Your job contains 1 sequence.
>018789
MDSSTNHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGD
NSNNSSFQEFEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSN
LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSS
LGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGE
LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP
NMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018789
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 600 1.9e-58 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 384 1.4e-42 2
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 436 4.6e-41 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 385 1.7e-38 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 350 8.1e-35 2
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 365 1.5e-33 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 325 8.8e-32 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 203 9.0e-15 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 182 7.8e-14 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 197 1.1e-13 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 193 1.3e-13 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 193 3.0e-13 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 197 3.5e-13 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 189 4.8e-13 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 188 7.5e-13 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 185 2.1e-12 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 185 4.9e-12 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 187 5.1e-12 1
UNIPROTKB|Q6K8J6 - symbol:OJ1669_F01.28 "Putative unchara... 165 6.6e-12 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 182 1.4e-11 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 180 2.1e-11 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 175 2.3e-11 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 178 2.6e-11 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 177 3.7e-11 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 175 4.9e-11 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 175 5.5e-11 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 171 1.3e-10 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 171 3.5e-10 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 167 3.9e-10 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 158 4.6e-10 2
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 170 4.8e-10 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 168 6.3e-10 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 162 6.9e-10 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 166 1.2e-09 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 159 1.4e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 159 1.5e-09 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 167 2.1e-09 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 162 2.6e-09 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 156 3.4e-09 2
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 160 3.6e-09 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 158 5.1e-09 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 155 8.0e-09 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 159 8.2e-09 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 152 9.5e-09 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 134 2.1e-08 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 149 3.9e-08 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 144 3.9e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 148 5.4e-08 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 145 5.5e-08 1
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 128 8.5e-08 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 143 8.8e-08 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 143 1.6e-07 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 130 2.0e-07 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 134 5.2e-07 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 140 5.4e-07 2
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 135 5.9e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 140 7.4e-07 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 136 1.4e-06 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 132 1.8e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 137 2.1e-06 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 138 2.2e-06 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 136 3.3e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 137 3.3e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 129 3.7e-06 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 126 5.7e-06 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 132 6.0e-06 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 126 1.1e-05 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 129 1.6e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 126 1.7e-05 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 126 1.8e-05 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 128 1.9e-05 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 125 2.3e-05 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 127 2.7e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 126 3.1e-05 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 124 3.2e-05 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 123 4.3e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 117 4.4e-05 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 120 6.7e-05 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 123 9.6e-05 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 122 9.7e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 119 0.00012 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 121 0.00012 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 113 0.00017 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 122 0.00018 2
