS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
LGEG FG V + + P +G VA+K LK ES H + E+ L L HE
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 88 NLVKLIGYCSES--DNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
N+VK G C+E + L+ EF+P GSL+ +L K I+ ++K A+ + +G+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG-DNTHVSTRIVGTRGYAAPEY 204
++RDL A NVL++S K+ DFGL + T + V + APE
Sbjct: 131 GS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ SDV+SFGV L ELL+
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 131 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 233
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 234 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 304 LEQ 306
+++
Sbjct: 288 IKE 290
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 15/220 (6%)
Query: 9 DPSASMISK--IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
DPS+ K + + + LG G +G V++G + + + VA+K LK +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------LTVAVKTLKED 54
Query: 67 SFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ + +E+L E + +++H NLV+L+G C+ ++ EFM G+L ++L Q +
Sbjct: 55 TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
S + +A ++ + +L N I+RDL A N L+ N K++DFGL+R TGD
Sbjct: 114 SAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDT 170
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ APE +A + KSDV++FGV+L E+
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+G G FG V G W++++ VAIK ++ E ++++ E + +L H
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C E LV EFM G L ++L R + T + + +DV G+++L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 121
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
+A VI+RDL A N L+ N K+SDFG+ R D+ + S+ GT+ +A+PE
Sbjct: 122 -EACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSS--TGTKFPVKWASPEV 176
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMD 264
+ + KSDV+SFGV++ E+ S + E+R + D R+
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYK 226
Query: 265 TRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
RL + + C P++RP+ +L L ++ S
Sbjct: 227 PRLASTHVYQIMN-------HCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 21/207 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+ G + T VAIK LK + + +L E + +LRHE
Sbjct: 23 LGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEK 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + + P V ++ +A G++++ +
Sbjct: 72 LVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N ++RDL+A+N+L+ N K++DFGLAR DN + + G + + APE
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQ--GAKFPIKWTAPEAA 184
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRA 232
G T KSDV+SFG++L EL + R
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK----------GVQPISWPTR--V 132
HEN+V L+G C+ L++ E+ G L N L RK + + TR +
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
+ VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD N V
Sbjct: 168 HFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+S+G++L E+ S
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 130 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 232
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 233 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 304 LEQ 306
+++
Sbjct: 287 IKE 289
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 15/220 (6%)
Query: 9 DPSASMISK--IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
DPS+ K + + + LG G +G V++G + VA+K LK +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEG---------VWKKYSLTVAVKTLKED 54
Query: 67 SFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ + +E+L E + +++H NLV+L+G C+ ++ EFM G+L ++L Q +
Sbjct: 55 TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 113
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
+ + +A ++ + +L N I+RDL A N L+ N K++DFGL+R TGD
Sbjct: 114 NAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDT 170
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ APE +A + KSDV++FGV+L E+
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 67
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 128 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 186 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 230
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 231 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 284
Query: 304 LEQ 306
+++
Sbjct: 285 IKE 287
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK----------GVQPISWPTR--V 132
HEN+V L+G C+ L++ E+ G L N L RK + + TR +
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
+ VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD N V
Sbjct: 168 HFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+S+G++L E+ S
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 15/220 (6%)
Query: 9 DPSASMISK--IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
DPS+ K + + + LG G +G V++G + + + VA+K LK +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------LTVAVKTLKED 54
Query: 67 SFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ + +E+L E + +++H NLV+L+G C+ ++ EFM G+L ++L Q +
Sbjct: 55 TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
+ + +A ++ + +L N I+RDL A N L+ N K++DFGL+R TGD
Sbjct: 114 NAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDT 170
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ APE +A + KSDV++FGV+L E+
Sbjct: 171 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 137 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 239
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 240 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 304 LEQ 306
+++
Sbjct: 294 IKE 296
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R + P S
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 137 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 239
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 240 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 304 LEQ 306
+++
Sbjct: 294 IKE 296
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 124 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 226
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 227 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 280
Query: 304 LEQ 306
+++
Sbjct: 281 IKE 283
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 130 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 232
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 233 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 304 LEQ 306
+++
Sbjct: 287 IKE 289
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 15/220 (6%)
Query: 9 DPSASMISK--IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
DPS+ K + + + LG G +G V++G + VA+K LK +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEG---------VWKKYSLTVAVKTLKED 54
Query: 67 SFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ + +E+L E + +++H NLV+L+G C+ ++ EFM G+L ++L Q +
Sbjct: 55 TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
+ + +A ++ + +L N I+RDL A N L+ N K++DFGL+R TGD
Sbjct: 114 NAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDT 170
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ APE +A + KSDV++FGV+L E+
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 131 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 233
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 234 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 304 LEQ 306
+++
Sbjct: 288 IKE 290
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 19/210 (9%)
Query: 26 DYLLGEGGFGCVFKGWIDQNTFAPTKPGS-GIVVAIKRLKA-ESFQGHKEWLTEVIYLGQ 83
+ ++G G FG V G + PG I VAIK LK+ + + +++L+E +GQ
Sbjct: 12 EQVIGAGEFGEVCSGHLKL-------PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLS 143
H N++ L G ++S +++ EFM GSL++ L R+ + V + +A G+
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTR---G 198
+L D N ++R L A N+L++SN K+SDFGL+R + T D T+ S +G +
Sbjct: 124 YL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA--LGGKIPIR 179
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T SDV+S+G+V+ E++S
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL-TEVIYLGQL-R 85
+LG G FG V ++ + +K G I VA+K LK ++ +E L +E+ + QL
Sbjct: 52 VLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK---------------------GVQ 124
HEN+V L+G C+ S L++E+ G L N+L K +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG 184
+++ + A VA+G+ FL + ++RDL A NVL+ K+ DFGLARD +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 185 DNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
N V + APE + G T KSDV+S+G++L E+ S
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 66
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R + P S
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 127 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 229
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 230 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 283
Query: 304 LEQ 306
+++
Sbjct: 284 IKE 286
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 15/220 (6%)
Query: 9 DPSASMISK--IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
DPS+ K + + + LG G +G V++G + + + VA+K LK +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------LTVAVKTLKED 54
Query: 67 SFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ + +E+L E + +++H NLV+L+G C+ ++ EFM G+L ++L Q +
Sbjct: 55 TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
+ + +A ++ + +L N I+RDL A N L+ N K++DFGL+R TGD
Sbjct: 114 NAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDT 170
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ APE +A + KSDV++FGV+L E+
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G + NT VAIK LK + + +L E + +L+H+
Sbjct: 17 LGNGQFGEVWMGTWNGNT----------KVAIKTLKPGTM-SPESFLEEAQIMKKLKHDK 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L SE + +V E+M KGSL + L + + P V +A VA G++++ +
Sbjct: 66 LVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL+++N+L+ + K++DFGLAR + T + + APE G
Sbjct: 125 --NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYG 181
Query: 209 HLTPKSDVYSFGVVLLELLSGRRA 232
T KSDV+SFG++L EL++ R
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRV 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 192 KFSIKSDVWAFGVLLWEI 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 98
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N ++ +F K+ DFG+ RD D
Sbjct: 159 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 261
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 262 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 315
Query: 304 LEQ 306
+++
Sbjct: 316 IKE 318
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK---GVQPISWPTR---------- 131
HEN+V L+G C+ L++ E+ G L N L RK G++ P+
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 132 -VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
+ + VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD N V
Sbjct: 168 LLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 191 TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+S+G++L E+ S
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 240
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +PK RP+ ++++ L + LH S
Sbjct: 241 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 293
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + VA+K LK ++ + +E+L E + +++H N
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 201 KFSIKSDVWAFGVLLWEI 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD D + + +
Sbjct: 138 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 237
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +PK RP+ ++++ L + LH S
Sbjct: 238 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 290
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 17/207 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRH 86
++G G FG V +G + AP K S VAIK LK + + +E+L+E +GQ H
Sbjct: 21 VIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
N+++L G + S +++ EFM G+L++ L R + V + +A G+ +L
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTR---GYAA 201
+ + ++RDL A N+L++SN K+SDFGL+R + + D T+ S+ +G + + A
Sbjct: 134 --EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS--LGGKIPIRWTA 189
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELLS 228
PE +A T SD +S+G+V+ E++S
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 26 DYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQL 84
+ ++G G FG V +G + AP K S VAIK LK + + +E+L+E +GQ
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
H N+++L G + S +++ EFM G+L++ L R + V + +A G+ +
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRY 133
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAA 201
L + + ++RDL A N+L++SN K+SDFGL+R + T +G + + A
Sbjct: 134 LA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELLS 228
PE +A T SD +S+G+V+ E++S
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 40/303 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWL 75
++A + LG+G FG V++G K VAIK + +A S + E+L
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAK----GVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQ------PIS 127
E + + ++V+L+G S+ L++ E M +G L+++L R ++ P S
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+++A ++A G+++L+ ++RDL A N + +F K+ DFG+ RD D
Sbjct: 124 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
+ + + +PE + G T SDV+SFGVVL E+ + LAEQ
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQ---- 226
Query: 248 WADPFL-RDSRRVLR-IMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTS 303
P+ + +VLR +M+ GG K + L C +PK RPS +++++S
Sbjct: 227 ---PYQGLSNEQVLRFVME---GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 280
Query: 304 LEQ 306
+++
Sbjct: 281 IKE 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK + + +L E + L+H+
Sbjct: 21 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTM-SVQAFLEEANLMKTLQHDK 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L + + ++ E+M KGSL + L + P + + +A G++++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE-- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N I+RDL+A+NVL+ + K++DFGLAR DN + + G + + APE +
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTARE--GAKFPIKWTAPEAI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLS 228
G T KSDV+SFG++L E+++
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK + + +L E + L+H+
Sbjct: 20 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTM-SVQAFLEEANLMKTLQHDK 68
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ EFM KGSL + L + P + + +A G++++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N I+RDL+A+NVL+ + K++DFGLAR DN + + G + + APE +
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTARE--GAKFPIKWTAPEAI 182
Query: 206 ATGHLTPKSDVYSFGVVLLELLS 228
G T KS+V+SFG++L E+++
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 30/279 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 228 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q +S + +A ++ + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+R+L A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 209 HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLG 268
+ KSDV++FGV+L E+ + G++ + D +V +++
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT---------YGMSPYPGI--------DLSQVYELLEKDYR 437
Query: 269 GQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ + + C +P +RPS ++ + E +
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V+ G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 40 LGGGQYGEVYVGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ +V E+MP G+L ++L + ++ + +A ++ + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+RDL A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 207 TFSIKSDVWAFGVLLWEI 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ F K + + VA+K LK+ + KE L + +LGQ
Sbjct: 39 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 93
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------------------- 123
HEN+V L+G C+ L++ E+ G L N L RK
Sbjct: 94 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 124 QPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+P+ + + VA+G++FL N I+RD+ A NVLL + AK+ DFGLARD
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 184 GDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
N V + APE + T +SDV+S+G++L E+ S
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRH 86
++G G FG V G + P K I VAIK LKA + + +++L+E +GQ H
Sbjct: 36 VIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 89
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
N++ L G ++ +++ E+M GSL+ L RK + V + + G+ +L
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTRGYAAPE 203
D + ++RDL A N+L++SN K+SDFG++R D P T +I + APE
Sbjct: 149 --DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 204
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+A T SDV+S+G+V+ E++S
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ EF+P GSL +L +K + I ++ + +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 135 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRH 86
++G G FG V G + P K I VAIK LKA + + +++L+E +GQ H
Sbjct: 15 VIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 68
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
N++ L G ++ +++ E+M GSL+ L RK + V + + G+ +L
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTRGYAAPE 203
D + ++RDL A N+L++SN K+SDFG++R D P T +I + APE
Sbjct: 128 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 183
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+A T SDV+S+G+V+ E++S
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 35/218 (16%)
Query: 28 LLGEGGFGCVFKG-WIDQNTF---APTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQ 83
++G GGFG V++ WI A P I I+ ++ E+
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAK-----------LFAM 62
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLS 143
L+H N++ L G C + N LV EF G L L K + P V A+ +ARG++
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGMN 119
Query: 144 FLHG-LDANVIYRDLKASNVLLD--------SNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+LH +I+RDLK+SN+L+ SN K++DFGLAR+ H +T++
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE------WHRTTKMS 173
Query: 195 GTRGYA--APEYVATGHLTPKSDVYSFGVVLLELLSGR 230
YA APE + + SDV+S+GV+L ELL+G
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 240
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +PK RP+ ++++ L + LH S
Sbjct: 241 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 293
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 32 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S + +V ++ SL +HL + + IA ARG+ +LH
Sbjct: 82 ILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA- 138
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 27/211 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRH 86
++G G FG V G + P K I VAIK LKA + + +++L+E +GQ H
Sbjct: 21 VIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 74
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
N++ L G ++ +++ E+M GSL+ L RK + V + + G+ +L
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTRG----- 198
D + ++RDL A N+L++SN K+SDFG++R D P T TRG
Sbjct: 134 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT--------TRGGKIPI 183
Query: 199 -YAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE +A T SDV+S+G+V+ E++S
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 133/311 (42%), Gaps = 56/311 (18%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+LG+G FG K T +G V+ +K L + + +L EV + L H
Sbjct: 17 VLGKGCFGQAIK---------VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHP 67
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
N++K IG + + E++ G+L + + W RV A D+A G+++LH
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLAR------DGPTG-------DNTHVSTRIV 194
+ N+I+RDL + N L+ N N ++DFGLAR P G D T +V
Sbjct: 127 M--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VV 183
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
G + APE + K DV+SFG+VL E++ GR D D
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPD------------------ 224
Query: 255 DSRRVLRIMDTRLG-----GQYSKKEA-QXXXXXXLQCLHMDPKNRPSMVDVLTSLE--Q 306
+ R MD L +Y ++C +DP+ RPS V + LE +
Sbjct: 225 ---YLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
Query: 307 LHTSKDMPRTP 317
+H + +P P
Sbjct: 282 MHLAGHLPLGP 292
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 240
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +P RP+ ++++ L + LH S
Sbjct: 241 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 293
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD D + + +
Sbjct: 140 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 239
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +PK RP+ ++++ L + LH S
Sbjct: 240 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 292
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 131 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 132 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 130 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 136 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 132 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 138 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 163 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 132 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 137 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 139 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 135 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 32 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA ARG+ +LH
Sbjct: 82 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA- 138
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 267 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+R+L A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 434 KFSIKSDVWAFGVLLWEI 451
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 50/317 (15%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH--KEWL 75
I + F +LG+G FG V + + Q + GS + VA+K LKA+ +E+L
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 76 TEVIYLGQLRHENLVKLIGYC--SESDNRL----LVYEFMPKGSLENHLF--RKGVQPIS 127
E + + H ++ KL+G S + RL ++ FM G L L R G P +
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 128 WP--TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD 185
P T V+ +D+A G+ +L N I+RDL A N +L + ++DFGL+R +GD
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 186 NTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
+ A E +A T SDV++FGV + E+++ G
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT---------RGQTPYAG 242
Query: 246 VEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXX---XLQCLHMDPKNRPSMV---- 298
+E A+ I + +GG K+ + QC DPK RPS
Sbjct: 243 IENAE-----------IYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291
Query: 299 ---DVLTSLEQLHTSKD 312
++L L L TS+D
Sbjct: 292 ELENILGHLSVLSTSQD 308
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G +G V++G + + + VA+K LK ++ + +E+L E + +++H N
Sbjct: 225 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L+G C+ ++ EFM G+L ++L Q ++ + +A ++ + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
N I+R+L A N L+ N K++DFGL+R TGD + APE +A
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 209 HLTPKSDVYSFGVVLLEL 226
+ KSDV++FGV+L E+
Sbjct: 392 KFSIKSDVWAFGVLLWEI 409
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE--SFQGHKEWLTEVIYLGQLR 85
+LGEG FG V +G + Q + G+ + VA+K +K + S + +E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 86 HENLVKLIGYCSESDNR-----LLVYEFMPKGSLENHLF----RKGVQPISWPTRVKIAI 136
H N+++L+G C E ++ +++ FM G L +L G + I T +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
D+A G+ +L + N ++RDL A N +L + ++DFGL++ +GD
Sbjct: 155 DIALGMEYLS--NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLEL 226
+ A E +A T KSDV++FGV + E+
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 56/291 (19%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VA+K +K E E+ E + +L H
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIK-EGSMSEDEFFQEAQTMMKLSHP 63
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVARGLSFL 145
LVK G CS+ +V E++ G L N+L KG++P +++ DV G++FL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL 120
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAP 202
I+RDL A N L+D + K+SDFG+ R D+ +VS+ VGT+ ++AP
Sbjct: 121 ES--HQFIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSS--VGTKFPVKWSAP 174
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWADPFLRDSR--RV 259
E + KSDV++FG+++ E+ S G+ D L ++ L+ S+ R+
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD----------LYTNSEVVLKVSQGHRL 224
Query: 260 LR---IMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
R DT YS C H P+ RP+ +L+S+E L
Sbjct: 225 YRPHLASDTIYQIMYS-------------CWHELPEKRPTFQQLLSSIEPL 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L +K + I ++ + +G+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+R+L N+L+++ K+ DFGL + P D + + G + APE
Sbjct: 133 T--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 56 IVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
+ VAIK LKA + + +++L+E +GQ H N+++L G + ++V E+M GSL
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 115 ENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSD 174
+ L R + V + V G+ +L D ++RDL A NVL+DSN K+SD
Sbjct: 138 DTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 175 FGLAR---DGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
FGL+R D P T +I + APE +A + SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 16 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 64
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 65 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 121
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+RDL+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 177
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 75
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 132
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+RDL+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 188
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 31 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 79
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 80 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 136
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+RDL+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 192
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 26 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 74
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 75 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 131
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+RDL+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKA-----ESFQGHKEWLTEVIYLG 82
+G G FG V+KG W VA+K LK E FQ + EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKILKVVDPTPEQFQAFR---NEVAVLR 87
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+ RH N++ +GY ++ DN +V ++ SL HL + + + IA A+G+
Sbjct: 88 KTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGM 145
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
+LH N+I+RD+K++N+ L K+ DFGLA + + G+ + AP
Sbjct: 146 DYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 203 EYVATGHLTP---KSDVYSFGVVLLELLSG 229
E + P +SDVYS+G+VL EL++G
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+RDL+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 182
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 56 IVVAIKRLKA-ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
+ VAIK LKA + + +++L+E +GQ H N+++L G + ++V E+M GSL
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 115 ENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSD 174
+ L R + V + V G+ +L D ++RDL A NVL+DSN K+SD
Sbjct: 138 DTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 175 FGLAR---DGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
FGL+R D P T +I + APE +A + SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P + +G VVA+K+L+ + + +++ E+ L L+H+N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 89 LVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G C + R L+ E++P GSL ++L + + I ++ + +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
I+RDL N+L+++ K+ DFGL + P D + G + APE
Sbjct: 135 T--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 12 ASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH 71
+ MI KI + + LG GG V ++ ++T K + R K E+
Sbjct: 2 SHMIGKIINERYKIVDKLGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETL--- 55
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR 131
K + EV QL H+N+V +I E D LV E++ +L ++ G P+S T
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTA 113
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ + G+ H D +++RD+K N+L+DSN K+ DFG+A+ T +
Sbjct: 114 INFTNQILDGIK--HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TN 170
Query: 192 RIVGTRGYAAPEYVATGHLTPK-SDVYSFGVVLLELLSGR 230
++GT Y +PE A G T + +D+YS G+VL E+L G
Sbjct: 171 HVLGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 29 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 77
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 78 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 134
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 193
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 75
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 132
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 191
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGR 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 185
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 23 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 72 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 128
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 187
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 20 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA ARG+ +LH
Sbjct: 70 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 127 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 30 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 78
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 79 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 135
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 194
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 22 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 71 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 186
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 25/208 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ +++T VA+K +K S + +L E + L+H+
Sbjct: 23 LGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANVMKTLQHDK 71
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK--GVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ + ++ EFM KGSL + L QP+ P + + +A G++F+
Sbjct: 72 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE 128
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPE 203
N I+RDL+A+N+L+ ++ K++DFGLAR DN + + G + + APE
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTARE--GAKFPIKWTAPE 182
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRR 231
+ G T KSDV+SFG++L+E+++ R
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 185
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGS-GIVVAIKRLK-AESFQGHKEWLTEVIYLGQLR 85
++G G FG V G + PG + VAIK LK + + +++L E +GQ
Sbjct: 50 VIGAGEFGEVCSGRL-------KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD 102
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+V L G + ++V EFM G+L+ L RK + V + +A G+ +L
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL-RKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTRGYAAP 202
D ++RDL A N+L++SN K+SDFGL+R D P T +I + AP
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAP 217
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLS 228
E + T SDV+S+G+V+ E++S
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 36 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 86 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 142
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 143 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 76
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + +L H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 135
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 250
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 290
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 291 PNFAIILERIEYCTQDPDVINTALPIE 317
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ +++T VA+K +K S + +L E + L+H+
Sbjct: 196 LGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANVMKTLQHDK 244
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ + ++ EFM KGSL + L P + + +A G++F+
Sbjct: 245 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N I+RDL+A+N+L+ ++ K++DFGLAR DN + + G + + APE +
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTARE--GAKFPIKWTAPEAI 357
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L+E+++ R
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 90
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + +L H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 149
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 264
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 304
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 305 PNFAIILERIEYCTQDPDVINTALPIE 331
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 16 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 66 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 122
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 44 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY ++ +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 94 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 150
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 31 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 142 S--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 33 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 144 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++RDL A N ++ +F K+ DFG+ RD + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 240
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +PK RP+ ++++ L + LH S
Sbjct: 241 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 293
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 31 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 142 S--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 29 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 140 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 31 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 142 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGS-GIVVAIKRLKA-ESFQGHKEWLTEVIYLGQLR 85
++G G FG V G + PG + VAIK LK + + +++L E +GQ
Sbjct: 29 VIGAGEFGEVCSGRLKL-------PGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD 81
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++ L G ++S ++V E+M GSL+ L + Q + V + ++ G+ +L
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYL 140
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR---DGPTGDNTHVSTRIVGTRGYAAP 202
D ++RDL A N+L++SN K+SDFGL+R D P T +I + AP
Sbjct: 141 S--DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAP 196
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLS 228
E +A T SDV+S+G+V+ E++S
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 29 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 140 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 36 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 147 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 31 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 142 S--ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 37 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 148 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 28 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 139 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 39 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 150 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 31 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 142 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 51 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 162 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 21/206 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 17 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 66 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 122
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
+ N I+R+L+A+N+L+ + K++DFGLAR DN + + G + + APE +
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTARE--GAKFPIKWTAPEAI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L E+++ R
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 35/303 (11%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ 69
P S IA ++ + +LGEG FG V++G G I VA+K K +
Sbjct: 13 PRGSPQYGIAREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTL 66
Query: 70 GHKE-WLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISW 128
+KE +++E + + L H ++VKLIG E +++ E P G L H + +
Sbjct: 67 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKV 124
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
T V ++ + + +++L + N ++RD+ N+L+ S KL DFGL+R D
Sbjct: 125 LTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 182
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVE 247
S + + + +PE + T SDV+ F V + E+LS G++
Sbjct: 183 ASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF-------------- 227
Query: 248 WADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSLE 305
F +++ V+ +++ G + K + L +C DP +RP +++ SL
Sbjct: 228 ----FWLENKDVIGVLEK--GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 281
Query: 306 QLH 308
++
Sbjct: 282 DVY 284
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVYSEQ 90
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 149
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 264
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 304
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 305 PNFAIILERIEYCTQDPDVINTALPIE 331
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++R+L A N ++ +F K+ DFG+ RD D + + +
Sbjct: 141 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 240
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +P RP+ ++++ L + LH S
Sbjct: 241 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 293
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 35/295 (11%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLT 76
IA ++ + +LGEG FG V++G G I VA+K K + +KE +++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 58
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E + + L H ++VKLIG E +++ E P G L H + + T V ++
Sbjct: 59 EAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKVLTLVLYSL 116
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ + +++L + N ++RD+ N+L+ S KL DFGL+R D S +
Sbjct: 117 QICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWADPFLRD 255
+ + +PE + T SDV+ F V + E+LS G++ F +
Sbjct: 175 K-WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF------------------FWLE 215
Query: 256 SRRVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSLEQLH 308
++ V+ +++ G + K + L +C DP +RP +++ SL ++
Sbjct: 216 NKDVIGVLEK--GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 268
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLGQLRHE 87
LG+G FG V++G N K + VA+K + ++ S + E+L E +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------RKGVQPISWPTRVKIAIDVA 139
++V+L+G S+ L+V E M G L+++L G P + +++A ++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
G+++L+ ++R+L A N ++ +F K+ DFG+ RD D + + +
Sbjct: 142 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF--LRDSR 257
APE + G T SD++SFGVVL E+ S LAEQ P+ L + +
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQ-------PYQGLSNEQ 241
Query: 258 RVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSL-EQLHTS 310
+ +MD GG + + L C +P RP+ ++++ L + LH S
Sbjct: 242 VLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 294
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ + K + + VA+K LK + +E L + YLG
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI---------- 134
H N+V L+G C+ L++ E+ G L N L RK I T I
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 135 ------AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
+ VA+G++FL N I+RDL A N+LL K+ DFGLARD N
Sbjct: 161 EDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
V + APE + T +SDV+S+G+ L EL S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L RHE
Sbjct: 33 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 144 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 76
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 135
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 250
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 290
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 291 PNFAIILERIEYCTQDPDVINTALPIE 317
