BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018789
(350 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 223/398 (56%), Positives = 260/398 (65%), Gaps = 76/398 (19%)
Query: 1 MDSSTNHNYHQQS-----NPGLSRFNSAPTALLVNFTDSLESGGVNKSS-----FESERL 50
MDS+TN+ +HQQ+ N GL RF SAP++LL NFTDS + GV+K + FESER
Sbjct: 36 MDSNTNY-HHQQNQNQPPNSGLLRFRSAPSSLLANFTDSGD--GVHKGANLCDDFESER- 91
Query: 51 ISRFMNSGGDNSNNSSFQEFEVKSPVSYGNSQQSC-SGLPPHYPRQSS-----AMDHNSY 104
FM GG FQ+ S SC S LPP YPRQSS AMD SY
Sbjct: 92 ---FMPCGG-------FQD-----------SAMSCQSQLPPQYPRQSSSTSSSAMD-GSY 129
Query: 105 DLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPST 164
+ + K S+LVRQSSSPAGLF+ LS QNGYA + VG++ N NG++SPST
Sbjct: 130 GVVNSNNMEAKQ-GSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEISPST 188
Query: 165 KRLKSQISIPSRIPSSLGMLSRVSEVESD-----GPTHGKVRNGNGDTQFYSTGFSYGSW 219
RLK Q+S S +PSSLG+L ++SE+ S+ P K+ N NGD +FYS GF YGSW
Sbjct: 189 SRLKPQVSFSSGLPSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSW 248
Query: 220 NDSSHFTESFTDMKREQGNG---------------ELGN------------STSAEMAAV 252
NDS+HF E+F+ MKR+Q N E G+ TSAEMAA+
Sbjct: 249 NDSAHF-ENFSGMKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAM 307
Query: 253 EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 312
EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML
Sbjct: 308 EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 367
Query: 313 DLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
DLAV+YIKDLQ Q+ TL+DNRA CKC QKPV NQ V
Sbjct: 368 DLAVEYIKDLQKQYNTLTDNRAHCKCLGKQKPVPNQTV 405
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 223/398 (56%), Positives = 260/398 (65%), Gaps = 76/398 (19%)
Query: 1 MDSSTNHNYHQQS-----NPGLSRFNSAPTALLVNFTDSLESGGVNKSS-----FESERL 50
MDS+TN+ +HQQ+ N GL RF SAP++LL NFTDS + GV+K + FESER
Sbjct: 25 MDSNTNY-HHQQNQNQPPNSGLLRFRSAPSSLLANFTDSGD--GVHKGANLCDDFESER- 80
Query: 51 ISRFMNSGGDNSNNSSFQEFEVKSPVSYGNSQQSC-SGLPPHYPRQSS-----AMDHNSY 104
FM GG FQ+ S SC S LPP YPRQSS AMD SY
Sbjct: 81 ---FMPCGG-------FQD-----------SAMSCQSQLPPQYPRQSSSTSSSAMD-GSY 118
Query: 105 DLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPST 164
+ + K S+LVRQSSSPAGLF+ LS QNGYA + VG++ N NG++SPST
Sbjct: 119 GVVNSNNMEAKQ-GSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEISPST 177
Query: 165 KRLKSQISIPSRIPSSLGMLSRVSEVESD-----GPTHGKVRNGNGDTQFYSTGFSYGSW 219
RLK Q+S S +PSSLG+L ++SE+ S+ P K+ N NGD +FYS GF YGSW
Sbjct: 178 SRLKPQVSFSSGLPSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSW 237
Query: 220 NDSSHFTESFTDMKREQGNG---------------ELGN------------STSAEMAAV 252
NDS+HF E+F+ MKR+Q N E G+ TSAEMAA+
Sbjct: 238 NDSAHF-ENFSGMKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAM 296
Query: 253 EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 312
EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML
Sbjct: 297 EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 356
Query: 313 DLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
DLAV+YIKDLQ Q+ TL+DNRA CKC QKPV NQ V
Sbjct: 357 DLAVEYIKDLQKQYNTLTDNRAHCKCLGKQKPVPNQTV 394
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 243/400 (60%), Gaps = 95/400 (23%)
Query: 1 MDSSTNHNYHQQSN----PGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMN 56
MDSS+N N+H Q+N GL RF SAP++ L NF D+
Sbjct: 1 MDSSSNPNFHHQNNQQPSSGLLRFRSAPSSFLANFNDN---------------------- 38
Query: 57 SGGDNSNNS--SFQEFEVKSPV---------SYGNSQQSCSGLPPHYPRQSSAMDH---- 101
G SNNS FQE E KS V +Y NS QS SGLPPHYPR +++
Sbjct: 39 --GVTSNNSVMGFQELEDKSAVRVREVGAVVNYANSTQSYSGLPPHYPRHTNSSAATSSS 96
Query: 102 ---------NSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGG 152
S + K V+SNL RQSSSPAGLF LS Q GYA+ K +G+Y
Sbjct: 97 AMDSSFGLIGSMAMGGHHEQEAKRVDSNLARQSSSPAGLFGNLSVQTGYATMKGMGNYAR 156
Query: 153 VNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYST 212
VNG++G++SP RLKSQ+S PSRIPSSL MLS++SE+ S+ S
Sbjct: 157 VNGTSGEVSP---RLKSQLSFPSRIPSSLSMLSQISEIGSE-----------------SI 196
Query: 213 GFSYGSWNDSSHFTESFTDMKREQG----------NGELGN------------STSAEMA 250
GF YGSWNDS F+E+F MKR+ NGELGN S +M
Sbjct: 197 GFPYGSWNDSP-FSENFNGMKRDPDDNGKPFSAAQNGELGNRVHLLSHHLSLPKASVDMV 255
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
A+EKFL FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD
Sbjct: 256 AMEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 315
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
MLDLAVDYIKDLQ Q+KTLSDNRA CKC QKPV+NQIV
Sbjct: 316 MLDLAVDYIKDLQKQYKTLSDNRANCKCLSKQKPVQNQIV 355
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/375 (54%), Positives = 245/375 (65%), Gaps = 77/375 (20%)
Query: 19 RFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP--- 75
RF SA ++LL NFTD+ G DN + +FQ+FE KS
Sbjct: 15 RFRSARSSLLANFTDN-----------------------GVDNDSVLNFQDFEDKSAARV 51
Query: 76 ----VSYGNSQQSCSGLPPHYPRQSSA-----MDHNSYDLF----LDQSSRVKSVNSNLV 122
V+Y +S GLPPHYPRQSSA MD +SY L + +V+ V+SN
Sbjct: 52 REEAVNYSCLPRSYPGLPPHYPRQSSATSSSAMD-SSYGLIGSISIGHHEQVEKVDSNPA 110
Query: 123 RQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLG 182
RQ+SSPAGLF L+ QNG VG+Y G+NG+N + SP RL+SQ+S SR+PSSLG
Sbjct: 111 RQNSSPAGLFGNLTVQNG------VGNYSGLNGTNREASP---RLQSQLSFSSRVPSSLG 161
Query: 183 MLSRVSEV-----ESDGPTHGKVRNGNGDTQFYST-GFSYGSWNDSSHFTESFTDMKREQ 236
+LS++SE+ E+ P GK+ + + D++FYS+ GF YGSWNDS H +E+F+ MKREQ
Sbjct: 162 LLSQISEIGSESMEAGSPDSGKLSSVSVDSRFYSSHGFPYGSWNDS-HLSENFSSMKREQ 220
Query: 237 ---------GNGELGN------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATH 275
NGELGN T+ EM A+EKFL FQDSVPCKIRAKRGCATH
Sbjct: 221 ENGNLFSNAQNGELGNRAHVLSHHLSLPKTAMEMVAMEKFLHFQDSVPCKIRAKRGCATH 280
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAK 335
PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV YIKDLQ Q+KTLSDNRA
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQYKTLSDNRAN 340
Query: 336 CKCSKIQKPVENQIV 350
CKC QKPV+N+IV
Sbjct: 341 CKCLSKQKPVQNRIV 355
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 205/409 (50%), Positives = 244/409 (59%), Gaps = 90/409 (22%)
Query: 1 MDSSTNHN--YHQQSNP--GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMN 56
MDS +H+ Y QQ+ P GL RF SAP++LL N T SF SE S
Sbjct: 1 MDSHIHHHQSYQQQNQPSSGLLRFRSAPSSLLSNLT----------PSFVSEDFGS---- 46
Query: 57 SGGDNSNNSSFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQ------ 95
SSF+E E GN+ + CS GLPPHYPR
Sbjct: 47 --------SSFRELE-------GNNNKGCSKDLSSMNSHKGVYGGGLPPHYPRHGSSSST 91
Query: 96 -SSAMDHNSYDLF----LDQSSRVKSVNSNLVRQSSSPAGLFAK--LSAQNGYASTKEVG 148
SSAM+ SY + LD + K S+L+RQSSSPAGLF+ +S QNG+A+ K VG
Sbjct: 92 SSSAME-GSYGMVSSMGLDHEAPHKGFGSSLLRQSSSPAGLFSNNNISFQNGFATMKGVG 150
Query: 149 SYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSE-----VESDGPTHGKVRNG 203
+YG VNGSNG+LSP RLK+Q+S R SSLGMLS++SE +E+ P ++G
Sbjct: 151 NYGAVNGSNGELSPCINRLKNQVSFSPRNASSLGMLSQISELGSEDIEATSPD-DDTKHG 209
Query: 204 NGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQG----------NGELGN---------- 243
DTQ Y GF +GSWND+ +E+ + +KR + NGEL N
Sbjct: 210 GNDTQHYGPGFPFGSWNDTPQLSENISGLKRGRSGNEKMFSDVQNGELANQVNMLSHHLS 269
Query: 244 --STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 301
TSAEM +EK LQF DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP+
Sbjct: 270 LPKTSAEMITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPH 329
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
MDKQTNTADMLDLAV+YIKDLQ QFKTLS+ RA CKC + K NQI
Sbjct: 330 MDKQTNTADMLDLAVEYIKDLQKQFKTLSEKRANCKCISMPKADTNQIA 378
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/380 (51%), Positives = 250/380 (65%), Gaps = 55/380 (14%)
Query: 7 HNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNK-SSFESERLISRFMN-SGGDNSNN 64
H QQ N L RF SAP++L +F+ ++S +N ESERL+SRF + + G NSN+
Sbjct: 6 HQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADGCNSND 65
Query: 65 SSFQEFEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKS-------V 117
S +SPV+ GN SGLPPHYPR SSA++ +S SS S +
Sbjct: 66 S-------ESPVA-GNYS---SGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFL 114
Query: 118 NSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDL---SPSTKRLKSQISIP 174
SNLVRQSSSPAG+ ++L+ QNGY GS+ ++G+N + SPS+ RL SQIS
Sbjct: 115 GSNLVRQSSSPAGVLSQLN-QNGYGG----GSFSRLSGNNNGVEVVSPSSNRLNSQISFS 169
Query: 175 SRIPSSLGMLSRVSEVESDGPTHGKVRNGN-GDTQFYS-TGFSYGSWNDSSHFTESFTDM 232
S +PSSLGM ++SE + K+ N N G+TQF++ +GF + SWN+SS F+E+F +
Sbjct: 170 SLVPSSLGMFPQISEQVVG---NEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGI 226
Query: 233 KRE----------QGNGELGNSTS------------AEMAAVEKFLQFQDSVPCKIRAKR 270
KR+ NGE+GN +++A++EK LQ QD+VPC+IRAKR
Sbjct: 227 KRDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKR 286
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
GCATHPRSIAERVRRTRISERMRKLQ+LVPNMDKQTNTADMLDLAVDYIK+LQ QFKTLS
Sbjct: 287 GCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTLS 346
Query: 331 DNRAKCKCSKIQKPVENQIV 350
DNRA C C +QKP+ NQI+
Sbjct: 347 DNRANCVCVNMQKPLSNQIM 366
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 201/300 (67%), Gaps = 54/300 (18%)
Query: 84 SC-SGLPPHYPRQSS-----AMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSA 137
SC S LPP YPRQSS AMD SY + + K S+LVRQSSSPAGLF+ LS
Sbjct: 2 SCQSQLPPQYPRQSSSTSSSAMD-GSYGVVNSNNMEAKQ-GSSLVRQSSSPAGLFSHLSG 59
Query: 138 QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTH 197
QNGYA + VG++ N NG++SPST RLK Q+S S +PSSLG+L ++SE+ SD
Sbjct: 60 QNGYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGLPSSLGLLPQISEIGSD---- 115
Query: 198 GKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNG---------------ELG 242
GF YGSWNDS+HF E+F+ MKR+Q N E G
Sbjct: 116 --------------PGFPYGSWNDSAHF-ENFSGMKRDQDNDGKLYSGSNTSGIRNEEFG 160
Query: 243 N------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
+ TSAEMAA+EKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE
Sbjct: 161 HRSQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 220
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
RMRKLQELVPNMDKQTNTADMLDLAV+YIKDLQ Q+ TL+DNRA CKC QKPV NQ V
Sbjct: 221 RMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLGKQKPVPNQTV 280
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 235/392 (59%), Gaps = 76/392 (19%)
Query: 1 MDSSTNHNYHQQSN------PGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRF 54
MDS++ HN+H N GL RF SAP+++L F D +SG F+S+RL+SRF
Sbjct: 1 MDSNS-HNHHYDPNHISSSGSGLLRFRSAPSSVLAAFVDDEKSG------FDSDRLLSRF 53
Query: 55 M--NSGGDNSNNSSFQEFEVKSPVSYGNSQQSCS----------------GLPPHYPRQS 96