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 120 0.00018 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 117 0.00021 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 119 0.00022 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 113 0.00025 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 113 0.00053 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 106 0.00071 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 116 0.00073 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 113 0.00088 1
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 159/365 (43%), Positives = 201/365 (55%)
Query: 1 MDSSTNHNYHQQ-SNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMXXXX 59
MDS+ NH Y + GL RF SAP+++L F D + G + S + S +
Sbjct: 1 MDSN-NHLYDPNPTGSGLLRFRSAPSSVLAAFVDD-DKIGFDSDRLLSRFVTSNGVNGDL 58
Query: 60 XXXXXXXFQEFEV-KSPVSYGNS--------QQSCSGLPPHYPRQSSA-MDHNSYDLFLD 109
+ + VSY + S GLPPHYPRQS M+ D FL
Sbjct: 59 GSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQFLG 118
Query: 110 -QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEXXXXXXXXXXXXDLSPSTKR-L 167
+ K V SNL+RQSSSPAG+F LS QNGY S + + SPS L
Sbjct: 119 INNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEED-----EESPSNSNGL 173
Query: 168 KXXXXXXXXXXXXLGMLSRVSEVESDGPTHGKVRNGNGDTQFYS--TGFSYGSWNDSSHF 225
+ LGMLS++ E+ + T+ + N + F + + +D F
Sbjct: 174 RRHCSLSSRPPSSLGMLSQIPEIAPE--TNFPYSHWNDPSSFIDNLSSLKREAEDDGKLF 231
Query: 226 T-----ESFTDMKREQGNGEL--GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRS 278
ES M+ + L +ST+++M +V+K+LQ QDSVPCKIRAKRGCATHPRS
Sbjct: 232 LGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRS 291
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
IAERVRRTRISERMRKLQELVPNMDKQTNT+DMLDLAVDYIKDLQ Q+K L+DNRA CKC
Sbjct: 292 IAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKC 351
Query: 339 SKIQK 343
+K
Sbjct: 352 MNKEK 356
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 384 (140.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 94/232 (40%), Positives = 125/232 (53%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEXXXX-------XXXXXXXXDLSPSTKRLKXXX 171
+NL R +SSPAGLF+ + + YA+ + L+P +K L
Sbjct: 150 NNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTPRSKLLPPTS 209
Query: 172 XXXXXXXXX---LGMLSRVSEVESDGPTHGKVRN-GNGDTQFYSTGFSYGSWNDSSHFTE 227
G SR+ G + N G+ ++ + + D +
Sbjct: 210 RAMSPISEVDVKPGFSSRLPPRTLSGGFNRSFGNEGSASSKLTALARTQSGGLDQYKTKD 269
Query: 228 SFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTR 287
+ +R + S ++ +E+ L DS+PCKIRAKRGCATHPRSIAERVRRT+
Sbjct: 270 EDSASRRPPLAHHM--SLPKSLSDIEQLLS--DSIPCKIRAKRGCATHPRSIAERVRRTK 325
Query: 288 ISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
ISERMRKLQ+LVPNMD QTNTADMLDLAV YIKDLQ Q K L ++RA+C+CS
Sbjct: 326 ISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377
Score = 83 (34.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 6 NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFM 55
+H + + N GL R+ SAP++ +F +S+E +S E+ER++S F+
Sbjct: 14 DHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFL 63
Score = 40 (19.1 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 118 NSNLVRQSSSPAGLFA 133
NS L+R S+P+ F+
Sbjct: 22 NSGLIRYQSAPSSYFS 37
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 84/95 (88%), Positives = 90/95 (94%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
TS+EMAA+EKFLQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNMDK
Sbjct: 48 TSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDK 107
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
QTNTADMLDLAVDYIKDLQ Q K L+D+RA C CS
Sbjct: 108 QTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCS 142
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 385 (140.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 85/142 (59%), Positives = 101/142 (71%)
Query: 209 FYSTGFSYGSWNDSSHFTESFTDMKR-EQGNGE----LGNSTSA-----EMAAVEKFLQF 258
F S GFS GSW DS+ S + K GN + L N S EMA VEK+LQ
Sbjct: 66 FSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQM 125
Query: 259 Q-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
Q D VP ++RAKRGCATHPRSIAER RRTRISE++RKLQ LVPNMDKQT+T+DMLDLAVD
Sbjct: 126 QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVD 185
Query: 318 YIKDLQNQFKTLSDNRAKCKCS 339
+IK LQ+Q +TL +++ KC CS
Sbjct: 186 HIKGLQSQLQTLKEDKEKCTCS 207
Score = 43 (20.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 71 EVKSPVSYGNSQQSCSGL 88
++K+P+S+ +S+Q GL
Sbjct: 10 KMKAPLSFASSRQGSGGL 27
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 350 (128.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 70/123 (56%), Positives = 91/123 (73%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
T+ + +K EQ +G + M + F+DSVPC++RAKRGCATHPRSIAERVRR
Sbjct: 146 TQFSSQLKEEQMSGGISGMMDMNMDKI-----FEDSVPCRVRAKRGCATHPRSIAERVRR 200
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPV 345
TRIS+R+R+LQELVPNMDKQTNTADML+ AV+Y+K LQ+Q + L++ + +CKC KP