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 92
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 151
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 209
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 210 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 266
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 267 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 306
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 307 PNFAIILERIEYCTQDPDVINTALPIE 333
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 35/295 (11%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLT 76
IA ++ + +LGEG FG V++G G I VA+K K + +KE +++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 62
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E + + L H ++VKLIG E +++ E P G L H + + T V ++
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLERNKNSLKVLTLVLYSL 120
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ + +++L + N ++RD+ N+L+ S KL DFGL+R D S +
Sbjct: 121 QICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLS-GRRALDEDRGGLAEQTLVEWADPFLRD 255
+ + +PE + T SDV+ F V + E+LS G++ F +
Sbjct: 179 K-WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF------------------FWLE 219
Query: 256 SRRVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLTSLEQLH 308
++ V+ +++ G + K + L +C DP +RP +++ SL ++
Sbjct: 220 NKDVIGVLEK--GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 82
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 141
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 199
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 200 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 256
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 257 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 296
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 297 PNFAIILERIEYCTQDPDVINTALPIE 323
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 75
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 134
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 249
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 250 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 289
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 290 PNFAIILERIEYCTQDPDVINTALPIE 316
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 75
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP-SQP 134
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 249
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 250 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 289
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 290 PNFAIILERIEYCTQDPDVINTALPIE 316
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 67
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 126
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 185 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 241
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 242 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 281
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 282 PNFAIILERIEYCTQDPDVINTALPIE 308
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 16 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S + +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 66 ILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 122
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 102
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 161
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 220 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 276
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 277 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 316
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 317 PNFAIILERIEYCTQDPDVINTALPIE 343
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ + K + + VA+K LK + +E L + YLG
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI---------- 134
H N+V L+G C+ L++ E+ G L N L RK I T I
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 135 ------AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
+ VA+G++FL N I+RDL A N+LL K+ DFGLARD N
Sbjct: 145 EDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
V + APE + T +SDV+S+G+ L EL S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ + K + + VA+K LK + +E L + YLG
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI---------- 134
H N+V L+G C+ L++ E+ G L N L RK I T I
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 135 ------AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
+ VA+G++FL N I+RDL A N+LL K+ DFGLARD N
Sbjct: 163 EDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
V + APE + T +SDV+S+G+ L EL S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 90
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP-SQP 149
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 264
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 265 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 304
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 305 PNFAIILERIEYCTQDPDVINTALPIE 331
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 31/206 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V+ +++T VA+K +K S + +L E + L+H+
Sbjct: 190 LGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANVMKTLQHDK 238
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ + ++ EFM KGSL + L P + + +A G++F+
Sbjct: 239 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 295
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEYV 205
N I+RDL+A+N+L+ ++ K++DFGLAR VG + + APE +
Sbjct: 296 QRNYIHRDLRAANILVSASLVCKIADFGLAR--------------VGAKFPIKWTAPEAI 341
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRR 231
G T KSDV+SFG++L+E+++ R
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ + K + + VA+K LK + +E L + YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI---------- 134
H N+V L+G C+ L++ E+ G L N L RK I T I
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 135 ------AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
+ VA+G++FL N I+RDL A N+LL K+ DFGLARD N
Sbjct: 168 EDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
V + APE + T +SDV+S+G+ L EL S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 93
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 152
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 210
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 211 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 267
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 268 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 307
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 308 PNFAIILERIEYCTQDPDVINTALPIE 334
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 116
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 175
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+ARD
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 290
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 291 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 330
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 331 PNFAIILERIEYCTQDPDVINTALPIE 357
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAI+++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIRKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L RHE
Sbjct: 33 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 144 S--ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 16 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 66 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 122
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 43 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 93 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 149
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 150 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 18 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 67
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 68 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 124
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 125 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 21 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 71 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 21 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 71 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V+KG K + V + + A + Q + + EV L + RH N
Sbjct: 44 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++ +GY S +V ++ SL +HL + + IA A+G+ +LH
Sbjct: 94 ILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA- 150
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
++I+RDLK++N+ L + K+ DFGLA +H ++ G+ + APE +
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 209 HLTP---KSDVYSFGVVLLELLSGR 230
P +SDVY+FG+VL EL++G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 60
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 118
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 119 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 177 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 58
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 116
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 117 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 175 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 118 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 61
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 62 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 119
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 120 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 178 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 58
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIG 116
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 117 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 175 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 14 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 67
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 68 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 125
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 126 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 183
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 184 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 204 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 60
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 118
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 119 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 177 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 35 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T V TR Y APE +
Sbjct: 146 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 36 IGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + + ++ + +E L++ Q +S + RGL ++H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+LL++ + K+ DFGLAR P D+T V TR Y APE +
Sbjct: 147 S--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 60
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 118
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 119 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 177 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 118 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 15/203 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G G V+ G+ + +T VA+K LK S +L E + QL+H+
Sbjct: 21 LGAGQAGEVWMGYYNGHT----------KVAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV+L ++ + ++ E+M GSL + L ++ + +A +A G++F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+ N I+RDL+A+N+L+ + K++DFGLAR + T + + APE + G
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYG 185
Query: 209 HLTPKSDVYSFGVVLLELLSGRR 231
T KSDV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 60
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 118
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 119 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 177 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 29 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 82
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 83 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 140
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 141 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 198
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 199 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 10 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 63
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 64 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 121
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 122 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 179
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 180 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 64
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 122
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 123 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 181 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL-KAESFQ 69
S S + ++ KN LG G FG V++G Q + P P S + VA+K L + S Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTLPEVCSEQ 76
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
++L E + + + H+N+V+ IG +S R ++ E M G L++ L +P S P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-SQP 135
Query: 130 TRVK------IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARD 180
+ + +A D+A G +L + + I+RD+ A N LL AK+ DFG+A+D
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ + PE G T K+D +SFGV+L E+ S +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--- 250
Query: 241 AEQTLVEWA------DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
+ Q ++E+ DP V RIM QC P++R
Sbjct: 251 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMT--------------------QCWQHQPEDR 290
Query: 295 PSMVDVLTSLEQLHTSKDMPRTPPPAK 321
P+ +L +E D+ T P +
Sbjct: 291 PNFAIILERIEYCTQDPDVINTALPIE 317
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + N + VAIK++ Q + + L E+ L + RHE
Sbjct: 51 IGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV------QPISWPTRVKIAIDVARG 141
N++ + R E M L HL + Q +S + RG
Sbjct: 102 NIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYA 200
L ++H ANV++RDLK SN+LL++ + K+ DFGLAR P D+T T V TR Y
Sbjct: 157 LKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 201 APEYVATGHLTPKS-DVYSFGVVLLELLSGR 230
APE + KS D++S G +L E+LS R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 145 DLVSCTYQLARGMEYLAS--QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 150 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEVIYLGQLRHE 87
+GEG FG VF+ P +P + +VA+K LK E S ++ E + + +
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-----------------------GVQ 124
N+VKL+G C+ L++E+M G L N R G
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 125 PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG 184
P+S ++ IA VA G+++L + ++RDL N L+ N K++DFGL+R+ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 185 DNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
D + PE + T +SDV+++GVVL E+ S
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 147 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ E+ KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N +++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
+GEG +G V + + T+ VAIK++ Q + + L E+ L + RHE
Sbjct: 51 IGEGAYGMVSSAY---DHVRKTR------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK-GVQPISWPTRVKIAIDVARGLSFLH 146
N++ + S + ++ + +E L++ Q +S + RGL ++H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYV 205
ANV++RDLK SN+L+++ + K+ DFGLAR P D+T T V TR Y APE +
Sbjct: 162 S--ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 206 ATGHLTPKS-DVYSFGVVLLELLSGR 230
KS D++S G +L E+LS R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQL-R 85
++GEG FG V K I K G + AIKR+K S H+++ E+ L +L
Sbjct: 32 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------------QPISWPTR 131
H N++ L+G C L E+ P G+L + L + V +S
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ A DVARG+ +L I+RDL A N+L+ N+ AK++DFGL+R G +V
Sbjct: 145 LHFAADVARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKK 198
Query: 192 RI--VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ + R + A E + T SDV+S+GV+L E++S
Sbjct: 199 TMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQL-R 85
++GEG FG V K I K G + AIKR+K S H+++ E+ L +L
Sbjct: 22 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------------QPISWPTR 131
H N++ L+G C L E+ P G+L + L + V +S
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ A DVARG+ +L I+RDL A N+L+ N+ AK++DFGL+R G +V
Sbjct: 135 LHFAADVARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKK 188
Query: 192 RI--VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ + R + A E + T SDV+S+GV+L E++S
Sbjct: 189 TMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI----YLGQL 84
LG G FG V ++ + K + + VA+K LK + +E L + YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI---------- 134
H N+V L+G C+ L++ E+ G L N L RK I T I
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 135 ------AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH 188
+ VA+G++FL N I+RDL A N+LL K+ DFGLAR N
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
V + APE + T +SDV+S+G+ L EL S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-----------FRKGVQP---ISWPTRV 132
+N++ L+G C++ ++ E+ KG+L +L F P +S V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 131/294 (44%), Gaps = 32/294 (10%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF- 68
P S+ I K+ LG+G FG V +G D AP+ G + VA+K LK +
Sbjct: 7 PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLS 60
Query: 69 --QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ +++ EV + L H NL++L G ++ V E P GSL + L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHF 118
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
T + A+ VA G+ +L I+RDL A N+LL + K+ DFGL R P D+
Sbjct: 119 LLGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 187 THV--STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
+V R V + APE + T + SD + FGV L E+ + + E GL
Sbjct: 177 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQ 232
Query: 245 LVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
++ D ++ R+ R D Q +QC P++RP+ V
Sbjct: 233 ILHKID---KEGERLPRPEDC----------PQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAI L+ A S
Sbjct: 38 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIMELREATS 91
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 92 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 149
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 150 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 207
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 208 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 22/208 (10%)
Query: 28 LLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTE-VIYLGQLR 85
+LG G FG V KG WI P I V IK ++ +S + + +T+ ++ +G L
Sbjct: 38 VLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQP---ISWPTRVKIAIDVAR 140
H ++V+L+G C S +L V +++P GSL +H+ R + P ++W + +A+
Sbjct: 92 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAK 144
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
G+ +L + +++R+L A NVLL S +++DFG+A P D + + +
Sbjct: 145 GMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 201 APEYVATGHLTPKSDVYSFGVVLLELLS 228
A E + G T +SDV+S+GV + EL++
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 25 SDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRL-KAESFQGHKEWLTEVIYLG 82
SD ++G+G FG V+ G +IDQ + I AIK L + Q + +L E + +
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQ-------NRIQCAIKSLSRITEMQQVEAFLREGLLMR 77
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR-------VKIA 135
L H N++ LIG +L E +P L +Q I P R +
Sbjct: 78 GLNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD----NTHVST 191
+ VARG+ +L + ++RDL A N +LD +F K++DFGLARD + H
Sbjct: 131 LQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
R+ + A E + T T KSDV+SFGV+L ELL+
Sbjct: 189 RL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +L G FG V+KG WI P I VAIK L+ A S
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 64
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 122
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 123 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 181 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 118 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 118 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +L G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-- 68
S S+ I K+ LG+G FG V +G D AP+ G + VA+K LK +
Sbjct: 2 SQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQ 55
Query: 69 -QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +++ EV + L H NL++L G ++ V E P GSL + L RK
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFL 113
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
T + A+ VA G+ +L I+RDL A N+LL + K+ DFGL R P D+
Sbjct: 114 LGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 188 HV--STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
+V R V + APE + T + SD + FGV L E+ + + E GL +
Sbjct: 172 YVMQEHRKVPF-AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQI 227
Query: 246 VEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
+ D ++ R+ R D Q +QC P++RP+ V
Sbjct: 228 LHKID---KEGERLPRPEDC----------PQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-- 68
S S+ I K+ LG+G FG V +G D AP+ G + VA+K LK +
Sbjct: 2 SQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQ 55
Query: 69 -QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +++ EV + L H NL++L G ++ V E P GSL + L RK
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFL 113
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
T + A+ VA G+ +L I+RDL A N+LL + K+ DFGL R P D+
Sbjct: 114 LGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 188 HV--STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
+V R V + APE + T + SD + FGV L E+ + + E GL +
Sbjct: 172 YVMQEHRKVPF-AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQI 227
Query: 246 VEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
+ D ++ R+ R D Q +QC P++RP+ V
Sbjct: 228 LHKID---KEGERLPRPEDC----------PQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 61
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L++ + MP G L +++ R+ I
Sbjct: 62 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIG 119
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 120 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 178 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 102/223 (45%), Gaps = 38/223 (17%)
Query: 32 GGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTE--VIYLGQLRHENL 89
G FGCV+K + A +K Q + W E V L ++HEN+
Sbjct: 35 GRFGCVWKAQLLNEYVA--------------VKIFPIQDKQSWQNEYEVYSLPGMKHENI 80
Query: 90 VKLIGY----CSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
++ IG S + L+ F KGSL + L +SW IA +ARGL++L
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYL 137
Query: 146 H--------GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
H G + +RD+K+ NVLL +N A ++DFGLA G + + VGTR
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
Query: 198 GYAAPEYVATGHLTPKS------DVYSFGVVLLELLSGRRALD 234
Y APE V G + + D+Y+ G+VL EL S A D
Sbjct: 198 RYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 22/208 (10%)
Query: 28 LLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTE-VIYLGQLR 85
+LG G FG V KG WI P I V IK ++ +S + + +T+ ++ +G L
Sbjct: 20 VLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQP---ISWPTRVKIAIDVAR 140
H ++V+L+G C S +L V +++P GSL +H+ R + P ++W + +A+
Sbjct: 74 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAK 126
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
G+ +L + +++R+L A NVLL S +++DFG+A P D + + +
Sbjct: 127 GMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 201 APEYVATGHLTPKSDVYSFGVVLLELLS 228
A E + G T +SDV+S+GV + EL++
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 12/221 (5%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAE-S 67
P+ +++ + +LG G FG V+KG WI P I VAIK L+ S
Sbjct: 6 PNQALLRILKETELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + +L+G C S +L V + MP G L +H+ R+ +
Sbjct: 60 PKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHV-RENRGRLG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
+ + +A+G+S+L D +++RDL A NVL+ S + K++DFGLAR +
Sbjct: 118 SQDLLNWCMQIAKGMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 107/224 (47%), Gaps = 39/224 (17%)
Query: 32 GGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTE--VIYLGQLRHENL 89
G FGCV+K + N F VA+K Q + W +E + ++HENL
Sbjct: 26 GRFGCVWKAQL-MNDF----------VAVKIF---PLQDKQSWQSEREIFSTPGMKHENL 71
Query: 90 VKLIGYCSESDNR----LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
++ I N L+ F KGSL ++L KG I+W +A ++RGLS+L
Sbjct: 72 LQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--KG-NIITWNELCHVAETMSRGLSYL 128
Query: 146 H---------GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
H G ++ +RD K+ NVLL S+ A L+DFGLA G + VGT
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
Query: 197 RGYAAPEYVATGHLTPKS------DVYSFGVVLLELLSGRRALD 234
R Y APE V G + + D+Y+ G+VL EL+S +A D
Sbjct: 189 RRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +L G FG V+KG WI P I VAIK L+ A S
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 64
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 122
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 123 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 181 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ + KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 57
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 115
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 116 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 174 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 59
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 117
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 118 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 176 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AES 67
P+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATS 64
Query: 68 FQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPIS 127
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIG 122
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDN 186
+ + +A+G+++L D +++RDL A NVL+ + + K++DFG A+ G
Sbjct: 123 SQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 181 YHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT--EVIYLGQLR 85
+LG+G FG VF T+P SG + A+K LK + + T E L +
Sbjct: 35 VLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 86 HENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
H +VKL Y +++ +L L+ +F+ G L L K V + +A ++A GL
Sbjct: 89 HPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELALGLDH 145
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
LH L +IYRDLK N+LLD + KL+DFGL+++ D+ + GT Y APE
Sbjct: 146 LHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEV 201
Query: 205 VATGHLTPKSDVYSFGVVLLELLSG 229
V + +D +S+GV++ E+L+G
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 28 LLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEVIYLGQLR 85
+LG G FG V+KG WI P I VAIK L+ A S + +KE L E + +
Sbjct: 16 VLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
+ ++ +L+G C S +L+ + MP G L +++ R+ I + + +A+G+++L
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDNTHVSTRIVGTRGYAAPEY 204
D +++RDL A NVL+ + + K++DFGLA+ G H V + + A E
Sbjct: 128 E--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALES 184
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ T +SDV+S+GV + EL++
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK---GVQPISWPTR-----------V 132
+N++ L+G C++ ++ E+ KG+L +L + G++ P+ V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 139 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRK---GVQPISWPTR-----------V 132
+N++ L+G C++ ++ E+ KG+L +L + G++ P+ V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF- 68
P S+ I K+ LG+G FG V +G D AP+ G + VA+K LK +
Sbjct: 7 PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLS 60
Query: 69 --QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPI 126
+ +++ EV + L H NL++L G ++ V E P GSL + L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHF 118
Query: 127 SWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
T + A+ VA G+ +L I+RDL A N+LL + K+ DFGL R P D+
Sbjct: 119 LLGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 187 THV--STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
V R V + APE + T + SD + FGV L E+ + + E GL
Sbjct: 177 HXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQ 232
Query: 245 LVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
++ D ++ R+ R D Q +QC P++RP+ V
Sbjct: 233 ILHKID---KEGERLPRPEDC----------PQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL--KAESFQGHKEWL-TEVIYLGQL 84
LLG+G F V++ +G+ VAIK + KA G + + EV QL
Sbjct: 18 LLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+H ++++L Y +S+ LV E G + +L + V+P S + G+ +
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLY 127
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
LH +++RDL SN+LL N N K++DFGLA H + + GT Y +PE
Sbjct: 128 LHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDED--RGGLAEQTLVEWADP 251
+SDV+S G + LL GR D D + L + L ++ P
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 45/305 (14%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 90
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPT------------- 130
H N+V L+G C++ L+V EF G+L +L K + + + T
Sbjct: 91 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 150 LICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 191 TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWAD 250
+ APE + T +SDV+SFGV+L E+ S G + V+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDE 258
Query: 251 PFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQL 307
F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 259 EFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 308 HTSKD 312
+ +D
Sbjct: 312 NAQQD 316
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEWLTEVIYLGQLR 85
LG+G FG V +G D AP+ G + VA+K LK + + +++ EV + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H NL++L G ++ V E P GSL + L RK T + A+ VA G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV--STRIVGTRGYAAPE 203
I+RDL A N+LL + K+ DFGL R P D+ +V R V + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWCAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIM 263
+ T + SD + FGV L E+ + + E GL ++ D ++ R+ R
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQILHKID---KEGERLPRPE 238
Query: 264 DTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
D Q +QC P++RP+ V
Sbjct: 239 DC----------PQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 29 LGEGGFGCVFKGW---IDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL- 84
LGEG FG V ID++ KP + VA+K LK ++ + L + + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 85 -RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF--------------RKGVQPISWP 129
+H+N++ L+G C++ ++ + KG+L +L R + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V +ARG+ +L I+RDL A NVL+ N K++DFGLARD D
Sbjct: 158 DLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEWLTEVIYLGQLR 85
LG+G FG V +G D AP+ G + VA+K LK + + +++ EV + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H NL++L G ++ V E P GSL + L RK T + A+ VA G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV--STRIVGTRGYAAPE 203
I+RDL A N+LL + K+ DFGL R P D+ +V R V + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWCAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIM 263
+ T + SD + FGV L E+ + + E GL ++ D ++ R+ R
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQILHKID---KEGERLPRPE 238
Query: 264 DTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
D Q +QC P++RP+ V
Sbjct: 239 DC----------PQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA-ESFQGHKEWLTEVIYLGQL-R 85
++GEG FG V K I K G + AIKR+K S H+++ E+ L +L
Sbjct: 29 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--------------QPISWPTR 131
H N++ L+G C L E+ P G+L + L + V +S
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ A DVARG+ +L I+R+L A N+L+ N+ AK++DFGL+R G +V
Sbjct: 142 LHFAADVARGMDYLS--QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKK 195
Query: 192 RI--VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ + R + A E + T SDV+S+GV+L E++S
Sbjct: 196 TMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 143 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 147 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 14/221 (6%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLK-AESF 68
+ +++ + F +LG G FG V+KG WI P I VAIK L+ A S
Sbjct: 2 AMALLRILKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSP 55
Query: 69 QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISW 128
+ +KE L E + + + ++ +L+G C S +L+ + MP G L +++ R+ I
Sbjct: 56 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGS 113
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR-DGPTGDNT 187
+ + +A G+++L D +++RDL A NVL+ + + K++DFGLA+ G
Sbjct: 114 QYLLNWCVQIAEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
H V + + A E + T +SDV+S+GV + EL++
Sbjct: 172 HAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 146 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 46/295 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG--HKEWLTEVIYLGQLRH 86
LGE FG V+KG + F P VAIK LK ++ +G +E+ E + +L+H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF-----------------RKGVQPISWP 129
N+V L+G ++ +++ + G L L + ++P P
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP---P 145
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V + +A G+ +L +V+++DL NVL+ N K+SD GL R+ D +
Sbjct: 146 DFVHLVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ + APE + G + SD++S+GVVL E+ S + G + Q +VE
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL---QPYCGYSNQDVVE-- 258
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSL 304
+ +R+VL D Y+ ++C + P RP D+ + L
Sbjct: 259 ---MIRNRQVLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL--KAESFQGHKEWLTEVIYLGQLR 85
L+GEG +G V K +G +VAIK+ + K + E+ L QLR
Sbjct: 32 LVGEGSYGMVMKC---------RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLEN-HLFRKGVQPISWPTRVKIAIDVARGLSF 144
HENLV L+ C + LV+EF+ L++ LF G + + K + G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGF 139
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
H N+I+RD+K N+L+ + KL DFG AR V V TR Y APE
Sbjct: 140 CHS--HNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPEL 195
Query: 205 VATGHLTPKS-DVYSFGVVLLELLSGR 230
+ K+ DV++ G ++ E+ G
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 44/304 (14%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 91
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 92 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 151 IXYSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADP 251
+ APE + T +SDV+SFGV+L E+ S G + V+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEE 259
Query: 252 FLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQLH 308
F R + R+ Y+ E L C H +P RP+ +V+ L +L Q +
Sbjct: 260 FCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 309 TSKD 312
+D
Sbjct: 313 AQQD 316
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEVIYLGQLRHE 87
LG GGFG V + WI Q+T G VAIK+ + E S + + W E+ + +L H
Sbjct: 22 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 88 NLVKL------IGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVA 139
N+V + + +D LL E+ G L +L F P R ++ D++
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 131
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLD---SNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
L +LH + +I+RDLK N++L K+ D G A++ G+ + T VGT
Sbjct: 132 SALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGT 186
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRR 231
Y APE + T D +SFG + E ++G R
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEVIYLGQLRHE 87
LG GGFG V + WI Q+T G VAIK+ + E S + + W E+ + +L H
Sbjct: 23 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 88 NLVKL------IGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVA 139
N+V + + +D LL E+ G L +L F P R ++ D++
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 132
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLD---SNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
L +LH + +I+RDLK N++L K+ D G A++ G+ + T VGT
Sbjct: 133 SALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGT 187
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRR 231
Y APE + T D +SFG + E ++G R
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 46/295 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG--HKEWLTEVIYLGQLRH 86
LGE FG V+KG + F P VAIK LK ++ +G +E+ E + +L+H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF-----------------RKGVQPISWP 129
N+V L+G ++ +++ + G L L + ++P P
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP---P 128
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V + +A G+ +L +V+++DL NVL+ N K+SD GL R+ D +
Sbjct: 129 DFVHLVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ + APE + G + SD++S+GVVL E+ S + G + Q +VE
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL---QPYCGYSNQDVVE-- 241
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSL 304
+ +R+VL D Y+ ++C + P RP D+ + L
Sbjct: 242 ---MIRNRQVLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWLTEVIYLGQLRH 86
+LG G FG V+KG + P I VAIK L + + + E++ E + + + H
Sbjct: 22 VLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+LV+L+G C S LV + MP G L ++ I + + +A+G+ +L
Sbjct: 77 PHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHK-DNIGSQLLLNWCVQIAKGMMYLE 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
+ +++RDL A NVL+ S + K++DFGLAR + + + + A E +
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 207 TGHLTPKSDVYSFGVVLLELLS 228
T +SDV+S+GV + EL++
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL--RH 86
LGEG FG V + KP VA+K LK+++ + L + + ++ +H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL-------FRKGVQPISWPTR-------V 132
+N++ L+G C++ ++ E+ KG+L +L P P V
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
A VARG+ +L I+RDL A NVL+ + K++DFGLARD D +T
Sbjct: 195 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWLTEVIYLGQLRH 86
+LG G FG V+KG + P I VAIK L + + + E++ E + + + H
Sbjct: 45 VLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+LV+L+G C S LV + MP G L ++ I + + +A+G+ +L
Sbjct: 100 PHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHK-DNIGSQLLLNWCVQIAKGMMYLE 157
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
+ +++RDL A NVL+ S + K++DFGLAR + + + + A E +
Sbjct: 158 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 207 TGHLTPKSDVYSFGVVLLELLS 228
T +SDV+S+GV + EL++
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 124/275 (45%), Gaps = 32/275 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEWLTEVIYLGQLR 85
LG+G FG V +G D AP+ G + VA+K LK + + +++ EV + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H NL++L G ++ V E P GSL + L RK T + A+ VA G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV--STRIVGTRGYAAPE 203
I+RDL A N+LL + K+ DFGL R P D+ V R V + APE
Sbjct: 128 ES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF-AWCAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIM 263
+ T + SD + FGV L E+ + + E GL ++ D ++ R+ R
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQILHKID---KEGERLPRPE 238
Query: 264 DTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMV 298
D Q +QC P++RP+ V
Sbjct: 239 DC----------PQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GLSF H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 113 LQGLSFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 168
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTRVK---------- 133
H N+V L+G C++ L+V EF G+L +L K + + + K
Sbjct: 90 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI 193
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 149 YSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 194 VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFL 253
+ APE + T +SDV+SFGV+L E+ S G + V+ + F
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFC 257
Query: 254 RDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
R + R+ Y+ E L C H +P RP+ +++ L L
Sbjct: 258 RRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LGEG +G V+K I + T G +VAIK++ ES +E + E+ + Q +
Sbjct: 37 LGEGSYGSVYKA-IHKET--------GQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VK G ++ + +V E+ GS+ + + R + ++ I +GL +LH +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
I+RD+KA N+LL++ +AKL+DFG+A G D ++GT + APE +
Sbjct: 145 RK--IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 209 HLTPKSDVYSFGVVLLELLSGR 230