N G D+ + + EFE KSPVS N+ S + GLPPHYPRQS
Sbjct: 54 ASSNGGNDDLDLPNPSEFEDKSPVSLTNTSVSYAATLPPPPRQTEPSSFLGLPPHYPRQS 113
Query: 97 SAMDHN-SYDLFLDQSSR-VKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVN 154
M + D FL ++ K SNL+RQSSSPAG+F LS QNGY S + + +YGG
Sbjct: 114 KGMMNTIGLDQFLGMNNHHTKPAESNLLRQSSSPAGMFTNLSDQNGYGSMRSLMNYGG-E 172
Query: 155 GSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGF 214
+ D ++ L+ S+ SR SSLGMLS++ E+ +T F
Sbjct: 173 EEDEDRPSNSNGLRRHCSLSSRPLSSLGMLSQIPEI--------------------ATNF 212
Query: 215 SYGSWNDSSHFTESFTDMKRE----------QGNGELGNST-----------SAEMAAVE 253
Y WND S F ++ + +KRE NGE GN S++MA+V+
Sbjct: 213 QYNHWNDPSSFIDNLSSLKRETEDDAKLFNGAQNGESGNRMQLLSHHLSLPKSSDMASVD 272
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
KF+Q QDSVPCK+RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT+DMLD
Sbjct: 273 KFMQLQDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLD 332
Query: 314 LAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPV 345
LAVDYIKDLQ Q+K L+DNRA CKC K +KPV
Sbjct: 333 LAVDYIKDLQRQYKILNDNRANCKC-KEKKPV 363
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 230/393 (58%), Gaps = 89/393 (22%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL RF SAP++LL N T F SE S SSF+E +
Sbjct: 23 GLLRFRSAPSSLLSNLT-----------PFVSEDFGS------------SSFRELQ---- 55
Query: 76 VSYGNSQQSCS---------------GLPPHYPRQSSAMD---------HNSYDLF---- 107
GN+ + CS GLPPHYPR + S+ L
Sbjct: 56 ---GNNNKGCSKDLSSMNSHKGVYGGGLPPHYPRHRGSSSSAATSSSAMEGSFGLVGSMG 112
Query: 108 LDQSSRVKSVNSNLVRQSSSPAGLFAK--LSAQNGYASTKEVGSYGGVNGSNGDLSPSTK 165
++ + + S+L+R S+SPAGLF+ ++ QNG+A+ K VG+YGGVNGSNG+LSP
Sbjct: 113 MNHETPQNGLGSSLLRHSTSPAGLFSNNNINFQNGFATMKGVGNYGGVNGSNGELSPCIN 172
Query: 166 RLKSQISIPSRIPSSLGMLSRVSEV-----ESDGPTHGKVRNGNGDTQFYSTGFSYGSWN 220
LK+Q+S R SSLGMLS++SE+ E+ P GN DTQ Y GF YGSWN
Sbjct: 173 GLKNQVSFSPRNASSLGMLSQISEIGNEDIEATSPDDDTRHEGN-DTQQYGPGFPYGSWN 231
Query: 221 DSSHFTESFTDMKR-----------EQGNGELGN------------STSAEMAAVEKFLQ 257
D+ +E+ + +KR E NGELGN TSAEM ++K LQ
Sbjct: 232 DTPQLSENLSGLKRGRSSNEKMFSDEIQNGELGNQVNMLSHHLSLPKTSAEMITMKKLLQ 291
Query: 258 FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
F DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV+
Sbjct: 292 FPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVE 351
Query: 318 YIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
YIKDLQ QFKTLS+ RAKC+C+ +QK NQI
Sbjct: 352 YIKDLQKQFKTLSEKRAKCECTSMQKADTNQIA 384
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 189/389 (48%), Positives = 230/389 (59%), Gaps = 79/389 (20%)
Query: 1 MDSSTNHNYHQQSNP---GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNS 57
MDS+ NH Y NP GL RF SAP+++L F D +K F+S+RL+SRF+ S
Sbjct: 1 MDSN-NHLY--DPNPTGSGLLRFRSAPSSVLAAFVDD------DKIGFDSDRLLSRFVTS 51
Query: 58 GGDNSNNSSFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQSSA-MDH 101
G N + S +FE KSPVS N+ S + GLPPHYPRQS M+
Sbjct: 52 NGVNGDLGS-PKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNS 110
Query: 102 NSYDLFLD-QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDL 160
D FL + K V SNL+RQSSSPAG+F LS QNGY S + + +Y +
Sbjct: 111 VGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNY-----EEDEE 165
Query: 161 SPSTKR-LKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSW 219
SPS L+ S+ SR PSSLGMLS++ E+ + T F Y W
Sbjct: 166 SPSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPE------------------TNFPYSHW 207
Query: 220 NDSSHFTESFTDMKREQ----------GNGELGN---------------STSAEMAAVEK 254
ND S F ++ + +KRE NGE GN ST+++M +V+K
Sbjct: 208 NDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDK 267
Query: 255 FLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDL 314
+LQ QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT+DMLDL
Sbjct: 268 YLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDL 327
Query: 315 AVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
AVDYIKDLQ Q+K L+DNRA CKC +K
Sbjct: 328 AVDYIKDLQRQYKILNDNRANCKCMNKEK 356
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 230/387 (59%), Gaps = 75/387 (19%)
Query: 1 MDSSTNHNYH-QQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGG 59
MDS+ NH Y + GL RF SAP+++L F D +K F+S+RL+SRF++S G
Sbjct: 1 MDSN-NHLYDPNHTGSGLLRFRSAPSSVLAAFVDD------DKIGFDSDRLLSRFVSSNG 53
Query: 60 DNSNNSSFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQSSAMDHN-S 103
N + S +FE KSPVS N+ S + GLPPHYPRQS M ++
Sbjct: 54 VNDDLGS-PKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGMMNSVG 112
Query: 104 YDLFLD-QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSP 162
D FL + K V SNL+RQSSSPAG+F LS NGY S + + +Y + SP
Sbjct: 113 LDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDHNGYGSMRNMMNY-----EEDEESP 167
Query: 163 STKR-LKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWND 221
S L+ S+ SR PSSLGMLS++ E+ + T F Y WND
Sbjct: 168 SNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPE------------------TNFQYSHWND 209
Query: 222 SSHFTESFTDMKRE----------QGNGELGN---------------STSAEMAAVEKFL 256
S F ++ + +KRE NGE GN ST+++M +V+K+L
Sbjct: 210 PSSFIDNLSSLKRETEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYL 269
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
Q QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT+DMLDLAV
Sbjct: 270 QLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAV 329
Query: 317 DYIKDLQNQFKTLSDNRAKCKCSKIQK 343
DYIKDLQ Q+K L+DNRA CKC +K
Sbjct: 330 DYIKDLQRQYKILNDNRANCKCMNKEK 356
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 190/394 (48%), Positives = 244/394 (61%), Gaps = 51/394 (12%)
Query: 1 MDSSTNHNY---HQQSNPGLSRFNSAPTALLVNFTDSLE-SGGVNKSSFESERLISRFMN 56
MDS++ ++ HQQ N GL RF SAPTA NF E + N +++E RF+N
Sbjct: 1 MDSNSRYHVQQQHQQPNSGLLRFRSAPTA---NFKQQGEVAANTNGNAWEGSEPFLRFLN 57
Query: 57 SGG--DNSNNSSFQEF---------------EVKSPVSYGNSQQSCSG-LPPHYPRQSSA 98
SG D +++ + +EF SP+S NSQQ S + P +SA
Sbjct: 58 SGDTHDTTSSPTLREFVDNKVSNNSKPAKESSASSPLSRMNSQQGYSASMLPSRSTVTSA 117
Query: 99 MDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAK-LSAQNGYASTKEVGSYGGVNGSN 157
M S + +DQS+ KS +SN +RQSS PAG F+ +S QNGY + K VG+Y GVNG++
Sbjct: 118 MMLGS--MGIDQSA--KSFDSNSLRQSSFPAGHFSNNISFQNGYDAMKGVGNYSGVNGND 173
Query: 158 GDLSPSTKRLKSQISIPSRIPSS-LGMLSRVSEVESDG-----PTHGKVRNGNGDTQFYS 211
G+LS S R+K+ IS S PSS LGMLS S++ ++G P G+ + NGD ++Y
Sbjct: 174 GELSLSMNRMKNHISFSSISPSSSLGMLSPTSKMGTEGIRVTRPEDGRQGSCNGDARYYG 233
Query: 212 TGFSYGSWNDSSHFTE---SFTDMKREQGNGELGNS------------TSAEMAAVEKFL 256
GF Y SWN+ SH S ++ + NGE GN TS+EM A++ L
Sbjct: 234 PGFPYASWNEPSHPKRQRSSNDELLFDSQNGEPGNQVQRLSHHLSLPRTSSEMFAMDNLL 293
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
QF DSVPCKIRAKRG ATHPRSIAERVRRTRISER+RKLQELVP MDKQT+TA+MLDLA+
Sbjct: 294 QFSDSVPCKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLAL 353
Query: 317 DYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
DYIKDLQ QFKTLSD RAKCKC +QK +++
Sbjct: 354 DYIKDLQKQFKTLSDKRAKCKCINMQKSEADRVA 387
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/405 (46%), Positives = 229/405 (56%), Gaps = 90/405 (22%)
Query: 1 MDSSTNHNYHQQSNP---GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNS 57
MDS+ NH Y NP GL RF SAP+++L F D +K F+S+RL+SRF+ S
Sbjct: 1 MDSN-NHLY--DPNPTGSGLLRFRSAPSSVLAAFVDD------DKIGFDSDRLLSRFVTS 51
Query: 58 GGDNSNNSSFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQSSA-MDH 101
G N + S +FE KSPVS N+ S + GLPPHYPRQS M+
Sbjct: 52 NGVNGDLGS-PKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNS 110
Query: 102 NSYDLFLD-QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYAS------------TKEVG 148
D FL + K V SNL+RQSSSPAG+F LS QN T +
Sbjct: 111 VGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNELKHFGLNKSNKCLLYTYKFA 170
Query: 149 SYGGV----NGSNGDLSPSTKR-LKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNG 203
YG + N + SPS L+ S+ SR PSSLGMLS++ E+ +
Sbjct: 171 GYGSMRNLMNYEEDEESPSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPE---------- 220
Query: 204 NGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQ----------GNGELGN---------- 243
T F Y WND S F ++ + +KRE NGE GN
Sbjct: 221 --------TNFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLS 272
Query: 244 -----STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 298
ST+++M +V+K+LQ QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL
Sbjct: 273 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 332
Query: 299 VPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
VPNMDKQTNT+DMLDLAVDYIKDLQ Q+K L+DNRA CKC +K
Sbjct: 333 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKEK 377
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 192/296 (64%), Gaps = 41/296 (13%)
Query: 90 PHYPRQSSAMDHNSYD----LFLDQSSRVK---SVNSNLVRQSSSPAGLFAKLSAQNGYA 142
PH+ + NSY + +DQS ++K NSNL+R SSSPAGLF+ L+ +NGYA
Sbjct: 2 PHHNSAAPGTVENSYSAVSSMGMDQSQQIKIGGGNNSNLIRHSSSPAGLFSHLNVENGYA 61
Query: 143 STKEVGSYGGVNGSNGDLS-PSTKRLKSQISIPSRIPSSLGMLSRVSEVE-----SDGPT 196
+ +G++G +G+NG+ S S RLK QI+ S PSS G+++ +SE+ + P
Sbjct: 62 IMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGSPD 121
Query: 197 HGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKR---------------EQGNGEL 241
+G G+ ++ + TGF GSW+DS+ +ESF+ +K E GE
Sbjct: 122 NGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKGEP 181
Query: 242 GN-------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRI 288
N TSA++ +EK+LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRI
Sbjct: 182 ANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRI 241
Query: 289 SERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKP 344
SERMRKLQELVPNMDKQTNT+DMLDLAVDYIKDLQ Q KTLSDNRAKC CS QKP
Sbjct: 242 SERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNRAKCTCSNKQKP 297
>gi|356572064|ref|XP_003554190.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 383
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/390 (47%), Positives = 242/390 (62%), Gaps = 47/390 (12%)
Query: 1 MDSSTNHNYHQQS--NPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSG 58
MDS++ + QQ N GL RF SAP A N E+ N S++E + RF+NSG
Sbjct: 1 MDSNSRYQVQQQHQHNSGLLRFRSAPPA---NLKQQGEAANNNGSAWEGSEPLLRFLNSG 57
Query: 59 G--DNSNNSSFQEF-------------EVKSPVSYGNSQQSCS-GLPPHYPRQSSAMDHN 102
D +++ + +EF E SP+S NSQQ S + P +SAM
Sbjct: 58 DTHDTTSSPTLREFVDNKVSNNSKPAKESSSPLSRMNSQQGYSTSMLPSRSTVTSAMMLG 117
Query: 103 SYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAK-LSAQNGYASTKEVGSYGGVNGSNGDLS 161