Sbjct: 201 TRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKC----KPK 256
Query: 346 ENQ 348
E Q
Sbjct: 257 EEQ 259
Score = 43 (20.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 13 SNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERL 50
S GLSR SAP + + E G+ + +E L
Sbjct: 22 SRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELL 59
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 123/372 (33%), Positives = 177/372 (47%)
Query: 3 SSTNHNYHQQSNPG---LSRFNSAPTALLVNFTDSLESGGV-NKSSF-----ESERLISR 53
SST+ + + S PG L R+ SAP + L + D + GG N F S+ I
Sbjct: 6 SSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFIGN 65
Query: 54 FMXXXXXXXXXXXFQEFEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSR 113
F + V+ + Q G + SY F + S +
Sbjct: 66 FFTGAADSSS---LRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQQ 122
Query: 114 VKSV-----NSN----LVRQSSSPAGLFAKLSA-QNGYASTKEXXXXXXXXXXXXDLSPS 163
KS NS+ L RQ SSPA F L++ +N ++ + S
Sbjct: 123 HKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHS 182
Query: 164 TKRLKXXXXXXXXXXXXLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYG---SWN 220
RLK L+R++EV ++ P H +G+G + F + F SW+
Sbjct: 183 --RLKSQLSFTNHDS-----LARINEV-NETPVH----DGSGHS-FSAASFGAATTDSWD 229
Query: 221 DSSH---FTESFTDMK-REQGNG---ELGNSTSAEMAAVEKFLQF-QDSVPCKIRAKRGC 272
D S FT + + ++ +G + + M ++ F+Q +DSVPCKIRAKRGC
Sbjct: 230 DGSGSIGFTVTRPSKRSKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGC 289
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ+Q + L +
Sbjct: 290 ATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKD 349
Query: 333 RAKCKCSKIQKP 344
+ C C +KP
Sbjct: 350 QENCTCGCSEKP 361
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 325 (119.5 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 66/111 (59%), Positives = 85/111 (76%)
Query: 229 FTD-MKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTR 287
FT MK EQ +G++ S+ M+ + +DSV ++RAKRGCATHPRSIAERVRRTR
Sbjct: 147 FTSQMKGEQSSGQVPTGVSS-MSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTR 205
Query: 288 ISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
IS+R+RKLQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L++ + +C C
Sbjct: 206 ISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTC 256
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 13 SNPGLSRFNSAPTALL 28
S GLSR SAP L
Sbjct: 25 SRSGLSRIRSAPATWL 40
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 203 (76.5 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 49/99 (49%), Positives = 63/99 (63%)
Query: 236 QGNG-ELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 294
QG+G + + A +A Q K+RA+RG AT P SIAER+RR RI+ERM+
Sbjct: 99 QGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKS 158
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNR 333
LQELVPN +K T+ A MLD +DY+K LQ Q K LS +R
Sbjct: 159 LQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 196
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 47/127 (37%), Positives = 73/127 (57%)
Query: 210 YSTGFSYGSWNDSSHFTESFTDMK-REQGNGE-LGNSTSAEMAAVEKFLQFQDSVPCK-- 265
+S G + +++SHF + R +GN E G+ + + E+ + ++ K
Sbjct: 42 FSNGALVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDV 101
Query: 266 --IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RAKRG AT S+AERVRR +I+ER++ LQ+LVP K A MLD+ +DY++ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 324 NQFKTLS 330
NQ + LS
Sbjct: 162 NQIEFLS 168
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 197 (74.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 44/69 (63%), Positives = 53/69 (76%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
KIRA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKVLSMSR 204
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 191 QVKVLSMSR 199
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 193 (73.0 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/105 (45%), Positives = 65/105 (61%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
T+S MK + E N+ S + + V K L+ D + +RA+RG AT SIAERVRR
Sbjct: 136 TKSIKKMKHKAKKEE--NNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRR 191
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q + LS
Sbjct: 192 EKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 197 (74.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 42/69 (60%), Positives = 53/69 (76%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN +K TN A MLD +DY+K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 372 QVKVLSMSR 380
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 189 (71.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD ++Y++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 157 QVKVLSMSR 165
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 188 (71.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 41/75 (54%), Positives = 56/75 (74%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY
Sbjct: 137 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 195
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 196 VKFLRLQVKVLSMSR 210
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 185 (70.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 41/73 (56%), Positives = 55/73 (75%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 185 (70.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 56/149 (37%), Positives = 77/149 (51%)
Query: 187 VSEVESDGPTHGKVRNGNGDT---QFYSTGFSYGSWNDSSHFTESFTDMKR--EQGNGEL 241
++ V D + G NG+ D Q S GFS E D K+ EQ