+D++S G+ +E+ G+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 90 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 257
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 258 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 307 LHTSKD 312
+ +D
Sbjct: 311 ANAQQD 316
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 43/313 (13%)
Query: 17 KIATKNFCSDYLLGEGGFGCV--FKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEW 74
K + ++F LG G FG V + + +A IVV +K+++ +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 75 LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E + L + H ++++ G ++ ++ +++ G L + L RK Q P
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKS-QRFPNPVAKFY 111
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
A +V L +LH D +IYRDLK N+LLD N + K++DFG A+ P V+ +
Sbjct: 112 AAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVEWA--DP 251
GT Y APE V+T D +SFG+++ E+L+G D + E+ L P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 252 FLRD------SRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLE 305
F + SR + R + RLG LQ D KN P +V+ +
Sbjct: 225 FFNEDVKDLLSRLITRDLSQRLGN--------------LQNGTEDVKNHPWFKEVVWE-K 269
Query: 306 QLHTSKDMPRTPP 318
L + + P PP
Sbjct: 270 LLSRNIETPYEPP 282
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 80
Query: 85 RHENLVKLIGYCSESDNRLLVY-EFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 81 -HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 248
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 249 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 307 LHTSKD 312
+ +D
Sbjct: 302 ANAQQD 307
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTRVK---------- 133
H N+V L+G C++ L+V EF G+L +L K + + + K
Sbjct: 90 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI 193
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 149 YSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 194 VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFL 253
+ APE + T +SDV+SFGV+L E+ S G + V+ + F
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFX 257
Query: 254 RDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
R + R+ Y+ E L C H +P RP+ +++ L L
Sbjct: 258 RRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 80
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 81 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 248
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 249 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 307 LHTSKD 312
+ +D
Sbjct: 302 ANAQQD 307
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWL 75
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAI 54
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 113
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR G T V
Sbjct: 114 FQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVV 169
Query: 196 TRGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
T Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 90 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 257
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 258 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 307 LHTSKD 312
+ +D
Sbjct: 311 ANAQQD 316
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 52
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 167
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 120 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 175
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+R G++ ++ PE
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSR--GSKFPVRWSPPEV 177
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 36/229 (15%)
Query: 22 NFCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG---HKEW 74
N SD+ LLGEG +G V T PT G +VAIK++ E F
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKI--EPFDKPLFALRT 56
Query: 75 LTEVIYLGQLRHENLVKLIGY----CSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPT 130
L E+ L +HEN++ + E+ N + + + + + L + Q +S
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTH 188
R + LHG +NVI+RDLK SN+L++SN + K+ DFGLAR D DN+
Sbjct: 114 IQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 189 VS------TRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGR 230
+ T V TR Y APE + T ++ DV+S G +L EL R
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 113 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 168
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 113 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 168
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 36/229 (15%)
Query: 22 NFCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG---HKEW 74
N SD+ LLGEG +G V T PT G +VAIK++ E F
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKI--EPFDKPLFALRT 56
Query: 75 LTEVIYLGQLRHENLVKLIGY----CSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPT 130
L E+ L +HEN++ + E+ N + + + + + L + Q +S
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTH 188
R + LHG +NVI+RDLK SN+L++SN + K+ DFGLAR D DN+
Sbjct: 114 IQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 189 VS------TRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGR 230
+ T V TR Y APE + T ++ DV+S G +L EL R
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 113 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 168
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 120 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 175
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 48/315 (15%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVI 79
KN LGEG FG V K F VA+K LK + ++ L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR-KGVQP------------- 125
L Q+ H +++KL G CS+ LL+ E+ GSL L + V P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 126 --------ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
++ + A +++G+ +L + ++++RDL A N+L+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+RD D+ ++ + A E + T +SDV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------L 248
Query: 238 GGLAEQTLVEWADPFLR-DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS 296
GG +P+ R+ ++ T + ++ LQC +P RP
Sbjct: 249 GG----------NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 297 MVDVLTSLEQLHTSK 311
D+ LE++ +
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 90 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 257
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 258 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 307 LHTSKD 312
+ +D
Sbjct: 311 ANAQQD 316
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+ VG++ ++ PE
Sbjct: 119 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSS--VGSKFPVRWSPPEV 172
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 126
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 127 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 186 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 294
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 295 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
Query: 307 LHTSKD 312
+ +D
Sbjct: 348 ANAQQD 353
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 80
Query: 85 RHENLVKLIGYCSESDNRLLVY-EFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 81 -HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 248
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 249 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 307 LHTSKD 312
+ +D
Sbjct: 302 ANAQQD 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 80
Query: 85 RHENLVKLIGYCSESDNRLLVY-EFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 81 -HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 248
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 249 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 307 LHTSKD 312
+ +D
Sbjct: 302 ANAQQD 307
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV---IYLGQL 84
LG G FG V I+ + F K + VA+K LK + H+ ++E+ I++G
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 91
Query: 85 RHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTR------------ 131
H N+V L+G C++ L+V EF G+L +L K + + +
Sbjct: 92 -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 132 --VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
+ + VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 151 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWA 249
+ APE + T +SDV+SFGV+L E+ S G + V+
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKID 259
Query: 250 DPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQ 306
+ F R + R+ Y+ E L C H +P RP+ +V+ L +L Q
Sbjct: 260 EEFCRRLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
Query: 307 LHTSKD 312
+ +D
Sbjct: 313 ANAQQD 318
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVI 79
KN LGEG FG V K F VA+K LK + ++ L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR-KGVQP------------- 125
L Q+ H +++KL G CS+ LL+ E+ GSL L + V P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 126 --------ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
++ + A +++G+ +L + +++RDL A N+L+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+RD D+ ++ + A E + T +SDV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------L 248
Query: 238 GGLAEQTLVEWADPFLR-DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS 296
GG +P+ R+ ++ T + ++ LQC +P RP
Sbjct: 249 GG----------NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 297 MVDVLTSLEQLHTSK 311
D+ LE++ +
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+ VG++ ++ PE
Sbjct: 123 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSS--VGSKFPVRWSPPEV 176
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 46 TFAPTKPG----SGIVVAIK---RLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSE 98
TF K G +G VA+K R K S + E+ L RH +++KL S
Sbjct: 28 TFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST 87
Query: 99 SDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLK 158
+ +V E++ G L +++ + G + ++ + G+ + H V++RDLK
Sbjct: 88 PSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHR--HMVVHRDLK 143
Query: 159 ASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLT--PKSDV 216
NVLLD++ NAK++DFGL+ G+ S G+ YAAPE V +G L P+ D+
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLYAGPEVDI 199
Query: 217 YSFGVVLLELLSGRRALDED 236
+S GV+L LL G D+D
Sbjct: 200 WSSGVILYALLCGTLPFDDD 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+ VG++ ++ PE
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSS--VGSKFPVRWSPPEV 177
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVI 79
KN LGEG FG V K F VA+K LK + ++ L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR-KGVQP------------- 125
L Q+ H +++KL G CS+ LL+ E+ GSL L + V P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 126 --------ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL 177
++ + A +++G+ +L + +++RDL A N+L+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 178 ARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+RD D+ ++ + A E + T +SDV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------L 248
Query: 238 GGLAEQTLVEWADPFLR-DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS 296
GG +P+ R+ ++ T + ++ LQC +P RP
Sbjct: 249 GG----------NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 297 MVDVLTSLEQLHTSK 311
D+ LE++ +
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+ VG++ ++ PE
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSS--VGSKFPVRWSPPEV 192
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ + S+ VG++ ++ PE
Sbjct: 130 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSS--VGSKFPVRWSPPEV 183
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 9 DPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAI---KRLKA 65
+P +S+ N+ LGEG FG V + T G + + I K L
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAY-------HTTTGQKVALKIINKKVLAK 54
Query: 66 ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ- 124
QG E E+ YL LRH +++KL D ++V E+ N LF VQ
Sbjct: 55 SDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQR 107
Query: 125 -PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+S + + + + H +++RDLK N+LLD + N K++DFGL+
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165
Query: 184 GDNTHVSTRIVGTRGYAAPEYVATGHLT--PKSDVYSFGVVLLELLSGRRALDED 236
G+ S G+ YAAPE V +G L P+ DV+S GV+L +L R D++
Sbjct: 166 GNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 9 DPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAI---KRLKA 65
+P +S+ N+ LGEG FG V + T G + + I K L
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAY-------HTTTGQKVALKIINKKVLAK 53
Query: 66 ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ- 124
QG E E+ YL LRH +++KL D ++V E+ N LF VQ
Sbjct: 54 SDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQR 106
Query: 125 -PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+S + + + + H +++RDLK N+LLD + N K++DFGL+
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164
Query: 184 GDNTHVSTRIVGTRGYAAPEYVATGHLT--PKSDVYSFGVVLLELLSGRRALDED 236
G+ S G+ YAAPE V +G L P+ DV+S GV+L +L R D++
Sbjct: 165 GNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L++ + + I P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLF 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 166
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ L++ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 20/235 (8%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-- 73
+++ NF +LG+G FG V + + +G + A+K LK + +
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVE 68
Query: 74 -WLTEVIYLGQLRHENLVKLIGYCSESDNRLL-VYEFMPKGSLENHLFRKGVQPISWPTR 131
+TE L R+ + + C ++ +RL V EF+ G L H+ +K + R
Sbjct: 69 CTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARAR 127
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ L FLH D +IYRDLK NVLLD + KL+DFG+ ++G N +
Sbjct: 128 F-YAAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTA 182
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALD-EDRGGLAEQTL 245
GT Y APE + P D ++ GV+L E+L G + E+ L E L
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 106/237 (44%), Gaps = 20/237 (8%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-- 73
S++ F LLG+G FG V + +G A+K LK E E
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVA 53
Query: 74 -WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
LTE L RH L L Y ++ +RL V E+ G L HL R+ V S
Sbjct: 54 HTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRA 110
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
++ L +LH + NV+YRDLK N++LD + + K++DFGL ++G T
Sbjct: 111 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MK 167
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 53
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ L++ + + I P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 168
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 106/229 (46%), Gaps = 36/229 (15%)
Query: 22 NFCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG---HKEW 74
N SD+ LLGEG +G V T PT G +VAIK++ E F
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKI--EPFDKPLFALRT 56
Query: 75 LTEVIYLGQLRHENLVKLIGY----CSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPT 130
L E+ L +HEN++ + E+ N + + + + + L + Q +S
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTH 188
R + LHG +NVI+RDLK SN+L++SN + K+ DFGLAR D DN+
Sbjct: 114 IQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 189 VS------TRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGR 230
+ V TR Y APE + T ++ DV+S G +L EL R
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V G W Q VAIK +K E E++ E + L HE
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
LV+L G C++ ++ E+M G L N+L R+ +++ DV + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR---GYAAPEY 204
++RDL A N L++ K+SDFGL+R D+ S+ VG++ ++ PE
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEETSS--VGSKFPVRWSPPEV 192
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ + KSD+++FGV++ E+ S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 166
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P +G +VA+K+L+ +++ E+ L L +
Sbjct: 31 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 89 LVKLIG--YCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G Y + LV E++P G L + L R + + + + + +G+ +L
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG 144
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
++RDL A N+L++S + K++DFGLA+ P + +V R G + APE
Sbjct: 145 S--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPES 201
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
++ + +SDV+SFGVVL EL +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P +G +VA+K+L+ +++ E+ L L +
Sbjct: 18 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 89 LVKLIG--YCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G Y + LV E++P G L + L R + + + + + +G+ +L
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG 131
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
++RDL A N+L++S + K++DFGLA+ P + +V R G + APE
Sbjct: 132 S--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPES 188
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
++ + +SDV+SFGVVL EL +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 166
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 55
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 114
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 115 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 170
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 53
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 168
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 53
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 168
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 13 SMISKIATKNFCSDYLLGEGGFGCVFKGWIDQ-NTFAPTKPGSGIVVAIKRLKAESFQGH 71
S+ K+ ++F +LG+G FG VF + N F K VV + E
Sbjct: 9 SLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD-DVECTMVE 67
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR 131
K L+ H L + +N V E++ G L H+ +
Sbjct: 68 KRVLSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRA 120
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL FLH ++YRDLK N+LLD + + K++DFG+ ++ GD +
Sbjct: 121 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TN 176
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
GT Y APE + D +SFGV+L E+L G+
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 166
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 12 ASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH 71
+M ++ F LLG+G FG V + +G A+K LK E
Sbjct: 1 GAMDPRVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAK 51
Query: 72 KE---WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPIS 127
E LTE L RH L L Y ++ +RL V E+ G L HL R+ V S
Sbjct: 52 DEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV--FS 108
Query: 128 WPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNT 187
++ L +LH + NV+YRDLK N++LD + + K++DFGL ++G T
Sbjct: 109 EDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 167
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLV 246
GT Y APE + D + GVV+ E++ GR ++D L E L+
Sbjct: 168 --MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225
Query: 247 E 247
E
Sbjct: 226 E 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 53
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 113 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 168
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 52
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 167
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 51
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 166
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE---WLTEVIYLGQL 84
LLG+G FG V + +G A+K LK E E LTE L
Sbjct: 158 LLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLS 143
RH L L Y ++ +RL V E+ G L HL R+ V S ++ L
Sbjct: 209 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 265
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
+LH + NV+YRDLK N++LD + + K++DFGL ++G D + T GT Y APE
Sbjct: 266 YLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAPE 322
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
+ D + GVV+ E++ GR ++D L E L+E
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 367
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 52
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 167
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQ 83
+D LG G FG V +G + K I VAIK LK + + +E + E + Q
Sbjct: 14 ADIELGCGNFGSVRQG-----VYRMRK--KQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 66
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ-PISWPTRVKIAIDVARGL 142
L + +V+LIG C +++ +LV E G L L K + P+S ++ V+ G+
Sbjct: 67 LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGM 123
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR--GYA 200
+L + N ++RDL A NVLL + AK+SDFGL++ D+++ + R G +
Sbjct: 124 KYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 180
Query: 201 APEYVATGHLTPKSDVYSFGVVLLELLS 228
APE + + +SDV+S+GV + E LS
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 15 ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE- 73
++++ F LLG+G FG V + +G A+K LK E E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEV 53
Query: 74 --WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPT 130
LTE L RH L L Y ++ +RL V E+ G L HL R+ V S
Sbjct: 54 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDR 110
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
++ L +LH + NV+YRDLK N++LD + + K++DFGL ++G T
Sbjct: 111 ARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 167
Query: 191 TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P +G +VA+K+L+ +++ E+ L L +
Sbjct: 19 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 89 LVKLIG--YCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G Y + LV E++P G L + L R + + + + + +G+ +L
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG 132
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
++RDL A N+L++S + K++DFGLA+ P + +V R G + APE
Sbjct: 133 S--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPES 189
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
++ + +SDV+SFGVVL EL +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ L+ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ + L+ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE---WLTEVIYLGQL 84
LLG+G FG V + +G A+K LK E E LTE L
Sbjct: 155 LLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLS 143
RH L L Y ++ +RL V E+ G L HL R+ V S ++ L
Sbjct: 206 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 262
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
+LH + NV+YRDLK N++LD + + K++DFGL ++G D + T GT Y APE
Sbjct: 263 YLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAPE 319
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
+ D + GVV+ E++ GR ++D L E L+E
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 364
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 52
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+EF+ L+ + + I P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 167
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+ RL E+ + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALXKIRLDTETEGVPSTAIREI 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 113 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 168
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+ RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALXKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+EF+ + L+ + + I P +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVTLW 169
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 13 SMISKIATKNFCSDYLLGEGGFGCVFKGWIDQ-NTFAPTKPGSGIVVAIKRLKAESFQGH 71
S+ K+ ++F +LG+G FG VF + N F K VV + E
Sbjct: 10 SLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD-DVECTMVE 68
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR 131
K L+ H L + +N V E++ G L H+ +
Sbjct: 69 KRVLSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRA 121
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL FLH ++YRDLK N+LLD + + K++DFG+ ++ GD +
Sbjct: 122 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TN 177
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
GT Y APE + D +SFGV+L E+L G+
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK-EWLTEVIYLGQLRHE 87
+G G FG VF G + + +VA+K + K ++L E L Q H
Sbjct: 122 IGRGNFGEVFSGRLRADN---------TLVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
N+V+LIG C++ +V E + G L +G + + T +++ D A G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLE- 230
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST---RIVGTRGYAAPEY 204
I+RDL A N L+ K+SDFG++R+ D + ++ R V + + APE
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSRE--EADGVYAASGGLRQVPVK-WTAPEA 286
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
+ G + +SDV+SFG++L E S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAI---KRLKAESFQGHKEWLTEVIYLGQLR 85
LGEG FG V + T G + + I K L QG E E+ YL LR
Sbjct: 12 LGEGSFGKVKLAY-------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ--PISWPTRVKIAIDVARGLS 143
H +++KL D ++V E+ N LF VQ +S + + +
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
+ H +++RDLK N+LLD + N K++DFGL+ G+ S G+ YAAPE
Sbjct: 118 YCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 172
Query: 204 YVATGHLT--PKSDVYSFGVVLLELLSGRRALDED 236
V +G L P+ DV+S GV+L +L R D++
Sbjct: 173 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 7 MSDPSASMISKIATKN---FCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
SDP K+ K +D LG G FG V +G I VAIK L
Sbjct: 319 FSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRK-------KQIDVAIKVL 371
Query: 64 KAESFQGH-KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG 122
K + + +E + E + QL + +V+LIG C +++ +LV E G L L K
Sbjct: 372 KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR 430
Query: 123 VQ-PISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDG 181
+ P+S ++ V+ G+ +L + N ++R+L A NVLL + AK+SDFGL++
Sbjct: 431 EEIPVS--NVAELLHQVSMGMKYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSK-A 485
Query: 182 PTGDNTHVSTRIVGT--RGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
D+++ + R G + APE + + +SDV+S+GV + E LS
Sbjct: 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 33 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 80
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 138
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 139 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 193
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEW 248
+ H + +SD++S G+ L+E+ GR + G +A L+++
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDY 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V + SG +VA+K++ Q + EV+
Sbjct: 150 RSYLDNFIKIGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVV 200
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 201 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 255
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 256 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 311
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK-EWLTEVIYLGQLRHE 87
+G G FG VF G + + +VA+K + K ++L E L Q H
Sbjct: 122 IGRGNFGEVFSGRLRADN---------TLVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
N+V+LIG C++ +V E + G L +G + + T +++ D A G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLE- 230
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RDL A N L+ K+SDFG++R+ G + APE +
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 208 GHLTPKSDVYSFGVVLLELLS 228
G + +SDV+SFG++L E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Query: 15 ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE- 73
+ ++ +F +LG+G FG V + G+ + AIK LK + +
Sbjct: 13 LDRVKLTDFNFLMVLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDV 63
Query: 74 --WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPT 130
+ E L L + + C ++ +RL V E++ G L H+ + V P
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQ 121
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
V A +++ GL FLH +IYRDLK NV+LDS + K++DFG+ ++ V+
Sbjct: 122 AVFYAAEISIGLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVT 176
Query: 191 TR-IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALD-EDRGGLAEQTL 245
TR GT Y APE +A D +++GV+L E+L+G+ D ED L + +
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAI---KRLKAESFQGHKEWLTEVIYLGQLR 85
LGEG FG V + T G + + I K L QG E E+ YL LR
Sbjct: 16 LGEGSFGKVKLAY-------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQ--PISWPTRVKIAIDVARGLS 143
H +++KL D ++V E+ N LF VQ +S + + +
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
+ H +++RDLK N+LLD + N K++DFGL+ G+ S G+ YAAPE
Sbjct: 122 YCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 176
Query: 204 YVATGHLT--PKSDVYSFGVVLLELLSGRRALDED 236
V +G L P+ DV+S GV+L +L R D++
Sbjct: 177 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V T SG +VA+K++ Q + EV+
Sbjct: 28 RSYLDNFIKIGEGSTGIVCIA---------TVRSSGKLVAVKKMDLRKQQRRELLFNEVV 78
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 133
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 134 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 189
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V T SG +VA+K++ Q + EV+
Sbjct: 19 RSYLDNFIKIGEGSTGIVCIA---------TVRSSGKLVAVKKMDLRKQQRRELLFNEVV 69
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 124
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 125 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 180
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V T SG +VA+K++ Q + EV+
Sbjct: 30 RSYLDNFIKIGEGSTGIVCIA---------TVRSSGKLVAVKKMDLRKQQRRELLFNEVV 80
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 135
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 136 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 191
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V + + P +G +VA+K+L+ +++ E+ L L +
Sbjct: 15 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 89 LVKLIG--YCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VK G Y LV E++P G L + L R + + + + + +G+ +L
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG 128
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG--YAAPEY 204
++RDL A N+L++S + K++DFGLA+ P + V R G + APE
Sbjct: 129 S--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQSPIFWYAPES 185
Query: 205 VATGHLTPKSDVYSFGVVLLELLS 228
++ + +SDV+SFGVVL EL +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 28 LLGEGGFGCVFK--GWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I Q +A V I + A++ + L EV L +L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA--------VKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++KL +S + +V E G L + + ++ + S +I V G++++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYM 137
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H N+++RDLK N+LL+S + + K+ DFGL+ NT + RI GT Y AP
Sbjct: 138 HK--HNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GTAYYIAP 192
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V G K DV+S GV+L LLSG
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLTEV 78
+NF +GEG +G V+K +N +G VVA+K RL E+ + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
L +L H N+VKL+ + LV+E + + L+ + + I P +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+GL+F H V++RDLK N+L+++ KL+DFGLAR G T V T
Sbjct: 112 LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 167
Query: 199 YAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEW 74
+ +F ++G GGFG V+ K +G + A+K L + QG
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 75 LTEVIYLGQLRHEN--LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
L E I L + + + + Y + ++L + + M G L HL + GV S
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADM 294
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL +H + V+YRDLK +N+LLD + + ++SD GLA D + H S
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS- 350
Query: 192 RIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSG----RRALDEDRGGLAEQTL- 245
VGT GY APE + G +D +S G +L +LL G R+ +D+ + TL
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 246 --VEWADPFLRDSRRVL-----RIMDTRLG 268
VE D F + R +L R ++ RLG
Sbjct: 409 MAVELPDSFSPELRSLLEGLLQRDVNRRLG 438
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEW 74
+ +F ++G GGFG V+ K +G + A+K L + QG
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 75 LTEVIYLGQLRHEN--LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
L E I L + + + + Y + ++L + + M G L HL + GV S
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADM 294
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL +H + V+YRDLK +N+LLD + + ++SD GLA D + H S
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS- 350
Query: 192 RIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSG----RRALDEDRGGLAEQTL- 245
VGT GY APE + G +D +S G +L +LL G R+ +D+ + TL
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 246 --VEWADPFLRDSRRVL-----RIMDTRLG 268
VE D F + R +L R ++ RLG
Sbjct: 409 MAVELPDSFSPELRSLLEGLLQRDVNRRLG 438
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEW 74
+ +F ++G GGFG V+ K +G + A+K L + QG
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLA 235
Query: 75 LTEVIYLGQLRHEN--LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
L E I L + + + + Y + ++L + + M G L HL + GV S
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADM 293
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL +H + V+YRDLK +N+LLD + + ++SD GLA D + H S
Sbjct: 294 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS- 349
Query: 192 RIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSG----RRALDEDRGGLAEQTL- 245
VGT GY APE + G +D +S G +L +LL G R+ +D+ + TL
Sbjct: 350 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 407
Query: 246 --VEWADPFLRDSRRVL-----RIMDTRLG 268
VE D F + R +L R ++ RLG
Sbjct: 408 MAVELPDSFSPELRSLLEGLLQRDVNRRLG 437
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF---QGHKEW 74
+ +F ++G GGFG V+ K +G + A+K L + QG
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 75 LTEVIYLGQLRHEN--LVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
L E I L + + + + Y + ++L + + M G L HL + GV S
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADM 294
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
A ++ GL +H + V+YRDLK +N+LLD + + ++SD GLA D + H S
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS- 350
Query: 192 RIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSG----RRALDEDRGGLAEQTL- 245
VGT GY APE + G +D +S G +L +LL G R+ +D+ + TL
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 246 --VEWADPFLRDSRRVL-----RIMDTRLG 268
VE D F + R +L R ++ RLG
Sbjct: 409 MAVELPDSFSPELRSLLEGLLQRDVNRRLG 438
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V + SG +VA+K++ Q + EV+
Sbjct: 73 RSYLDNFIKIGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVV 123
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 178
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 179 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 234
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+++ +++ +GEG G V T SG +VA+K++ Q + EV+
Sbjct: 23 RSYLDNFIKIGEGSTGIVCIA---------TVRSSGKLVAVKKMDLRKQQRRELLFNEVV 73
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAID 137
+ +HEN+V++ D +V EF+ G+L + + R + I+ + +
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLA 128
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
V + LS LH VI+RD+K+ ++LL + KLSDFG +VGT
Sbjct: 129 VLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTP 184
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE ++ P+ D++S G++++E++ G
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 109/210 (51%), Gaps = 24/210 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH-KEWLTEVIYLGQLRHE 87
LG G + V+KG +++ T G+ VA+K +K +S +G + E+ + +L+HE
Sbjct: 13 LGNGTYATVYKG-LNKTT--------GVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI------DVARG 141
N+V+L + LV+EFM L+ ++ + V + P +++ + + +G
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVG--NTPRGLELNLVKYFQWQLLQG 120
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAA 201
L+F H + +++RDLK N+L++ KL DFGLAR NT S V T Y A
Sbjct: 121 LAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE--VVTLWYRA 176
Query: 202 PEYVATGHLTPKS-DVYSFGVVLLELLSGR 230
P+ + S D++S G +L E+++G+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 15 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 69
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 70 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 126
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 127 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 31 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 85
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 86 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 142
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 143 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 31 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 85
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 86 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 142
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 143 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+K QN + ++ A K + +S + ++++ E+ L H N
Sbjct: 45 LGDGAFGKVYKA---QNK------ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VKL+ +N ++ EF G+++ + +P++ + L++LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH-- 152
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +I+RDLKA N+L + + KL+DFG+ + NT R +GT + APE V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGV-----SAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 206 --ATGHLTP---KSDVYSFGVVLLEL 226
T P K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 29 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 83
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 84 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 140
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 141 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 21 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P+G + L + + ++A LS+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYC 129
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 130 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 21 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 75
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 76 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 132
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 133 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 21 KNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVI 79
+ + ++++ +GEG G V T+ +G VA+K++ Q + EV+
Sbjct: 44 REYLANFIKIGEGSTGIVCIA---------TEKHTGKQVAVKKMDLRKQQRRELLFNEVV 94
Query: 80 YLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA 139
+ H+N+V + D +V EF+ G+L + + + T + + V
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVL 151
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
R LS+LH + VI+RD+K+ ++LL S+ KLSDFG +VGT +
Sbjct: 152 RALSYLH--NQGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYW 207
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
APE ++ + D++S G++++E++ G
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 28 LLGEGGFGCVFK--GWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I Q +A V I + A++ + L EV L +L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA--------VKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++KL +S + +V E G L + + ++ + S +I V G++++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYM 137
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H N+++RDLK N+LL+S + + K+ DFGL+ NT + RI GT Y AP
Sbjct: 138 H--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GTAYYIAP 192
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V G K DV+S GV+L LLSG
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 373 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 427
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 428 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 484
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 485 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 28 LLGEGGFGCVFK--GWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I Q +A V I + A++ + L EV L +L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA--------VKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++KL +S + +V E G L + + ++ + S +I V G++++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYM 137
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H N+++RDLK N+LL+S + + K+ DFGL+ NT + RI GT Y AP
Sbjct: 138 H--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GTAYYIAP 192
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V G K DV+S GV+L LLSG
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 20 LGKGKFGNVYLARERQSKF---------ILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI---DVARGL 142
H N+++L GY ++ L+ E+ P G++ L Q +S + A ++A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANAL 125