S + ++ KS +SNL+RQSS PAG F+ +S QNGY + K VG+Y GVNG++G+LS
Sbjct: 118 S----MGKNQSAKSFDSNLLRQSSFPAGHFSNNISFQNGYDTMKGVGNYSGVNGNDGELS 173
Query: 162 PSTKRLKSQISIPSRIPSS-LGMLSRVSEVESDG-----PTHGKVRNGNGDTQFYSTGFS 215
S R+K+QIS S PSS LG+LS S++ ++G G+ NGD +++ GFS
Sbjct: 174 LSMNRMKNQISFSSISPSSSLGVLSPTSKIGTEGIRVTSTEDGRQGGSNGDARYFGPGFS 233
Query: 216 YGSWNDSSHFTE---SFTDMKREQGNGELGNS------------TSAEMAAVEKFLQFQD 260
Y SWN+ SH S ++ + +GELGN TS++M A++ LQF D
Sbjct: 234 YASWNEPSHHKRQRSSNDELLSDSQDGELGNQVQTLSHHLSLPRTSSDMFAMDSLLQFSD 293
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
SVPCKIRAKRG ATHPRSIAERVRR+RISER+RKLQELVPNMDKQT+TA+MLDLAVDYIK
Sbjct: 294 SVPCKIRAKRGFATHPRSIAERVRRSRISERIRKLQELVPNMDKQTSTAEMLDLAVDYIK 353
Query: 321 DLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
DLQ +FKTL+D RAKCKC +QK +Q+
Sbjct: 354 DLQKEFKTLNDKRAKCKCINMQKSEADQVA 383
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 216/387 (55%), Gaps = 61/387 (15%)
Query: 6 NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNS 65
NH +H N GL R+ SAP++LL +F D S + SS E+E + +R M+ D+
Sbjct: 32 NHQHHPHQNSGLMRYQSAPSSLLGSFVDG-SSVHLQSSSHETETMFARLMSGSSDSQGLQ 90
Query: 66 SFQEFEVKSPV---------SYGNSQQSCSGLPPHY---------PR---QSSAMDHNSY 104
+ + V Y N Q P PR +SS M
Sbjct: 91 GVGAMKHEEEVMVEGVPQQNGYSNGSQMIYNSQPMQTISVHNSASPRTNMESSFMT---- 146
Query: 105 DLFLDQSSRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPS 163
+ + S ++++ N S+LVRQSSSP GLF L+++NG+ T+E+G+ N +N + +PS
Sbjct: 147 SMAAENSMKIRNENCSSLVRQSSSPPGLFPNLTSENGFTPTREMGNLRAGNSTNVEANPS 206
Query: 164 TKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGN-GDTQFYSTGFSYGSWNDS 222
RL +QIS S + S G+L ++SE+ ++ ++GN +++ Y + F+ SW+DS
Sbjct: 207 VSRLNNQISFSSGLSSCNGLLPKISEIRNENIGLHSPKDGNNSNSRCYISNFTTDSWSDS 266
Query: 223 SHFTESFTDMKREQGNGELG-----NSTSAE-----------------------MAAVEK 254
F+ + R + +L NS A+ + +EK
Sbjct: 267 P-----FSGLTRMAADNDLKMFSGLNSLEAQNVDSRYRSLGLTHHLSLPKNFPQITTIEK 321
Query: 255 FLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDL 314
FL FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL PNMDKQTNTADMLDL
Sbjct: 322 FLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDL 381
Query: 315 AVDYIKDLQNQFKTLSDNRAKCKCSKI 341
AV+YIKDLQ Q KTL+D + KC CS I
Sbjct: 382 AVEYIKDLQKQVKTLNDTKVKCTCSSI 408
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 232/427 (54%), Gaps = 96/427 (22%)
Query: 14 NPGLSRFNSAPTALLVNFTD-------------SLESGGV---NKSSFESERLISRFMNS 57
N L R+ SAP++ NF D S E+ + SS E+ER+ SRFM S
Sbjct: 16 NSSLMRYRSAPSSYFSNFIDGEDCEEFLQHRPSSPETERIFSSRPSSPETERIFSRFMAS 75
Query: 58 GG--DNSNNSSF---QEFEVKSPVS-----------------------------YGNSQQ 83
GG D+S+++ Q + +P S Y + Q
Sbjct: 76 GGTEDSSSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQQQNGYASGSQ 135
Query: 84 ---SCSGLPPHYPRQSSAMDHNSYD----LFLDQSSRVK---SVNSNLVRQSSSPAGLFA 133
S PH+ + NSY + +DQS + K NSNL+R SSSPAGLF+
Sbjct: 136 MMYQTSSPMPHHNSAAPGTVENSYSAVSSMGMDQSQQXKIGGGNNSNLIRHSSSPAGLFS 195
Query: 134 KLSAQNGYASTKEVGSYGGVNGSNGDLS-PSTKRLKSQISIPSRIPSSLGMLSRVSEVE- 191
L+ +NGYA + +G++G +G+NG+ S S RLK QI+ S PSS G+++ +SE+
Sbjct: 196 HLNVENGYAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGN 255
Query: 192 ----SDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKR------------- 234
+ P +G G+ ++ + TGF GSW+DS+ +ESF+ +K
Sbjct: 256 KSMGTGSPDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLN 315
Query: 235 --EQGNGELGN-------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
E GE N TSA++ +EK+LQFQDSVPCKIRAKRGCATHPRSI
Sbjct: 316 ASEAQKGEPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSI 375
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
AERVRRTRISERMRKLQELVPNMDKQTNT+DMLDLAVDYIKDLQ Q K + +A KC
Sbjct: 376 AERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKR-NRKKAAIKC- 433
Query: 340 KIQKPVE 346
KI P++
Sbjct: 434 KILDPID 440
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/405 (40%), Positives = 208/405 (51%), Gaps = 94/405 (23%)
Query: 16 GLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVK 73
GL+R+ SAP++ N D E SS E+ER+ SRF+NS +S +
Sbjct: 15 GLTRYRSAPSSYFSNIIDREFYEHVFNRPSSPETERVFSRFVNSLNSEEEDSLHHKLSTD 74
Query: 74 SPVSYG--------------------------------------------NSQQSCSGLP 89
S S N QS S P
Sbjct: 75 SSSSAAVKEEVNQQDQGINEEHVAVAALQQSNNNINNYNNNNNNNYSASHNFYQSSSSKP 134
Query: 90 P---HYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKE 146
P P SAM+ S+ + L S NSNL R SSSPAGLF++++ +N YA +
Sbjct: 135 PLPNQNPNLPSAMEQGSFSMGLRHSGN----NSNLTRHSSSPAGLFSQINIENVYAGVRG 190
Query: 147 VGSYGGVNGSNGDLS-PSTKRLKSQISIPSRIPSSLGMLSRVSEVESDG-----PTHGKV 200
+GS G VN S D S++RLK+Q + SS G +S ++E+ G P
Sbjct: 191 MGSLGAVNNSIEDAKFSSSRRLKNQPNY-----SSSGRMSSIAEIGDKGYRESSPDSEAF 245
Query: 201 RNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKR--------------EQGNGELGNS-- 244
+GN + GF G W+D++ +++ +KR + E G +
Sbjct: 246 ADGND----FMAGFQVGHWDDTAMMSDNVGGLKRFSEEDSKPFSGLNAVETQNETGQTHA 301
Query: 245 ----------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 294
TSAEMAA+EKFLQF DSVPCKIRAKRGCATHPRSIAERVRRT+ISERMRK
Sbjct: 302 PLAHQLSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRK 361
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
LQ+LVPNMDKQTNTADMLDLAVDYIKDLQ Q +TLSD AKC CS
Sbjct: 362 LQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDCHAKCTCS 406
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 230/418 (55%), Gaps = 101/418 (24%)
Query: 8 NYHQ-QSNPGLSRFNSAPTALLVNFTD-SLESGGVNK-SSFESERLISRFM-NSGGDNSN 63
N+HQ Q N GL R+ SAP++ +F D +N+ +S E+ER+ +RF+ NSGG +++
Sbjct: 18 NHHQKQMNSGLQRYQSAPSSYFSSFQDKDFVDDFLNRPTSPETERIFARFLANSGGSSTD 77
Query: 64 NSSFQEF----EVKSPVSYGNSQ------------------------------------- 82
N S Q + +SPV +Q
Sbjct: 78 NISNQNLGAVIKQESPVKEAVTQVSQQAHIMASMNDSDQTRLHRHQQQQQSNYSSGFYQS 137
Query: 83 QSCSGLPPHYPRQSSAMDHNSY-DLFLDQSSRVKSV---NSNLVRQSSSPAGLFAKLS-- 136
QS LP H S+MD+ + +++ S++K NSNLVR SSSPAGLF+ ++
Sbjct: 138 QSKPPLPDH--GSGSSMDYRIMTSMAMERLSQMKPSAGNNSNLVRHSSSPAGLFSNINIE 195
Query: 137 AQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEV------ 190
+NGYA + +G +G +G ++ S R S G +S ++E+
Sbjct: 196 VENGYAVIRGMGDFGTGSG------------ETSYSTAGRPLPSSGRMSPIAEIGNKNRG 243
Query: 191 --ESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFT---ESFTDMKR--------EQG 237
D G+ R+ N Y TGF GSW+D++ + + TD R E
Sbjct: 244 KNNPDSAGFGETRSNN-----YVTGFPIGSWDDTAVMSAGLKRLTDDDRTLSGLNASENE 298
Query: 238 NGELGN------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
+GE+GN TSAE++A+EK+LQ QDSVPCKIRAKRGCATHPRSIAERVRR
Sbjct: 299 SGEVGNHPPMLAHHLSLPKTSAELSAIEKYLQLQDSVPCKIRAKRGCATHPRSIAERVRR 358
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
TRISERMRKLQ+LVPNMDKQTNT+DMLDLAVDYIKDLQ Q +TLS+NR+KC C+ Q+
Sbjct: 359 TRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVETLSENRSKCTCASKQQ 416
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 223/426 (52%), Gaps = 106/426 (24%)
Query: 7 HNYHQQ-----SNPGLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFM-NSG 58
HN HQQ N GL+R+ SAP++ + D E +S E+ER+ +RF+ NSG
Sbjct: 15 HNQHQQIHQKQMNSGLTRYQSAPSSYFSSNLDRDFCEEFLNRPTSPETERIFARFLANSG 74
Query: 59 GDNSN--NSSFQEFEVKSPV-------------------------------------SYG 79
G+ N S+ E + SPV +Y
Sbjct: 75 GNTENIPGSNLCEIKQDSPVKESVSQINQQPQMMASMNNHSSDTRLHQHQHQQHQHGNYS 134
Query: 80 NSQ-----QSCSGLPPHYPRQSSAMDHNSYD-LFLDQSSRVKSV---NSNLVRQSSSPAG 130
SQ +S LP H P S M+H S + L++ +K N NLVR SSSPAG
Sbjct: 135 ASQGFYQSRSKPPLPDHNP--GSGMNHRSTNSTGLERMPSMKPSSGNNPNLVRHSSSPAG 192
Query: 131 LFAKLSAQ--NGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVS 188
LF+ ++ + NGYA ++VG G N + S R PSS G+ S ++
Sbjct: 193 LFSNINIEFENGYAVLRDVGDLGAGN------------RDTTYSAAGRPPSSSGIRSTIA 240
Query: 189 EVES-----DGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTES----FTDMKRE---- 235
E+ + + P G G G+T + + GSW+DS+ + TD R
Sbjct: 241 EMGNKNMGENSPDSG----GFGETPGNNYDYPIGSWDDSAVMSTGSKRYLTDDDRTLSGL 296
Query: 236 -----QGNGELGN------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRS 278
Q N E GN TSAEM+ +E FLQFQDSVPCKIRAKRGCATHPRS
Sbjct: 297 NSSETQQNEEAGNRPPMLAHHLSLPKTSAEMSTIENFLQFQDSVPCKIRAKRGCATHPRS 356
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
IAERVRRTRISERMRKLQ+LVPNMDKQTNT+DMLDLAVDYIKDLQ QFK LS+NRA+C C
Sbjct: 357 IAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKALSENRARCTC 416
Query: 339 SKIQKP 344
K Q+P
Sbjct: 417 LKKQQP 422
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 174/276 (63%), Gaps = 45/276 (16%)
Query: 96 SSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNG 155
SS M+ S+ + L S NSNL+R SSSPAGLF++++ +N YA + +G+ G VN
Sbjct: 141 SSGMEQGSFSMGLRHSGN----NSNLIRHSSSPAGLFSQINIENVYAGVRGMGTLGAVNN 196
Query: 156 SNGDLS-PSTKRLKSQISIPSRIPSSLGMLSRVSEVESDG-----PTHGKVRNGNGDTQF 209
S D S++RLK+Q + SS G +S ++E+ G P + +GN
Sbjct: 197 SIEDAKFSSSRRLKNQPNY-----SSSGRMSSIAEIGDKGNRESSPDNEAFADGND---- 247
Query: 210 YSTGFSYGSWNDSSHFTESFTDMKREQGN--------------GELGNS----------- 244
+ TGF G W+D++ +++ +KR + N E G +
Sbjct: 248 FITGFQVGHWDDAAIMSDNVGGLKRFRENDSKPFSGLNAAETQNETGQTHAPLAHQLSLP 307
Query: 245 -TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 303
TSAE+AA+EKFLQF DSVPCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+LVPNMD
Sbjct: 308 NTSAEIAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMD 367
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
KQTNTADMLDLAVDYIKDLQ Q +TLSD AKC CS
Sbjct: 368 KQTNTADMLDLAVDYIKDLQKQVQTLSDCHAKCTCS 403
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 227/421 (53%), Gaps = 100/421 (23%)
Query: 8 NYHQQSNP-----GLSRFNSAPTALLVNFTD-SLESGGVNK-SSFESERLISRFMNSGGD 60
+ HQQ P GL+RF SAP++ N D NK SS E+ER+ SRF+NS G
Sbjct: 4 DLHQQQQPQVNSSGLTRFKSAPSSYFNNIIDREFYEHVFNKPSSPETERVFSRFINSFGS 63
Query: 61 NSN--------NSSFQEFE-----------------------VKSPVSYGNSQQSCSG-- 87
+ + +S+ +E E V +Y NS S G
Sbjct: 64 DDDLLAQKISVDSTVKEEEEVNINQQQQQQDQGLASINNEHVVHQQSNYNNSVPSSHGFY 123
Query: 88 ----LPPHYPRQ--SSAMDHNSYDLFLDQSSRVKSV---NSNLVRQSSSPAGLFAKLSAQ 138
+PP P Q SS +D S+ + +++ +VK+ NSNL+R SSSPAGLF++++ +
Sbjct: 124 QSSMMPP-LPNQNVSSGLD-GSFSMGVNRLQQVKNHGGNNSNLIRHSSSPAGLFSQINIE 181
Query: 139 NGYASTKEVGSYGGVNGSNGDLSPSTKR-LKSQISIPSRIPSSLGMLSRVSEVESDGPTH 197
NGY S + +G+ G VN S + ST R LK+Q + S G++S + EV
Sbjct: 182 NGYVSMRGMGTLGAVNNSMKEAKFSTARSLKNQSNYSS------GLMSTIDEV------- 228
Query: 198 GKVRNGNGDTQFYSTGFSYG---------SWNDSSHFTESFTDMKR-------------- 234
G N + + + G S+G +W+DS +E+ +KR
Sbjct: 229 GDKDNRENNLENEAFGESHGNEYMDYPVDTWDDSEMMSENVGGLKRFRDNDSKQQFSGLN 288