Sbjct: 145 INNVSEDSQSSGG--NGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSN 202
Query: 242 GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 301
N T++E + +D +RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP
Sbjct: 203 ANKTNSEKQPSDSL---KDGY-IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 258
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 259 CDKVTGKAVMLDEIINYVQSLQCQIEFLS 287
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 187 (70.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 40/65 (61%), Positives = 50/65 (76%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK--QTNTADMLDLAVDYIKDL 322
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K QT+ A MLD +DY+K L
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 323 QNQFK 327
Q Q K
Sbjct: 309 QLQVK 313
>UNIPROTKB|Q6K8J6 [details] [associations]
symbol:OJ1669_F01.28 "Putative uncharacterized protein
OJ1669_F01.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634
HOGENOM:HOG000242890 EMBL:AP004124 Gramene:Q6K8J6 Uniprot:Q6K8J6
Length = 153
Score = 165 (63.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 213 GFSY-GSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKR 270
GFS G W +S + + + G + ++++ EMA ++++LQ Q D VP K+RAKR
Sbjct: 61 GFSIVGPWEESRDIISTLGGYESQFGG--MASTSALEMAGMDRYLQLQHDQVPFKVRAKR 118
Query: 271 GCATHPRSIAERVR 284
GCATHPRSIAERVR
Sbjct: 119 GCATHPRSIAERVR 132
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 189 EVESDGPTHGKVRNGN---GDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNST 245
+ S G K R N G Q +S+ S N+S H + K E+ + N
Sbjct: 173 DCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESVHSKD-----KGEESSPATTNGG 227
Query: 246 SAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQ 305
++ ++ + Q +RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K
Sbjct: 228 KSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 287
Query: 306 TNTADMLDLAVDYIKDLQNQFKTLS 330
T A MLD ++Y++ LQ Q + LS
Sbjct: 288 TGKAVMLDEIINYVQSLQRQVEFLS 312
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ LVPN +K + A MLD +DY+K LQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 296
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 297 QVKVLSMSR 305
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 175 (66.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 55/151 (36%), Positives = 79/151 (52%)
Query: 187 VSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTS 246
V + E+ G K+ N T+ +TG S S + SH + T+ + +G ++ S
Sbjct: 57 VDKTENSGSE--KLAN---TTKTATTGSS--SCDQLSHGPSAITNTGKTRGRKARNSNNS 109
Query: 247 AEMAAVEKFLQ----FQDSVPCK---IRAKRGCATHPRSIAERVRRTRISERMRKLQELV 299
E K + ++ P +RA+RG AT S+AERVRR +ISERMR LQ LV
Sbjct: 110 KEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLV 169
Query: 300 PNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P DK T A MLD ++Y++ LQ Q + LS
Sbjct: 170 PGCDKVTGKALMLDEIINYVQTLQTQVEFLS 200
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 178 (67.7 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/111 (43%), Positives = 64/111 (57%)
Query: 220 NDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
ND S D +E N E S+ +E A E ++ +RA+RG AT+ S+
Sbjct: 172 NDQSQKKHK-NDQSKETVNKE---SSQSEEAPKENYIH--------MRARRGQATNSHSL 219
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 220 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 175 (66.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 326 FKTLS 330
+ LS
Sbjct: 240 VEFLS 244
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 175 (66.7 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 73/262 (27%), Positives = 106/262 (40%)
Query: 74 SPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNL--VRQSSSPAGL 131
S S GNS P Q+ MD D+ ++ +S + ++ V + SS L
Sbjct: 79 SSYSAGNSGYYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEETSECDVEKYSSGKTL 138
Query: 132 FAKLSAQNGYASTKEXXXXXXXXXXXXDLSPSTKRLKXXXXXXXXXXXXLGMLSRVSEVE 191
+ + + L+ S KR + + E+
Sbjct: 139 MPLETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDKNKRARVNKRAQKNVEMS 198
Query: 192 SDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHF-TESFTDMKREQGNGELGNSTSAEMA 250
D G+ G + G N S+ F TE ++ + G GE +S+S E
Sbjct: 199 GDN-NEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGE--DSSSKEDD 255
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
K L K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + +
Sbjct: 256 P-SKALNLNG----KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDIST 309
Query: 311 MLDLAVDYIKDLQNQFKTLSDN 332
ML+ AV Y+K LQ Q K LS +
Sbjct: 310 MLEEAVHYVKFLQLQIKLLSSD 331
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 171 (65.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/105 (39%), Positives = 65/105 (61%)
Query: 227 ESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVP-CKIRAKRGCATHPRSIAERVRR 285
+S++ KR++ ++ +ST ++VE D +P +RA+RG AT S+AER RR
Sbjct: 150 QSYSSGKRKEREKKVKSSTKKNKSSVES-----DKLPYVHVRARRGQATDNHSLAERARR 204
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+I+ RM+ LQELVP DK TA +LD +++++ LQ Q + LS
Sbjct: 205 EKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLS 249
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 171 (65.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 52/143 (36%), Positives = 76/143 (53%)
Query: 191 ESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKR--EQGNGELGN-STSA 247
E+ T + RNG +++ S+ S S ++ D KR EQ G S S
Sbjct: 230 ETSSNTKKRKRNGQKNSE---AAQSHRS-QQSEEEPDNNGDEKRNDEQSPNSPGKKSNSG 285
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTN 307