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
S+ H VI+RD+K N+LL SN K++DFG + P+ T + GT Y P
Sbjct: 126 SYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPP 179
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E + K D++S GV+ E L G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 15 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 69
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 70 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 126
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 127 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 374 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 428
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 429 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 485
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 486 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 23/242 (9%)
Query: 12 ASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH 71
+M K+ +F LLG+G FG V + +G A+K L+ E
Sbjct: 1 GAMDPKVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAK 51
Query: 72 KE---WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPIS 127
E +TE L RH L L Y ++ +RL V E+ G L HL R+ V
Sbjct: 52 DEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-- 108
Query: 128 WPTRVKI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
R + ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G +
Sbjct: 109 -EERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 165
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTL 245
T GT Y APE + D + GVV+ E++ GR ++D L E L
Sbjct: 166 T--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
Query: 246 VE 247
+E
Sbjct: 224 ME 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 9 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 63
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 64 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 120
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 121 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+K QN + ++ A K + +S + ++++ E+ L H N
Sbjct: 45 LGDGAFGKVYKA---QNK------ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VKL+ +N ++ EF G+++ + +P++ + L++LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH-- 152
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +I+RDLKA N+L + + KL+DFG+ + NT R +GT + APE V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGV-----SAKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 206 --ATGHLTP---KSDVYSFGVVLLEL 226
T P K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+K QN + ++ A K + +S + ++++ E+ L H N
Sbjct: 45 LGDGAFGKVYKA---QNK------ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VKL+ +N ++ EF G+++ + +P++ + L++LH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH-- 152
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +I+RDLKA N+L + + KL+DFG+ + NT R +GT + APE V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGV-----SAKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 206 --ATGHLTP---KSDVYSFGVVLLEL 226
T P K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 109/238 (45%), Gaps = 23/238 (9%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-- 73
+K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVA 53
Query: 74 -WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTR 131
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 54 HTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EER 109
Query: 132 VKI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G D +
Sbjct: 110 ARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 166
Query: 191 TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
T GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 167 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
D LG G FG V KG+ + K + V I + +A E L E + QL
Sbjct: 11 EDKELGSGNFGTVKKGY-----YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 65
Query: 85 RHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
+ +V++IG C E+++ +LV E G L +L + + + +++ V+ G+ +
Sbjct: 66 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKY 122
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH-VSTRIVGTRGYAAPE 203
L ++N ++RDL A NVLL + AK+SDFGL++ +N + T + APE
Sbjct: 123 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 204 YVATGHLTPKSDVYSFGVVLLELLS 228
+ + KSDV+SFGV++ E S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 17 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 125
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T +S GT Y PE +
Sbjct: 126 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMI 179
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEW-LTEVIYLGQLRH 86
+GEG +G VFK +G +VAIK+ L++E K+ L E+ L QL+H
Sbjct: 11 IGEGSYGVVFKC---------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGV-----QPISWPTRVKIAIDVAR 140
NLV L+ LV+E+ L E +++GV + I+W T +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQ 113
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
++F H N I+RD+K N+L+ + KL DFG AR TG + + V TR Y
Sbjct: 114 AVNFCHK--HNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDE-VATRWYR 169
Query: 201 APE-YVATGHLTPKSDVYSFGVVLLELLSG 229
+PE V P DV++ G V ELLSG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK----AESFQG-HKEWLTEVIYLG 82
LGEG F V+K D+NT +VAIK++K +E+ G ++ L E+ L
Sbjct: 17 FLGEGQFATVYKAR-DKNT--------NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RG 141
+L H N++ L+ N LV++FM + LE + K + P+ +K + + +G
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLE--VIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAA 201
L +LH +++RDLK +N+LLD N KL+DFGLA+ G V TR Y A
Sbjct: 125 LEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKS--FGSPNRAYXHQVVTRWYRA 180
Query: 202 PEYVATGHLTPKS-DVYSFGVVLLELL 227
PE + + D+++ G +L ELL
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 46 TFAPTKPG----SGIVVAIK---RLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSE 98
TF K G +G VA+K R K S + E+ L RH +++KL S
Sbjct: 23 TFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82
Query: 99 SDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLK 158
+ +V E++ G L +++ + G + ++ + + + H V++RDLK
Sbjct: 83 PTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCH--RHMVVHRDLK 138
Query: 159 ASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLT--PKSDV 216
NVLLD++ NAK++DFGL+ G+ S G+ YAAPE V +G L P+ D+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLYAGPEVDI 194
Query: 217 YSFGVVLLELLSGRRALDED 236
+S GV+L LL G D++
Sbjct: 195 WSCGVILYALLCGTLPFDDE 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 14 MISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQG 70
M + A ++F LG+G FG V+ Q+ F ++A+K L + E
Sbjct: 1 MKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGV 51
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPT 130
+ EV LRH N+++L GY ++ L+ E+ P G++ L + +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQR 109
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS 190
++A LS+ H VI+RD+K N+LL S K++DFG + P+ T
Sbjct: 110 TATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-- 165
Query: 191 TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
+ GT Y PE + K D++S GV+ E L G+
Sbjct: 166 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 23/237 (9%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE--- 73
K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRV 132
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERA 107
Query: 133 KI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G D + T
Sbjct: 108 RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT 164
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 23/237 (9%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE--- 73
K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRV 132
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERA 107
Query: 133 KI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G D + T
Sbjct: 108 RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT 164
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 16 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 125 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIK--RLKAESFQGHKEWLT 76
+ +NF +GEG +G V+K +N +G VVA+K RL E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L +L H N+VKL+ + LV+E + + L+ + + I P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ +GL+F H V++RDLK N+L+++ KL+DFGLAR T+ V T
Sbjct: 114 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE--VVT 169
Query: 197 RGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRAL 233
Y APE + + + D++S G + E+++ RRAL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 42 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 150
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 151 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 204
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK--AESFQGHKEWLTEVIYLGQLRH 86
+GEG +G V+K K G +VA+KR++ AE + E+ L +L H
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAI-DVARGLS 143
N+V LI LV+EFM K L+ L + G+Q +++KI + + RG++
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQD----SQIKIYLYQLLRGVA 133
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
H +++RDLK N+L++S+ KL+DFGLAR G T V T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 204 YV-ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + + D++S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE--- 73
K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRV 132
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERA 107
Query: 133 KI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G + T
Sbjct: 108 RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE--- 73
K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRV 132
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERA 107
Query: 133 KI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G + T
Sbjct: 108 RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 21 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 129
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 130 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 17 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 125
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 126 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPPEMI 179
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK--AESFQGHKEWLTEVIYLGQLRH 86
+GEG +G V+K K G +VA+KR++ AE + E+ L +L H
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAI-DVARGLS 143
N+V LI LV+EFM K L+ L + G+Q +++KI + + RG++
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQD----SQIKIYLYQLLRGVA 133
Query: 144 FLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
H +++RDLK N+L++S+ KL+DFGLAR G T V T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 204 YV-ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + + D++S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 21 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 129
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 130 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 21 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 129
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 130 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPPEMI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 33 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 141
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 142 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 195
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGI--VVAIKRLKAESFQGHKEWLT--EVIYLGQ 83
+LG+G FG VF GS + A+K LK + + T E L +
Sbjct: 31 VLGQGSFGKVF--------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 84 LRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+ H +VKL Y +++ +L L+ +F+ G L L K V + +A ++A L
Sbjct: 83 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELALAL 139
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
LH L +IYRDLK N+LLD + KL+DFGL+++ + D+ + GT Y AP
Sbjct: 140 DHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 195
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V T +D +SFGV++ E+L+G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 16 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 125 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 19 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 128 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 181
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 16 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 125 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 17 KIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE--- 73
K+ +F LLG+G FG V + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRV 132
+TE L RH L L Y ++ +RL V E+ G L HL R+ V R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERA 107
Query: 133 KI-AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
+ ++ L +LH D V+YRD+K N++LD + + K++DFGL ++G + T
Sbjct: 108 RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTLVE 247
GT Y APE + D + GVV+ E++ GR ++D L E L+E
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LGEG FG V T T+ + ++L +S H E+ YL LRH +
Sbjct: 17 LGEGSFGKV-----KLATHYKTQQKVALKFISRQLLKKS-DMHMRVEREISYLKLLRHPH 70
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
++KL + + ++V E+ G L +++ K R I A H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH-- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+++RDLK N+LLD N N K++DFGL+ G+ S G+ YAAPE V G
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VING 181
Query: 209 HLT--PKSDVYSFGVVLLELLSGRRALDED 236
L P+ DV+S G+VL +L GR D++
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 16 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 125 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 20 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 128
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 129 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 182
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 15 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 123
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 124 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 177
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGI--VVAIKRLKAESFQGHKEWLT--EVIYLGQ 83
+LG+G FG VF GS + A+K LK + + T E L +
Sbjct: 31 VLGQGSFGKVF--------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 84 LRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+ H +VKL Y +++ +L L+ +F+ G L L K V + +A ++A L
Sbjct: 83 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELALAL 139
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
LH L +IYRDLK N+LLD + KL+DFGL+++ + D+ + GT Y AP
Sbjct: 140 DHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 195
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V T +D +SFGV++ E+L+G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 19 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 128 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 181
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 76 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 123
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 181
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 182 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 236
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 41 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 88
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 146
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 147 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 201
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGI--VVAIKRLKAESFQGHKEWLT--EVIYLGQ 83
+LG+G FG VF GS + A+K LK + + T E L +
Sbjct: 32 VLGQGSFGKVF--------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 84 LRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+ H +VKL Y +++ +L L+ +F+ G L L K V + +A ++A L
Sbjct: 84 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELALAL 140
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
LH L +IYRDLK N+LLD + KL+DFGL+++ + D+ + GT Y AP
Sbjct: 141 DHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 196
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V T +D +SFGV++ E+L+G
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG V+KG ID +T VVAIK + E + E + E+ L Q
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ + G +S ++ E++ GS + L + G P+ I ++ +GL +LH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG--PLEETYIATILREILKGLDYLHS 134
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 208 GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRL 267
K+D++S G+ +EL G + D + L+ P L
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPP-NSDLHPMRVLFLIPKNSP-------------PTL 236
Query: 268 GGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
GQ+SK + CL+ DP+ RP+ ++L
Sbjct: 237 EGQHSKPFKEFVEA----CLNKDPRFRPTAKELL 266
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 61
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 174
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 61
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 174
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 46 TFAPTKPG----SGIVVAIK---RLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSE 98
TF K G +G VA+K R K S + E+ L RH +++KL S
Sbjct: 23 TFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82
Query: 99 SDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLK 158
+ +V E++ G L +++ + G + ++ + + + H V++RDLK
Sbjct: 83 PTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCH--RHMVVHRDLK 138
Query: 159 ASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLT--PKSDV 216
NVLLD++ NAK++DFGL+ G+ S G+ YAAPE V +G L P+ D+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLYAGPEVDI 194
Query: 217 YSFGVVLLELLSGRRALDED 236
+S GV+L LL G D++
Sbjct: 195 WSCGVILYALLCGTLPFDDE 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 17 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 64
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 122
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D ++ VGTR Y +PE
Sbjct: 123 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPER 177
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 61
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 174
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 61
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 174
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q F ++A+K L + E + EV LR
Sbjct: 13 LGKGKFGNVYLAREKQRKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 121
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ T + GT Y PE +
Sbjct: 122 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 175
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 21 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P+G + L + + ++A LS+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYC 129
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 130 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMI 183
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE- 87
LG G G VFK KP SG+V+A K + E + ++I Q+ HE
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIR---NQIIRELQVLHEC 61
Query: 88 NLVKLIGYCSE--SDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
N ++G+ SD + + E M GSL+ L + G P +V IA V +GL++
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L +++RD+K SN+L++S KL DFG++ G D+ ++ VGTR Y +PE
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 174
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGR 230
+ H + +SD++S G+ L+E+ GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG N + + S ++A+K L + E + EV LR
Sbjct: 16 LGKGKFG---------NVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY +S L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 125 HS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+K +G + A K ++ +S + ++++ E+ L H
Sbjct: 27 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VKL+G ++ EF P G+++ + + ++ P + + L+FLH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS- 135
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+I+RDLKA NVL+ + +L+DFG++ +GT + APE V
Sbjct: 136 -KRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 209 HL--TP---KSDVYSFGVVLLEL 226
+ TP K+D++S G+ L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 19 ATKNFCSDY-LLGEGGFG--CVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL 75
TKN Y +LG+GGFG C + +A +++ + + +G L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA--------CKKLEKKRIKKRKGEAMAL 232
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
E L ++ +V L D LV M G L+ H++ G V A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
++ GL LH ++YRDLK N+LLD + + ++SD GLA P G + R VG
Sbjct: 293 AEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGR-VG 347
Query: 196 TRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
T GY APE V T D ++ G +L E+++G+ + +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 20 LGKGKFGNVYLARERQSKF---------ILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI---DVARGL 142
H N+++L GY ++ L+ E+ P G++ L Q +S + A ++A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANAL 125
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
S+ H VI+RD+K N+LL SN K++DFG + P+ + GT Y P
Sbjct: 126 SYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPP 179
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E + K D++S GV+ E L G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G FG V+K +G + A K ++ +S + ++++ E+ L H
Sbjct: 19 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+VKL+G ++ EF P G+++ + + ++ P + + L+FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS- 127
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
+I+RDLKA NVL+ + +L+DFG++ +GT + APE V
Sbjct: 128 -KRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 209 HL--TP---KSDVYSFGVVLLEL 226
+ TP K+D++S G+ L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 19 ATKNFCSDY-LLGEGGFG--CVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL 75
TKN Y +LG+GGFG C + +A +++ + + +G L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA--------CKKLEKKRIKKRKGEAMAL 232
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
E L ++ +V L D LV M G L+ H++ G V A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
++ GL LH ++YRDLK N+LLD + + ++SD GLA P G + R VG
Sbjct: 293 AEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGR-VG 347
Query: 196 TRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
T GY APE V T D ++ G +L E+++G+ + +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 96 CSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIY 154
C ++ +RL V E++ G L H+ + V P V A ++A GL FL +IY
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQS--KGIIY 144
Query: 155 RDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKS 214
RDLK NV+LDS + K++DFG+ ++ T + GT Y APE +A
Sbjct: 145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 215 DVYSFGVVLLELLSGRRALD-EDRGGLAEQTL 245
D ++FGV+L E+L+G+ + ED L + +
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 57 VVAIKRLKAESFQGHKEWL-TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLE 115
+VAIK + E+ +G + + E+ L +++H N+V L + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL---LDSNFNAKL 172
+ + KG +R + V + +LH D +++RDLK N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASR--LIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
SDFGL++ D V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 L-DEDRGGLAEQTL---VEWADPFLRD 255
DE+ L EQ L E+ P+ D
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDD 244
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 31/306 (10%)
Query: 7 MSDPSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
MS+ S+++ I ++ ++G G V + AP K VAIKR+ E
Sbjct: 1 MSEDSSALPWSINRDDYELQEVIGSGATAVVQAAYC-----APKKEK----VAIKRINLE 51
Query: 67 SFQ-GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLEN---HLFRKG 122
Q E L E+ + Q H N+V D LV + + GS+ + H+ KG
Sbjct: 52 KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 111
Query: 123 VQP---ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR 179
+ T I +V GL +LH I+RD+KA N+LL + + +++DFG++
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169
Query: 180 DGPTGDN---THVSTRIVGTRGYAAPEYVATGH-LTPKSDVYSFGVVLLELLSGRRALDE 235
TG + V VGT + APE + K+D++SFG+ +EL +G +
Sbjct: 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 236 DRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRP 295
++ P L + D + +Y K + CL DP+ RP
Sbjct: 230 YPPMKVLMLTLQNDPPSLETG-----VQDKEMLKKYGKSFRKMISL----CLQKDPEKRP 280
Query: 296 SMVDVL 301
+ ++L
Sbjct: 281 TAAELL 286
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 18 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 126
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K+++FG + P+ T + GT Y PE +
Sbjct: 127 HS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMI 180
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 37 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 143
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 144 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWYR 196
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + +G+ VA+K+L +S K E+ L ++H
Sbjct: 37 VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 143
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 144 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWYR 196
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 96 CSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIY 154
C ++ +RL V E++ G L H+ + V P V A ++A GL FL +IY
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQS--KGIIY 465
Query: 155 RDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKS 214
RDLK NV+LDS + K++DFG+ ++ T + GT Y APE +A
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSV 523
Query: 215 DVYSFGVVLLELLSGRRALDEDRGGLAEQTLVE 247
D ++FGV+L E+L+G+ + + Q+++E
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA+K +L + S Q + EV + L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G+ YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 238
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA+K +L + S Q + EV + L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G+ YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 238
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 57 VVAIKRLKAESFQGHKEWL-TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLE 115
+VAIK + E+ +G + + E+ L +++H N+V L + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL---LDSNFNAKL 172
+ + KG +R + V + +LH D +++RDLK N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASR--LIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
SDFGL++ D V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 L-DEDRGGLAEQTL---VEWADPFLRD 255
DE+ L EQ L E+ P+ D
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDD 244
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 19 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K+++FG + P+ T + GT Y PE +
Sbjct: 128 HS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMI 181
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 18 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 126
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 127 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLDYLPPEMI 180
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 37 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 143
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 144 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWYR 196
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 42 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 150
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 151 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTLDYLPPEMI 204
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 57 VVAIKRLKAESFQGHKEWL-TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLE 115
+VAIK + E+ +G + + E+ L +++H N+V L + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL---LDSNFNAKL 172
+ + KG +R + V + +LH D +++RDLK N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASR--LIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
SDFGL++ D V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 L-DEDRGGLAEQTL---VEWADPFLRD 255
DE+ L EQ L E+ P+ D
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDD 244
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 35 IGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 141
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 142 GLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWYR 194
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 110
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 111 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 169 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 19 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 128 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLDYLPPEMI 181
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 19 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 127
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 128 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMI 181
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA+K +L + S Q + EV + L H N+VKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 71
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMK-EKEARAKFR-QIVSAVQYCH--QKFI 127
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G+ YAAPE + +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDG 184
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 231
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG VFKG ID T VVAIK + E + E + E+ L Q
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQ--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ K G + ++ E++ GS + L R G P + ++ +GL +LH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAG--PFDEFQIATMLKEILKGLDYLHS 138
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 139 --EKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
K+D++S G+ +EL G
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 17 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 125
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 126 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMI 179
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWLTEVIYLGQLR 85
LG+G FG V+ Q+ F ++A+K L + E + EV LR
Sbjct: 16 LGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+++L GY ++ L+ E+ P G++ L + + ++A LS+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYC 124
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H VI+RD+K N+LL S K++DFG + P+ + GT Y PE +
Sbjct: 125 HS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMI 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
K D++S GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 42 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 148
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 149 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 201
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L LRH+++ +L ++ +V E+ P G L +++ + + TRV +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD-RLSEEETRV-VF 114
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
+ ++++H +RDLK N+L D KL DFGL + H+ T G
Sbjct: 115 RQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCG 171
Query: 196 TRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
+ YAAPE + +L ++DV+S G++L L+ G D+D
Sbjct: 172 SLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD------------------ 213
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXL--QCLHMDPKNRPSMVDVLT 302
V+ + + G+Y + L Q L +DPK R SM ++L
Sbjct: 214 ---NVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 36 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 143 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 195
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX--QKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 35 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 141
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 142 GLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWYR 194
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 41 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 147
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 148 GLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWYR 200
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 35 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 141
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 142 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 194
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + SG+ +A+K+L +S K E+ L ++H
Sbjct: 59 VGSGAYGSVCSSY---------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 165
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 166 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 218
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 36 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 143 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 195
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 37 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 143
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 144 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 196
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWL 75
A ++F LG+G FG V+ Q+ F ++A+K L + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLR 56
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
EV LRH N+++L GY ++ L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 114
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
++A LS+ H VI+RD+K N+LL S K++DFG + P+ + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCG 168
Query: 196 TRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 32 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 138
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 139 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 191
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 35 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 141
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 142 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 194
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 29 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 135
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 136 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 188
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 41 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 147
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 148 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 200
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA+K +L + S Q + EV + L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX--QKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 19 ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQGHKEWL 75
A ++F LG+G FG V+ Q+ F ++A+K L + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLR 59
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
EV LRH N+++L GY ++ L+ E+ P G++ L + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI 117
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVG 195
++A LS+ H VI+RD+K N+LL S K++DFG + P+ + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCG 171
Query: 196 TRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 53 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 159
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 160 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 212
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 42 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 148
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 149 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 201
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 42 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 148
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 149 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 201
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 50 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 156
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 157 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 209
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 32 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 138
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 139 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 191
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
Y APE + H P DV+S G+VL +L+G D+ E +
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGXVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
++VKLIG +E + ++ E G L + L + + + + A ++ L++L
Sbjct: 72 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 129
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAAP 202
++RD+ A NVL+ SN KL DFGL+R ST ++G + AP
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTXXKASKGKLPIKWMAP 181
Query: 203 EYVATGHLTPKSDVYSFGVVLLELL 227
E + T SDV+ FGV + E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 32 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 138
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 139 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 191
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 49 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 155
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 156 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 208
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 27 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 133
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 134 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 186
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 36 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 143 GLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEM---TGYVATRWYR 195
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 72 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 128
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 180
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG VFKG ID T VVAIK + E + E + E+ L Q
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ K G + ++ E++ GS + L G P+ I ++ +GL +LH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 137
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 138 --EKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
K+D++S G+ +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 27 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 133
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 134 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 186
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 112
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 113 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 171 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA++ +L + S Q + EV + L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G+ YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 26 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 132
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 133 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 185
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 32 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 138
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 139 GLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEM---TGYVATRWYR 191
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 38/234 (16%)
Query: 12 ASMISKIATKNFCSDYLLGEGGFGCVFKG--WIDQNTFAPTKPGSGIVVAIKRLKAESFQ 69
A + K +F L+G GGFG VFK ID T+ IKR+K + +
Sbjct: 2 AHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTY-----------VIKRVKYNNEK 50
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIG------YCSESDNR----------LLVYEFMPKGS 113
+ EV L +L H N+V G Y E+ ++ + EF KG+
Sbjct: 51 AER----EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106
Query: 114 LENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLS 173
LE + ++ + + +++ + +G+ ++H +I RDLK SN+ L K+
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIG 164
Query: 174 DFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
DFGL + N R GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 165 DFGLV---TSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 28 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 134
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 135 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 187
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
E+ L HEN+VK G+ E + + L E+ G L + + P P +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--PDAQRFFH 111