Query: 235 ---EQGNGELGN---------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAER 282
E G G + +TS+EMAA+EKFL F DSVP KIRAKRGCATHPRSIAER
Sbjct: 289 VQNETGGGHSNSPLAHQLSMPNTSSEMAAMEKFLHFSDSVPMKIRAKRGCATHPRSIAER 348
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQ 342
VRRT+ISERMRKLQ+LVPNMDKQTNTADMLDLAVDYIKDLQ Q + L D +AKC C Q
Sbjct: 349 VRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQDCQAKCTCPHKQ 408
Query: 343 K 343
+
Sbjct: 409 Q 409
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 215/399 (53%), Gaps = 70/399 (17%)
Query: 6 NHNYHQQSNPGLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFMNSGGDNSN 63
+H++ QQ N GL+R+ SAP++ + D E SS E+ER+++RF++S G
Sbjct: 15 HHHHQQQMNSGLTRYRSAPSSYFSSIIDREFYEHVFNRPSSPETERMLTRFVDSLGGGDA 74
Query: 64 NSSFQEFEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDL----------------- 106
+ E + + + + + H P+ ++M++ L
Sbjct: 75 ADADAEDSLANTQNPPTTVVAVKEEVNHQPQDVTSMNNEPLVLQQQQQQQSNNMNNYGSS 134
Query: 107 ----FLDQSSRVKSVN---------SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGV 153
F + R N S+L+R SSPAGLF+ ++ GYA+ + +G+ G
Sbjct: 135 GTQNFYQSTGRPPLPNQMKTGRGSSSSLIRHGSSPAGLFSNINIDTGYAAVRGMGTMGAA 194
Query: 154 NGSN----GDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRN-GNGDTQ 208
+N + SP+T R+K+ + S + SS + S +++ G + GN +
Sbjct: 195 AANNTTEEANFSPAT-RMKNATNFSSGLMSSRPGIGNKSNTQNNAENEGFAESQGN---E 250
Query: 209 FYSTGFSYGSWNDSSHFTESFTDMKR-------------------EQGNGELGNS----- 244
F GF G W+DS+ +++ T +KR E G + +S
Sbjct: 251 FIPAGFPVGPWDDSAIMSDNMTGLKRFRDEDVKPFSGLNAPESQNETGGQQPSSSALAHQ 310
Query: 245 -----TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELV 299
TSAEMAA+EKFLQ DSVPCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+LV
Sbjct: 311 LSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLV 370
Query: 300 PNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
PNMDKQTNTADMLDLAV+YIKDLQNQ + LSDNRAKC C
Sbjct: 371 PNMDKQTNTADMLDLAVEYIKDLQNQVEALSDNRAKCTC 409
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 223/398 (56%), Gaps = 72/398 (18%)
Query: 7 HNYHQQS-----NPGLSRFNSAPTALL---VNFTDSLESGGVNKSSF--------ESERL 50
++YHQQ N GL R+ SAP+++L VN T + GG+ + E + +
Sbjct: 28 YHYHQQQQQIQQNSGLMRYRSAPSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTM 87
Query: 51 ISRFMNS--GGDNSNNSSFQEFEVKSPVSY--GNSQQSCSGLPPH-YPRQSSAMDHNSYD 105
++RFM+S G +S++ + QEF + + G+S+ LP H +S NS D
Sbjct: 88 LARFMSSCNGSGDSSSQNLQEFGERPAIKQEGGDSEMVYQSLPGHNLVTDNSVSVGNSMD 147
Query: 106 LFLD-----------QSSRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGV 153
+ Q++++ + N SNL RQ+SSPAGLF+ L NG+ +E GS+
Sbjct: 148 SAFNVMSSMALENSMQATKMSTANGSNLARQNSSPAGLFSDLGVDNGFVVMREGGSFRAG 207
Query: 154 NGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTG 213
NG+NG+ SP T +L+ ++ S ML +++E+ + G+ G+ Y +
Sbjct: 208 NGTNGEASP-TNKLRRHVNFSS----GQRMLPQIAEIGEE-CIGGRSPEGDVSEARYMSR 261
Query: 214 FSYGSWNDSSHFTESFTDMKREQGN---------------GELGN------------STS 246
F+ SW+ +S + +KR++ N G GN T
Sbjct: 262 FTSDSWDGAS-----LSGLKRQRDNDGNMFSGLNTLDNQDGNSGNRVTGLTHHLSLPKTL 316
Query: 247 AEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQ 305
+E A +EKFL FQ +SVPCKIRAKRG ATHPRSIAERVRRTRISERMRKLQEL PNMDKQ
Sbjct: 317 SETATIEKFLDFQGNSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQ 376
Query: 306 TNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
TNTADMLDLAV++IKDLQ Q KTL+D +AKC CS QK
Sbjct: 377 TNTADMLDLAVEHIKDLQKQVKTLTDTKAKCTCSSKQK 414
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 216/404 (53%), Gaps = 84/404 (20%)
Query: 6 NHNYHQQS----NPGLSRFNSAPTALLVNFTDSLESGGVNK---------SSFESERLIS 52
NH++ Q N GL R+ SAP + L + + SGG N+ SS E E ++S
Sbjct: 42 NHHHCNQDPLHHNSGLMRYRSAPGSFLDSLINGTTSGGGNECQDYRSFRSSSPEMETILS 101
Query: 53 RFMNS--GGDNSNNSSFQEF----EVKSPVSYGNSQQSCSGLPPHYPRQSSAMDH----- 101
RFM++ G +SN+ + QE+ E+K + P QSSA+++
Sbjct: 102 RFMSTCNGSGDSNSQNLQEYGERPEMKQEME-----------DPQMVYQSSAVNNLANNG 150
Query: 102 NSYDLF--LDQSSRV---------------KSVN-SNLVRQSSSPAGLFAKLSAQN-GYA 142
NS D+ +D S V +VN SNLVRQ SSPAG F+ L N G+
Sbjct: 151 NSVDISNSVDSSFNVMNPMAMENSLPARKFSAVNGSNLVRQHSSPAGFFSNLGVDNNGFT 210
Query: 143 STKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRN 202
TKEVG + NG NG+ +PST RL + ++ S +L +++E + P
Sbjct: 211 ITKEVGGFQVSNGLNGESNPSTSRLGNHLNFSS----GQRLLPQIAETGDENPGASSPEG 266
Query: 203 GNGDTQFYSTG-----------FSYGSWNDSSHFTESFTDMKREQGNGELGN-------- 243
G Q+ + F ND S ++ S ++ + GN GN
Sbjct: 267 SIGKRQYMNFANDSWDDSSSNDFKRLRDNDGSVYS-SLNILENQSGNS--GNRITSLTHH 323
Query: 244 ----STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELV 299
T+ EMA VEKFLQFQ SVPCKIRAKRG ATHPRSIAERVRRTRISERMRKLQ+L
Sbjct: 324 LSLPKTAGEMATVEKFLQFQGSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQDLF 383
Query: 300 PNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
PNMDKQTNTADMLDLAV+YIKDLQ Q KTL D +AKC C QK
Sbjct: 384 PNMDKQTNTADMLDLAVEYIKDLQKQVKTLKDTKAKCTCPSKQK 427
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 212/402 (52%), Gaps = 73/402 (18%)
Query: 8 NYHQQSNPGLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFMNS--GGDNSN 63
++ QQ N GL+R+ SAP++ + D E SS E+ER+++RF+NS GGD
Sbjct: 15 HHQQQMNSGLTRYRSAPSSYFSSIIDHEFYEHVFNRPSSPETERMLTRFVNSLGGGDADA 74
Query: 64 NSSFQEFEVKSPVSYGNSQQSCSGLPPHYPRQSS---------------AMDHNSYDL-- 106
S ++P + ++ + PP ++ +N Y+
Sbjct: 75 EDSLA--TTQNPPTVVAVKEEVNQQPPDVTSMNNEPLVLQQQQQQQQQQQQSNNMYNYGS 132
Query: 107 -----FLDQSSRVKSVN---------SNLVRQSSSPAGLFAKLSAQ-NGYAS-TKEVGSY 150
F + R N SNL+R SSPAGLF+ ++ GYA+ + +G+
Sbjct: 133 SGTQNFYQSTGRPPLPNQMKTGHGSSSNLIRHGSSPAGLFSNINIDITGYAAVVRGMGTM 192
Query: 151 GGV---NGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDT 207
G + SP+T+ + + S + SS + S +++ + G+
Sbjct: 193 GAAANNTSEEANFSPATRMKNNAPNFSSGLMSSRAEVGNKSNTQNNNAENEGFAESQGN- 251
Query: 208 QFYSTGFSYGSWNDSSHFTESFTDMKR--------------------EQGNGELGNS--- 244
+F GF G WNDS+ +++ T +KR E G + +S
Sbjct: 252 EFIPAGFPVGPWNDSAIMSDNVTGLKRFRDEDVKPFSGGLNAPESQNETGGQQPSSSALA 311
Query: 245 -------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQE 297
TSAEMAA+EKFLQ DSVPCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+
Sbjct: 312 HQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQD 371
Query: 298 LVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
LVPNMDKQTNTADMLDLAV+YIKDLQNQ +TLSDNRAKC CS
Sbjct: 372 LVPNMDKQTNTADMLDLAVEYIKDLQNQVQTLSDNRAKCTCS 413
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 220/422 (52%), Gaps = 99/422 (23%)
Query: 12 QSNPGLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFMNSGG---------- 59
Q N GL+R+ SAP++ + TD + SS E+ER+ +RFM GG
Sbjct: 22 QINSGLTRYRSAPSSYFRSLTDREFCDQFFNRPSSPETERIFARFMTGGGGGGGGGGPEG 81
Query: 60 -----DNSNNSS-----FQEFEVKSPVSY-GNS----QQSCSGLPPHYPRQSS------- 97
D S S+ E SY GN Q S + +YP SS
Sbjct: 82 SSQNLDESRKSAQGGEVLVSTEANQQTSYVGNETRAIHQQPSNVNSNYPPVSSTPSFYQS 141
Query: 98 ------------AMDHNSYDLFLDQSSRVKS---VNSNLVRQSSSPAGLFAKLSAQN-GY 141
+ S + +D R+++ SNL+RQSSSPAGLF + + GY
Sbjct: 142 SMKPPLPNQGMISQTDGSGSIGIDLKPRIRTDGGRTSNLIRQSSSPAGLFDHIKINDSGY 201
Query: 142 ASTKEVGSYGGVNGSNGDLS-PSTKRLK--SQISIPSRIPSSLGMLSRVSEVESDGPTHG 198
A+ + +G++G + N + S S RLK SQ ++P P+S G++S V +E
Sbjct: 202 AALRGMGNFGTRSSFNEEASFSSPSRLKNFSQRTLP---PNSSGLMSPVVGIEKKS---- 254
Query: 199 KVRNGNGDTQFY---------STGFSYGSWNDSSHFTESFTDMKREQGNGE--------- 240
+R N DT+ + +T F GSW DS+ +++ K + N +
Sbjct: 255 -IRETNQDTKSFAESQTSDYGTTSFPVGSWEDSAVMSDNIVSQKPLEDNDDDEKSYSNFN 313
Query: 241 --------LGN------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
GN +TSAEM A+EK LQF DSVPCK+RAKRGCATHPRSIA
Sbjct: 314 ISDTQKMDTGNRPPLLAHHLSLPNTSAEMNAIEKILQFSDSVPCKLRAKRGCATHPRSIA 373
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSK 340
ERVRRT+ISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK LQ Q +TLSDNRAKCKCS
Sbjct: 374 ERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAKCKCSH 433
Query: 341 IQ 342
Q
Sbjct: 434 SQ 435
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 219/422 (51%), Gaps = 99/422 (23%)
Query: 12 QSNPGLSRFNSAPTALLVNFTDS--LESGGVNKSSFESERLISRFMNSGG---------- 59
Q N GL+R+ SAP++ + TD + SS E+ER+ +RFM GG
Sbjct: 22 QINSGLTRYRSAPSSYFRSLTDREFCDQFFNRPSSPETERIFARFMTGGGGGGGGGGPEG 81
Query: 60 -----DNSNNSS-----FQEFEVKSPVSY-GNS----QQSCSGLPPHYPRQSS------- 97
D S S+ E SY GN Q S + +YP SS
Sbjct: 82 SSQNLDESRKSAQGGEVLVSTEANQQTSYVGNETRAIHQQPSNVNSNYPPVSSTPSFYQS 141
Query: 98 ------------AMDHNSYDLFLDQSSRVKS---VNSNLVRQSSSPAGLFAKLSAQN-GY 141
+ S + +D R+++ SNL+RQSSSPAGLF + + GY
Sbjct: 142 SMKPPLPNQGMISQTDGSGSIGIDLKPRIRTDGGRTSNLIRQSSSPAGLFDHIKINDSGY 201
Query: 142 ASTKEVGSYGGVNGSNGDLS-PSTKRLK--SQISIPSRIPSSLGMLSRVSEVESDGPTHG 198
A+ + +G++G + N + S S RLK SQ ++P P+S G++S V G
Sbjct: 202 AALRGMGNFGTRSSFNEEASFSSPSRLKNFSQRTLP---PNSSGLMSPVV-----GIXEK 253
Query: 199 KVRNGNGDTQFY---------STGFSYGSWNDSSHFTESFTDMKREQGNGE--------- 240
+R N DT+ + +T F GSW DS+ +++ K + N +
Sbjct: 254 SIRETNQDTKSFAESQTSDYGTTSFPVGSWEDSAVMSDNIVSQKPLEDNDDDEKSYSNFN 313
Query: 241 --------LGN------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
GN +TSAEM A+EK LQF DSVPCK+RAKRGCATHPRSIA
Sbjct: 314 ISDTQKMDTGNRPPLLAHHLSLPNTSAEMNAIEKILQFSDSVPCKLRAKRGCATHPRSIA 373
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSK 340
ERVRRT+ISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK LQ Q +TLSDNRAKCKCS
Sbjct: 374 ERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAKCKCSH 433
Query: 341 IQ 342
Q
Sbjct: 434 SQ 435
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 167/265 (63%), Gaps = 41/265 (15%)
Query: 113 RVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSN--GDLSPSTKRLKSQ 170
++K+ SNL+R SSPAGLF+ ++ G+A+ + +G+ G N ++ + S S RLK+
Sbjct: 175 QMKTGRSNLIRHGSSPAGLFSNINIDTGFAAMRGIGTMGAANSTSKEANFSSSVVRLKNA 234
Query: 171 ISIPSRIPSSLGMLS-RVSEVESDGPTHGKVRNGNGDTQFYSTGFSYG-SWNDSSHFTES 228
+ S + + +G S + +E +G + GN + GF G +W D++ +++
Sbjct: 235 PNYASALGAEIGSNSIPQNNLEPEGFAETR---GND----FIPGFPLGTTWEDTAMISDN 287
Query: 229 FTDMKR-----------------EQGNGELGNSTS-------------AEMAAVEKFLQF 258
T +KR E N G +TS AE+AA+EKFLQF
Sbjct: 288 ITGLKRYRDDDDVKPFPPGLNPAETKNETGGQTTSAPLAHQMSMPNTTAELAAIEKFLQF 347
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
DSVPCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+LVPNMDKQTNT+DMLDLAV+Y
Sbjct: 348 SDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEY 407
Query: 319 IKDLQNQFKTLSDNRAKCKCSKIQK 343
IKDLQNQ +TLSDNRAKC CS Q+
Sbjct: 408 IKDLQNQVETLSDNRAKCTCSHKQQ 432