+ + +D +RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T
Sbjct: 286 KQQGKQSSDPPKDGY-IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTG 344
Query: 308 TADMLDLAVDYIKDLQNQFKTLS 330
A MLD ++Y++ LQ Q + LS
Sbjct: 345 KAVMLDEIINYVQSLQRQVEFLS 367
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 147 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 158 (60.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
Score = 38 (18.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 97 SAMDHNSYDLFLDQSSRVKSVNSNL-VRQSSSPAGLFAK 134
S +++ D L SS S+N N+ + +SS G +K
Sbjct: 96 STSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSK 134
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 170 (64.9 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 50/139 (35%), Positives = 68/139 (48%)
Query: 192 SDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAA 251
S P+ K NG G S S D + E+G GE S + +
Sbjct: 239 SPSPSFSKTAEKNG-----GKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPE 293
Query: 252 VEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 311
K D + +RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T A M
Sbjct: 294 PPK-----DYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 312 LDLAVDYIKDLQNQFKTLS 330
LD ++Y++ LQ Q + LS
Sbjct: 347 LDEIINYVQSLQRQVEFLS 365
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 319
Query: 326 FKTLS 330
+ LS
Sbjct: 320 VEFLS 324
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 162 (62.1 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 40/96 (41%), Positives = 58/96 (60%)
Query: 231 DMKREQGNGELGNST-SAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
D R + + GNS+ +A+ A QD + +RA+RG AT S+AER RR +IS
Sbjct: 94 DSLRTEAGTDSGNSSKAADKNATPPEPPKQDYI--HVRARRGQATDSHSLAERARREKIS 151
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
ERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 152 ERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQ 187
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 326 FKTLS 330
+ LS
Sbjct: 318 VEFLS 322
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 159 (61.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 326 FKTLS 330
+ LS
Sbjct: 205 VEFLS 209
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 159 (61.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/116 (39%), Positives = 65/116 (56%)
Query: 215 SYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCAT 274
S S ++SS TE+ TD + +G+ N E QD + +RA+RG AT
Sbjct: 95 SKSSGDNSSLRTEAETDSRNASKSGDQ-NPPPPEPPK-------QDYI--HVRARRGQAT 144
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q + LS
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 200
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 217 GSWNDSSHFTESFTDM-KREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATH 275
G + S H E +M +RE G A+ E+++ +RAKRG AT+
Sbjct: 586 GEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVH--------VRAKRGQATN 637
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 638 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLS 692
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 64/230 (27%), Positives = 100/230 (43%)
Query: 107 FLDQSSRVKSVNSNL----VRQSSSPAGLFAKLSAQNG-YASTKEXXXXXXXXXXXXDLS 161
F ++++R+ S N+ R + AGLF G +A +
Sbjct: 54 FAERAARLSSFNNGGGGVGQRYGGAGAGLFGMPPPAPGDFAGGGSREASSVSDPASSAMK 113
Query: 162 PSTKRLKXXXXXXXXXXXXLGMLSRVSEVESDGPTHGK-VRNGNGDTQFYSTGFSYGSWN 220
+ K G + V + + GK + GNG+ + + + +
Sbjct: 114 DAAANAKKRKSTAAAAAAAKGK-GKEPPVGEEKESDGKRCKTGNGEKESSVKPKAEQAGS 172
Query: 221 DSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
DSS E ++QG G+ N+ E +D V +RA+RG AT S+A
Sbjct: 173 DSS--VEDGGGGGQKQGKGK--NAKPVEPP--------KDYV--HVRARRGQATDSHSLA 218
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
ERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q + LS
Sbjct: 219 ERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 268
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 156 (60.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM LQ+LVP ++ T A MLD ++Y++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 326 FKTLS 330
+ LS
Sbjct: 251 VEFLS 255
Score = 42 (19.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 75 PVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAG 130
P +G+ ++ S +SS +D +S S RV + SN ++ S P+G
Sbjct: 74 PGQFGSDREFGSQPTTQESNKSSLLDPDSV------SDRVHTTKSNSRKRKSIPSG 123
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA++G AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 326 FKTLS 330
+ LS
Sbjct: 236 VEFLS 240
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 158 (60.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 41/102 (40%), Positives = 57/102 (55%)
Query: 233 KREQGNGELGNSTSAEMAAVEKFLQFQDSVPCK----IRAKRGCATHPRSIAERVRRTRI 288
KR++ + AE E + Q P K +RA+RG AT S+AER RR +I
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 289 SERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
SERM+ LQ+LVP +K A +LD ++YI+ LQ Q + LS
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 155 (59.6 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 247 AEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 306
+ M+ E + Q +RA+RG AT S+AER RR +IS++M+ LQ++VP +K T
Sbjct: 122 SNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVT 181
Query: 307 NTADMLDLAVDYIKDLQNQFKTLS 330
A MLD ++Y++ LQ Q + LS
Sbjct: 182 GKAGMLDEIINYVQSLQQQVEFLS 205