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ +LHG+ + +RD+K N+LLD N K+SDFGLA + + ++ GT
Sbjct: 112 QLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 197 RGYAAPEYVA--TGHLTPKSDVYSFGVVLLELLSGRRALDE 235
Y APE + H P DV+S G+VL +L+G D+
Sbjct: 170 LPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 100 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 156
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 157 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 208
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 72 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 128
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 180
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 23 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 77 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 133
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 134 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 185
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 10 PSASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ 69
PS++ +K + +F ++G+G FG V + A+K L+ ++
Sbjct: 29 PSSNPHAKPSDFHFLK--VIGKGSFGKVLLA---------RHKAEEVFYAVKVLQKKAIL 77
Query: 70 GHKE---WLTEV-IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQP 125
KE ++E + L ++H LV L +D V +++ G L HL R+
Sbjct: 78 KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC-- 135
Query: 126 ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGD 185
P A ++A L +LH L N++YRDLK N+LLDS + L+DFGL ++ +
Sbjct: 136 FLEPRARFYAAEIASALGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193
Query: 186 NTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+T ++ GT Y APE + D + G VL E+L G
Sbjct: 194 ST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K S +++L E + + Q H
Sbjct: 20 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 74 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 130
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 131 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 182
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA++ +L + S Q + EV + L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G R K + + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G+ YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 75 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 131
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 132 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 183
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
++VKLIG +E + ++ E G L + L + + + + A ++ L++L
Sbjct: 452 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAAP 202
++RD+ A NVL+ SN KL DFGL+R ST ++G + AP
Sbjct: 510 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMAP 561
Query: 203 EYVATGHLTPKSDVYSFGVVLLELL 227
E + T SDV+ FGV + E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 57 VVAIKRLKAESFQGHKE--WL-TEVIYLGQLRHENLVKLIGYCSESDNRLL-VYEFMPKG 112
+ A+K +K E ++ W+ TE Q + + + C ++++RL V E++ G
Sbjct: 47 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 106
Query: 113 SLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKL 172
L H+ R+ P I +A L++LH + +IYRDLK NVLLDS + KL
Sbjct: 107 DLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKL 162
Query: 173 SDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRR 231
+D+G+ ++G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 163 TDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
Query: 232 ALD 234
D
Sbjct: 220 PFD 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 15 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGVQPISWPTRVKIAIDVARGLSFLH 146
++VKLIG +E + ++ E G L + L RK + + + A ++ L++L
Sbjct: 69 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 125
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAA 201
++RD+ A NVL+ SN KL DFGL+R ST ++G + A
Sbjct: 126 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMA 177
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELL 227
PE + T SDV+ FGV + E+L
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 15/195 (7%)
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR 131
++ EV + L H N+VKL LV E+ G + ++L G R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEAR 117
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVST 191
K + + + H +++RDLKA N+LLD + N K++DFG + + G+
Sbjct: 118 AKFR-QIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-- 172
Query: 192 RIVGTRGYAAPE-YVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWAD 250
G+ YAAPE + + P+ DV+S GV+L L+SG D Q L E +
Sbjct: 173 -FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRE 224
Query: 251 PFLRDSRRVLRIMDT 265
LR R+ M T
Sbjct: 225 RVLRGKYRIPFYMST 239
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG VFKG ID T VVAIK + E + E + E+ L Q
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ K G + ++ E++ GS + L G P+ I ++ +GL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
K+D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 57 VVAIKRLKAESFQGHKE--WL-TEVIYLGQLRHENLVKLIGYCSESDNRLL-VYEFMPKG 112
+ A+K +K E ++ W+ TE Q + + + C ++++RL V E++ G
Sbjct: 32 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 91
Query: 113 SLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKL 172
L H+ R+ P I +A L++LH + +IYRDLK NVLLDS + KL
Sbjct: 92 DLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKL 147
Query: 173 SDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRR 231
+D+G+ ++G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 148 TDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
Query: 232 ALD 234
D
Sbjct: 205 PFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 57 VVAIKRLKAESFQGHKE--WL-TEVIYLGQLRHENLVKLIGYCSESDNRLL-VYEFMPKG 112
+ A+K +K E ++ W+ TE Q + + + C ++++RL V E++ G
Sbjct: 36 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 95
Query: 113 SLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKL 172
L H+ R+ P I +A L++LH + +IYRDLK NVLLDS + KL
Sbjct: 96 DLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKL 151
Query: 173 SDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRR 231
+D+G+ ++G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 152 TDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
Query: 232 ALD 234
D
Sbjct: 209 PFD 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VAIK +L S Q + EV + L H N+VKL
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 76
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
L+ E+ G + ++L G R K + + + H +
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR-QIVSAVQYCH--QKRI 132
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G G+ YAAPE + +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDG 189
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 57 VVAIKRLKAESFQGHKEWL-TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLE 115
+VAIK + ++ +G + + E+ L +++H N+V L + L+ + + G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL---LDSNFNAKL 172
+ + KG +R + V + +LH D +++RDLK N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASR--LIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
SDFGL++ D V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 L-DEDRGGLAEQTL---VEWADPFLRD 255
DE+ L EQ L E+ P+ D
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDD 244
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 96 CSESDNRLL-VYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIY 154
C ++++RL V E++ G L H+ R+ P I +A L++LH + +IY
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIY 176
Query: 155 RDLKASNVLLDSNFNAKLSDFGLARDG-PTGDNTHVSTRIVGTRGYAAPEYVATGHLTPK 213
RDLK NVLLDS + KL+D+G+ ++G GD T + GT Y APE +
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGEDYGFS 233
Query: 214 SDVYSFGVVLLELLSGRRALD 234
D ++ GV++ E+++GR D
Sbjct: 234 VDWWALGVLMFEMMAGRSPFD 254
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 28 LLGE-GGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
++GE G FG V+K QN + ++ A K + +S + ++++ E+ L H
Sbjct: 16 IIGELGDFGKVYKA---QNK------ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 66
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
N+VKL+ +N ++ EF G+++ + +P++ + L++LH
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH 125
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV- 205
D +I+RDLKA N+L + + KL+DFG++ T +GT + APE V
Sbjct: 126 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN-TRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 206 -ATGHLTP---KSDVYSFGVVLLEL 226
T P K+DV+S G+ L+E+
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG VFKG ID T VVAIK + E + E + E+ L Q
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ K G + ++ E++ GS + L G P+ I ++ +GL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
K+D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 14/181 (7%)
Query: 54 SGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE-NLVKLIGYCSE--SDNRL-LVYEFM 109
SG+++A K + E + ++I Q+ HE N ++G+ SD + + E M
Sbjct: 40 SGLIMARKLIHLEIKPAIR---NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 96
Query: 110 PKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN 169
GSL+ L K + I K++I V RGL++L +++RD+K SN+L++S
Sbjct: 97 DGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGE 153
Query: 170 AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
KL DFG++ G D+ ++ VGTR Y APE + H + +SD++S G+ L+EL G
Sbjct: 154 IKLCDFGVS--GQLIDS--MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Query: 230 R 230
R
Sbjct: 210 R 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT-EVIYLGQLRHE 87
+G+G FG VFKG ID T VVAIK + E + E + E+ L Q
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+ K G + ++ E++ GS + L G P+ I ++ +GL +LH
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 142
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
I+RD+KA+NVLL + KL+DFG+A G D VGT + APE +
Sbjct: 143 --EKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
K+D++S G+ +EL G
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ D+GLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 124 QPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+PI+ + + VARG+ FL I+RDL A N+LL N K+ DFGLARD
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 184 GDNTHVSTRIVGTR---GYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGL 240
+ R TR + APE + + KSDV+S+GV+L E+ S GG
Sbjct: 252 NPDY---VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGG- 299
Query: 241 AEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDV 300
+ V+ + F R +R+ +YS E L C H DPK RP ++
Sbjct: 300 SPYPGVQMDEDFCSRLREGMRMR----APEYSTPEI---YQIMLDCWHRDPKERPRFAEL 352
Query: 301 LTSLEQL 307
+ L L
Sbjct: 353 VEKLGDL 359
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEVIYLGQLRHE 87
LG G FG V + + F K + VA+K LK + +K +TE+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 88 -NLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRK 121
N+V L+G C++ L+V E+ G+L N+L K
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTE 77
K + S +G G +G V ID+ SG VAIK+L + FQ K E
Sbjct: 42 KTYVSPTHVGSGAYGSVCSA-IDKR--------SGEKVAIKKL-SRPFQSEIFAKRAYRE 91
Query: 78 VIYLGQLRHENLVKLIGYCSESDNRLLVYEF---MPKGSLENHLFRKGVQPISWPTRVKI 134
++ L ++HEN++ L+ + + + Y+F MP ++ L + S +
Sbjct: 92 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGMEFSEEKIQYL 149
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ +GL ++H A V++RDLK N+ ++ + K+ DFGLAR H +
Sbjct: 150 VYQMLKGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMT 199
Query: 195 G---TRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
G TR Y APE + + H D++S G ++ E+L+G+
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 22/255 (8%)
Query: 58 VAIKRLKAESFQ-GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLEN 116
VAIKR+ E Q E L E+ + Q H N+V D LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 117 ---HLFRKGVQP---ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA 170
H+ KG + T I +V GL +LH I+RD+KA N+LL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 155
Query: 171 KLSDFGLARDGPTGDN---THVSTRIVGTRGYAAPEYVATGH-LTPKSDVYSFGVVLLEL 226
+++DFG++ TG + V VGT + APE + K+D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 227 LSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQC 286
+G + ++ P L + D + +Y K + C
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETG-----VQDKEMLKKYGKSFRKMISL----C 266
Query: 287 LHMDPKNRPSMVDVL 301
L DP+ RP+ ++L
Sbjct: 267 LQKDPEKRPTAAELL 281
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 100/234 (42%), Gaps = 27/234 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VAIK +L S Q + EV + L H N+VKL
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 79
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
L+ E+ G + ++L G R K + + + H +
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR-QIVSAVQYCH--QKRI 135
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G G YAAPE + +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDG 192
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIMDT 265
P+ DV+S GV+L L+SG D Q L E + LR R+ M T
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRIPFYMST 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 36 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 143 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 195
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 40 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 146
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 147 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 199
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF----QGH 71
K+ +NF +LG G +G VF + +G + A+K LK + +
Sbjct: 49 EKVGIENFELLKVLGTGAYGKVFL------VRKISGHDTGKLYAMKVLKKATIVQKAKTT 102
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPT 130
+ TE L +R + + Y +++ +L L+ +++ G L HL ++
Sbjct: 103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR---ERFTEH 159
Query: 131 RVKIAI-DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
V+I + ++ L LH L +IYRD+K N+LLDSN + L+DFGL+++ D T
Sbjct: 160 EVQIYVGEIVLALEHLHKL--GIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETER 216
Query: 190 STRIVGTRGYAAPEYVA---TGHLTPKSDVYSFGVVLLELLSG 229
+ GT Y AP+ V +GH D +S GV++ ELL+G
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H +++ LI S LV++ M KG L ++L K +S I + +SFL
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFL 216
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H N+++RDLK N+LLD N +LSDFG + G+ + GT GY APE +
Sbjct: 217 HA--NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEIL 271
Query: 206 ATGH------LTPKSDVYSFGVVLLELLSG 229
+ D+++ GV+L LL+G
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 50 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 156
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 157 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 209
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKS--QKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGL R T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 132
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 133 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 185
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 26/236 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL-TEVIYLGQLRHE 87
LG G F V A K +G + A+K + ++ +G + + E+ L +++HE
Sbjct: 30 LGTGAFSEV--------VLAEEK-ATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV-QPISWPTRVKIAIDVARGLSFLH 146
N+V L ++ LV + + G L + + KG T ++ +D + +LH
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLH 137
Query: 147 GLDANVIYRDLKASNVLL---DSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE 203
+ +++RDLK N+L D +SDFGL++ GD V + GT GY APE
Sbjct: 138 RM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPE 192
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQTL---VEWADPFLRD 255
+A + D +S GV+ LL G DE+ L EQ L E+ P+ D
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD 248
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 49 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 155
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T V TR Y
Sbjct: 156 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYR 208
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 21 KNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTE 77
K + S +G G +G V ID+ SG VAIK+L + FQ K E
Sbjct: 24 KTYVSPTHVGSGAYGSVCSA-IDKR--------SGEKVAIKKL-SRPFQSEIFAKRAYRE 73
Query: 78 VIYLGQLRHENLVKLIGYCSESDNRLLVYEF---MPKGSLENHLFRKGVQPISWPTRVKI 134
++ L ++HEN++ L+ + + + Y+F MP ++ L + S +
Sbjct: 74 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGLKFSEEKIQYL 131
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ +GL ++H A V++RDLK N+ ++ + K+ DFGLAR H +
Sbjct: 132 VYQMLKGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMT 181
Query: 195 G---TRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
G TR Y APE + + H D++S G ++ E+L+G+
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 53 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 159
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D V TR Y
Sbjct: 160 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---XGYVATRWYR 212
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 6 AMSDPS-ASMISKIATKNFCSDYL-LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL 63
++ DP A + K + SD +G G FG V+ FA S VVAIK++
Sbjct: 37 SLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVY--------FARDVRNSE-VVAIKKM 87
Query: 64 KAESFQGHKEW---LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
Q +++W + EV +L +LRH N ++ G LV E+ GS + L
Sbjct: 88 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLE 145
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD 180
+P+ + +GL++LH N+I+RD+KA N+LL KL DFG
Sbjct: 146 VHKKPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFG---- 199
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVAT---GHLTPKSDVYSFGVVLLEL 226
+ + VGT + APE + G K DV+S G+ +EL
Sbjct: 200 --SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 42/228 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLGQLR 85
LG+G +G V+K ID+ T G VVA+K++ ++FQ + E++ L +L
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 86 -HENLVKLIGYCSESDNR--LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
HEN+V L+ ++R LV+++M + L + ++P+ + + + + +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVH---KQYVVYQLIKVI 122
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT------------------- 183
+LH +++RD+K SN+LL++ + K++DFGL+R
Sbjct: 123 KYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 184 GDNTHVSTRIVGTRGYAAPEY-VATGHLTPKSDVYSFGVVLLELLSGR 230
D+ + T V TR Y APE + + T D++S G +L E+L G+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEW---LTEVIYLGQLR 85
+G G FG V+ FA S VVAIK++ Q +++W + EV +L +LR
Sbjct: 23 IGHGSFGAVY--------FARDVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N ++ G LV E+ GS + L +P+ + +GL++L
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H N+I+RD+KA N+LL KL DFG + + VGT + APE +
Sbjct: 132 HS--HNMIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPEVI 183
Query: 206 AT---GHLTPKSDVYSFGVVLLEL 226
G K DV+S G+ +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL 75
KI + F +LG+GG+G VF+ + + T A T + V K + + +
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK 69
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E L +++H +V LI Y ++ +L L+ E++ G L L R+G+ T
Sbjct: 70 AERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFY 126
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+++ L LH +IYRDLK N++L+ + KL+DFGL ++ D T V+
Sbjct: 127 LAEISMALGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFC 182
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
GT Y APE + D +S G ++ ++L+G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 44/300 (14%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+LG+G +G V+ G N + +AIK + + + E+ L+H+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL------FRKGVQPISWPTRVKIAIDVARG 141
N+V+ +G SE+ + E +P GSL L + Q I + T+ + G
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEG 134
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
L +LH D +++RD+K NVL+++ K+SDFG ++ G N T GT Y
Sbjct: 135 LKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTET-FTGTLQYM 190
Query: 201 APEYVATG--HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRR 258
APE + G +D++S G ++E+ +G+ E +P
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK------------PPFYELGEP----QAA 234
Query: 259 VLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTSKDMPRTPP 318
+ ++ ++ + + + L+C DP R D+L E L S +T P
Sbjct: 235 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD-EFLKVSSKKKKTQP 293
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL 75
KI + F +LG+GG+G VF+ + + T A T + V K + + +
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK 69
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E L +++H +V LI Y ++ +L L+ E++ G L L R+G+ T
Sbjct: 70 AERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFY 126
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+++ L LH +IYRDLK N++L+ + KL+DFGL ++ D T V+
Sbjct: 127 LAEISMALGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHTFC 182
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
GT Y APE + D +S G ++ ++L+G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT--EVIYLGQLR- 85
+GEG +G VFK +N G VA+KR++ ++ + T EV L L
Sbjct: 19 IGEGAYGKVFKARDLKN--------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 86 --HENLVKLIGYCSES----DNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
H N+V+L C+ S + +L LV+E + + L +L + + T + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
RGL FLH V++RDLK N+L+ S+ KL+DFGLAR T +V T
Sbjct: 130 LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLW 184
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELL 227
Y APE + D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ---GHKEWLTEVIYLGQL 84
+LG GGFG VF A +G + A K+L + + G++ + E L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFR-----KGVQPISWPTRVKIAIDV 138
H + + Y E+ L LV M G + H++ G Q P + +
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQI 298
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
GL LH N+IYRDLK NVLLD + N ++SD GLA + G + GT G
Sbjct: 299 VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPG 354
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
+ APE + D ++ GV L E+++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ---GHKEWLTEVIYLGQL 84
+LG GGFG VF A +G + A K+L + + G++ + E L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFR-----KGVQPISWPTRVKIAIDV 138
H + + Y E+ L LV M G + H++ G Q P + +
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQI 298
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
GL LH N+IYRDLK NVLLD + N ++SD GLA + G + GT G
Sbjct: 299 VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPG 354
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
+ APE + D ++ GV L E+++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ---GHKEWLTEVIYLGQL 84
+LG GGFG VF A +G + A K+L + + G++ + E L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFR-----KGVQPISWPTRVKIAIDV 138
H + + Y E+ L LV M G + H++ G Q P + +
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQI 298
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
GL LH N+IYRDLK NVLLD + N ++SD GLA + G + GT G
Sbjct: 299 VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPG 354
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
+ APE + D ++ GV L E+++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQ---GHKEWLTEVIYLGQL 84
+LG GGFG FA +G + A K+L + + G++ + E L ++
Sbjct: 192 VLGRGGFG---------EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 85 RHENLVKLIGYCSESDNRL-LVYEFMPKGSLENHLFR-----KGVQPISWPTRVKIAIDV 138
H + + Y E+ L LV M G + H++ G Q P + +
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQI 298
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
GL LH N+IYRDLK NVLLD + N ++SD GLA + G + GT G
Sbjct: 299 VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPG 354
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
+ APE + D ++ GV L E+++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 18/190 (9%)
Query: 54 SGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRHENLVKL-------IGYCSESDNRLL 104
+G VAIK++ + K L E+ L +H+N++ + + Y E + +
Sbjct: 79 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY-GEFKSVYV 137
Query: 105 VYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLL 164
V + M + H QP++ + RGL ++H A VI+RDLK SN+L+
Sbjct: 138 VLDLMES---DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--AQVIHRDLKPSNLLV 192
Query: 165 DSNFNAKLSDFGLARDGPT--GDNTHVSTRIVGTRGYAAPEYVATGH-LTPKSDVYSFGV 221
+ N K+ DFG+AR T ++ + T V TR Y APE + + H T D++S G
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 222 VLLELLSGRR 231
+ E+L+ R+
Sbjct: 253 IFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL--KAESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + +G VAIK++ + K L E+ L +H
Sbjct: 62 IGNGAYGVVSSA---------RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 87 ENLVKL-------IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA 139
+N++ + + Y E + +V + M + H QP++ +
Sbjct: 113 DNIIAIKDILRPTVPY-GEFKSVYVVLDLMES---DLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT--GDNTHVSTRIVGTR 197
RGL ++H A VI+RDLK SN+L++ N K+ DFG+AR T ++ + T V TR
Sbjct: 169 RGLKYMHS--AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 198 GYAAPEYVATGH-LTPKSDVYSFGVVLLELLSGRR 231
Y APE + + H T D++S G + E+L+ R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ FGLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 45/219 (20%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLE--------NHLFRKGVQPISWPTRVK----- 133
EN++ L+ F P SLE HL + I ++
Sbjct: 77 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQ 124
Query: 134 -IAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR 192
+ + RGL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D T
Sbjct: 125 FLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TG 177
Query: 193 IVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
V TR Y APE + H D++S G ++ ELL+GR
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---AGFVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT--EVIYLGQLR- 85
+GEG +G VFK +N G VA+KR++ ++ + T EV L L
Sbjct: 19 IGEGAYGKVFKARDLKN--------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 86 --HENLVKLIGYCSES----DNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
H N+V+L C+ S + +L LV+E + + L +L + + T + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
RGL FLH V++RDLK N+L+ S+ KL+DFGLAR T +V T
Sbjct: 130 LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLW 184
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELL 227
Y APE + D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---AGFVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 51/231 (22%)
Query: 28 LLGEGGFGCVFKG--WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
L+G GGFG VFK ID T+ I+R+K + + + EV L +L
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTY-----------VIRRVKYNNEKAER----EVKALAKLD 63
Query: 86 HENLVKLIG------YCSE-SDNRL----------------------LVYEFMPKGSLEN 116
H N+V G Y E SD+ L + EF KG+LE
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 117 HLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG 176
+ ++ + + +++ + +G+ ++H +I+RDLK SN+ L K+ DFG
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 177 LARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
L + N TR GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 182 LV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT--EVIYLGQLR- 85
+GEG +G VFK +N G VA+KR++ ++ + T EV L L
Sbjct: 19 IGEGAYGKVFKARDLKN--------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 86 --HENLVKLIGYCSES----DNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
H N+V+L C+ S + +L LV+E + + L +L + + T + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
RGL FLH V++RDLK N+L+ S+ KL+DFGLAR T +V T
Sbjct: 130 LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLW 184
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELL 227
Y APE + D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ D GLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 26 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 132
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D V TR Y
Sbjct: 133 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---AGFVATRWYR 185
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 42 IDQNTFAPTKPGSGIV----VAIK-----RLKAESFQGHKEWLTEVIYLGQLRHENLVKL 92
I + FA K I+ VA+K +L + S Q + EV L H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLNHPNIVKL 78
Query: 93 IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
LV E+ G + ++L G + R K + + + H +
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHG-RXKEKEARAKFR-QIVSAVQYCH--QKFI 134
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVATGHLT 211
++RDLKA N+LLD++ N K++DFG + + G+ G YAAPE + +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDG 191
Query: 212 PKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRV 259
P+ DV+S GV+L L+SG D Q L E + LR R+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD-------GQNLKELRERVLRGKYRI 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 39/297 (13%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK---EWLTEV 78
NF + +G G F V++ + G+ VA+K+++ K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLD---------GVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAI 136
L QL H N++K E + +V E G L + F+K + I T K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ L +H V++RD+K +NV + + KL D GL R T + +VGT
Sbjct: 144 QLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGT 199
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQT-LVEWAD--PFL 253
Y +PE + KSD++S G +L E+ + + D+ L +E D P
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP 259
Query: 254 RDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
D YS++ Q C++ DP+ RP + V +++H
Sbjct: 260 SD--------------HYSEELRQLVN----MCINPDPEKRPDVTYVYDVAKRMHAC 298
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G G V+ +G VAI+++ + + + E++ + + ++ N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V + D +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHS- 134
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
VI+RD+K+ N+LL + + KL+DFG T + + ST +VGT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRST-MVGTPYWMAPEVVTRK 191
Query: 209 HLTPKSDVYSFGVVLLELLSGR 230
PK D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ D GLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 46/228 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTE--VIYLGQLR 85
L+G G +G V+KG +D+ A +K SF + ++ E + + +
Sbjct: 20 LIGRGRYGAVYKGSLDERPVA--------------VKVFSFANRQNFINEKNIYRVPLME 65
Query: 86 HENLVKLI--GYCSESDNR---LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
H+N+ + I +D R LLV E+ P GSL +L + W + ++A V R
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTR 122
Query: 141 GLSFLHG-------LDANVIYRDLKASNVLLDSNFNAKLSDFGLA------RDGPTGDNT 187
GL++LH + +RDL + NVL+ ++ +SDFGL+ R G+
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS--------DVYSFGVVLLELL 227
+ + VGT Y APE V G + + D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
++VKLIG +E + ++ E G L + L + + + + A ++ L++L
Sbjct: 72 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 129
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAAP 202
++RD+ A NVL+ + KL DFGL+R ST ++G + AP
Sbjct: 130 --KRFVHRDIAARNVLVSATDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMAP 181
Query: 203 EYVATGHLTPKSDVYSFGVVLLELL 227
E + T SDV+ FGV + E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEG FG T+ G V+ + S + +E EV L ++H N
Sbjct: 32 IGEGSFGKAI-------LVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL-FRKGV-----QPISWPTRVKIAIDVARGL 142
+V+ E+ + +V ++ G L + +KGV Q + W ++ +A+
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 143 SFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H D +++RD+K+ N+ L + +L DFG+AR ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSGRRALD 234
E KSD+++ G VL EL + + A +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLRHE 87
+GEG FG V +G +P P + VAIK K + +E +L E + + Q H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
++VKLIG +E + ++ E G L + L + + + + A ++ L++L
Sbjct: 452 HIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG-----YAAP 202
++RD+ A NVL+ + KL DFGL+R ST ++G + AP
Sbjct: 510 --KRFVHRDIAARNVLVSATDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMAP 561
Query: 203 EYVATGHLTPKSDVYSFGVVLLELL 227
E + T SDV+ FGV + E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V A +G+ VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ D GLAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+MP G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D K++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 50 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 156
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DFGLAR T D V TR Y
Sbjct: 157 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---XGXVATRWYR 209
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+MP G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D K++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 26/251 (10%)
Query: 13 SMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK 72
SM + K F +LG G F VF + Q +G + A+K +K
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVF--LVKQRL-------TGKLFALKCIKKSPAFRDS 51
Query: 73 EWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV 132
E+ L +++HEN+V L + + LV + + G L + + +GV T
Sbjct: 52 SLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-----TEK 106
Query: 133 KIAIDVARGLSFLHGLDAN-VIYRDLKASNVLL---DSNFNAKLSDFGLARDGPTGDNTH 188
++ + + LS + L N +++RDLK N+L + N ++DFGL++ G
Sbjct: 107 DASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---- 162
Query: 189 VSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQT--- 244
+ + GT GY APE +A + D +S GV+ LL G +E L E+
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEG 222
Query: 245 LVEWADPFLRD 255
E+ PF D
Sbjct: 223 YYEFESPFWDD 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N+L
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIL 148
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 149 ISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 209 LYEVLTG 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLGQLR 85
LG+G FG V+ QN F ++A+K L + + E+ LR
Sbjct: 22 LGKGKFGNVYLAREKQNKF---------IMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++++ Y + L+ EF P+G L L + G ++A L +
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H + VI+RD+K N+L+ K++DFG + P+ + GT Y PE +
Sbjct: 131 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMI 184
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALD 234
K D++ GV+ E L G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+LG+G +G V+ G N + +AIK + + + E+ L+H+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHL------FRKGVQPISWPTRVKIAIDVARG 141
N+V+ +G SE+ + E +P GSL L + Q I + T+ + G
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEG 120
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
L +LH D +++RD+K NVL+++ K+SDFG ++ G N T GT Y
Sbjct: 121 LKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTET-FTGTLQYM 176
Query: 201 APEYVATG--HLTPKSDVYSFGVVLLELLSGR 230
APE + G +D++S G ++E+ +G+
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQLRH 86
+G G +G V + TK G VA+K+L +S K E+ L ++H
Sbjct: 30 VGSGAYGSVCAAF-------DTKTGHR--VAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 ENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
EN++ L+ + E ++ LV M G+ N++ + Q ++ + + R
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYA 200
GL ++H A++I+RDLK SN+ ++ + K+ DF LAR T D T V TR Y
Sbjct: 137 GLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEM---TGYVATRWYR 189
Query: 201 APEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
APE + H D++S G ++ ELL+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLGQLR 85
LG+G FG V+ QN F ++A+K L + + E+ LR
Sbjct: 23 LGKGKFGNVYLAREKQNKF---------IMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++++ Y + L+ EF P+G L L + G ++A L +
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 131
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H + VI+RD+K N+L+ K++DFG + P+ + GT Y PE +
Sbjct: 132 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMI 185
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALD 234
K D++ GV+ E L G D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G G V+ +G VAI+++ + + + E++ + + ++ N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V + D +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHS- 134
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGL-ARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
VI+RD+K+ N+LL + + KL+DFG A+ P + +VGT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTR 190
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
PK D++S G++ +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLGQLR 85
LG+G FG V+ QN F ++A+K L + + E+ LR
Sbjct: 22 LGKGKFGNVYLAREKQNKF---------IMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++++ Y + L+ EF P+G L L + G ++A L +
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 146 HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
H + VI+RD+K N+L+ K++DFG + P+ + GT Y PE +
Sbjct: 131 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMI 184
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRALD 234
K D++ GV+ E L G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G G V+ +G VAI+++ + + + E++ + + ++ N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V + D +V E++ GSL + + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHS- 135
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGL-ARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
VI+RD+K+ N+LL + + KL+DFG A+ P + +VGT + APE V
Sbjct: 136 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTR 191
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
PK D++S G++ +E++ G
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G G V+ +G VAI+++ + + + E++ + + ++ N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V + D +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHS- 134
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGL-ARDGPTGDNTHVSTRIVGTRGYAAPEYVAT 207
VI+RD+K+ N+LL + + KL+DFG A+ P + +VGT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTR 190
Query: 208 GHLTPKSDVYSFGVVLLELLSGR 230
PK D++S G++ +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G+G G V+ +G VAI+++ + + + E++ + + ++ N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V + D +V E++ GSL + + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLHS- 135
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
VI+R++K+ N+LL + + KL+DFG T + + ST +VGT + APE V
Sbjct: 136 -NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRST-MVGTPYWMAPEVVTRK 192
Query: 209 HLTPKSDVYSFGVVLLELLSGR 230
PK D++S G++ +E++ G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIM 148
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 209 LYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIM 148
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 209 LYEVLTG 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEG G V A K SG VA+K + Q + EV+ + +H N
Sbjct: 53 IGEGSTGIV--------CLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V++ + ++ EF+ G+L + + + + T + V + L++LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT---VCEAVLQALAYLHA- 159
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
VI+RD+K+ ++LL + KLSDFG + +VGT + APE ++
Sbjct: 160 -QGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRS 216
Query: 209 HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRV 259
+ D++S G++++E++ G D A + L + P L++S +V
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKV 267
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIM 148
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 209 LYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIM 148
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 209 LYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+V E++ +L + + +G P++ +++ D + L+F H +I+RD+K +N++
Sbjct: 110 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIM 165
Query: 164 LDSNFNAKLSDFGLARD-GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVV 222
+ + K+ DFG+AR +G++ + ++GT Y +PE + +SDVYS G V
Sbjct: 166 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 223 LLELLSG 229
L E+L+G
Sbjct: 226 LYEVLTG 232
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D K++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+ P G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+++D K++DFGLA+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 75 LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
L EV L QL H N++KL + + N LV E G L + + + Q S I
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVI 109
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVST 191