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/235 (53%), Positives = 154/235 (65%), Gaps = 20/235 (8%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVG-SYGGVNGSNGDLSPST----KRLKSQISIPS 175
L+RQSSSPAG L+ NGY S G G NGS S+ RLK Q+S S
Sbjct: 143 LIRQSSSPAGFLNHLNMDNGYESMLRAGMGMGFRNGSTPAAVDSSGSGGSRLKGQLSFSS 202
Query: 176 RIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-WNDSSHFTESFTDMKR 234
R S ++S++SE+ S+ G G + Y G+ S W +SS +E+ + MKR
Sbjct: 203 RQGS---LMSQISEMGSED-LGGSSPEAAGGGRGYMPGYPMSSGWEESSLMSENMSGMKR 258
Query: 235 EQGNGELGNS----------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVR 284
+ + E + TS+EMAA+EKFLQFQD+VPCKIRAKRGCATHPRSIAERVR
Sbjct: 259 PRDSSEPAQNGLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVR 318
Query: 285 RTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
RTRISER+RKLQELVPNMDKQTNTADMLDLAVDYIK+LQ Q K ++++RA C CS
Sbjct: 319 RTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRANCTCS 373
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 154/234 (65%), Gaps = 23/234 (9%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
SNL+RQSSSPAG L+ NGY + G + L+ S RLK Q+S SR
Sbjct: 133 SNLIRQSSSPAGFLDHLNMDNGYGAMLRAG-----MATADSLAGSGSRLKGQLSFSSRQG 187
Query: 179 SSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS---WNDSSHF-TESFTDMKR 234
S ++S++SE++S+ G G + Y G+ GS W DSS +++ + +KR
Sbjct: 188 S---LMSQISEMDSE-EVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSGLKR 243
Query: 235 EQGNGELGNS----------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVR 284
+ + E G S TS+EMA+++KFLQFQD+VPCKIRAKRGCATHPRSIAERVR
Sbjct: 244 PRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVR 303
Query: 285 RTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RT+ISER+RKLQELVPNMDKQTNT+DMLDLAVDYIK+LQ Q K L + +A C C
Sbjct: 304 RTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTC 357
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 153/233 (65%), Gaps = 20/233 (8%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
SNL+RQSSSPAG L+ +NGY + G + L+ RLK Q+S SR
Sbjct: 141 SNLIRQSSSPAGFLDHLNMENGYGAMLRAGM-----ATADSLAGGGSRLKGQLSFSSRQG 195
Query: 179 SSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-WNDSSHF-TESFTDMKREQ 236
S ++S++SE++S+ G + Y G+ GS W DSS +++ + +KR +
Sbjct: 196 S---LMSQISEMDSEEVGGSSPEASGGGGRGYIPGYPMGSGWEDSSALLSDNLSGVKRPR 252
Query: 237 GNGELGNS----------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 286
+ E G S TS+EMA +EKFLQFQD+VPCKIRAKRGCATHPRSIAERVRRT
Sbjct: 253 DSSEPGQSGLTHQFSVPKTSSEMATIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRT 312
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
+ISER+RKLQELVPNMDKQTNT+DMLDLAVDYIKDLQ Q K L +++ C CS
Sbjct: 313 KISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKVLKESQDNCTCS 365
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 202/382 (52%), Gaps = 61/382 (15%)
Query: 10 HQQSNPGLSRFNSAPTALLVNFT-----DSLESGGVNKSSFE---SERLISRFMNSGGDN 61
Q +PGL R+ SAP+ LL D +GG + ++ +++RF+ G +
Sbjct: 26 QQMGSPGLLRYRSAPSTLLGEVMCGGDQDFPAAGGAGHGPPDHAAADNVLARFL--AGHH 83
Query: 62 SNN--------SSFQEFEVKSPV-SYGNSQQSCSGLPPHYPRQSSAMD---HNSYDLFLD 109
S ++ F ++ V S SQQ +Q +AM+ N +
Sbjct: 84 SETRDCKPPRPAAAAHFMDEAAVASMAASQQQQLMYQSQQEQQMAAMEGLYRNVSSGGTE 143
Query: 110 QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGV--NGSNGDLSPSTKRL 167
+ V + N++L+RQSSSPAG L+ NGY S VG GG NG S RL
Sbjct: 144 HGAAVGAGNNSLIRQSSSPAGFLNHLNMDNGYGSMLRVGMGGGGFRNGV------SDARL 197
Query: 168 KSQISIPSRIPSSLGMLSRVSEVESDG------------PTHGKVRNGNGDTQFYSTGFS 215
K Q+S SR S + +S V E DG G R +G + G +
Sbjct: 198 KGQLSFSSRQGSVMSQISEVGSEELDGGGGSGSPEAAGSNASGAARGYSGIPGYPMGGLA 257
Query: 216 YGSWNDSSHFTESFTDMKREQGNGEL------------------GNSTSAEMAAVEKFLQ 257
G+W D + + + + KR + +G G + SAEMAA+EKFLQ
Sbjct: 258 SGAWPDEASPSPT-SGAKRPRDSGPALQQPLAPQLSLPSGKNKGGRAASAEMAAIEKFLQ 316
Query: 258 FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
FQD+VPCKIRAKRGCATHPRSIAERVRRT+ISER+RKLQELVPNM+KQTNTADMLDLAVD
Sbjct: 317 FQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVD 376
Query: 318 YIKDLQNQFKTLSDNRAKCKCS 339
YIKDLQ Q K L+D RA C CS
Sbjct: 377 YIKDLQKQVKVLNDGRASCTCS 398
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 215/424 (50%), Gaps = 85/424 (20%)
Query: 1 MDSSTNH--NYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSF------------- 45
MDSS H + Q N GL R+ SAP++LL + D+ G VN+ SF
Sbjct: 24 MDSSIGHPQQHCHQPNSGLLRYCSAPSSLLASLIDNTIHGCVNEESFTSENHHHQQQQQQ 83
Query: 46 ---------ESERLISRFMNSGGDNSNNSSFQEF---EVKSPV--------------SYG 79
E E ++S+ + S SN+ + QEF VK + SYG
Sbjct: 84 QHYLPSTSSEMETMLSKLLPSNNGWSNSEALQEFGGKPVKQEIGESIPQEPPQQNGYSYG 143
Query: 80 NSQ-----QSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS--------NLVRQSS 126
SQ Q GLP +S + + + S+ S NL RQ S
Sbjct: 144 GSQLIYQSQQIQGLPNGGSSSASGSAFDGSFGVVHSMASEDSIQSKMGIRNCSNLFRQKS 203
Query: 127 SPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSR 186
SPA F S +N A+ +EVGS+ + SNG ++ ST L S + SR S L L +
Sbjct: 204 SPAAFF---SIENDLAALREVGSFKADDVSNGLVTASTGGLHSSHTFSSRPSSCLKRLPQ 260
Query: 187 VSE-----VESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTD---------- 231
++E +E + + N NG ++ Y F+ W +SS F T+
Sbjct: 261 IAENGNESLEENCDQSRNLVNDNGSSKCYIPSFTNELW-ESSAFNAPKTENEDEIMFSTS 319
Query: 232 --MKREQGNGELGN----------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
++ ++ + N S+S +M+++EKFLQ Q SVPCKIRAKRG ATHPRSI
Sbjct: 320 NILESQEADFSFQNLGLTHHLSLPSSSTKMSSIEKFLQIQGSVPCKIRAKRGFATHPRSI 379
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
AERVRRTRISER++KLQ+L P +KQT+TADMLDLAV+YIKDLQ + K LSD +AKCKC+
Sbjct: 380 AERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQKVKILSDCKAKCKCT 439
Query: 340 KIQK 343
+K
Sbjct: 440 SNEK 443
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 149/232 (64%), Gaps = 26/232 (11%)
Query: 128 PAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTK---------RLKSQISIPSRIP 178
PAG L+ NGY S G GV NG + + RLK Q+S SR
Sbjct: 155 PAGFLNHLNMDNGYESMLRQGM--GVGFRNGATNAAAAVDSSGSGGGRLKGQLSFSSRQG 212
Query: 179 SSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-WNDSSHFTESFTDMKREQG 237
S ++S++SE+ S+ G G G ++ Y G+ S W +SS +E+ + MKR +
Sbjct: 213 S---LMSQISEMGSED-LGGSSPEGAGGSRGYIPGYPMSSGWEESSLMSENMSGMKRPRD 268
Query: 238 NGELGNS----------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTR 287
+ E + TS+EMAA+EKFLQFQD+VPCKIRAKRGCATHPRSIAERVRRTR
Sbjct: 269 SSEPAQNGLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTR 328
Query: 288 ISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
ISER+RKLQELVPNMDKQTNTADMLDLAVDYIK+LQ Q K ++++RA C CS
Sbjct: 329 ISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRASCTCS 380
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 212/396 (53%), Gaps = 58/396 (14%)
Query: 1 MDSSTNHNYHQQS-----NPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESE------- 48
MD + H +HQQ N GL + SAP++ L + + SE
Sbjct: 23 MDLNLYHYHHQQQQQIQQNSGLKSYRSAPSSFLESLVNGTSGHNGGNGGVGSEDYRYLRS 82
Query: 49 ------RLISRFMNS--GGDNSNNSSFQEFEVKSPV--SYGNSQQSCSGLPPHYPRQSSA 98
++ R M+S G + N+ + QEFE + + +S+ LP H + ++
Sbjct: 83 SSPGMDTMLKRPMSSCNGSGDFNSQNLQEFEERPAIRQEQEDSEMVYRSLPGHNLVKGNS 142
Query: 99 MD-----------HNSYDLF-LDQSSRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYASTK 145
+ NS DL Q++++ + N SNL RQ+SSPAG+ + NG+A +
Sbjct: 143 VSVGNSLDSAFSVMNSMDLENSKQATKMSTRNGSNLARQNSSPAGILSNHGVDNGFAVMR 202
Query: 146 EVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNG 205
GS+ NG+NG+ +PST RL+S ++ S + L +++E+ + G G+
Sbjct: 203 NAGSFRAGNGTNGEATPSTSRLRSHVNFSSGHRT----LPQIAEIGEEC-IGGSSPEGDF 257
Query: 206 DTQFYSTGFSYGSWNDSSHFTESFTDM-----KREQGNGELGN------------STSAE 248
+ Y F+ +W D+S ++ +M +RE G GN T AE
Sbjct: 258 SKRKYMYNFNSDTWGDASRLKDNDGNMFSGLNRRESQVGNSGNRMTGLTHHLSLPKTVAE 317
Query: 249 MAAVEKFLQFQDS-VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTN 307
MA EKFL FQ + VPCKIRAKRG ATHPRSIAERVRRTRISERMRKLQEL P+MDKQT+
Sbjct: 318 MATAEKFLDFQGNFVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTS 377
Query: 308 TADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
TAD LDL+++ IKDLQ Q K+L+D +AKC CS QK
Sbjct: 378 TADKLDLSIELIKDLQKQVKSLADTKAKCTCSSKQK 413
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 142/231 (61%), Gaps = 34/231 (14%)
Query: 140 GYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGP-THG 198
G+ T+E+G+ N +N + +PS RL +QIS S + S G+L ++SE+ ++ H
Sbjct: 21 GFTPTREMGNLRAGNSTNVEANPSVSRLNNQISFSSGLSSCNGLLPKISEIRNENIGLHS 80
Query: 199 KVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELG-----NSTSAE----- 248
N +++ Y + F+ SW+DS F+ + R + +L NS A+
Sbjct: 81 PKDGNNSNSRCYISNFTTDSWSDSP-----FSGLTRMAADNDLKMFSGLNSLEAQNVDSR 135
Query: 249 ------------------MAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
+ +EKFL FQDSVPCKIRAKRGCATHPRSIAERVRRTRISE
Sbjct: 136 YRSLGLTHHLSLPKNFPQITTIEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 195
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKI 341
RMRKLQEL PNMDKQTNTADMLDLAV+YIKDLQ Q KTL+D + KC CS I
Sbjct: 196 RMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLNDTKVKCTCSSI 246
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 148/226 (65%), Gaps = 26/226 (11%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
SNL+RQSSSPAG L+ NGY + G + L+ S RLK Q+S SR
Sbjct: 133 SNLIRQSSSPAGFLDHLNMDNGYGAMLRAG-----MATADSLAGSGSRLKGQLSFSSRQG 187
Query: 179 SSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS---WNDSSHF-TESFTDMKR 234
S ++S++SE++S+ G G + Y G+ GS W DSS +++ + +KR
Sbjct: 188 S---LMSQISEMDSE-EVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSGLKR 243
Query: 235 EQGNGELGNS-------------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAE 281
+ + E G S TS+EMA+++KFLQFQD+VPCKIRAKRGCATHPRSIAE
Sbjct: 244 PRDSSEPGQSVQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAE 303
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
RVRRT+ISER+RKLQELVPNMDKQTNT+DMLDLAVDYIK+LQ Q K
Sbjct: 304 RVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVK 349
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 153/262 (58%), Gaps = 45/262 (17%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGG------------------VNGSNGDL 160
SNL+RQSSSPAG S NGY + G + G G
Sbjct: 131 SNLIRQSSSPAGFLDHFSMDNGYGAMLRASMGMGFRDGSGGVGGAGGAATDSLAGGGGGG 190
Query: 161 SPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGF--SYGS 218
+ RLK Q+S SR S ++S++SE++S+ G Y G+ S
Sbjct: 191 GSGSGRLKGQLSFSSRQGS---LMSQISEMDSEEIGGSSPEAAAGGRGGYIPGYPMSSAG 247