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 159 (61.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 51/150 (34%), Positives = 73/150 (48%)
Query: 192 SDGPTHGKVRNGNG---DTQFYSTGFSYGSWNDSSHFTESFTDMKREQ-GNGELGNSTSA 247
SDG + +G G D+ ++ S TE E G G+ S S
Sbjct: 193 SDGNARKRKASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNS- 251
Query: 248 EMAAVEKFLQFQDSVPCK-------IRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 300
E +K + S P + +RA+RG AT S+AERVRR +IS+RM+ LQ+LVP
Sbjct: 252 ENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVP 311
Query: 301 NMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K A MLD ++Y++ LQ Q + LS
Sbjct: 312 GCNKVVGKAVMLDEIINYVQSLQRQVEFLS 341
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 152 (58.6 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 46/113 (40%), Positives = 64/113 (56%)
Query: 220 NDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
++S+ ES T+ Q L NS+ E A+V SV K RA +G AT P+S+
Sbjct: 131 SESNTVDESNTNWVDGQS---LSNSSDDEKASVT-------SVKGKTRATKGTATDPQSL 180
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
R RR +I+ER++ LQ LVPN K + + ML+ AV Y+K LQ Q K LS +
Sbjct: 181 YARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSD 232
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 134 (52.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNR 333
+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS +R
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 300
Score = 63 (27.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/58 (41%), Positives = 28/58 (48%)
Query: 227 ESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPC-KIRAKRGCATHPRSIAERV 283
+SF G G G S SA AA + P + RA+RG AT P SIAERV
Sbjct: 173 QSFGGGAAASGGGG-GGSASAAAAAGASSGGGAAAPPRQRQRARRGQATDPHSIAERV 229
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y
Sbjct: 19 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 77
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + LS
Sbjct: 78 LKQLQLQVQMLS 89
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 144 (55.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 47/138 (34%), Positives = 67/138 (48%)
Query: 193 DGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAV 252
DG H RN + ++S+ TE T + Q NS+ E A +
Sbjct: 61 DGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSY-NSSDDEKA-L 118
Query: 253 EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 312
S+ K +A RG A+ P+S+ R RR RI++R++ LQ LVPN K + + ML
Sbjct: 119 GLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTML 177
Query: 313 DLAVDYIKDLQNQFKTLS 330
+ AV Y+K LQ Q K LS
Sbjct: 178 EDAVHYVKFLQLQIKLLS 195
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 148 (57.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 325 QFKTLSDN 332
Q K LS +
Sbjct: 274 QIKLLSSD 281
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 145 (56.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 45/118 (38%), Positives = 64/118 (54%)
Query: 217 GSWNDSSHFTESFTDMKREQGNGELGNSTSAEM----AAVEKFLQFQDSV-PCKIRAKRG 271
G H T + G+G +G + EM AA++ ++V P K R R
Sbjct: 98 GGRGSEYHTTTTTRPASGGGGDGGVGPAAMREMIFHIAALQPVNIDPETVRPPKRRNVR- 156
Query: 272 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+T P+S+A R+RR RISER+R LQ LVP K +TA MLD A+ Y+K L+ Q ++L
Sbjct: 157 ISTDPQSVAARMRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 213
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 128 (50.1 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 22/25 (88%), Positives = 25/25 (100%)
Query: 258 FQDSVPCKIRAKRGCATHPRSIAER 282
F+DSVPC++RAKRGCATHPRSIAER
Sbjct: 9 FEDSVPCRVRAKRGCATHPRSIAER 33
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 143 (55.4 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 51/134 (38%), Positives = 71/134 (52%)
Query: 213 GFSYGSW---NDSS-----HFTESFTDMKREQGNGELGNSTSA--EMA---AVEKFLQFQ 259
GF YGS N SS ++ F D + N G + +A EM AV + +
Sbjct: 55 GFRYGSGLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHID 114
Query: 260 -DSV-PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
++V P K R R + P+S+A R RR RISER+R LQ LVP K +TA MLD A+
Sbjct: 115 PEAVKPPKRRNVR-ISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 172
Query: 318 YIKDLQNQFKTLSD 331
Y+K L+ Q ++L +
Sbjct: 173 YVKFLKKQVQSLEE 186
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 143 (55.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISE+M LQ+++P +K A +LD ++YI+ LQ Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 326 FKTLS 330
+ LS
Sbjct: 213 VEFLS 217
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 130 (50.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H + +ER RR RI+E+++ LQEL+PN K T+ MLD A+DY+K L
Sbjct: 6 PTPTRRSRSAEFH--NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSL 62
Query: 323 QNQFKTL 329
Q Q + L
Sbjct: 63 QLQLQML 69
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 134 (52.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 329 LS 330
L+
Sbjct: 149 LA 150
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 140 (54.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 211 STGFSYGSWNDSSHFTESFT-DMKREQ---GNGELGNSTSAEMAAVEKFLQFQDSVPCKI 266
S+G SYG N + S T D KR+ + E + + + + + S
Sbjct: 191 SSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSG 250
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
+R A +++ER RR RI+ERM+ LQEL+P+ + T+ A +LD A+DY+K LQ Q
Sbjct: 251 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQL 309
Query: 327 KTL 329
+ +
Sbjct: 310 QVM 312