V G ++LH N+++RDLK N+LL+S K+ DFGL+ G +
Sbjct: 110 MKQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKE 165
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
R+ GT Y APE V K DV+S GV+L LL G
Sbjct: 166 RL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 75 LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
L EV L QL H N++KL + + N LV E G L + + + Q S I
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVI 126
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVST 191
V G ++LH N+++RDLK N+LL+S K+ DFGL+ G
Sbjct: 127 MKQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---K 181
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+GT Y APE V K DV+S GV+L LL G
Sbjct: 182 ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 58 VAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENH 117
+ I R + S + + L EV L L H N++KL + + N LV E G L +
Sbjct: 67 IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126
Query: 118 LF-RKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLS 173
+ R + +K V G+++LH N+++RDLK N+LL+S K+
Sbjct: 127 IIHRMKFNEVDAAVIIK---QVLSGVTYLHK--HNIVHRDLKPENLLLESKEKDALIKIV 181
Query: 174 DFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
DFGL+ +N +GT Y APE V K DV+S GV+L LL+G
Sbjct: 182 DFGLS---AVFENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 26/188 (13%)
Query: 53 GSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSE--SDNRLLVYEFMP 110
G+ IVV + +++ S + +++ E L H N++ ++G C + + L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 111 KGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA 170
GSL N L + VK A+D+ARG++FLH L+ + L + +V++D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 171 KLS--DFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPK--------SDVYSFG 220
++S D + P R Y AP +VA L K +D++SF
Sbjct: 153 RISMADVKFSFQSP-------------GRMY-APAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 221 VVLLELLS 228
V+L EL++
Sbjct: 199 VLLWELVT 206
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N FA VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG--HKEWLTEVIYLGQLRH 86
+GEG +G VFK + +VA+KR++ + L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+N+V+L LV+EF + L+ + F + + +GL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
NV++RDLK N+L++ N KL+DFGLAR G + V T Y P+ +
Sbjct: 119 S--RNVLHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 207 TGHLTPKS-DVYSFGVVLLELLSGRRAL 233
L S D++S G + EL + R L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N FA VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N FA VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+ P G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D K++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 56
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 57 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 109
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 224
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 285 ALRIKKTLSQL 295
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 86
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 144
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
LD +IYRDLK N+L+D +++DFG A+ T + GT Y APE +
Sbjct: 145 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEIIL 197
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
LD +IYRDLK N+L+D +++DFG A+ T + GT Y APE +
Sbjct: 160 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEIIL 212
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E+ P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D K++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 12 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 57
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 58 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 110
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 111 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 170
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 171 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 225
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 226 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 285
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 286 ALRIKKTLSQL 296
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
+LG G FG V K + +G+ +A K +K + +E E+ + QL H
Sbjct: 96 ILGGGRFGQVHKC---------EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
NL++L ++ +LV E++ G L + + + T + + G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT-ILFMKQICEGIRHMHQ 205
Query: 148 LDANVIYRDLKASNVLLDSNFNAK---LSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
+ +++ DLK N+L N +AK + DFGLAR + V+ GT + APE
Sbjct: 206 M--YILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEV 259
Query: 205 VATGHLTPKSDVYSFGVVLLELLSG 229
V ++ +D++S GV+ LLSG
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 17 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 62
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 63 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 115
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 175
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 176 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 230
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 231 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 290
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 291 ALRIKKTLSQL 301
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 181
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 182 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 231
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 15 ISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEW 74
+ +AT + +G G +G V+K P SG VA+K ++ + G
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGG 53
Query: 75 LT-----EVIYLGQLR---HENLVKLIGYC--SESDNRL---LVYEFMPKGSLENHLFRK 121
L EV L +L H N+V+L+ C S +D + LV+E + + L +L +
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA 112
Query: 122 GVQPISWPTRVKIAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNAKLSDFGLARD 180
+ T + RGL FLH AN +++RDLK N+L+ S KL+DFGLAR
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLAR- 168
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
T +V T Y APE + D++S G + E+
Sbjct: 169 --IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 14 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 59
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 60 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 112
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 113 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 172
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 173 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 227
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 228 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 287
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 288 ALRIKKTLSQL 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+ P G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+++D +++DFGLA+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G S P A + +LH L
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 153
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTRGYAAPEYVA 206
D +IYRDLK N+L+D +++DFG A+ G T + GT Y APE +
Sbjct: 154 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIIL 204
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E+ P G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+++D K++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 37 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 82
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 83 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 135
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 136 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 195
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 196 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 250
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 251 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 310
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 311 ALRIKKTLSQL 321
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 58/311 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLRH 86
+G+G FG V++G G VA+K S + + W E+ LRH
Sbjct: 50 IGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRH 95
Query: 87 ENLVKLIGYCSESDNR--------LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
EN++ I +DN+ LV ++ GSL ++L R V +K+A+
Sbjct: 96 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 148
Query: 139 ARGLSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVS- 190
A GL+ LH G + +RDLK+ N+L+ N ++D GLA R D ++
Sbjct: 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 208
Query: 191 TRIVGTRGYAAPEY----VATGHLTP--KSDVYSFGVVLLELLSGRRALDEDRGGLAEQT 244
VGT+ Y APE + H ++D+Y+ G+V E+ RR GG+ E
Sbjct: 209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC---SIGGIHEDY 263
Query: 245 LVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEAQXXXXXXL-QCLHMDPKNRPS 296
+ + +DP + + R+V+ R + ++ EA + +C + + R +
Sbjct: 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 323
Query: 297 MVDVLTSLEQL 307
+ + +L QL
Sbjct: 324 ALRIKKTLSQL 334
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 63 LKAESFQGHKEW-LTEVIYLGQLR-HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
AE Q +E L EV L ++ H N+++L + LV++ M KG L ++L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 104
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD 180
K +S KI + + LH L N+++RDLK N+LLD + N KL+DFG +
Sbjct: 105 KVT--LSEKETRKIMRALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGH------LTPKSDVYSFGVVLLELLSG 229
G+ + GT Y APE + + D++S GV++ LL+G
Sbjct: 161 LDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE 73
+ I + + +LG+G FG V K I A V I + + + +
Sbjct: 44 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECA--------VKVISKRQVKQKTDKES 95
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVK 133
L EV L QL H N++KL + + LV E G L + + + + S +
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 153
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTH-- 188
I V G++++H +++RDLK N+LL+S + N ++ DFGL+ TH
Sbjct: 154 IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFE 203
Query: 189 VSTRI---VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
S ++ +GT Y APE V G K DV+S GV+L LLSG
Sbjct: 204 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 32/267 (11%)
Query: 11 SASMISKIATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
+A S+ F + + G+G FG V G + +G+ VAIK++ +
Sbjct: 13 AADERSRKEMDRFQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFR 63
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGY---CSESDNRLL----VYEFMPKG--SLENHLFRK 121
++E L + L L H N+V+L Y E D R + V E++P + +R+
Sbjct: 64 NRE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRR 122
Query: 122 GVQPISWPTRVKIAI-DVARGLSFLHGLDANVIYRDLKASNVLL-DSNFNAKLSDFGLAR 179
V P P +K+ + + R + LH NV +RD+K NVL+ +++ KL DFG A+
Sbjct: 123 QVAPP--PILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
Query: 180 D-GPTGDNTHVSTRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
P+ N + +R Y APE + H T D++S G + E++ G R
Sbjct: 181 KLSPSEPN----VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF---R 233
Query: 238 GGLAEQTLVEWADPFLRDSRRVLRIMD 264
G + L E SR VLR ++
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLRKLN 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 16 SKIATKNFCSDYLLGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE 73
+ I + + +LG+G FG V K I A V I + + + +
Sbjct: 45 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECA--------VKVISKRQVKQKTDKES 96
Query: 74 WLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVK 133
L EV L QL H N++KL + + LV E G L + + + + S +
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 154
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTH-- 188
I V G++++H +++RDLK N+LL+S + N ++ DFGL+ TH
Sbjct: 155 IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFE 204
Query: 189 VSTRI---VGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
S ++ +GT Y APE V G K DV+S GV+L LLSG
Sbjct: 205 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 28 LLGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I A V I + + + + L EV L QL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECA--------VKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++KL + + LV E G L + + + + S +I V G++++
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYM 142
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTH--VSTRI---VGTR 197
H +++RDLK N+LL+S + N ++ DFGL+ TH S ++ +GT
Sbjct: 143 HK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTA 192
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y APE V G K DV+S GV+L LLSG
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 63 LKAESFQGHKEW-LTEVIYLGQLR-HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
AE Q +E L EV L ++ H N+++L + LV++ M KG L ++L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 117
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD 180
K +S KI + + LH L N+++RDLK N+LLD + N KL+DFG +
Sbjct: 118 KVT--LSEKETRKIMRALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGH------LTPKSDVYSFGVVLLELLSG 229
G+ + GT Y APE + + D++S GV++ LL+G
Sbjct: 174 LDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 27 YLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWL-TEVIYLGQL 84
Y +G G +G K + G ++ K L S + K+ L +EV L +L
Sbjct: 12 YTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 85 RHENLVKLIGYCSESDNRLL--VYEFMPKGSLENHLFR--KGVQPISWPTRVKIAIDVAR 140
+H N+V+ + N L V E+ G L + + + K Q + +++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 141 GLSFLHGLD---ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
L H V++RDLK +NV LD N KL DFGLAR +T + VGT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTP 180
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
Y +PE + KSD++S G +L EL +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 27 YLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWL-TEVIYLGQL 84
Y +G G +G K + G ++ K L S + K+ L +EV L +L
Sbjct: 12 YTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 85 RHENLVKLIGYCSESDNRLL--VYEFMPKGSLENHLFR--KGVQPISWPTRVKIAIDVAR 140
+H N+V+ + N L V E+ G L + + + K Q + +++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 141 GLSFLHGLD---ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
L H V++RDLK +NV LD N KL DFGLAR +T + VGT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTP 180
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
Y +PE + KSD++S G +L EL +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 28 LLGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I A V I + + + + L EV L QL
Sbjct: 39 VLGKGSFGEVILCKDKITGQECA--------VKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N++KL + + LV E G L + + + + S +I V G++++
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYM 148
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H +++RDLK N+LL+S + N ++ DFGL+ +GT Y AP
Sbjct: 149 H--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAP 203
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V G K DV+S GV+L LLSG
Sbjct: 204 E-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 55 GIVVAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLV 105
GI VA+K+L + FQ K E++ L + H+N++ L+ + E + LV
Sbjct: 47 GINVAVKKL-SRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 106 YEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLD 165
E M + + +S+ + + G+ LH A +I+RDLK SN+++
Sbjct: 106 MELMDANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVK 158
Query: 166 SNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE 225
S+ K+ DFGLAR T + T V TR Y APE + D++S G ++ E
Sbjct: 159 SDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 226 LLSG 229
L+ G
Sbjct: 216 LVKG 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 63 LKAESFQGHKEW-LTEVIYLGQLR-HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFR 120
AE Q +E L EV L ++ H N+++L + LV++ M KG L ++L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 117
Query: 121 KGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARD 180
K +S KI + + LH L N+++RDLK N+LLD + N KL+DFG +
Sbjct: 118 KVT--LSEKETRKIMRALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 181 GPTGDNTHVSTRIVGTRGYAAPEYVATGH------LTPKSDVYSFGVVLLELLSG 229
G+ + GT Y APE + + D++S GV++ LL+G
Sbjct: 174 LDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E+ P G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 55 GIVVAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLV 105
GI VA+K+L + FQ K E++ L + H+N++ L+ + E + LV
Sbjct: 49 GINVAVKKL-SRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 106 YEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLD 165
E M + + +S+ + + G+ LH A +I+RDLK SN+++
Sbjct: 108 MELMDANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVK 160
Query: 166 SNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE 225
S+ K+ DFGLAR T + T V TR Y APE + D++S G ++ E
Sbjct: 161 SDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 226 LLSG 229
L+ G
Sbjct: 218 LVKG 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEG +G V+K QN + T I RL+ E + E+ L +L+H N
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSN 61
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VKL +LV+E + + L+ L G++ + T + + G+++ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH 117
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV- 205
D V++RDLK N+L++ K++DFGLAR G T V T Y AP+ +
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEG +G V+K QN + T I RL+ E + E+ L +L+H N
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSN 61
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VKL +LV+E + + L+ L G++ + T + + G+++ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH 117
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV- 205
D V++RDLK N+L++ K++DFGLAR G T V T Y AP+ +
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-WLTEVIYLGQLR 85
LG GGFG VF K +D +A IKR++ + + +E + EV L +L
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYA-----------IKRIRLPNRELAREKVMREVKALAKLE 61
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSL--ENHLFRK--------GVQPISWPTR---V 132
H +V+ E + + PK L + L RK G I R +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL--ARDGPTGDNTHVS 190
I + +A + FLH +++RDLK SN+ + K+ DFGL A D + T ++
Sbjct: 122 HIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 191 --------TRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
T VGT+ Y +PE + + K D++S G++L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
L KL ++ N +V E+ P G + +HL R G S P A + +LH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D K++DFG A+ V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 49/238 (20%)
Query: 23 FCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEV 78
+ SD+ +LG+G FG V K +N AIK+++ + + L+EV
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIR-HTEEKLSTILSEV 53
Query: 79 IYLGQLRHE-------------NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQP 125
+ L L H+ N VK + + + E+ G+L + + + +
Sbjct: 54 MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ 113
Query: 126 ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGP--- 182
++ + LS++H +I+RDLK N+ +D + N K+ DFGLA++
Sbjct: 114 -QRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 183 ------------TGDNTHVSTRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELL 227
+ DN T +GT Y A E + TGH K D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNL---TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+GEG +G V+K QN + T I RL+ E + E+ L +L+H N
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSN 61
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHL--FRKGVQPISWPTRVKIAIDVARGLSFLH 146
+VKL +LV+E + + L+ L G++ + T + + G+++ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH 117
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV- 205
D V++RDLK N+L++ K++DFGLAR G T + T Y AP+ +
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
L KL ++ N +V E+ P G + +HL R G S P A + +LH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D K++DFG A+ V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G P A + +LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++P G + +HL R G P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 30/236 (12%)
Query: 8 SDPSASMISKI--------ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVA 59
SDP ++ + +I K + LG+GGF ++ D +T + +G VV
Sbjct: 5 SDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYE-ITDMDT---KEVFAGKVVP 60
Query: 60 IKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHL 118
K + + Q K TE+ L + ++V G+ + D +V E + SL E H
Sbjct: 61 -KSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 118
Query: 119 FRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLA 178
RK V + P +G+ +LH + VI+RDLK N+ L+ + + K+ DFGLA
Sbjct: 119 RRKAV---TEPEARYFMRQTIQGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
Query: 179 R----DGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
DG + + GT Y APE + + + D++S G +L LL G+
Sbjct: 174 TKIEFDGERKKD------LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E+ P G + +HL R G P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D K++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG--HKEWLTEVIYLGQLRH 86
+GEG +G VFK + +VA+KR++ + L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+N+V+L LV+EF + L+ + F + + +GL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
NV++RDLK N+L++ N KL++FGLAR G + V T Y P+ +
Sbjct: 119 S--RNVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 207 TGHLTPKS-DVYSFGVVLLELLSGRRAL 233
L S D++S G + EL + R L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++P G + +HL R G P A + +LH L
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 153
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTRGYAAPEYVA 206
D +IYRDLK N+L+D +++DFG A+ G T + GT Y APE +
Sbjct: 154 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIIL 204
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 181
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG 208
D +IYRDLK N+L+D +++DFG A+ T + GT Y APE + +
Sbjct: 182 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSK 234
Query: 209 HLTPKSDVYSFGVVLLELLSG 229
D ++ GV++ E+ +G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPT 130
H+E E+ L L H N++KL + LV EF G L + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECD 147
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSN---FNAKLSDFGLARDGPTGDNT 187
I + G+ +LH N+++RD+K N+LL++ N K+ DFGL+ +
Sbjct: 148 AANIMKQILSGICYLHK--HNIVHRDIKPENILLENKNSLLNIKIVDFGLS--SFFSKDY 203
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ R+ GT Y APE V K DV+S GV++ LL G
Sbjct: 204 KLRDRL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 27 YLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESF-QGHKEWL-TEVIYLGQL 84
Y +G G +G K + G ++ K L S + K+ L +EV L +L
Sbjct: 12 YTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 85 RHENLVKLIGYCSESDNRLL--VYEFMPKGSLENHLFR--KGVQPISWPTRVKIAIDVAR 140
+H N+V+ + N L V E+ G L + + + K Q + +++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 141 GLSFLHGLD---ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
L H V++RDLK +NV LD N KL DFGLAR + + VGT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVGTP 180
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
Y +PE + KSD++S G +L EL +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 34/220 (15%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG GG G VF +D + VAIK++ Q K L E+ + +L H+N
Sbjct: 19 LGCGGNGLVFSA-VDNDCDKR--------VAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 89 LVKL--------------IGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
+VK+ +G +E ++ +V E+M + L N + +G P+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLAN-VLEQG--PLLEEHARLF 125
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDS-NFNAKLSDFGLAR--DGPTGDNTHVST 191
+ RGL ++H ANV++RDLK +N+ +++ + K+ DFGLAR D H+S
Sbjct: 126 MYQLLRGLKYIHS--ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 192 RIVGTRGYAAPEYVAT-GHLTPKSDVYSFGVVLLELLSGR 230
+V T+ Y +P + + + T D+++ G + E+L+G+
Sbjct: 184 GLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 46 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 99
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 156
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVSTRIVGTRGYAAPEYV 205
VI+RDLK N+ L+ + K+ DFGLA + G+ V + GT Y APE +
Sbjct: 157 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + + DV+S G ++ LL G+
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLV-YEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA 139
+ +L H VKL +C + D +L + G L ++ + G + TR A ++
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIV 147
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGY 199
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT Y
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 200 AAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+PE + SD+++ G ++ +L++G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 22 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 75
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 132
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVSTRIVGTRGYAAPEYV 205
VI+RDLK N+ L+ + K+ DFGLA + G+ V + GT Y APE +
Sbjct: 133 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 187
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + + DV+S G ++ LL G+
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 48 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 101
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLA-RDGPTGDNTHVSTRIVGTRGYAAPEYV 205
VI+RDLK N+ L+ + K+ DFGLA + G+ V + GT Y APE +
Sbjct: 159 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 213
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + + DV+S G ++ LL G+
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK-EWLTEVIYLGQLRHE 87
LGEG + V+KG + +VA+K ++ E +G + EV L L+H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
N+V L + LV+E++ K L+ +L G I+ + RGL++ H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCH- 117
Query: 148 LDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPE-YVA 206
V++RDLK N+L++ KL+DFGLAR T+ + V T Y P+ +
Sbjct: 118 -RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE--VVTLWYRPPDILLG 174
Query: 207 TGHLTPKSDVYSFGVVLLELLSGR 230
+ + + D++ G + E+ +GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT- 76
+AT + +G G +G V+K P SG VA+K ++ + + T
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 77 -EVIYLGQLR---HENLVKLIGYC--SESDNRL---LVYEFMPKGSLENHLFRKGVQPIS 127
EV L +L H N+V+L+ C S +D + LV+E + + L +L + +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 128 WPTRVKIAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
T + RGL FLH AN +++RDLK N+L+ S KL+DFGLAR
Sbjct: 111 AETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
+V T Y APE + D++S G + E+
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 6 AMSDPSASMISKI--------ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIV 57
A DP ++ + +I K + LG+GGF ++ D +T + +G V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYE-ITDMDT---KEVFAGKV 74
Query: 58 VAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-EN 116
V K + + Q K TE+ L + ++V G+ + D +V E + SL E
Sbjct: 75 VP-KSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 117 HLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG 176
H RK V + P +G+ +LH + VI+RDLK N+ L+ + + K+ DFG
Sbjct: 133 HKRRKAV---TEPEARYFMRQTIQGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 177 LAR----DGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGR 230
LA DG + + GT Y APE + + + D++S G +L LL G+
Sbjct: 188 LATKIEFDGERKKD------LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 35/214 (16%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLGQLR 85
+G G +G V +D T G VAIK+L FQ K E+ L +R
Sbjct: 33 VGSGAYGAVCSA-VDGRT--------GAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMR 82
Query: 86 HENLVKLIGYCSESD------NRLLVYEFMPK--GSLENHLFRKGVQPISWPTRVKIAID 137
HEN++ L+ + + + LV FM G L H + G I + +
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLGEDRIQF-----LVYQ 136
Query: 138 VARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTR 197
+ +GL ++H A +I+RDLK N+ ++ + K+ DFGLAR ++ + +V TR
Sbjct: 137 MLKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQA----DSEMXGXVV-TR 189
Query: 198 GYAAPEYVATG-HLTPKSDVYSFGVVLLELLSGR 230
Y APE + T D++S G ++ E+++G+
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 58 VAIKRLKA--ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSES------DNRLLVYEFM 109
VA+K+L +S + E+ L L+HEN++ L+ + + LV M
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 110 PKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN 169
G+ N++ + Q +S + + RGL ++H A +I+RDLK SNV ++ +
Sbjct: 108 --GADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDCE 161
Query: 170 AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLS 228
++ DFGLAR T V TR Y APE + H D++S G ++ ELL
Sbjct: 162 LRILDFGLARQA-----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 216
Query: 229 GR 230
G+
Sbjct: 217 GK 218
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
LVKL ++ N +V E++ G + +HL R G S P A + +LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+L+D +++DFG A+ V R + GT Y APE
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 139/331 (41%), Gaps = 53/331 (16%)
Query: 6 AMSDPSASMISKI--------ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIV 57
A DP ++ + +I K + LG+GGF ++ D +T + +G V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYE-ITDMDT---KEVFAGKV 74
Query: 58 VAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-EN 116
V K + + Q K TE+ L + ++V G+ + D +V E + SL E
Sbjct: 75 VP-KSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 117 HLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG 176
H RK V + P +G+ +LH + VI+RDLK N+ L+ + + K+ DFG
Sbjct: 133 HKRRKAV---TEPEARYFMRQTIQGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 177 LARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDED 236
LA + + GT Y APE + + + D++S G +L LL G+ +
Sbjct: 188 LATK--IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET- 244
Query: 237 RGGLAEQTLV-----EWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDP 291
++T + E++ P R V + R+ LH DP
Sbjct: 245 --SCLKETYIRIKKNEYSVP--RHINPVASALIRRM-------------------LHADP 281
Query: 292 KNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
RPS+ ++LT ++ TS P P + L
Sbjct: 282 TLRPSVAELLT--DEFFTSGYAPMRLPTSCL 310
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 111/279 (39%), Gaps = 36/279 (12%)
Query: 26 DYLLGEGGFG----CVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYL 81
D LGEG F CV K + + + KR++A + KE +
Sbjct: 16 DKPLGEGSFSICRKCVHK---------KSNQAFAVKIISKRMEANT---QKEITALKLCE 63
Query: 82 GQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARG 141
G H N+VKL + + LV E + G L + +K + S I +
Sbjct: 64 G---HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSA 118
Query: 142 LSFLHGLDANVIYRDLKASNVLL---DSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+S +H D V++RDLK N+L + N K+ DFG AR P DN + T T
Sbjct: 119 VSHMH--DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLH 174
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRR 258
YAAPE + D++S GV+L +LSG+ L + VE +
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM--------K 226
Query: 259 VLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSM 297
++ D G+ K +Q L +DP R M
Sbjct: 227 KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 161
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 6 AMSDPSASMISKI--------ATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIV 57
A DP ++ + +I K + LG+GGF ++ D +T + +G V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYE-ITDMDT---KEVFAGKV 74
Query: 58 VAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-EN 116
V K + + Q K TE+ L + ++V G+ + D +V E + SL E
Sbjct: 75 VP-KSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 117 HLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG 176
H RK V + P +G+ +LH + VI+RDLK N+ L+ + + K+ DFG
Sbjct: 133 HKRRKAV---TEPEARYFMRQTIQGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFG 187
Query: 177 LARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDED 236
LA D T + GT Y APE + + + D++S G +L LL G+ +
Sbjct: 188 LATKI-EFDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET- 244
Query: 237 RGGLAEQTLV-----EWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDP 291
++T + E++ P R V + R+ LH DP
Sbjct: 245 --SCLKETYIRIKKNEYSVP--RHINPVASALIRRM-------------------LHADP 281
Query: 292 KNRPSMVDVLTSLEQLHTSKDMPRTPPPAKL 322
RPS+ ++LT ++ TS P P + L
Sbjct: 282 TLRPSVAELLT--DEFFTSGYAPMRLPTSCL 310
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 25/220 (11%)
Query: 18 IATKNFCSDYL-----LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRL---KAESFQ 69
I T++F D LG+G FG N + + S +VA+K L + E
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFG---------NVYLAREKKSHFIVALKVLFKSQIEKEG 65
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
+ E+ L H N+++L Y + L+ E+ P+G L L +
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQ 123
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
I ++A L + HG VI+RD+K N+LL K++DFG + P+
Sbjct: 124 RTATIMEELADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR--- 178
Query: 190 STRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ GT Y PE + K D++ GV+ ELL G
Sbjct: 179 -KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 24 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
VI+RDLK N+ L+ + K+ DFGLA + + GT Y APE ++
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK--VEYDGERKKTLCGTPNYIAPEVLS 190
Query: 207 TGHLTPKSDVYSFGVVLLELLSGR 230
+ + DV+S G ++ LL G+
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 29 LGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
LG G FG V K N +A VV +K+++ L E L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
L KL ++ N +V E+ P G + +HL R G P A + +LH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 159
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPE 203
LD +IYRDLK N+++D K++DFG A+ V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 204 YVATGHLTPKSDVYSFGVVLLELLSG 229
+ + D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ ++F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQGKAFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT- 76
+AT + +G G +G V+K P SG VA+K ++ + + T
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 77 -EVIYLGQLR---HENLVKLIGYC--SESDNRL---LVYEFMPKGSLENHLFRKGVQPIS 127
EV L +L H N+V+L+ C S +D + LV+E + + L +L + +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 128 WPTRVKIAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
T + RGL FLH AN +++RDLK N+L+ S KL+DFGLAR
Sbjct: 111 AETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
+V T Y APE + D++S G + E+
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 24 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 134
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
VI+RDLK N+ L+ + K+ DFGLA + + GT Y APE ++
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK--VEYDGERKKTLCGTPNYIAPEVLS 190
Query: 207 TGHLTPKSDVYSFGVVLLELLSGR 230
+ + DV+S G ++ LL G+
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
LG+GGF F + + A TK + K L + Q K + E+ L H+
Sbjct: 28 FLGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQ 81
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
++V G+ ++D +V E + SL E H RK ++ P + G +LH
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLH 138
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
VI+RDLK N+ L+ + K+ DFGLA + + GT Y APE ++
Sbjct: 139 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK--VEYDGERKKTLCGTPNYIAPEVLS 194
Query: 207 TGHLTPKSDVYSFGVVLLELLSGR 230
+ + DV+S G ++ LL G+
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 58 VAIKRLKA--ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSES------DNRLLVYEFM 109
VA+K+L +S + E+ L L+HEN++ L+ + + LV M
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 110 PKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN 169
G+ N++ + Q +S + + RGL ++H A +I+RDLK SNV ++ +
Sbjct: 116 --GADLNNIVKS--QALSDEHVQFLVYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDSE 169
Query: 170 AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLS 228
++ DFGLAR T V TR Y APE + H D++S G ++ ELL
Sbjct: 170 LRILDFGLARQA-----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 229 GR 230
G+
Sbjct: 225 GK 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 28 LLGEGGFGCVF--KGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
+LG+G FG V K I A V I + + + + L EV L QL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECA--------VKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFL 145
H N+ KL + + LV E G L + + + + S +I V G+++
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYX 142
Query: 146 HGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTRI-----VGTR 197
H +++RDLK N+LL+S + N ++ DFGL+ TH +GT
Sbjct: 143 HK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKXKDKIGTA 192
Query: 198 GYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y APE V G K DV+S GV+L LLSG
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ ++F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQGKAFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 147
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 148 D--LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 197
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 198 LSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 41/226 (18%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLR 85
+G+G +G V++G W G VA+K + Q W TE+ LR
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSSRDEQS---WFRETEIYNTVLLR 60
Query: 86 HENLVKLIGYCSESDNR----LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARG 141
H+N++ I S N L+ + GSL + L R+ ++P +++A+ A G
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACG 117
Query: 142 LSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG-DNTHVSTR-I 193
L+ LH G + +RD K+ NVL+ SN ++D GLA G D +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 194 VGTRGYAAPEYVATGHLT------PKSDVYSFGVVLLELLSGRRAL 233
VGT+ Y APE + T +D+++FG+VL E+ RR +
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 18 IATKNFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT- 76
+AT + +G G +G V+K P SG VA+K ++ + + T
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 77 -EVIYLGQLR---HENLVKLIGYC--SESDNRL---LVYEFMPKGSLENHLFRKGVQPIS 127
EV L +L H N+V+L+ C S +D + LV+E + + L +L + +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 128 WPTRVKIAIDVARGLSFLHGLDAN-VIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDN 186
T + RGL FLH AN +++RDLK N+L+ S KL+DFGLAR
Sbjct: 111 AETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 164
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
+V T Y APE + D++S G + E+
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 58 VAIKRLKA--ESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSES------DNRLLVYEFM 109
VA+K+L +S + E+ L L+HEN++ L+ + + LV M
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 110 PKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN 169
G+ N++ + Q +S + + RGL ++H A +I+RDLK SNV ++ +
Sbjct: 116 --GADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDSE 169
Query: 170 AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATG-HLTPKSDVYSFGVVLLELLS 228
++ DFGLAR T V TR Y APE + H D++S G ++ ELL
Sbjct: 170 LRILDFGLARQA-----DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 229 GR 230
G+
Sbjct: 225 GK 226
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 35/309 (11%)
Query: 14 MISKIATKNFCSDYLLGEGGFGCVFKGWI----DQNTFAPTKPGSGIVVAIKRLKAESFQ 69
+ KI ++ + LG+G F +FKG D T+ ++ R +ESF
Sbjct: 1 VFHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF- 59
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
+ +L H++LV G C D +LV EF+ GSL+ +L +K I+
Sbjct: 60 -----FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINIL 113
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
++++A +A + FL + +I+ ++ A N+LL + K + + G + V
Sbjct: 114 WKLEVAKQLAAAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 190 STR-IVGTR-GYAAPEYVAT-GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLV 246
+ I+ R + PE + +L +D +SFG L E+ SG D+ L
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---DKPLSAL------ 222
Query: 247 EWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQ 306
DS+R L+ + R Q +A C+ +P +RPS ++ L
Sbjct: 223 --------DSQRKLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272
Query: 307 LHTSKDMPR 315
L T +PR
Sbjct: 273 LFTPDLVPR 281
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 35/309 (11%)
Query: 14 MISKIATKNFCSDYLLGEGGFGCVFKGWI----DQNTFAPTKPGSGIVVAIKRLKAESFQ 69
+ KI ++ + LG+G F +FKG D T+ ++ R +ESF