Query: 219 WNDSSH--FTESFTDMKREQGNGE---------------LGN-----STSAEMAAVEKFL 256
W+DSS ++S + MKR + + E L + TS+EMAA+EKFL
Sbjct: 248 WDDSSSALMSDSLSGMKRPRDSSEPGGQQQQQQQNGGGGLAHQFSLPKTSSEMAAIEKFL 307
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
QFQD+VPCKIRAKRGCATHPRSIAERVRRT+ISER+RKLQELVPNMDKQTNT+DMLDLAV
Sbjct: 308 QFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAV 367
Query: 317 DYIKDLQNQFKTLSDNRAKCKC 338
DYIKDLQ Q K L+++RA C C
Sbjct: 368 DYIKDLQKQVKALNESRASCTC 389
>gi|359478406|ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 411
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 204/383 (53%), Gaps = 92/383 (24%)
Query: 14 NPGLSRFNSAPTALLVNFTD-------------SLESGGV---NKSSFESERLISRFMNS 57
N L R+ SAP++ NF D S E+ + SS E+ER+ SRFM S
Sbjct: 16 NSSLMRYRSAPSSYFSNFIDGEDCEEFLQHRPSSPETERIFSSRPSSPETERIFSRFMAS 75
Query: 58 GG--DNSNNSSF------------------QEFEVKSPVSYGNS--QQSCSGLP------ 89
GG D+S+++ Q+ + + + +G QQ +G
Sbjct: 76 GGTEDSSSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQNGYASGSQMM 135
Query: 90 -------PHYPRQSSAMDHNSYD----LFLDQSSRVK---SVNSNLVRQSSSPAGLFAKL 135
PH+ + NSY + +DQS ++K NSNL+R SSSPAGLF+ L
Sbjct: 136 YQTSSPMPHHNSAAPGTVENSYSAVSSMGMDQSQQIKIGGGNNSNLIRHSSSPAGLFSHL 195
Query: 136 SAQNGYASTKEVGSYGGVNGSNGDLS-PSTKRLKSQISIPSRIPSSLGMLSRVSEVE--- 191
+ +NGYA + +G++G +G+NG+ S S RLK QI+ S PSS G+++ +SE+
Sbjct: 196 NVENGYAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKS 255
Query: 192 --SDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKR--------------- 234
+ P +G G+ ++ + TGF GSW+DS+ +ESF+ +K
Sbjct: 256 MGTGSPDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNAS 315
Query: 235 EQGNGELGN-------------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAE 281
E GE N TSA++ +EK+LQFQDSVPCKIRAKRGCATHPRSIAE
Sbjct: 316 EAQKGEPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAE 375
Query: 282 RVRRTRISERMRKLQELVPNMDK 304
RVRRTRISERMRKLQELVPNMDK
Sbjct: 376 RVRRTRISERMRKLQELVPNMDK 398
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 206/389 (52%), Gaps = 75/389 (19%)
Query: 13 SNPGLSRFNSAPTALLVNFTDSL--ESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEF 70
S+ GL R+ SAP+ LL F D + +S +++ + SRF+ +
Sbjct: 20 SSSGLLRYRSAPSTLLAEFCDDFLPPAAAPRAASPDADNVFSRFLAD----------HQI 69
Query: 71 EVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRV-------KSVNSN--- 120
KSP + G++ + P P ++ H +F ++ ++V+S
Sbjct: 70 RDKSPPANGDADGDAAAHFPDDPTMATQHHHQQQMMFQHHPQQMASGEGLYRTVSSTGID 129
Query: 121 ---------------LVRQSSSPAGLFAKLSAQNGYASTKEVGSY-----------GGVN 154
L+RQSSSPAG L+ NGY S G G N
Sbjct: 130 AATAAANAAGGGGGGLLRQSSSPAGFLNHLNMDNGYGSMLRAGMAAAGGGGGVGFRNGAN 189
Query: 155 GSNGDLSP--STKRLKSQISIPSRIPSSLGMLSRVSEVESD----GPTHGKVRNGNGDTQ 208
+ SP S RLK Q+S SR S ++S++SE++S+ G G G +
Sbjct: 190 AAAAADSPGGSGGRLKGQLSFSSRQGS---LMSQISEMDSEELGGSSPEGAGGGGGGGGR 246
Query: 209 FYSTGFSYGS-WNDSSHFTES-FTDMKREQGNGELGNS----------------TSAEMA 250
Y +G+ S W +SS +++ + +KR++ + E + TS+EMA
Sbjct: 247 GYLSGYPMSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGGGGGLAHQFSLPKTSSEMA 306
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
A+EKFLQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNMDKQTNTAD
Sbjct: 307 AIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTAD 366
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
MLDLAVDYIKDLQ Q K L+D+RA C CS
Sbjct: 367 MLDLAVDYIKDLQKQVKGLNDSRANCTCS 395
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 131/214 (61%), Gaps = 32/214 (14%)
Query: 163 STKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVR----NGNGDTQFYST------ 212
S RLK Q+S PSR S + +S V E DG G N +G + Y
Sbjct: 28 SDARLKGQLSFPSRQGSVMSQISEVGSEELDGGGGGSPEAAGSNASGAPRGYVGIPGYPM 87
Query: 213 -GFSYGSWNDSSHFTESFTDMKREQGNGEL------------------GNSTSAEMAAVE 253
G + G+W+D + + +R + +G G SAEMAA+E
Sbjct: 88 GGGTSGAWSDEPSPSPTSGAKRRPRDSGPAPQNVQQQPLAPQLSLPSGGKPASAEMAAIE 147
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
KFLQFQD+VPCKIRAKRGCATHPRSIAERVRRT+ISER+RKLQELVPNM+KQTNTADMLD
Sbjct: 148 KFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLD 207
Query: 314 LAVDYIKDLQNQFKTLSDNRAKCKCS---KIQKP 344
LAVDYIKDLQ Q K L+D RA C CS K+Q P
Sbjct: 208 LAVDYIKDLQKQVKVLNDGRANCTCSGGGKLQDP 241
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 144/232 (62%), Gaps = 12/232 (5%)
Query: 115 KSVNSNLVRQSSSPAGLFAK---LSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
K +NL+RQSSS G F+ +S NGY K V +Y GV S+G+L+ S L +QI
Sbjct: 88 KGFYTNLLRQSSSHDGHFSNNNIISFGNGYEPMKGVENYDGVKDSDGELTLSMNILNNQI 147
Query: 172 SIPSRIPSSLGMLSRVSEVESDG---PTHGKVRN--GNGDTQFYSTGFSYGSWNDSSHFT 226
R PSS MLS+ + SDG +H R N D Q+Y Y S ND +
Sbjct: 148 GFSPRTPSSFRMLSQNPKTGSDGIGTTSHDDRRQVGSNDDAQYYGHKLVYDS-NDQNVGV 206
Query: 227 ESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 286
+ D + S+EM VEK LQF DSVP IRAKRG ATHPRS+AERVRRT
Sbjct: 207 RNQVDTLSHHLSLP---RKSSEMFVVEKLLQFPDSVPSSIRAKRGFATHPRSLAERVRRT 263
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RISERMRKLQE+VPN+DKQT T++MLDLAV+YIKDLQ Q KT+S RAKC+C
Sbjct: 264 RISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQLKTMSAKRAKCRC 315
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 204/385 (52%), Gaps = 71/385 (18%)
Query: 13 SNPGLSRFNSAPTALLVNFTDSL--ESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEF 70
S+ GL R+ SAP+ LL F D + +S +++ + SRF+ +
Sbjct: 20 SSSGLLRYRSAPSTLLAEFCDDFLPPAAAPRAASPDADNVFSRFLAD----------HQI 69
Query: 71 EVKSPVSYGNSQQSCSGLP-----------------PHYPRQSSAMD-------HNSYDL 106
KSP + + + + P H+P+Q ++++ D
Sbjct: 70 RDKSPPATAAAAAAAAHFPDDPTMATQHHHQQQMMFQHHPQQMASVEGLYRTVSSTGIDA 129
Query: 107 FLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSY---------GGVNGSN 157
++ L+RQSSSPAG L+ NGY S G G N +
Sbjct: 130 ATAAANAAGGGGGGLLRQSSSPAGFLNHLNMDNGYGSMLRAGMAAAGGGVGFRNGANAAA 189
Query: 158 GDLSP--STKRLKSQISIPSRIPSSLGMLSRVSEVESD----GPTHGKVRNGNGDTQFYS 211
SP S RLK Q+S SR S ++S++SE++S+ G G G + Y
Sbjct: 190 AADSPGGSGGRLKGQLSFSSRQGS---LMSQISEMDSEELGGSSPEGAGGGGGGGGRGYL 246
Query: 212 TGFSYGS-WNDSSHFTES-FTDMKREQGNGELGNS---------------TSAEMAAVEK 254
+G+ S W +SS +++ + +KR++ + E + TS+EMAA+EK
Sbjct: 247 SGYPMSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGGGGLAHQFSLPKTSSEMAAIEK 306
Query: 255 FLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDL 314
FLQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNMDKQTNTADMLDL
Sbjct: 307 FLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDL 366
Query: 315 AVDYIKDLQNQFKTLSDNRAKCKCS 339
AVDYIKDLQ Q K L+D+RA C CS
Sbjct: 367 AVDYIKDLQKQVKGLNDSRANCTCS 391
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 198/383 (51%), Gaps = 69/383 (18%)
Query: 6 NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNS 65
+H + + N GL R+ SAP++ +F +S+E +S E+ER++S F+ + ++N
Sbjct: 14 DHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSNNVD 73
Query: 66 SF-------------------QEFEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDL 106
SF +E E + PV+ + + SG P +S S
Sbjct: 74 SFLHHTFNSDGTEKKPPEVKTEEDETEIPVTV-TTMEVVSGEISVNPEESIGYV-ASVSR 131
Query: 107 FLDQSSRVKSVN-----SNLVRQSSSPAGLFAKLSAQNGYAST-KEVGSYGGVNGSN--- 157
L Q+ R + + +NL R +SSPAGLF+ + + YA+ K +G +GG N N
Sbjct: 132 SLGQNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMNTST 191
Query: 158 ---GDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGF 214
L+P +K L P+S M S +SEV+ ++ + S GF
Sbjct: 192 TEASSLTPRSKLLP---------PTSRAM-SPISEVDVKPGFSARL-----PPRTLSGGF 236
Query: 215 SYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAA------------------VEKFL 256
+ N+ S + T + R Q G T E +A +E+ L
Sbjct: 237 NRSFGNEGS-ASSKLTAIARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIEQLL 295
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
DS+PCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+LVPNMD QTNTADMLDLAV
Sbjct: 296 S--DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAV 353
Query: 317 DYIKDLQNQFKTLSDNRAKCKCS 339
YIKDLQ Q KTL + RA+C+CS
Sbjct: 354 QYIKDLQEQVKTLEETRARCRCS 376
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 212/402 (52%), Gaps = 76/402 (18%)
Query: 2 DSSTNHNYHQQSN--PGLSRFNSAPTALLVNFTDSLE------SGG--------VNKSSF 45
DS+ NH+ Q+ N GL R+ SAPT+L + D E +GG + SS
Sbjct: 26 DSTNNHHSQQEHNNSGGLMRYCSAPTSLFASLVDGTEGFNSSNNGGGTREDYRFIRSSSP 85
Query: 46 ESERLISRFM---NSGGDNSNNSSFQEFEVKSPV-----------SYGNSQQSCSGLPPH 91
E E ++SRFM N D+ + + E PV S N++ +G
Sbjct: 86 EVEVILSRFMASCNGKFDSGSGERTVKEETGEPVQQQNGFCNQPSSMVNTRSVDAG--GR 143
Query: 92 YPRQSSAMDHNSYDLFLDQSSRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSY 150
P +S NS D S++ + N SNL RQSSSPAG F+ L A+NG +T+EV +
Sbjct: 144 APVGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSSSPAGFFSHLIAENG-NTTREVDKF 202
Query: 151 GGVNGSNGDLSPSTKRLKSQISIPSRIPSSLG--MLSRVSEVESD-----GPTHGKVRNG 203
G N + D + + R+ SQ+++ S G + ++E E+ G + + +
Sbjct: 203 GTCNRKDVDAAYPSTRIGSQMNLSGH---SFGSNHMPPIAEEENKSIGIVGSSRHRQKAN 259
Query: 204 NGDTQFYSTGFSYGSWNDSSHFTESFTDMKR---------------EQGNGELGNST--- 245
+GD + + F SW++S+ D KR E N + GN+
Sbjct: 260 SGD-RLQTDDFLNSSWDNSA-----MRDTKRGRDNNGRAFATSIVLETQNADSGNNIRGL 313
Query: 246 --------SAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQE 297
S VEKFL+FQ+ VP +IRAKRGCATHPRSIAER+RRTRISER++KLQE
Sbjct: 314 AHHLSLPISFNKDPVEKFLRFQEPVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQE 373
Query: 298 LVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
L P+MDKQT+TADML+LAV+YIK LQ Q KTL+D +AKC CS
Sbjct: 374 LFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 415
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 192/353 (54%), Gaps = 49/353 (13%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL R+ SAP +LL + DSL S S S ++ SG ++SS +V +P
Sbjct: 18 GLIRYGSAPGSLLTSAVDSLVSTDREFSPLGSHHIMPHQYFSG----DSSSESTCKVAAP 73
Query: 76 VSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS--------NLVRQSSS 127
+ +++ +G P ++S F SS +L+R SSS
Sbjct: 74 PDH---KEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSAPSLIRHSSS 130
Query: 128 PAGLFAKLSAQN-GYASTKEVGSY---GGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGM 183
PAG +L+A N G++ T+ G+Y GG NG +G RLKSQ+S + SL
Sbjct: 131 PAGFLNQLTADNCGFSVTRGTGNYSSQGGCNGGHG-----ISRLKSQLSFKRQ--DSLSQ 183
Query: 184 LSRVSEVESDGPTHGKVRNGNGD---TQFYSTG-FSYGSWNDSSHFTESFTDMKREQG-N 238
+S VSE DG + + NG T Y+T F +W++++ S T KR + N
Sbjct: 184 ISEVSENMVDG-----ISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTTPNKRAKNIN 238
Query: 239 GELGNS------------TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRR 285