Score = 42 (19.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 89 PPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAG 130
P H S H + L + S R K+V L S +G
Sbjct: 152 PSHCGSNQSTNIHQATTLPVSMSDRSKNVEERLDTSSGGSSG 193
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 135 (52.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 42/106 (39%), Positives = 57/106 (53%)
Query: 231 DMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRA-KRG---CATHPRSIAERVRRT 286
D E+ ELG EM +Q D P ++ KR + P+S+A R RR
Sbjct: 82 DEDEEEPLEELG--AMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRE 139
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
RISER+R LQ LVP K +TA MLD A+ Y+K L+ Q + L++N
Sbjct: 140 RISERIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLNNN 184
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 140 (54.3 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 213 GFSYGSWNDSSHFTESFTDMKREQGNGELGNST------SAE--MAAVEKFLQFQDSVPC 264
GFS G N++ S T + G GN T S E A V++ +
Sbjct: 131 GFSGGGNNNNVQGNSSGTRVS-SSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSS 189
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ +KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ
Sbjct: 190 RSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQL 248
Query: 325 QFKTLS 330
Q + L+
Sbjct: 249 QVQMLT 254
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 328 TLS 330
LS
Sbjct: 158 MLS 160
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P K R R + P+S+A R+RR RISER+R LQ LVP K +TA MLD A+ Y+K L
Sbjct: 139 PPKRRNVR-ISKDPQSVAARLRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFL 196
Query: 323 QNQFKTL 329
++Q ++L
Sbjct: 197 KSQVQSL 203
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/100 (40%), Positives = 55/100 (55%)
Query: 230 TDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
TD KR++ N S S A K Q S R R H +++ER RR RI+
Sbjct: 222 TDRKRKRIN-HTDESVSLSDAIGNKSNQRSGSN----RRSRAAEVH--NLSERRRRDRIN 274
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
ERM+ LQEL+P+ K T+ A +LD A+DY+K LQ Q + +
Sbjct: 275 ERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 313
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 328 TLS 330
+S
Sbjct: 398 IMS 400
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 329 LS 330
+S
Sbjct: 340 MS 341
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 329 LSDNRAKC 336
+S C
Sbjct: 368 MSMGTGLC 375
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 129 (50.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A R RR RISER+R LQ LVP K +TA MLD A+ Y+K L+ Q ++L ++
Sbjct: 129 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSLEEH 184
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
T+ ++ + + + P R ++ P+S+A R+RR R+S+RMR LQ LVP
Sbjct: 93 TTTRQGVIDAAEEEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPG-GA 151
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTL 329
+ +TA ML+ A+ Y+K L+ ++L
Sbjct: 152 RLDTASMLEEAIRYVKFLKGHVQSL 176
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 132 (51.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+T P+++A R RR RISE++R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQVKALENL 334
Query: 333 RAK 335
R K
Sbjct: 335 RPK 337
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 218 SWNDSSHFTESFTDMKREQGNGELGNSTSAE-MAAVEKFLQFQDSVPCKIRAKRGCATHP 276
S + SS T+ T + + G+S + +AA + + + S R + C+
Sbjct: 108 SVSSSSTITDYETSSELVNPSCSSGSSVGEDSIAATDGSVVLKQSD--NSRGHKQCSKDT 165
Query: 277 RSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+S+ + RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ Q K LS +
Sbjct: 166 QSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSSD 220
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 221 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 277
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 278 QMQVQIM 284
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S A +VRR RISER++ LQ+LVPN K + ML+ A++Y+K LQ Q K L+
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 260
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
+ R A H +S ER RR +I++RM+ LQ+LVPN K T+ A MLD ++Y+K LQ Q
Sbjct: 210 KRSRAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 266
Query: 327 KTLS 330
+S
Sbjct: 267 SMMS 270
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 242 GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATH-PRSIAERVRRTRISERMRKLQELVP 300
GN S + + + V K + K + P+S+A + RR RISER++ LQELVP
Sbjct: 170 GNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVP 229
Query: 301 NMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
N K + ML+ A+ Y+K LQ Q K L+
Sbjct: 230 NGTK-VDLVTMLEKAISYVKFLQVQVKVLA 258
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
++ P+++A R+RR R+SER+R LQ LVP K +TA MLD A Y+K L++Q + L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 359
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
++ P+++A R+RR R+S+R+R LQ+LVP +K +TA MLD A Y+K L++Q + L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKLETL 340
Query: 333 RAKCKCSKI 341
SK+
Sbjct: 341 GTTTTTSKL 349
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 265 KIRAKRGCATH-PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
KI+ K + P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ
Sbjct: 199 KIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQ 257
Query: 324 NQFKTLS 330
Q K L+
Sbjct: 258 VQVKVLA 264
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K ++ AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ A+ Y+K LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 325 QFKTLSDN 332