Sbjct: 1 VFHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF- 59
Query: 70 GHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWP 129
+ +L H++LV G C D +LV EF+ GSL+ +L +K I+
Sbjct: 60 -----FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINIL 113
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHV 189
++++A +A + FL + +I+ ++ A N+LL + K + + G + V
Sbjct: 114 WKLEVAKQLAWAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 190 STR-IVGTR-GYAAPEYVAT-GHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLV 246
+ I+ R + PE + +L +D +SFG L E+ SG D+ L
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---DKPLSAL------ 222
Query: 247 EWADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQ 306
DS+R L+ + R Q +A C+ +P +RPS ++ L
Sbjct: 223 --------DSQRKLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272
Query: 307 LHTSKDMPR 315
L T +PR
Sbjct: 273 LFTPDLVPR 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+++D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 ISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ ++F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQGKAFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEV-IYLGQLRH 86
+G G +G V K KP SG ++A+KR+++ + K+ L ++ + +
Sbjct: 30 IGRGAYGSVNK--------MVHKP-SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVARGLSF 144
+V+ G + + E M + + + V P + KI + + L+
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
L + +I+RD+K SN+LLD + N KL DFG++ G D+ TR G R Y APE
Sbjct: 141 LKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPER 196
Query: 205 V----ATGHLTPKSDVYSFGVVLLELLSGR 230
+ + +SDV+S G+ L EL +GR
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVARG 141
L+H ++V+L+ S +V+EFM L + ++ + V +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNA---KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L + H D N+I+RD+K NVLL S N+ KL DFG+A G++ V+ VGT
Sbjct: 143 LRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPH 198
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V DV+ GV+L LLSG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G + P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S GV
Sbjct: 157 IVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 29 LGEGGFGCV---FKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGH---KEWLTEVIYLG 82
+G G G V + +D+N VAIK+L + FQ K E++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------------VAIKKL-SRPFQNQTHAKRAYRELVLMK 78
Query: 83 QLRHENLVKLIGYCS------ESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
+ H+N++ L+ + E + LV E M + + +S+ +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLY 133
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGT 196
+ G+ LH A +I+RDLK SN+++ S+ K+ DFGLAR T + + T V T
Sbjct: 134 QMLXGIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVT 188
Query: 197 RGYAAPEYVATGHLTPKSDVYSFGVVLLE------LLSGRRALDE 235
R Y APE + D++S G ++ E L GR +D+
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 61/317 (19%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR-H 86
+L EGGF V++ GSG A+KRL + + ++ + EV ++ +L H
Sbjct: 35 VLAEGGFAFVYEA---------QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH 85
Query: 87 ENLVKLIGYCS----ESDN---RLLVYEFMPKGSLENHLFR-KGVQPISWPTRVKIAIDV 138
N+V+ S ESD L+ + KG L L + + P+S T +KI
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--------DGPTGDNTHVS 190
R + +H +I+RDLK N+LL + KL DFG A V
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 191 TRIV--GTRGYAAPEYVATGHLTP---KSDVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
I T Y PE + P K D+++ G +L LL R+
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQ-------------- 250
Query: 246 VEWADPFLRDSRRVLRIMDTRLGGQYS--KKEAQXXXXXXL--QCLHMDPKNRPSMVDVL 301
PF ++ LRI++ G+YS + Q L L ++P+ R S+ +V+
Sbjct: 251 ----HPFEDGAK--LRIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
Query: 302 TSLEQLHTSKDM-PRTP 317
L+++ ++++ P++P
Sbjct: 301 HQLQEIAAARNVNPKSP 317
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 80
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 137
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 138 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 192
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 193 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 236
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S GV
Sbjct: 157 IVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ ++ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 100
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 157
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 158 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 212
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 213 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 256
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 91
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 148
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 149 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 203
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 204 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 247
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 106
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 163
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 164 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 218
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 219 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 106
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 163
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 164 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 218
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 219 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 41/293 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEV-IYLGQLRH 86
LG G +G V ++ P SG ++A+KR++A + Q K L ++ I + +
Sbjct: 59 LGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKG--SLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
V G + + E M + KG Q I KIA+ + + L
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEH 168
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
LH +VI+RD+K SNVL+++ K+ DFG++ G D+ T G + Y APE
Sbjct: 169 LHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKTIDAGCKPYMAPER 224
Query: 205 V-----ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRRV 259
+ G+ + KSD++S G+ ++EL R D W PF +++
Sbjct: 225 INPELNQKGY-SVKSDIWSLGITMIELAILRFPYD------------SWGTPF----QQL 267
Query: 260 LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLT-SLEQLHTSK 311
++++ + K + QCL + K RP+ +++ LH SK
Sbjct: 268 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK 320
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 49/238 (20%)
Query: 23 FCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEV 78
+ SD+ +LG+G FG V K +N AIK+++ + + L+EV
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIR-HTEEKLSTILSEV 53
Query: 79 IYLGQLRHE-------------NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQP 125
+ L L H+ N VK + + + E+ +L + + + +
Sbjct: 54 MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ 113
Query: 126 ISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGP--- 182
++ + LS++H +I+RDLK N+ +D + N K+ DFGLA++
Sbjct: 114 -QRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 183 ------------TGDNTHVSTRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELL 227
+ DN T +GT Y A E + TGH K D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNL---TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 77
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 134
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 135 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 189
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 190 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 233
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 108
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 165
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 166 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 220
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 221 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 264
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 67/315 (21%)
Query: 8 SDPSASMISKIATKNFCSDYLLGEGGFGC-VFKGWIDQNTFAPTKPGSGIVVAIKRLKAE 66
+ S ++ KI+ FC +LG G G V++G D VA+KR+ E
Sbjct: 14 EETSVVIVGKIS---FCPKDVLGHGAEGTIVYRGMFDNRD-----------VAVKRILPE 59
Query: 67 SFQGHKEWLTEVIYLGQL-RHENLVKLIGYCSESDNRLLVYEF-MPKGSLENHLFRK--- 121
F EV L + H N+++ +C+E D + + +L+ ++ +K
Sbjct: 60 CFSFADR---EVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFA 114
Query: 122 --GVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLD-----SNFNAKLSD 174
G++PI+ + GL+ LH L N+++RDLK N+L+ A +SD
Sbjct: 115 HLGLEPIT------LLQQTTSGLAHLHSL--NIVHRDLKPHNILISMPNAHGKIKAMISD 166
Query: 175 FGLARDGPTGDNTHVSTR--IVGTRGYAAPEYVATG---HLTPKSDVYSFGVVLLELLSG 229
FGL + G ++ S R + GT G+ APE ++ + T D++S G V ++S
Sbjct: 167 FGLCKKLAVGRHS-FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS- 224
Query: 230 RRALDEDRGGLAEQTLVEWADPFLRDSRRVLRIM--DTRLGGQYSKKEAQXXXXXXLQ-C 286
E + PF + +R I+ L + +K ++
Sbjct: 225 -----------------EGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKM 267
Query: 287 LHMDPKNRPSMVDVL 301
+ MDP+ RPS VL
Sbjct: 268 IAMDPQKRPSAKHVL 282
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 85
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 142
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 143 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 197
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 198 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 241
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 73
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 130
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 131 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 185
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 186 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 84
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 141
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 142 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 196
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 197 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 84
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 141
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 142 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 196
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 197 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 72
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 129
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 130 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 184
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 185 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 95 YCSESDNRLL--VYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANV 152
+C+ D++ L V E+MP G L N + V P W +V L +H + +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFY--TAEVVLALDAIHSM--GL 195
Query: 153 IYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT----G 208
I+RD+K N+LLD + + KL+DFG H T VGT Y +PE + + G
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGTPDYISPEVLKSQGGDG 254
Query: 209 HLTPKSDVYSFGVVLLELLSG 229
+ + D +S GV L E+L G
Sbjct: 255 YYGRECDWWSVGVFLFEMLVG 275
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G P A + +LH L
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 155
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 156 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 205
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 151
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 208
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 209 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 263
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 264 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 307
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 110
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 167
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 168 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC 222
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 223 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 266
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 76 TEVIYLGQLRHENLVKLIGY----CSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTR 131
TE+ +RHEN++ I L+ ++ GSL ++L + S
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKS---M 136
Query: 132 VKIAIDVARGLSFLH-------GLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG 184
+K+A GL LH G A + +RDLK+ N+L+ N ++D GLA
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKF-IS 194
Query: 185 DNTHV----STRIVGTRGYAAPEYVAT----GHLTP--KSDVYSFGVVLLELLSGRRALD 234
D V +TR VGT+ Y PE + H +D+YSFG++L E+ RR +
Sbjct: 195 DTNEVDIPPNTR-VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVS 251
Query: 235 EDRGGLAEQTLVEW-----ADPFLRDSRRVLRIMDTR--LGGQYSKKEA-QXXXXXXLQC 286
GG+ E+ + + +DP D R ++ I R ++S E + +C
Sbjct: 252 ---GGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC 308
Query: 287 LHMDPKNRPSMVDVLTSLEQLHTSKDM 313
+P +R + + V +L ++ S+D+
Sbjct: 309 WAHNPASRLTALRVKKTLAKMSESQDI 335
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G P A + +LH L
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSL 181
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y APE +
Sbjct: 182 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 231
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 45 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 104 MDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHS--AGIIHRDLKPSNIVVKSDX 156
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 157 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 214 HKILFPGRDYIDQ 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG V++ + SG +VAIK+ L+ + F+ E+ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNR-----ELQIMRKLDH 76
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKG--SLENHLFR-KGVQPISWPTRVKIAI- 136
N+V+L + S + LV +++P+ + H R K P+ + VK+ +
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMY 133
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVG 195
+ R L+++H + +RD+K N+LLD + KL DFG A+ G+ + +
Sbjct: 134 QLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 188
Query: 196 TRGYAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+R Y APE + AT + T DV+S G VL ELL G+ D G
Sbjct: 189 SRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGDSG 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHS--AGIIHRDLKPSNIVVKSDX 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 229 G 229
G
Sbjct: 221 G 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 29/233 (12%)
Query: 23 FCSDYLL----GEGGFG----CVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEW 74
F DY L G+G F CV K PT+ + ++ K+L A + H++
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKK--------TPTQEYAAKIINTKKLSA---RDHQKL 77
Query: 75 LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E L+H N+V+L SE LV++ + G L + + + S
Sbjct: 78 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHC 135
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVST 191
+ ++ +H D +++RDLK N+LL S KL+DFGLA +
Sbjct: 136 IHQILESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGEQQAWF 191
Query: 192 RIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
GT GY +PE + D+++ GV+L LL G DED+ L +Q
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 244
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 53 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 111
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 112 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 164
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E++
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
Query: 229 G 229
G
Sbjct: 222 G 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDX 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 90 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 149 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 201
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 202 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 259 HKILFPGRDYIDQ 271
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLXQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDX 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 229 G 229
G
Sbjct: 221 G 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 53 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 112 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 164
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 222 HKILFPGRDYIDQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 45 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 104 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 156
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 157 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 214 HKILFPGRDYIDQ 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 90 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 149 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 201
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 202 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 259 HKILFPGRDYIDQ 271
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 53 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 112 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 164
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 222 HKILFPGRDYIDQ 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 46 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 105 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 157
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 215 HKILFPGRDYIDQ 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 51 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 110 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 162
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 163 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 219
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 220 HKILFPGRDYIDQ 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + LV E
Sbjct: 46 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 105 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 157
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 215 HKILFPGRDYIDQ 227
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT Y AP +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPAII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S G
Sbjct: 157 IVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL-RH 86
L+G G +G V+KG +G + AIK + + +E E+ L + H
Sbjct: 31 LVGNGTYGQVYKG---------RHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHH 80
Query: 87 ENLVKLIGYCSES------DNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
N+ G + D LV EF GS+ + + + I ++ R
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVSTRIVGTRG 198
GLS LH VI+RD+K NVLL N KL DFG++ D G +GT
Sbjct: 141 GLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR----NTFIGTPY 194
Query: 199 YAAPEYVATGH-----LTPKSDVYSFGVVLLELLSG 229
+ APE +A KSD++S G+ +E+ G
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S G
Sbjct: 157 IVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 229 G 229
G
Sbjct: 221 G 221
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 63 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 118
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 119 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + +G+ A K +K + + ++ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+++H N++ L + +L+ E + G L + L K + ++ + + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGV 127
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+LH L + + DLK N+ LLD N K+ DFGLA G+ I GT
Sbjct: 128 YYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPA 182
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRR 258
+ APE V L ++D++S GV+ LLSG A PFL D+++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPFLGDTKQ 223
Query: 259 V----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
+ ++ +Y + + L DPK R ++ D L
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 43/294 (14%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTEV-IYLGQLRH 86
LG G +G V ++ P SG ++A+KR++A + Q K L ++ I + +
Sbjct: 15 LGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKG--SLENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
V G + + E M + KG Q I KIA+ + + L
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEH 124
Query: 145 LHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI-VGTRGYAAPE 203
LH +VI+RD+K SNVL+++ K+ DFG++ G D+ V+ I G + Y APE
Sbjct: 125 LHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDD--VAKDIDAGCKPYMAPE 179
Query: 204 YV-----ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRR 258
+ G+ + KSD++S G+ ++EL R D W PF ++
Sbjct: 180 RINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD------------SWGTPF----QQ 222
Query: 259 VLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTS-LEQLHTSK 311
+ ++++ + K + QCL + K RP+ +++ LH SK
Sbjct: 223 LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK 276
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 64 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 119
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 120 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 61 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 116
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 117 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL 114
VAIK+L + FQ K E++ + + H+N++ L+ F P+ SL
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSL 98
Query: 115 ENH---LFRKGVQPISWPTRVKIAIDVAR----------GLSFLHGLDANVIYRDLKASN 161
E + + +++ +D R G+ LH A +I+RDLK SN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS--AGIIHRDLKPSN 156
Query: 162 VLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGV 221
+++ S+ K+ DFGLAR T + + T V TR Y APE + D++S G
Sbjct: 157 IVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 222 VLLELLSG 229
++ E++ G
Sbjct: 214 IMGEMIKG 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 62 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 117
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 118 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 40/218 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-----WLTEVIYLGQ 83
+G+G FG VFK +G VA+K++ E+ KE L E+ L
Sbjct: 25 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 72
Query: 84 LRHENLVKLIGYC---SESDNRL-----LVYEFMPK---GSLENHLFRKGVQPISWPTRV 132
L+HEN+V LI C + NR LV++F G L N L + + I
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 127
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH---V 189
++ + GL ++H +++RD+KA+NVL+ + KL+DFGLAR N+
Sbjct: 128 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 190 STRIVGTRGYAAPE-YVATGHLTPKSDVYSFGVVLLEL 226
R+V T Y PE + P D++ G ++ E+
Sbjct: 186 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H N++KL LV E + G L + + KG S
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY--SERDAADAV 154
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDS---NFNAKLSDFGLARDGPTGDNTHVSTR 192
+ +++LH + +++RDLK N+L + + K++DFGL++ ++ +
Sbjct: 155 KQILEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKT 209
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRG 238
+ GT GY APE + P+ D++S G++ LL G ++RG
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 40/218 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-----WLTEVIYLGQ 83
+G+G FG VFK +G VA+K++ E+ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 84 LRHENLVKLIGYC---SESDNRL-----LVYEFMPK---GSLENHLFRKGVQPISWPTRV 132
L+HEN+V LI C + NR LV++F G L N L + + I
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH---V 189
++ + GL ++H +++RD+KA+NVL+ + KL+DFGLAR N+
Sbjct: 129 RVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 190 STRIVGTRGYAAPE-YVATGHLTPKSDVYSFGVVLLEL 226
R+V T Y PE + P D++ G ++ E+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 84 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 139
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 140 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 68 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 123
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 124 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 40/218 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-----WLTEVIYLGQ 83
+G+G FG VFK +G VA+K++ E+ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 84 LRHENLVKLIGYC---SESDNRL-----LVYEFMP---KGSLENHLFRKGVQPISWPTRV 132
L+HEN+V LI C + NR LV++F G L N L + + I
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH---V 189
++ + GL ++H +++RD+KA+NVL+ + KL+DFGLAR N+
Sbjct: 129 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 190 STRIVGTRGYAAPE-YVATGHLTPKSDVYSFGVVLLEL 226
R+V T Y PE + P D++ G ++ E+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 84 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 139
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 140 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 87 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 142
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 143 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 87 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 142
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 143 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 84 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 139
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 140 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 84 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 139
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 140 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 54 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 113 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 165
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLS 228
K+ DFGLAR T + + V TR Y APE + D++S G ++ E++
Sbjct: 166 TLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
Query: 229 G 229
G
Sbjct: 223 G 223
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 83 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 138
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 139 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 40/218 (18%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE-----WLTEVIYLGQ 83
+G+G FG VFK +G VA+K++ E+ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 84 LRHENLVKLIGYC---SESDNRL-----LVYEFMPK---GSLENHLFRKGVQPISWPTRV 132
L+HEN+V LI C + NR LV++F G L N L + + I
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 133 KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTH---V 189
++ + GL ++H +++RD+KA+NVL+ + KL+DFGLAR N+
Sbjct: 129 RVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 190 STRIVGTRGYAAPE-YVATGHLTPKSDVYSFGVVLLEL 226
R+V T Y PE + P D++ G ++ E+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 89 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 144
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 145 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 62/313 (19%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLR 85
+G+G +G V++G W +N VA+K S + K W TE+ LR
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIF---SSRDEKSWFRETELYNTVMLR 60
Query: 86 HENLVKLIG---YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARG 141
HEN++ I S +L L+ + GSL ++L + +S ++I + +A G
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASG 117
Query: 142 LSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-------RDGPTGDNTH 188
L+ LH G + +RDLK+ N+L+ N ++D GLA G+N
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 189 VSTRIVGTRGYAAPEY------VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAE 242
VGT+ Y APE V + D+++FG+VL E+ RR + G+ E
Sbjct: 178 -----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVE 227
Query: 243 QTL-----VEWADPFLRDSRRVLRIMDTR---LGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
V DP D R+V+ + R +S +C + +P R
Sbjct: 228 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 295 PSMVDVLTSLEQL 307
+ + + +L ++
Sbjct: 288 LTALRIKKTLTKI 300
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVI 79
N+ +L+G G +G V+ + D+NT VAIK++ E K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY-DKNTEKN--------VAIKKVNRMFEDLIDCKRILREIT 77
Query: 80 YLGQLRHENLVKLIGYCSESD----NRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
L +L+ + +++L D + L + + L+ LF+ + + I
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKT-IL 135
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS----- 190
++ G +F+H ++ +I+RDLK +N LL+ + + K+ DFGLAR + +T++
Sbjct: 136 YNLLLGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEE 193
Query: 191 ---------------TRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLS 228
T V TR Y APE + KS D++S G + ELL+
Sbjct: 194 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 62/313 (19%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLR 85
+G+G +G V++G W +N VA+K S + K W TE+ LR
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIF---SSRDEKSWFRETELYNTVMLR 60
Query: 86 HENLVKLIG---YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARG 141
HEN++ I S +L L+ + GSL ++L + +S ++I + +A G
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASG 117
Query: 142 LSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-------RDGPTGDNTH 188
L+ LH G + +RDLK+ N+L+ N ++D GLA G+N
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 189 VSTRIVGTRGYAAPEY------VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAE 242
VGT+ Y APE V + D+++FG+VL E+ RR + G+ E
Sbjct: 178 -----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVE 227
Query: 243 QTL-----VEWADPFLRDSRRVLRIMDTR---LGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
V DP D R+V+ + R +S +C + +P R
Sbjct: 228 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 295 PSMVDVLTSLEQL 307
+ + + +L ++
Sbjct: 288 LTALRIKKTLTKI 300
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 83 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 138
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 139 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 120
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 216
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLK-AESFQGHKEWLTEV-IYLGQLRH 86
LGE G G + W + F T G V+A+K+++ + + + +K L ++ + L
Sbjct: 30 LGEMGSGTCGQVW--KMRFRKT----GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVARGLSF 144
+V+ G + + + E M G+ L ++ PI P R+ K+ + + + L +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPI--PERILGKMTVAIVKALYY 139
Query: 145 L---HGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAA 201
L HG VI+RD+K SN+LLD KL DFG++ G D+ R G Y A
Sbjct: 140 LKEKHG----VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDD-KAKDRSAGCAAYMA 192
Query: 202 PEYVATGHLTP-----KSDVYSFGVVLLELLSGR 230
PE + T ++DV+S G+ L+EL +G+
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 81 LGQLRHENLVKLIGYCSESDNRLLVY--EFMPKGSLENHLFRKGVQPISWPTRVKIAIDV 138
+ +L H VKL Y + D+ L + + G L ++ + G + TR A ++
Sbjct: 86 MSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EI 141
Query: 139 ARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L +LHG +I+RDLK N+LL+ + + +++DFG A+ + VGT
Sbjct: 142 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
Y +PE + SD+++ G ++ +L++G
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 120
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 216
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + +G+ A K +K + + ++ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
+++H N++ L + +L+ E + G L + L K + ++ + + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGV 127
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+LH L + + DLK N+ LLD N K+ DFGLA G+ I GT
Sbjct: 128 YYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLRDSRR 258
+ APE V L ++D++S GV+ LLSG A PFL D+++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPFLGDTKQ 223
Query: 259 V----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
+ ++ +Y + + L DPK R ++ D L
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 62/313 (19%)
Query: 29 LGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL--TEVIYLGQLR 85
+G+G +G V++G W +N VA+K S + K W TE+ LR
Sbjct: 45 VGKGRYGEVWRGSWQGEN------------VAVKIF---SSRDEKSWFRETELYNTVMLR 89
Query: 86 HENLVKLIG---YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARG 141
HEN++ I S +L L+ + GSL ++L + +S ++I + +A G
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASG 146
Query: 142 LSFLH----GLDAN--VIYRDLKASNVLLDSNFNAKLSDFGLA-------RDGPTGDNTH 188
L+ LH G + +RDLK+ N+L+ N ++D GLA G+N
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 189 VSTRIVGTRGYAAPEY------VATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAE 242
VGT+ Y APE V + D+++FG+VL E+ RR + G+ E
Sbjct: 207 -----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVE 256
Query: 243 QTL-----VEWADPFLRDSRRVLRIMDTR---LGGQYSKKEAQXXXXXXLQCLHMDPKNR 294
V DP D R+V+ + R +S +C + +P R
Sbjct: 257 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
Query: 295 PSMVDVLTSLEQL 307
+ + + +L ++
Sbjct: 317 LTALRIKKTLTKI 329
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 53 GSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSE--SDNRLLVYEFMP 110
G+ IVV + +++ S + +++ E L H N++ ++G C + + L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 111 KGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA 170
GSL N L + VK A+D ARG +FLH L+ + L + +V +D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTA 152
Query: 171 KLS--DFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPK--------SDVYSFG 220
++S D + P R Y AP +VA L K +D +SF
Sbjct: 153 RISXADVKFSFQSP-------------GRXY-APAWVAPEALQKKPEDTNRRSADXWSFA 198
Query: 221 VVLLELLS 228
V+L EL++
Sbjct: 199 VLLWELVT 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + T+ +G A K + + E+ + LRH
Sbjct: 59 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV L + + +++YEFM G L + + + +S V+ V +GL +H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH-- 166
Query: 149 DANVIYRDLKASNVLLDSNFNA--KLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
+ N ++ DLK N++ + + KL DFGL + V+T GT +AAPE
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 223
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ +D++S GV+ LLSG
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSG 246
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LVKL ++ N +V E++ G + +HL R G S P A + +LH L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL 160
Query: 149 DANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTR---IVGTRGYAAPEYV 205
D +IYRDLK N+L+D +++DFG A+ V R + GT APE +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEALAPEII 210
Query: 206 ATGHLTPKSDVYSFGVVLLELLSG 229
+ D ++ GV++ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + T+ +G A K + + E+ + LRH
Sbjct: 165 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
LV L + + +++YEFM G L + + + +S V+ V +GL +H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH-- 272
Query: 149 DANVIYRDLKASNVLLDSNFNA--KLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
+ N ++ DLK N++ + + KL DFGL + V+T GT +AAPE
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 329
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ +D++S GV+ LLSG
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 26 DYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
D +G G F V+KG +D T T + + ++L Q KE E L L+
Sbjct: 31 DIEIGRGSFKTVYKG-LDTET---TVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQ 83
Query: 86 HENLVKLIGYCS-ESDNR-----LLVYEFMPKGSLENHLFRKGVQPI----SWPTRVKIA 135
H N+V+ Y S ES + +LV E G+L+ +L R V I SW ++
Sbjct: 84 HPNIVRF--YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI--- 138
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDS-NFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+GL FLH +I+RDLK N+ + + K+ D GLA T + ++
Sbjct: 139 ---LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFAKAVI 191
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLE 225
GT + APE + DVY+FG LE
Sbjct: 192 GTPEFXAPEXYEEKY-DESVDVYAFGXCXLE 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 48/249 (19%)
Query: 27 YLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVIYLGQL 84
+L+G G +G V + + VVAIK++ E K L E+ L +L
Sbjct: 59 HLIGTGSYGHVCEAY---------DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 85 RHENLVKLIGYCSESD----NRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVAR 140
H+++VK++ D + L V + + LFR V + + ++
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLTELHIKT-LLYNLLV 167
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLAR--DGPTGDNTHVS-------- 190
G+ ++H A +++RDLK +N L++ + + K+ DFGLAR D P N+ +
Sbjct: 168 GVKYVHS--AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 191 ---------------TRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELLSGRR--- 231
T V TR Y APE + + T DV+S G + ELL+ +
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 232 ALDEDRGGL 240
A DRG L
Sbjct: 286 AYHADRGPL 294
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 63/307 (20%)
Query: 28 LLGEGGFGCVFKG--WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT---EVIYLG 82
LLG+GGFG VF G D+ A + I R + + + +T EV L
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVA--------IKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 83 QLR----HENLVKLIGYCSESDNRLLVYEF-MPKGSLENHLFRKGVQPI-SWPTRVKIAI 136
++ H +++L+ + + +LV E +P L +++ KG P+ P+R
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQ 147
Query: 137 DVARGLSFLHGLDANVIYRDLKASNVLLD-SNFNAKLSDFG---LARDGPTGDNTHVSTR 192
VA + H V++RD+K N+L+D AKL DFG L D P D
Sbjct: 148 VVA---AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD------- 197
Query: 193 IVGTRGYAAPEYVATG--HLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWAD 250
GTR Y+ PE+++ H P + V+S G++L +++ G
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDI------------------- 237
Query: 251 PFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQLHTS 310
PF RD I++ L + + +CL P +RPS+ ++L +
Sbjct: 238 PFERDQ----EILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291
Query: 311 KDMPRTP 317
+D+P P
Sbjct: 292 EDVPLNP 298
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L +++H N++ L + +L+ E + G L + L K + ++ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+ +LH L + + DLK N+ LLD N K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPF 252
I GT + APE V L ++D++S GV+ LLSG A PF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------------------ASPF 217
Query: 253 LRDSRRV----LRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVL 301
L D+++ + ++ +Y + + L DPK R ++ D L
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 57 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 115
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 116 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 168
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 169 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 226 HKILFPGRDYIDQ 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 46 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 104
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 105 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 157
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + T V TR Y APE + D++S G ++ E
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 214
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 215 HKILFPGRDYIDQ 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 77 EVIYLGQLRHENLVKLIGYCSE--SDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E+ L +L H N+VKL+ + D+ +V+E + +G + + ++P+S
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
D+ +G+ +LH +I+RD+K SN+L+ + + K++DFG++ + D +T V
Sbjct: 143 FQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--V 198
Query: 195 GTRGYAAPEYVATGH--LTPKS-DVYSFGVVLLELLSGRRALDEDR 237
GT + APE ++ + K+ DV++ GV L + G+ ++R
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 204 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
+ APE + T +SDV+SFGV+L E+ S G + V+ + F R
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCR 312
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQLHTSK 311
+ R+ Y+ E L C H +P RP+ +V+ L +L Q + +
Sbjct: 313 RLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
Query: 312 D 312
D
Sbjct: 366 D 366
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G F V + G I K S + H++ E L+H N
Sbjct: 30 LGKGAFSVVRRC-------VKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 82
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSFLHG 147
+V+L SE + L+++ + G L E+ + R+ ++ ++ + LH