G++ NS TS EMAAVEK LQ +DSVPCK+RAKRGCATHPRSIAER RR
Sbjct: 239 GDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERR 298
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
TRIS +++KLQ+LVPNMDKQT+ ADMLDLAV +IK LQN+ + L+ C C
Sbjct: 299 TRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTC 351
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 185/352 (52%), Gaps = 34/352 (9%)
Query: 16 GLSRFNSAPTALLVNFT-DSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKS 74
GL R+ SAP+A+L D L+ S+ ++ + SRF+ + S F +
Sbjct: 23 GLLRYRSAPSAVLGGLCEDQLQLPAAAPSA--ADNVFSRFLPDHHIRDDKPSPAHFPSAA 80
Query: 75 PVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKS------VNSNLVRQSSSP 128
++ + Q+ + + L+ SS +++ S+L+RQSSSP
Sbjct: 81 DMASHHQQEQMMFHSQSQSQHQQETGRSGGGLYRTVSSGMEAGGTGVGAASSLIRQSSSP 140
Query: 129 AGLFAKLSAQNGYASTKEVG-----SYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGM 183
AG NGY + GG + S + RL Q+S SR S +
Sbjct: 141 AGFLDHFGMDNGYGAMLRASMGMGFQDGGASDSLAGGGGGSGRLGGQLSFSSRQGS---L 197
Query: 184 LSRVSEVESDGPTHGKVR--NGNGDTQFYSTGFSYGSWNDSSHFTESFTDM-----KR-- 234
+S++SE++S G G G Y G+ S + D KR
Sbjct: 198 MSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWDDSSSALLPDSLPATNKRPR 257
Query: 235 ---EQGNG-----ELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 286
E G G L ++S+E+AA+EKFLQFQD+VPCK+RAKRGCATHPRSIAERVRRT
Sbjct: 258 DSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRT 317
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
+ISER+RKLQELVP+MDKQTNT+DMLDLAVDYIKDLQ Q K L+++RA C C
Sbjct: 318 KISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRASCTC 369
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 145/255 (56%), Gaps = 41/255 (16%)
Query: 118 NSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGS---NGDLSPSTKRLKSQISIP 174
N +L+RQSSSPAG LS NGYAS G GG G NGD RLK Q+S
Sbjct: 151 NDSLLRQSSSPAGFLNHLSMDNGYASMLRAGMAGGGGGGGYRNGD-----ARLKGQLSFS 205
Query: 175 SRIPSSLGMLSRVSEV------ESDGPTHGKVRNGNGDTQFYSTGFSYGS-WNDSSHFT- 226
SR S ++S++SE+ G Y G+ W++ S
Sbjct: 206 SRQGS---VMSQISEMVGEEMGGGGSSGDDDEAGSYGGIPGYPVVAPSGTGWDEPSPSPP 262
Query: 227 -----------ESFTDMKREQGNGE-----------LGNSTSAEMAAVEKFLQFQDSVPC 264
+ RE NG G+ S E+AA+EKFLQFQDSVPC
Sbjct: 263 PSLLTSDGMSGPAAKRRPREAANGRSGQLKPQFSLPAGSKPSPEIAAIEKFLQFQDSVPC 322
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
KIRAKRGCATHPRSIAERVRRT+ISER+RKLQELVPNM+KQTNT+DMLDLAVDYIK+LQ
Sbjct: 323 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQM 382
Query: 325 QFKTLSDNRAKCKCS 339
Q K ++D RA C CS
Sbjct: 383 QVKVMNDGRAGCTCS 397
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 185/352 (52%), Gaps = 34/352 (9%)
Query: 16 GLSRFNSAPTALLVNFT-DSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKS 74
GL R+ SAP+A+L D L+ S+ ++ + SRF+ + S F +
Sbjct: 23 GLLRYRSAPSAVLGGLCEDQLQLPAAAPSA--ADNVFSRFLPDHHIRDDKPSPAHFPSAA 80
Query: 75 PVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKS------VNSNLVRQSSSP 128
++ + Q+ + + L+ SS +++ S+L+RQSSSP
Sbjct: 81 DMASHHQQEQMMFHSQSQSQHQQETGRSGGGLYRTVSSGMEAGGTGVGAASSLIRQSSSP 140
Query: 129 AGLFAKLSAQNGYASTKEVG-----SYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGM 183
AG NGY + GG + S + RL Q+S SR S +
Sbjct: 141 AGFLDHFGMDNGYGAMLRASMGMGFQDGGASDSLAGGGGGSGRLGGQLSFSSRQGS---L 197
Query: 184 LSRVSEVESDGPTHGKVR--NGNGDTQFYSTGFSYGSWNDSSHFTESFTDM-----KR-- 234
+S++SE++S G G G Y G+ S + D KR
Sbjct: 198 MSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWDDSSSALLPDSLPATNKRPR 257
Query: 235 ---EQGNG-----ELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 286
E G G L ++S+E+AA+EKFLQFQD+VPCK+RAKRGCATHPRSIAERVRRT
Sbjct: 258 DSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRT 317
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
+ISER+RKLQELVP+MDKQTNT+DMLDLAVDYIKDLQ Q K L+++RA C C
Sbjct: 318 KISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRASCTC 369
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 213/422 (50%), Gaps = 85/422 (20%)
Query: 1 MDSSTNHNYHQQSNPGLSRFNSAPTALLVNFTDSLES--GGVNKSSF------------- 45
MDS+ + HQQ N GL R+ SAP++LL + ++ + G VN SF
Sbjct: 22 MDSNIGQHCHQQ-NSGLMRYRSAPSSLLTSLVNNNNNNNGYVNGESFRSEHNHHHHQQQQ 80
Query: 46 ----------ESERLISRFMNSGG-------DNSNNSSFQEFEVKSPVSYGNS------Q 82
E E ++++ ++S + + +S Q + + SYG+S
Sbjct: 81 QQHYPPSTSSEMENMLAKLISSNNSEPLQMKEEAGDSVSQPPQQHNGYSYGSSPQMMYQT 140
Query: 83 QSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS------------NLVRQSSSPAG 130
Q GLP P S +++D + + S NS NL+RQ SSPAG
Sbjct: 141 QQIQGLP--IPNGSLGASGSAFDGSFSAVNSLASQNSTQPKMGASTNCNNLIRQKSSPAG 198
Query: 131 LFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSE- 189
F+ S N A+ ++V S+ G + SNG S+ L ++ SR S + +++E
Sbjct: 199 FFSNYSVDN--AALRDVASFRGCDVSNGQAITSSSGLHGTLNFSSRPSSCSTRMPQIAEN 256
Query: 190 ----VESDGPTHGKVRNGN-GDTQFYSTGFSYGSWNDSSHFTESFT-------------- 230
VE++ +RN N +T+ Y F+ W D S F+ S T
Sbjct: 257 GNEDVEANCVESRNLRNDNINNTKCYMPSFTTDFW-DGSAFSASRTASNSGEISFSTSKA 315
Query: 231 -DMKREQ-GNGELGNS-------TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAE 281
D++ E G ++G + +S+ MA +EK Q Q SVPCKIRAKRG ATHPRSIAE
Sbjct: 316 MDIQDEDFGYQKVGLTHHLSLPGSSSRMATMEKLYQIQGSVPCKIRAKRGFATHPRSIAE 375
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKI 341
R RRTRIS R++KLQ+L P DKQT+TADMLDLAV+YIKDLQ Q K L D RAKC C+
Sbjct: 376 RERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQVKILRDTRAKCTCTSN 435
Query: 342 QK 343
QK
Sbjct: 436 QK 437
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 188/349 (53%), Gaps = 45/349 (12%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL R+ SAP +LL + DSL S S S ++ SG D+S+ S+ + V +P
Sbjct: 75 GLIRYGSAPGSLLTSAVDSLVSTDREFSPLGSHHIMPHQYFSG-DSSSESTCK---VAAP 130
Query: 76 VSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS--------NLVRQSSS 127
+ +++ +G P ++S F SS +L+R SSS
Sbjct: 131 PDH---KEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSAPSLIRHSSS 187
Query: 128 PAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRV 187
PAG +L+A N T S GG NG +G RLKSQ+S + SL +S V
Sbjct: 188 PAGFLNQLTADNLTRGTGNYSSQGGCNGGHG-----ISRLKSQLSFKRQ--DSLSQISEV 240
Query: 188 SEVESDGPTHGKVRNGNGD---TQFYSTG-FSYGSWNDSSHFTESFTDMKREQG-NGELG 242
SE DG + + NG T Y+T F +W++++ S T KR + NG++
Sbjct: 241 SENMVDG-----ISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTTPNKRAKNINGDIL 295
Query: 243 NS------------TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
NS TS EMAAVEK LQ +DSVPCK+RAKRGCATHPRSIAER RRTRIS
Sbjct: 296 NSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRIS 355
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
+++KLQ+LVPNMDKQT+ ADMLDLAV +IK LQN+ + L+ C C
Sbjct: 356 GKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTC 404
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 213/399 (53%), Gaps = 69/399 (17%)
Query: 1 MDSST----NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNK------------SS 44
MDSS+ +Y QQ++ L R+NSAPT+L N D+ +N +S
Sbjct: 14 MDSSSIIHSKQHYQQQNSGLLMRYNSAPTSLFTNLIDNNAQNFINNEESFTNESYLPSTS 73
Query: 45 FESERLISRFMNSG-GDNSNNSSFQEFEVK-------SPVSYGNSQQSCSGLPPHYPRQS 96
E + ++S+ ++S G N++ + QEF+VK V+ N S G Y S
Sbjct: 74 SEMDTMLSKLVSSNNGWNNSEENLQEFDVKPVKQEIGESVAQQNGNYSYGGSELIYQGFS 133
Query: 97 SAMDHNSYDLF-------LDQS--SRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYAST-- 144
+ + Y F D S S++ N SNL+RQ SSPA F S +NG+A+
Sbjct: 134 NGSGNGFYGSFGGVNTMESDDSNQSKIGVRNCSNLIRQKSSPAEFF---SNENGFATLTL 190
Query: 145 KEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSR--VSEVESDGPTHGKVRN 202
+EV S+ SNG L+ S++ PS + ++ + +ES+ + N
Sbjct: 191 REVESFKANGISNGTLNFSSR--------PSTCLKRMPQIAENGIQSLESNCDQTINLVN 242
Query: 203 GNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNG-----------ELG-------NS 244
NG ++F + + ++N +H TE+ ++ NG LG S
Sbjct: 243 ENGSSKFTNEFWDNSAFN--AHKTENEDEIMFSTTNGLDSQEADFGYQNLGLTHHLSLPS 300
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
+S +M ++EKFLQ Q SVPCKIRAKRG ATHPRSIAERVRRTRIS+R++KLQ L P DK
Sbjct: 301 SSTKMTSMEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDK 360
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
QT+TADMLDLAV+YIKDLQ Q + L+D + KCKC+ +K
Sbjct: 361 QTSTADMLDLAVEYIKDLQEQVQILTDCKDKCKCASHEK 399
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 213/399 (53%), Gaps = 69/399 (17%)
Query: 1 MDSST----NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNK------------SS 44
MDSS+ +Y QQ++ L R+NSAPT+L N D+ +N +S
Sbjct: 11 MDSSSIIHSKQHYQQQNSGLLMRYNSAPTSLFTNLIDNNAQNFINNEESFTNESYLPSTS 70
Query: 45 FESERLISRFMNSG-GDNSNNSSFQEFEVK-------SPVSYGNSQQSCSGLPPHYPRQS 96
E + ++S+ ++S G N++ + QEF+VK V+ N S G Y S
Sbjct: 71 SEMDTMLSKLISSNNGWNNSEENLQEFDVKPVKQEIGESVAQQNGNYSYGGSELIYQGFS 130
Query: 97 SAMDHNSYDLF-------LDQS--SRVKSVN-SNLVRQSSSPAGLFAKLSAQNGYAST-- 144
+ + Y F D S S++ N SNL+RQ SSPA F S +NG+A+
Sbjct: 131 NGSGNGFYGSFGGVNTMESDDSNQSKIGVRNCSNLIRQKSSPAEFF---SNENGFATLTL 187
Query: 145 KEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSR--VSEVESDGPTHGKVRN 202
+EV S+ SNG L+ S++ PS + ++ + +ES+ + N
Sbjct: 188 REVESFKANGISNGTLNFSSR--------PSTCLKRMPQIAENGIQSLESNCDQTINLVN 239
Query: 203 GNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNG-----------ELG-------NS 244
NG ++F + + ++N +H TE+ ++ NG LG S
Sbjct: 240 ENGSSKFTNEFWDNSAFN--AHKTENEDEIMFSTTNGLDSQEADFGYQNLGLTHHLSLPS 297
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
+S +M ++EKFLQ Q SVPCKIRAKRG ATHPRSIAERVRRTRIS+R++KLQ L P DK
Sbjct: 298 SSTKMTSMEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDK 357
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
QT+TADMLDLAV+YIKDLQ Q + L+D + KCKC+ +K
Sbjct: 358 QTSTADMLDLAVEYIKDLQEQVQILTDCKDKCKCASHEK 396
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 196/386 (50%), Gaps = 74/386 (19%)
Query: 6 NHNYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNS 65
+H + + N GL R+ SAP++ +F +S+E +S E+ER++S F+ + + N
Sbjct: 14 DHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDNVD 73
Query: 66 SFQEF------------EVKS-------PVSYGNSQQ----SCSGLPPHYPRQS----SA 98
SF EVK+ PV+ + S G P S ++
Sbjct: 74 SFLHHTFNSDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDGEISVNPEVSIGYVAS 133
Query: 99 MDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYAST-KEVGSYGGVN--- 154
+ N D + V +NL R +SSPAGLF+ + + YA+ K +G +GG N
Sbjct: 134 VSRNKRPREKDDRTPV----NNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMS 189
Query: 155 GSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGD---TQFYS 211