Q K LS +
Sbjct: 279 QIKLLSSD 286
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 117 (46.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RR RI+++M+ LQ+LVPN K T+ A MLD +DY+K LQ Q + +S
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMS 58
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 120 (47.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R + H ++ E+ RR +I+ER R LQ LVP D ++N A LD + Y+K LQ+Q
Sbjct: 79 RHRHAAGAH--NLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQL 136
Query: 327 KTLS 330
+ S
Sbjct: 137 EATS 140
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
++ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 426
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 122 (48.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 185 SRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSW-NDSSHFTE------SFTDMKREQG 237
S + +V + GP + +V D Q + G S + SS F+ S +KR+ G
Sbjct: 132 STLIDVSAKGPKNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKRKYG 191
Query: 238 NGELGNSTSAEMAAVEKFLQFQDSVPCKIR---AKRGCATHPRSIAERVRRTRISERMRK 294
+ E ST + ++ + V + R KR +T + ER RR +++MR
Sbjct: 192 DIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRA 251
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
LQ+L+PN K + A +LD A+ Y++ LQ Q + +S
Sbjct: 252 LQDLLPNCYKD-DKASLLDEAIKYMRTLQLQVQMMS 286
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ---NQ 325
KR A ++AER RR +I+ERM+ LQ+L+P +K T + ML+ ++Y+K L+ NQ
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQINQ 205
Query: 326 F 326
F
Sbjct: 206 F 206
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 46/149 (30%), Positives = 68/149 (45%)
Query: 182 GMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGEL 241
G +SR V GP V TQ S G + TD+ E+ +
Sbjct: 197 GGVSRTFAVPGLGPRGKAVAIETAGTQ--SWGLCKAETEPVQRQPATETDITDERKR-KT 253
Query: 242 GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 301
T+ E E + +DS K R+ R H ++ER RR +I+E M+ LQEL+P
Sbjct: 254 REETNVENQGTE---EARDSTSSK-RS-RAAIMH--KLSERRRRQKINEMMKALQELLPR 306
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
K T+ + MLD ++Y+K LQ+Q + S
Sbjct: 307 CTK-TDRSSMLDDVIEYVKSLQSQIQMFS 334
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 241 LGNSTSAEMAAVEKFLQFQDS-VPCKIRAKRGC-----ATHPRSIAERVRRTRISERMRK 294
+GN +M + + + V K+ + C A +S + RR RI+ER+R
Sbjct: 77 IGNKRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAKNRRQRINERLRI 136
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
LQEL+PN K + + ML+ A+ Y+K L Q K LS +
Sbjct: 137 LQELIPNGTK-VDISTMLEEAIQYVKFLHLQIKLLSSD 173
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P K T+ ML+ ++Y+K LQ Q +
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQM 412
Query: 329 LS 330
+S
Sbjct: 413 MS 414
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGC---ATH 275
TE+F + R +GN G A +E Q S A C ATH
Sbjct: 219 TENFMNFLRLRGNIFSGGRVEAGPVVIES-TQIGSSATPSSSAAESCVIPATH 270
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
KR ++AER RR +I+E+M+ LQ+L+P +K T + LD A++Y+K LQ+Q +
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQ 309
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+ A+R AT +S+ R RR RI+ R+R LQ+LVPN K + + ML+ AV Y+K LQ
Sbjct: 209 KVPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 267
Query: 325 QFK 327
Q K
Sbjct: 268 QIK 270
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK T+ + + V
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKV 254
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+T P+S+A R RR RIS+R R L+ LVP K +T ML+ A+ Y+K L+ Q
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSKM-DTVSMLEQAIHYVKFLKTQ 104
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 277 RSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+S A + RR RISER+R LQELVP+ K + MLD A+ Y+K +Q Q + L
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGK-VDMVTMLDRAISYVKFMQMQLRVL 251
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 106 (42.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 265 KIRAKRGCA-THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
K R G A TH + E+ RR+RI+E+ + LQ LVP DK + ++ LD + Y+K LQ
Sbjct: 146 KARRNPGYAETH--GLTEKRRRSRINEKFKMLQRLVPGCDKCSQSST-LDRTIHYMKSLQ 202
Query: 324 NQFKTL 329
Q + +
Sbjct: 203 QQLQAM 208
Score = 42 (19.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 238 NGELGNSTSAEMAAVE 253
+G+LG +T+A AAV+
Sbjct: 8 SGDLGEATTAAAAAVD 23
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 257 QFQDSVPCKIRAKRGCATHPRSI-AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
Q D K + K G + +++ AER RR ++++R+ L+ LVP + K + A +L A
Sbjct: 294 QIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITK-LDRASILGDA 352
Query: 316 VDYIKDLQNQFKTLSD 331
++Y+K+LQN+ K L D
Sbjct: 353 INYVKELQNEAKELQD 368
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 113 (44.8 bits), Expect = 0.00088, P = 0.00088
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RR +I+ER R LQ LVP DK +N A LD + Y+K LQ+Q K +S
Sbjct: 226 RRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQHQLKAMS 271
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.126 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 315 0.00082 116 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 92
No. of states in DFA: 598 (64 KB)
Total size of DFA: 202 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.21u 0.21s 25.42t Elapsed: 00:00:01
Total cpu time: 25.21u 0.21s 25.42t Elapsed: 00:00:01
Start: Fri May 10 04:29:40 2013 End: Fri May 10 04:29:41 2013