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLHC 137
Query: 148 LDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
V++RDLK N+LL S KL+DFGLA + GT GY +PE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYLSPEV 195
Query: 205 VATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
+ D+++ GV+L LL G DED+ L +Q
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 206 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
+ APE + T +SDV+SFGV+L E+ S G + V+ + F R
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCR 314
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPS---MVDVLTSLEQLHTSK 311
+ R+ Y+ E L C H +P RP+ +V+ L +L Q + +
Sbjct: 315 RLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
Query: 312 D 312
D
Sbjct: 368 D 368
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 75 LTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
E+ + L H LV L + ++ +V + + G L HL ++ V ++ I
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFI 121
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
++ L +L + +I+RD+K N+LLD + + ++DF +A P T ++T +
Sbjct: 122 C-ELVMALDYLQ--NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MA 175
Query: 195 GTRGYAAPEYVAT---GHLTPKSDVYSFGVVLLELLSGRR 231
GT+ Y APE ++ + D +S GV ELL GRR
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 199 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
+ APE + T +SDV+SFGV+L E+ S G + V+ + F R
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCR 307
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ R+ Y+ E L C H +P RP+ +++ L L
Sbjct: 308 RLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + G+G A K +K + ++ EV L
Sbjct: 20 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
++RH N++ L + +L+ E + G L + L K + ++ + + G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGV 128
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+LH + + DLK N+ LLD N KL DFG+A G+ I GT
Sbjct: 129 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 183
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 57 VVAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-E 115
++ K+L A + H++ E L+H N+V+L SE LV++ + G L E
Sbjct: 36 IINTKKLSA---RDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKL 172
+ + R+ ++ ++ + LH V++RDLK N+LL S KL
Sbjct: 93 DIVAREYYSEADASHCIQQILE-----AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
+DFGLA + GD GT GY +PE + D+++ GV+L LL G
Sbjct: 148 ADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
Query: 233 L-DEDRGGLAEQ 243
DED+ L +Q
Sbjct: 206 FWDEDQHKLYQQ 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + G+G A K +K + ++ EV L
Sbjct: 13 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
++RH N++ L + +L+ E + G L + L K + ++ + + G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGV 121
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+LH + + DLK N+ LLD N KL DFG+A G+ I GT
Sbjct: 122 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 176
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIV 194
+ VA+G+ FL I+RDL A N+LL K+ DFGLARD +
Sbjct: 197 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 195 GTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEWADPFLR 254
+ APE + T +SDV+SFGV+L E+ S G + V+ + F R
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCR 305
Query: 255 DSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTSLEQL 307
+ R+ Y+ E L C H +P RP+ +++ L L
Sbjct: 306 RLKEGTRMR----APDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L Q+ H N++ L + +L+ E + G L + L +K + +S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+++LH + + DLK N+ LLD N + KL DFGLA + G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
I GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + +G+ A K +K + + ++ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
Q+ H N++ L + +L+ E + G L + L +K + +S + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
++LH + + DLK N+ LLD N + KL DFGLA + G I GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 23/238 (9%)
Query: 15 ISKIATKNFCSDYLL----GEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQG 70
++ I F +Y L G+G F V + + + +++ K+L A +
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRC----VKVLAGQEYAAMIINTKKLSA---RD 53
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWP 129
H++ E L+H N+V+L SE + L+++ + G L E+ + R+
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 113
Query: 130 TRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDN 186
++ ++ + LH V++R+LK N+LL S KL+DFGLA +
Sbjct: 114 HCIQQILE-----AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 187 THVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
GT GY +PE + D+++ GV+L LL G DED+ L +Q
Sbjct: 169 AWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + D+ T G A+K+++ E F+ E++ L
Sbjct: 82 LGRGSFGEVHR-MEDKQT--------GFQCAVKKVRLEVFRAE-----ELMACAGLTSPR 127
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RGLSFLHG 147
+V L G E + E + GSL + +G P R + A GL +LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLH- 183
Query: 148 LDANVIYRDLKASNVLLDSN-FNAKLSDFG----LARDGPTGDNTHVSTRIVGTRGYAAP 202
+++ D+KA NVLL S+ +A L DFG L DG G + I GT + AP
Sbjct: 184 -SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKDLLTGDYIPGTETHMAP 241
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V K DV+S ++L +L+G
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK------EWLTEVIYLG 82
LG G F V K + +G+ A K +K + + E EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
Q+ H N++ L + +L+ E + G L + L +K + +S + G+
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
++LH + + DLK N+ LLD N + KL DFGLA + G I GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + G+G A K +K + ++ EV L
Sbjct: 34 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
++RH N++ L + +L+ E + G L + L K + ++ + + G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGV 142
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
+LH + + DLK N+ LLD N KL DFG+A G+ I GT
Sbjct: 143 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 197
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI 136
EV L Q+ H N++ L + +L+ E + G L + L +K + +S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 137 DVARGLSFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTR 192
+ G+++LH + + DLK N+ LLD N + KL DFGLA + G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 193 IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
I GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHK------EWLTEVIYLG 82
LG G F V K + +G+ A K +K + + E EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
Q+ H N++ L + +L+ E + G L + L +K + +S + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
++LH + + DLK N+ LLD N + KL DFGLA + G I GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYLG 82
LG G F V K + +G+ A K +K + + ++ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGL 142
Q+ H N++ L + +L+ E + G L + L +K + +S + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 143 SFLHGLDANVIYRDLKASNV-LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRG 198
++LH + + DLK N+ LLD N + KL DFGLA + G I GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWL-TEVIYLGQLRHE 87
LG G FG V +++ + SG+ IK + + Q E + E+ L L H
Sbjct: 30 LGSGAFGDV--HLVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 88 NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGV--QPISWPTRVKIAIDVARGLSFL 145
N++K+ + N +V E G L + + +S ++ + L++
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 146 HGLDANVIYRDLKASNVLL-DSNFNA--KLSDFGLARDGPTGDNTHVSTRIVGTRGYAAP 202
H +V+++DLK N+L D++ ++ K+ DFGLA + ++ ST GT Y AP
Sbjct: 141 HS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAP 195
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V +T K D++S GVV+ LL+G
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR-H 86
LLGEG + V QN G A+K ++ ++ EV L Q + +
Sbjct: 20 LLGEGAYAKVQGAVSLQN---------GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
+N+++LI + + LV+E + GS+ H+ ++ + + ++ DVA L FLH
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLH 128
Query: 147 GLDANVIYRDLKASNVLLDSNFN---AKLSDFGLA-----RDGPTGDNTHVSTRIVGTRG 198
+ +RDLK N+L +S K+ DF L + T T T G+
Sbjct: 129 --TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 199 YAAPEYVA--TGHLT---PKSDVYSFGVVLLELLSG 229
Y APE V T T + D++S GVVL +LSG
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + D+ T G A+K+++ E F+ E++ L
Sbjct: 101 LGRGSFGEVHR-MEDKQT--------GFQCAVKKVRLEVFRAE-----ELMACAGLTSPR 146
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RGLSFLHG 147
+V L G E + E + GSL + +G P R + A GL +LH
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLH- 202
Query: 148 LDANVIYRDLKASNVLLDSN-FNAKLSDFG----LARDGPTGDNTHVSTRIVGTRGYAAP 202
+++ D+KA NVLL S+ +A L DFG L DG G + I GT + AP
Sbjct: 203 -SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAP 260
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V K DV+S ++L +L+G
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 43/241 (17%)
Query: 22 NFCSDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKA--ESFQGHKEWLTEVI 79
N+ +L+G G +G V+ + D+N + VAIK++ E K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY-DKN--------ANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 80 YLGQLRHENLVKLIGYCSESD----NRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
L +L+ + +++L D + L + + L+ LF+ + + I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKT-IL 137
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVS----- 190
++ G F+H ++ +I+RDLK +N LL+ + + K+ DFGLAR + + H+
Sbjct: 138 YNLLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 191 ------------------TRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELLSGRR 231
T V TR Y APE + + T D++S G + ELL+ +
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
Query: 232 A 232
+
Sbjct: 256 S 256
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 30/237 (12%)
Query: 19 ATKNFCSDY----LLGEGGFGCVFKGWIDQNT---FAPTKPGSGIVVAIKRLKAESFQGH 71
A+ F +Y LG+G F V + + + T FA ++ K+L A FQ
Sbjct: 23 ASTKFSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAK------IINTKKLSARDFQKL 75
Query: 72 KEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPT 130
+ E +L+H N+V+L E LV++ + G L E+ + R+
Sbjct: 76 ER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 131 RVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA---KLSDFGLARDGPTGDNT 187
++ + +++ H +++R+LK N+LL S KL+DFGLA + +
Sbjct: 133 CIQ---QILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
H GT GY +PE + + D+++ GV+L LL G DED+ L Q
Sbjct: 188 H---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 241
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 26/223 (11%)
Query: 29 LGEGGFGCVFKGWIDQNT---FAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
LG+G F V + + + T FA ++ K+L A FQ + E +L+
Sbjct: 13 LGKGAFS-VVRRCVHKTTGLEFAAK------IINTKKLSARDFQKLER---EARICRKLQ 62
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
H N+V+L E LV++ + G L E+ + R+ ++ + +++
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESIAY 119
Query: 145 LHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAA 201
H +++R+LK N+LL S KL+DFGLA + + H GT GY +
Sbjct: 120 CHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLS 174
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
PE + + D+++ GV+L LL G DED+ L Q
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 26/223 (11%)
Query: 29 LGEGGFGCVFKGWIDQNT---FAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLR 85
LG+G F V + + + T FA ++ K+L A FQ + E +L+
Sbjct: 14 LGKGAFS-VVRRCVHKTTGLEFAAK------IINTKKLSARDFQKLER---EARICRKLQ 63
Query: 86 HENLVKLIGYCSESDNRLLVYEFMPKGSL-ENHLFRKGVQPISWPTRVKIAIDVARGLSF 144
H N+V+L E LV++ + G L E+ + R+ ++ + +++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESIAY 120
Query: 145 LHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAA 201
H +++R+LK N+LL S KL+DFGLA + + H GT GY +
Sbjct: 121 CHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLS 175
Query: 202 PEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
PE + + D+++ GV+L LL G DED+ L Q
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 57 VVAIKRLKAESFQGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL-E 115
++ K+L A FQ + E +L+H N+V+L E LV++ + G L E
Sbjct: 38 IINTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 116 NHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKL 172
+ + R+ ++ + +++ H +++R+LK N+LL S KL
Sbjct: 95 DIVAREFYSEADASHCIQ---QILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 173 SDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRA 232
+DFGLA + + H GT GY +PE + + D+++ GV+L LL G
Sbjct: 150 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 233 L-DEDRGGLAEQ 243
DED+ L Q
Sbjct: 207 FWDEDQHRLYAQ 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + D+ T G A+K+++ E F+ + E++ L
Sbjct: 80 LGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 125
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RGLSFLHG 147
+V L G E + E + GSL + + G P R + A GL +LH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLH- 181
Query: 148 LDANVIYRDLKASNVLLDSNFN-AKLSDFG----LARDGPTGDNTHVSTRIVGTRGYAAP 202
+++ D+KA NVLL S+ + A L DFG L DG G + I GT + AP
Sbjct: 182 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAP 239
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V K D++S ++L +L+G
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 95 YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWP----TRVKIAIDVARGLSFLHGLD 149
Y + D L +V E+MP G L N + V P W V +A+D + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIH--- 196
Query: 150 ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT-- 207
RD+K N+LLD + + KL+DFG T VGT Y +PE + +
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQG 250
Query: 208 --GHLTPKSDVYSFGVVLLELLSG 229
G+ + D +S GV L E+L G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVARG 141
L+H ++V+L+ S +V+EFM L + ++ + V +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNA---KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L + H D N+I+RD+K VLL S N+ KL FG+A G++ V+ VGT
Sbjct: 145 LRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPH 200
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V DV+ GV+L LLSG
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 95 YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWP----TRVKIAIDVARGLSFLHGLD 149
Y + D L +V E+MP G L N + V P W V +A+D + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIH--- 196
Query: 150 ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT-- 207
RD+K N+LLD + + KL+DFG T VGT Y +PE + +
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQG 250
Query: 208 --GHLTPKSDVYSFGVVLLELLSG 229
G+ + D +S GV L E+L G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 95 YCSESDNRL-LVYEFMPKGSLENHLFRKGVQPISWP----TRVKIAIDVARGLSFLHGLD 149
Y + D L +V E+MP G L N + V P W V +A+D + F+H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIH--- 191
Query: 150 ANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVAT-- 207
RD+K N+LLD + + KL+DFG T VGT Y +PE + +
Sbjct: 192 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQG 245
Query: 208 --GHLTPKSDVYSFGVVLLELLSG 229
G+ + D +S GV L E+L G
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 84 LRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVARG 141
L+H ++V+L+ S +V+EFM L + ++ + V +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 142 LSFLHGLDANVIYRDLKASNVLLDSNFNA---KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L + H D N+I+RD+K VLL S N+ KL FG+A G++ V+ VGT
Sbjct: 143 LRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPH 198
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
+ APE V DV+ GV+L LLSG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGL--ARDGPTGDNTHV 189
+ I I +A + FLH +++RDLK SN+ + K+ DFGL A D + T +
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 190 STR--------IVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELL 227
+ VGT+ Y +PE + + + K D++S G++L ELL
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 23 FCSDY----LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEV 78
+ SD+ +LG+G FG V K +N AIK+++ + + L+EV
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIR-HTEEKLSTILSEV 53
Query: 79 IYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGS--------LENHLFRKGVQPISWPT 130
L L H+ +V+ E N + + K S EN + +
Sbjct: 54 XLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ 113
Query: 131 RV----KIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGP---- 182
+ ++ + LS++H +I+R+LK N+ +D + N K+ DFGLA++
Sbjct: 114 QRDEYWRLFRQILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 183 -----------TGDNTHVSTRIVGTRGYAAPEYV-ATGHLTPKSDVYSFGVVLLELL 227
+ DN T +GT Y A E + TGH K D YS G++ E +
Sbjct: 172 ILKLDSQNLPGSSDNL---TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V + D+ T G A+K+++ E F+ + E++ L
Sbjct: 66 VGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 111
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RGLSFLHG 147
+V L G E + E + GSL + + G P R + A GL +LH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLH- 167
Query: 148 LDANVIYRDLKASNVLLDSNFN-AKLSDFG----LARDGPTGDNTHVSTRIVGTRGYAAP 202
+++ D+KA NVLL S+ + A L DFG L DG G + I GT + AP
Sbjct: 168 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAP 225
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V K D++S ++L +L+G
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 71 HKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSL---ENHLFRKGVQPIS 127
+ ++ E+ + +++E + G + D ++YE+M S+ + + F
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 128 W-PTRVKIAI--DVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTG 184
+ P +V I V S++H + N+ +RD+K SN+L+D N KLSDFG +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESE----- 200
Query: 185 DNTHVSTRIVGTRG---YAAPEYVA--TGHLTPKSDVYSFGVVL 223
V +I G+RG + PE+ + + + K D++S G+ L
Sbjct: 201 --YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
+G G FG V + D+ T G A+K+++ E F+ + E++ L
Sbjct: 82 VGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 127
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVA-RGLSFLHG 147
+V L G E + E + GSL + + G P R + A GL +LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLH- 183
Query: 148 LDANVIYRDLKASNVLLDSNFN-AKLSDFG----LARDGPTGDNTHVSTRIVGTRGYAAP 202
+++ D+KA NVLL S+ + A L DFG L DG G + I GT + AP
Sbjct: 184 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAP 241
Query: 203 EYVATGHLTPKSDVYSFGVVLLELLSG 229
E V K D++S ++L +L+G
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 VAIKRLKAESFQGH---KEWLTEVIYLGQLRHENLVKLIGYCS------ESDNRLLVYEF 108
VAIK+L + FQ K E++ + + H+N++ L+ + E + +V E
Sbjct: 52 VAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 109 MPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNF 168
M + + +S+ + + G+ LH A +I+RDLK SN+++ S+
Sbjct: 111 MDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC 163
Query: 169 NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLE--- 225
K+ DFGLAR T + + V TR Y APE + D++S G ++ E
Sbjct: 164 TLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
Query: 226 ---LLSGRRALDE 235
L GR +D+
Sbjct: 221 HKILFPGRDYIDQ 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 69 QGHKEWLTEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISW 128
G +W+T + Y Q NL ++ Y D L+ +F + E F +
Sbjct: 130 NGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF--------Y 180
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFG----LARDGPTG 184
+ IAID L ++H RD+K N+L+D N + +L+DFG L DG
Sbjct: 181 LAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 229
Query: 185 DNTHVSTRIVGTRGYAAPEYVAT-----GHLTPKSDVYSFGVVLLELLSGR 230
T S+ VGT Y +PE + G P+ D +S GV + E+L G
Sbjct: 230 --TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 51/231 (22%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR------------LKAESFQGHKEWL 75
+ G +G V G +D GI VAIKR + ++SF K L
Sbjct: 29 FISSGSYGAVCAG-VD---------SEGIPVAIKRVFNTVSDGRTVNILSDSFLC-KRVL 77
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEF----MPKGSLENHLFRKGVQPISWPTR 131
E+ L H N++ L R + F M K L L R + + R
Sbjct: 78 REIRLLNHFHHPNILGL---------RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 132 VKIA--------IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+ I+ + GL LH +A V++RDL N+LL N + + DF LAR+
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 184 GDNTHVSTRIVGTRGYAAPEYVATGH-LTPKSDVYSFGVVLLELLSGRRAL 233
N T V R Y APE V T D++S G V+ E+ + R+AL
Sbjct: 187 DAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 51/231 (22%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR------------LKAESFQGHKEWL 75
+ G +G V G +D GI VAIKR + ++SF K L
Sbjct: 29 FISSGSYGAVCAG-VD---------SEGIPVAIKRVFNTVSDGRTVNILSDSFLC-KRVL 77
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEF----MPKGSLENHLFRKGVQPISWPTR 131
E+ L H N++ L R + F M K L L R + + R
Sbjct: 78 REIRLLNHFHHPNILGL---------RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 132 VKIA--------IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPT 183
+ I+ + GL LH +A V++RDL N+LL N + + DF LAR+
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 184 GDNTHVSTRIVGTRGYAAPEYVATGH-LTPKSDVYSFGVVLLELLSGRRAL 233
N T V R Y APE V T D++S G V+ E+ + R+AL
Sbjct: 187 DAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L++ E M G L + + +G Q + +I D+ + FLH N+ +RD+K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 140
Query: 163 LLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S KL+DFG A++ T N + T Y APE + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAKE--TTQNALQTP--CYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 197 GVIMYILLCG 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L++ E M G L + + +G Q + +I D+ + FLH N+ +RD+K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 159
Query: 163 LLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S KL+DFG A++ T N + T Y APE + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKE--TTQNALQTP--CYTPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 216 GVIMYILLCG 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF-RKGVQPISWPTRVKI 134
E++Y Q H N+++LI + E D LV+E M GS+ +H+ R+ + V+
Sbjct: 61 VEMLYQCQ-GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ- 118
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARD-GPTGDNTHVS 190
DVA L FLH + + +RDLK N+L + K+ DFGL GD + +S
Sbjct: 119 --DVASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 191 T----RIVGTRGYAAPEYV-----ATGHLTPKSDVYSFGVVLLELLSG 229
T G+ Y APE V + D++S GV+L LLSG
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 250 GVIMYILLCG 259
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 152
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 153 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 210 GVIMYILLCG 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 153
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 154 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 211 GVIMYILLCG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 198
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 256 GVIMYILLCG 265
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 147
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 148 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 205 GVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 154
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 212 GVIMYILLCG 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 28 LLGEGGFGCVFKG-WIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRH 86
L+G+G FG V+ G W + ++ I+R + + K EV+ Q RH
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIR--------LIDIERDNEDQLKAFKR---EVMAYRQTRH 88
Query: 87 ENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLH 146
EN+V +G C S L + + KG + R + +IA ++ +G+ +LH
Sbjct: 89 ENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 147 GLDANVIYRDLKASNVLLDSNFNAKLSDFGL------ARDGPTGDNTHVSTRIVGTRGYA 200
++++DLK+ NV D N ++DFGL + G D + G +
Sbjct: 148 A--KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHL 201
Query: 201 APEYVATGHLTP-----------KSDVYSFGVVLLEL 226
APE + L+P SDV++ G + EL
Sbjct: 202 APEIIR--QLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 57 VVAIKRLKAESFQGHKEWLT----EVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKG 112
+VA+K L +E+ + T E G+L+ ++V + + E D +L V + G
Sbjct: 61 IVALK-LXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDF-GEIDGQLYVDXRLING 118
Query: 113 -SLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAK 171
L L R+G P++ P V I + G + A +RD+K N+L+ ++ A
Sbjct: 119 VDLAAXLRRQG--PLAPPRAVAIVRQI--GSALDAAHAAGATHRDVKPENILVSADDFAY 174
Query: 172 LSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSG 229
L DFG+A T + VGT Y APE + H T ++D+Y+ VL E L+G
Sbjct: 175 LVDFGIA-SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 162
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D++S
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 220 GVVLLELLSG 229
GV++ LL G
Sbjct: 220 GVIMYILLCG 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G F V + PT G I K S + H++ E L+H N
Sbjct: 12 LGKGAFSVVRRC-----MKIPT--GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V+L SE LV++ + G L + + + + I + L+G
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG- 123
Query: 149 DANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
+++RDLK N+LL S KL+DFGLA + GD GT GY +PE +
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
D+++ GV+L LL G DED+ L +Q
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 126
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 127 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 181
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 175
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG+G F V + PT G I K S + H++ E L+H N
Sbjct: 12 LGKGAFSVVRRC-----MKIPT--GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
+V+L SE LV++ + G L + + + + I + L+G
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG- 123
Query: 149 DANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYV 205
+++RDLK N+LL S KL+DFGLA + GD GT GY +PE +
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 206 ATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRGGLAEQ 243
D+++ GV+L LL G DED+ L +Q
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 175
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 175
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 63/304 (20%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAE-SFQGHKEWLTE---------- 77
LG G +G V ++ P SG + A+KR++A + Q K L +
Sbjct: 42 LGRGAYGVV-----EKXRHVP----SGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 78 ---VIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKI 134
V + G L E V + C E + L + KG Q I KI
Sbjct: 93 PFTVTFYGALFREGDVWI---CXELXDTSL-------DKFYKQVIDKG-QTIPEDILGKI 141
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI- 193
A+ + + L LH +VI+RD+K SNVL+++ K DFG++ G D+ V+ I
Sbjct: 142 AVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGIS--GYLVDD--VAKDID 196
Query: 194 VGTRGYAAPEYV-----ATGHLTPKSDVYSFGVVLLELLSGRRALDEDRGGLAEQTLVEW 248
G + Y APE + G+ + KSD++S G+ +EL R D W
Sbjct: 197 AGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD------------SW 243
Query: 249 ADPFLRDSRRVLRIMDTRLGGQYSKKEAQXXXXXXLQCLHMDPKNRPSMVDVLTS-LEQL 307
PF +++ ++++ + K + QCL + K RP+ ++ L
Sbjct: 244 GTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTL 299
Query: 308 HTSK 311
H SK
Sbjct: 300 HESK 303
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 119
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 120 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 174
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYEFM-PKGSLENHLFRKGVQPISWPTRVKIAIDV 138
++ +++L+ + D+ +L+ E M P L + + +G + ++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA----------LQEEL 115
Query: 139 ARGL------SFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVST 191
AR + H + V++RD+K N+L+D N KL DFG G +T V T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYT 171
Query: 192 RIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 245
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 246 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 300
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIA 135
TE+ L +L H ++K+ + ++++ +V E M G L + + G + + T
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 259
Query: 136 IDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARDGPTGDNTHVSTR 192
+ + +LH + +I+RDLK NVLL S K++DFG ++ G+ + + T
Sbjct: 260 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRT- 314
Query: 193 IVGTRGYAAPEY---VATGHLTPKSDVYSFGVVLLELLSGRRALDEDR 237
+ GT Y APE V T D +S GV+L LSG E R
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 32/214 (14%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKR-LKAESFQGHKEWLTEVIYLGQLRH 86
++G G FG VF+ + ++ VAIK+ L+ + F+ + + ++ +H
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKVLQDKRFKNRELQIMRIV-----KH 91
Query: 87 ENLVKLIGYCSESDNRL------LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAI-DVA 139
N+V L + + ++ LV E++P+ ++ +K+ + +
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 140 RGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
R L+++H + + +RD+K N+LLD KL DFG A+ G+ + + +R
Sbjct: 152 RSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRY 206
Query: 199 YAAPEYV--ATGHLTPKSDVYSFGVVLLELLSGR 230
Y APE + AT + T D++S G V+ EL+ G+
Sbjct: 207 YRAPELIFGATNYTT-NIDIWSTGCVMAELMQGQ 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKE------WLTEVIYLG 82
LGEG +G V+K ID T VAIKR++ E H+E + EV L
Sbjct: 42 LGEGTYGEVYKA-IDTVT--------NETVAIKRIRLE----HEEEGVPGTAIREVSLLK 88
Query: 83 QLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRV--KIAIDVAR 140
+L+H N+++L + L++E+ EN L + + RV +
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNA-----KLSDFGLARDGPTGDNTHVSTRIVG 195
G++F H ++RDLK N+LL + + K+ DFGLAR G T +
Sbjct: 144 GVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQFTHEII 199
Query: 196 TRGYAAPE-YVATGHLTPKSDVYSFGVVLLELL 227
T Y PE + + H + D++S + E+L
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI 193
+AID L ++H RD+K NVLLD N + +L+DFG D T S+
Sbjct: 186 LAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCL-KMNDDGTVQSSVA 236
Query: 194 VGTRGYAAPEYV-----ATGHLTPKSDVYSFGVVLLELLSGR 230
VGT Y +PE + G P+ D +S GV + E+L G
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 134 IAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNAKLSDFGLARDGPTGDNTHVSTRI 193
+AID L ++H RD+K NVLLD N + +L+DFG D T S+
Sbjct: 202 LAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVA 252
Query: 194 VGTRGYAAPEYV-----ATGHLTPKSDVYSFGVVLLELLSGR 230
VGT Y +PE + G P+ D +S GV + E+L G
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
L+V E + G L + + +G Q + +I + + +LH + N+ +RD+K N+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 163 LLDS---NFNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
L S N KL+DFG A++ + ++ T T Y APE + D +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 220 GVVLLELLSG 229
GV+ LL G
Sbjct: 250 GVIXYILLCG 259
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 154 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 196
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 254
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 155 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 197
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 255
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 155 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 197
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 255
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 155 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 197
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 255
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 154 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 196
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 254
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 155 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 197
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 255
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 154 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 196
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 254
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 76 TEVIYLGQLRHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLF-RKGVQPISWPTRVKI 134
E++Y Q H N+++LI + E D LV+E M GS+ +H+ R+ + V+
Sbjct: 61 VEMLYQCQ-GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ- 118
Query: 135 AIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFN---AKLSDFGLARD-GPTGDNTHVS 190
DVA L FLH + + +RDLK N+L + K+ DF L GD + +S
Sbjct: 119 --DVASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 191 T----RIVGTRGYAAPEYV-----ATGHLTPKSDVYSFGVVLLELLSG 229
T G+ Y APE V + D++S GV+L LLSG
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 154 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 196
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 169 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 211
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 212 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 122 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 164
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDEDRGGLAEQTL 245
V T GTR Y+ PE++ +S V+S G++L +++ G + D + Q
Sbjct: 165 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF 222
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 122 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 164
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 165 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 127 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 169
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 169 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 211
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 212 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 126 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 168
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 169 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 125 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 167
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 168 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 127 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 169
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 142 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 184
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 142 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 184
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 141 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 183
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 184 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 174 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 216
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 217 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 141 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 183
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 184 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 142 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 184
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 127 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 169
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
++G+G FG V K + D VA+K ++ E + H++ E+ L LR +
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQH--------VALKMVRNEK-RFHRQAAEEIRILEHLRKQ 153
Query: 88 ------NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG-VQPISWPTRVKIAIDVAR 140
N++ ++ + ++ + +E + E L +K Q S P K A + +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNA--KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L LH +I+ DLK N+LL + K+ DFG + ++ V T I +R
Sbjct: 212 CLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXI-QSRF 264
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRG 238
Y APE + D++S G +L ELL+G L ED G
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 161 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 203
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 204 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 149 AVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 191
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 192 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 103 LLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNV 162
+L+ E+ G + + + + +S +++ + G+ +LH N+++ DLK N+
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH--QNNIVHLDLKPQNI 162
Query: 163 LLDSNF---NAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVATGHLTPKSDVYSF 219
LL S + + K+ DFG++R G + I+GT Y APE + +T +D+++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 220 GVVLLELLS 228
G++ LL+
Sbjct: 220 GIIAYMLLT 228
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHE 87
++G+G FG V K + D VA+K ++ E + H++ E+ L LR +
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQH--------VALKMVRNEK-RFHRQAAEEIRILEHLRKQ 153
Query: 88 ------NLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKG-VQPISWPTRVKIAIDVAR 140
N++ ++ + ++ + +E + E L +K Q S P K A + +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 141 GLSFLHGLDANVIYRDLKASNVLLDSNFNA--KLSDFGLARDGPTGDNTHVSTRIVGTRG 198
L LH +I+ DLK N+LL + K+ DFG ++ V T I +R
Sbjct: 212 CLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXI-QSRF 264
Query: 199 YAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAL-DEDRG 238
Y APE + D++S G +L ELL+G L ED G
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 48/230 (20%)
Query: 28 LLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLT------EVIYL 81
LLG GGFG V+ G + + VAIK ++ + E EV+ L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 82 GQLR--HENLVKLIGYCSESDNRLLVYE-----------FMPKGSLENHLFRKGVQPISW 128
++ +++L+ + D+ +L+ E +G+L+ L R +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 129 PTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDSNFNA-KLSDFGLARDGPTGDNT 187
R H + V++RD+K N+L+D N KL DFG G +T
Sbjct: 122 AVR--------------HCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT 164
Query: 188 HVSTRIVGTRGYAAPEYVATGHLTPKS-DVYSFGVVLLELLSGRRALDED 236
V T GTR Y+ PE++ +S V+S G++L +++ G + D
Sbjct: 165 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Query: 29 LGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQLRHEN 88
LG G FG V + + +G V K + E+ + QL H
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 89 LVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGL 148
L+ L + +L+ EF+ G L + + + + +S + GL +H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMH-- 166
Query: 149 DANVIYRDLKASNVLLDSN--FNAKLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEYVA 206
+ ++++ D+K N++ ++ + K+ DFGLA + V+T T +AAPE V
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVD 223
Query: 207 TGHLTPKSDVYSFGVVLLELLSG 229
+ +D+++ GV+ LLSG
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 58/239 (24%)
Query: 25 SDYLLGEGGFGCVFKGWIDQNTFAPTKPGSGIVVAIKRLKAESFQGHKEWLTEVIYLGQL 84
S+ +LG G G V + Q +F G VA+KR+ + L E+ L +
Sbjct: 19 SEKILGYGSSGTV----VFQGSF------QGRPVAVKRMLIDFCDIA---LMEIKLLTES 65
Query: 85 R-HENLVKLIGYCSESDNRLLVYEF------------MPKGSLENHLFRKGVQPISWPTR 131
H N+++ YCSE+ +R L S EN +K PIS
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS---- 119
Query: 132 VKIAIDVARGLSFLHGLDANVIYRDLKASNVLLDS-------------NFNAKLSDFGLA 178
+ +A G++ LH L +I+RDLK N+L+ + N +SDFGL
Sbjct: 120 --LLRQIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 179 RDGPTGDNTHVS--TRIVGTRGYAAPEYVATGH-------LTPKSDVYSFGVVLLELLS 228
+ +G ++ + GT G+ APE + + LT D++S G V +LS
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+ +E + K + E L QP P +A + L FLH + + + DLK N+L
Sbjct: 99 IAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLH--ENQLTHTDLKPENIL 155
Query: 164 L-DSNFNA------------------KLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
+S F +++DFG A T D+ H +T IV TR Y PE
Sbjct: 156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEV 210
Query: 205 VATGHLTPKSDVYSFGVVLLELLSG 229
+ DV+S G +L E G
Sbjct: 211 ILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 104 LVYEFMPKGSLENHLFRKGVQPISWPTRVKIAIDVARGLSFLHGLDANVIYRDLKASNVL 163
+ +E + K + E L QP P +A + L FLH + + + DLK N+L
Sbjct: 108 IAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLH--ENQLTHTDLKPENIL 164
Query: 164 L-DSNFNA------------------KLSDFGLARDGPTGDNTHVSTRIVGTRGYAAPEY 204
+S F +++DFG A T D+ H +T IV TR Y PE
Sbjct: 165 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEV 219
Query: 205 VATGHLTPKSDVYSFGVVLLELLSG 229
+ DV+S G +L E G
Sbjct: 220 ILELGWAQPCDVWSIGCILFEYYRG 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,225,861
Number of Sequences: 62578
Number of extensions: 419577
Number of successful extensions: 3640
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 1226
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)