SN + S T R K +P + +S +SEV+ V+ G + S
Sbjct: 190 TSNTEASSLTPRSK-------LLPPTSRAMSPISEVD--------VKPGFSSRLPPRTLS 234
Query: 212 TGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAA------------------VE 253
GF+ N+ S + T + R Q G T E +A +E
Sbjct: 235 GGFNRSFGNEGS-ASSKLTALARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIE 293
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
+ L DS+PCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQ+LVPNMD QTNTADMLD
Sbjct: 294 QLLS--DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLD 351
Query: 314 LAVDYIKDLQNQFKTLSDNRAKCKCS 339
LAV YIKDLQ Q K L ++RA+C+CS
Sbjct: 352 LAVQYIKDLQEQVKALEESRARCRCS 377
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 214/423 (50%), Gaps = 88/423 (20%)
Query: 1 MDSSTNH--NYHQQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSF------------- 45
MDSS H + QSN GL R+ SAP+++L + D+ G VN+ F
Sbjct: 24 MDSSIGHPQQHCHQSNSGLLRYCSAPSSMLASLIDNTIHGCVNEEPFTSENQQQQQHYLP 83
Query: 46 ----ESERLISRFMNSGGDNSNNSSFQEF---EVKSPV--------------SYGNSQ-- 82
E E ++S+ S SN+ QEF VK + SYG SQ
Sbjct: 84 STSSEMETMLSKMPPSNIGWSNSEPLQEFGGKPVKQEIGQSVPQGPPKQNGYSYGGSQLI 143
Query: 83 ---QSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS-----------NLVRQSSSP 128
Q GLP SS +++D + + S +S NL RQ SSP
Sbjct: 144 YQSQQIQGLP----NGSSIASISAFDGSFGAVNSMASEDSIQSKMGVRNCSNLFRQKSSP 199
Query: 129 AGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLG-MLSRV 187
AG F S +N A+ +EVGS+ + SNG + ST L S ++ SR S L M ++
Sbjct: 200 AGFF---SIENDLAALREVGSFKDNDVSNGQATASTSGLHSSLTFSSRSSSCLKQMPPQI 256
Query: 188 SE-----VESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKRE------- 235
+E +E + + N NG ++ Y F+ W +SS F T+ + E
Sbjct: 257 AENGNESLEENYDQSRNLVNDNGSSKCYIPSFTNEFW-ESSAFNAPKTENEDEIMFSTSN 315
Query: 236 -----------QGNGELGN----STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
Q +G + S+S +M+++E FLQ Q SVP KIRAKRG ATHPRSIA
Sbjct: 316 GLESQETDFSYQNHGLTHHLSLPSSSTKMSSIEMFLQIQGSVPYKIRAKRGFATHPRSIA 375
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSK 340
ER RRTRISER++KLQ+L P +K T+TADMLDLAV++IKDLQ Q + LSD +AKCKC++
Sbjct: 376 ERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQVQILSDRKAKCKCTR 435
Query: 341 IQK 343
+K
Sbjct: 436 NEK 438
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 90/95 (94%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
TS+EMAA+EKFLQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNMDK
Sbjct: 48 TSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDK 107
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
QTNTADMLDLAVDYIKDLQ Q K L+D+RA C CS
Sbjct: 108 QTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCS 142
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 146/264 (55%), Gaps = 49/264 (18%)
Query: 118 NSNLVRQSSSPAGLFAKLSAQNGYASTKEVG-SYGGVNGSNGDLSPSTKRLKSQISIPSR 176
NS L+RQSSSPA L+ NGY + G S GG NG+ RLK Q+S S
Sbjct: 144 NSLLLRQSSSPADFLNHLNMDNGYGNMLRAGMSGGGGGFRNGE----APRLKGQLSFSSS 199
Query: 177 IPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYS---------------TGFSYGSWND 221
S M+S++SE+ + G N + D + S S W+D
Sbjct: 200 RQGS--MMSQISEMVGEE-LGGGGGNSSADDEAGSNGGYGIPGPGGYPMGGAASSAGWDD 256
Query: 222 SSHFTESFTD-----------MKREQGNGELGNS---------------TSAEMAAVEKF 255
S D +R G G S TS EMAA+EKF
Sbjct: 257 PSPSPLLSVDSLQSSGPAAAAKRRRDSPGNNGASVPPIKHQLSLPPSGKTSPEMAAIEKF 316
Query: 256 LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
LQFQD+VPCKIRAKRGCATHPRSIAERVRRT+ISER+RKLQELVPNM+KQTNT+DMLDLA
Sbjct: 317 LQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLA 376
Query: 316 VDYIKDLQNQFKTLSDNRAKCKCS 339
VDYIK+LQ Q K ++D RA C CS
Sbjct: 377 VDYIKELQMQVKVMNDGRASCTCS 400
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 187/347 (53%), Gaps = 45/347 (12%)
Query: 13 SNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEV 72
S GL+RF SAP + L DS+ G S + L++ N+ +NS++ F
Sbjct: 49 SGSGLTRFGSAPGSFLTRAVDSVI--GTTTSGRDFSALVNNNSNNNNNNSHHQYF----- 101
Query: 73 KSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDL------FLDQSSRVKSVNSNLVRQSS 126
S G+S + +S+ ++S DL L +S +N +L+RQ S
Sbjct: 102 ----SAGDSSSLTT--------ESTCKVNSSNDLRAPAKSGLQRSYGFNEINGSLLRQKS 149
Query: 127 SPAGLFAK-LSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLS 185
SPAG + L+ +NG++ T G Y NG NG + S RLKSQ+S + SL +S
Sbjct: 150 SPAGFLSHHLANENGFSITPGTGGYNSSNGPNGGHTVS--RLKSQLSFTRQ--DSLSQIS 205
Query: 186 RVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQG-NGELGNS 244
VSE +G + + N + +TGF GSW+ ++ S KR + +G+L N
Sbjct: 206 EVSEDIVEG-INSNTGHHNSPHSYSTTGFGMGSWDGTNSIVFSGPPSKRMKNIDGDLFNC 264
Query: 245 ------------TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISER 291
TS EMA VEK L +DSVPCKIRAKRGCATHPRSIAER RRTRIS R
Sbjct: 265 LNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGR 324
Query: 292 MRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
++KLQ+LVPNMDKQT+ ADMLDLAV +IK LQ + + L C C
Sbjct: 325 LKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTC 371
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 206/429 (48%), Gaps = 103/429 (24%)
Query: 1 MDSSTNHNYHQQSNPGLSRFNSAPTALLVNFTDSLES-------GGVNKSSF-------- 45
MDS+ + HQQ N GL R+ SAP++LL + ++ G VN +F
Sbjct: 22 MDSNIGQHCHQQ-NSGLMRYRSAPSSLLTSLANNNNINNNTTTNGCVNGKAFRSVHNHHQ 80
Query: 46 ----------ESERLISRFMNSGGDNSNNSSFQEFEVKSP---------VSYGNS----- 81
E E ++++ ++S +NS +E V S SYG+S
Sbjct: 81 QQRYPPSTSSEMETMLAKLISS--NNSEPLQVKEEAVASVSQPPQQHNGYSYGSSPQMMY 138
Query: 82 -QQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS------------NLVRQSSSP 128
Q GLP P S N++D + + S NS NL+RQ SSP
Sbjct: 139 QTQQIQGLP--MPNGSLG---NAFDGSFSAVNSLASQNSTQPRLGASTNCNNLIRQKSSP 193
Query: 129 AGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKS-QISIPSRIPSSLGMLSRV 187
AG F+ S N + ++V S+ G + SNG S+ L +++ SR S + ++
Sbjct: 194 AGFFSNYSVDN---AMRDVASFRGCDVSNGQAITSSSGLHGGTLNLSSRPSSCSTRMPQI 250
Query: 188 SE-----VESDGPTHGKVRNGN-GDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGEL 241
+E VE + +RN N T+ Y F+ W+ SS + ++ NGE+
Sbjct: 251 AENGNEGVEGNYVESRNLRNDNINSTKCYMPSFTTDFWDGSSFSPRTASN------NGEI 304
Query: 242 GNSTSAEM---------------------------AAVEKFLQFQDSVPCKIRAKRGCAT 274
STS M A +EKF Q Q SVPCKIRAKRG AT
Sbjct: 305 SFSTSNAMDIQGEDFGYQKVGLTHHSSLPGSSSRVATMEKFYQIQGSVPCKIRAKRGFAT 364
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRA 334
HPRSIAER RRTRIS R++KLQ+L P DKQT+TADMLDLAV+YIKDLQ Q K L D RA
Sbjct: 365 HPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQVKMLRDTRA 424
Query: 335 KCKCSKIQK 343
KC C+ QK
Sbjct: 425 KCTCTSNQK 433
>gi|42571193|ref|NP_973670.1| transcription factor bHLH130 [Arabidopsis thaliana]
gi|330255006|gb|AEC10100.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 300
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 177/329 (53%), Gaps = 79/329 (24%)
Query: 1 MDSSTNHNYHQQSNP---GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNS 57
MDS+ NH Y NP GL RF SAP+++L F D +K F+S+RL+SRF+ S
Sbjct: 1 MDSN-NHLY--DPNPTGSGLLRFRSAPSSVLAAFVDD------DKIGFDSDRLLSRFVTS 51
Query: 58 GGDNSNNSSFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQSSA-MDH 101
G N + S +FE KSPVS N+ S + GLPPHYPRQS M+
Sbjct: 52 NGVNGDLGS-PKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNS 110
Query: 102 NSYDLFLD-QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDL 160
D FL + K V SNL+RQSSSPAG+F LS QNGY S + + +Y +
Sbjct: 111 VGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNY-----EEDEE 165
Query: 161 SPS-TKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSW 219
SPS + L+ S+ SR PSSLGMLS++ E+ + T F Y W
Sbjct: 166 SPSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPE------------------TNFPYSHW 207
Query: 220 NDSSHFTESFTDMKREQG----------NGELGN---------------STSAEMAAVEK 254
ND S F ++ + +KRE NGE GN ST+++M +V+K
Sbjct: 208 NDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDK 267
Query: 255 FLQFQDSVPCKIRAKRGCATHPRSIAERV 283
+LQ QDSVPCKIRAKRGCATHPRSIAERV
Sbjct: 268 YLQLQDSVPCKIRAKRGCATHPRSIAERV 296
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 150/264 (56%), Gaps = 48/264 (18%)
Query: 112 SRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
S + ++L+RQSSSPAG L+ NGY + + G G GD RLK Q+
Sbjct: 140 STAAAAGNSLLRQSSSPAGFLNHLTMDNGYGRNM-LRAGMGGGGGGGD-----PRLKGQL 193
Query: 172 SIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSY-------------GS 218
S SR S ++S++SE+ S+ ++ G G + S G +
Sbjct: 194 SFSSRQGS---VMSQISEMGSE---DEELAGGGGSPEAGSNGGGAARGGYGGGYAMGSSA 247
Query: 219 WNDSSHFTESFT------------DMKRE-----------QGNGELGNSTSAEMAAVEKF 255
W + S S D+ R+ + + S EMAA+EKF
Sbjct: 248 WEEPSPPATSLLPDSSLPSKRPRDDLPRQLSLPAASKSSSKPPSSASAAASPEMAAIEKF 307
Query: 256 LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
LQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNM+KQTNTADMLDLA
Sbjct: 308 LQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLA 367
Query: 316 VDYIKDLQNQFKTLSDNRAKCKCS 339
VDYIK+LQ Q K L+D+R+ C CS
Sbjct: 368 VDYIKELQKQVKVLNDSRSSCTCS 391
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 196/380 (51%), Gaps = 100/380 (26%)
Query: 10 HQQSNP-----GLSRFNSAPTALLVNFTD-SLESGGVNK-SSFESERLISRFMNSGGDNS 62
HQQ P GL+RF SAP++ N D NK SS E+ER+ SRF+NS G +
Sbjct: 6 HQQQQPQVNSSGLTRFKSAPSSYFNNIIDREFYEHVFNKPSSPETERVFSRFINSFGSDD 65
Query: 63 N--------NSSFQEFE-----------------------VKSPVSYGNSQQSCSG---- 87
+ +S+ +E E V +Y NS S G
Sbjct: 66 DLLAQKISVDSTVKEEEEVNINQQQQQQDQGLASINNEHVVHQQSNYNNSVPSSHGFYQS 125
Query: 88 --LPPHYPRQ--SSAMDHNSYDLFLDQSSRVKSV---NSNLVRQSSSPAGLFAKLSAQNG 140
+PP P Q SS +D S+ + +++ +VK+ NSNL+R SSSPAGLF++++ +NG
Sbjct: 126 SMMPP-LPNQNVSSGLD-GSFSMGVNRLQQVKNHGGNNSNLIRHSSSPAGLFSQINIENG 183
Query: 141 YASTKEVGSYGGVNGSNGDLSPSTKR-LKSQISIPSRIPSSLGMLSRVSEVESDGPTHGK 199
Y S + +G+ G VN S + ST R LK+Q + S G++S + EV G
Sbjct: 184 YVSMRGMGTLGAVNNSMKEAKFSTARSLKNQSNYSS------GLMSTIDEV-------GD 230
Query: 200 VRNGNGDTQFYSTGFSYG---------SWNDSSHFTESFTDMKR---------------- 234
N + + + G S+G +W+DS +E+ +KR
Sbjct: 231 KDNRENNLENEAFGESHGNEYMDYPVDTWDDSEMMSENVGGLKRFRDNDSKQQFSGLNVQ 290
Query: 235 -EQGNGELGN---------STSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVR 284
E G G + +TS+EMAA+EKFL F DSVP KIRAKRGCATHPRSIAERVR
Sbjct: 291 NETGGGHSNSPLAHQLSMPNTSSEMAAMEKFLHFSDSVPMKIRAKRGCATHPRSIAERVR 350
Query: 285 RTRISERMRKLQELVPNMDK 304
RT+ISERMRKLQ+LVPNMDK
Sbjct: 351 RTKISERMRKLQDLVPNMDK 370
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 177/340 (52%), Gaps = 41/340 (12%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL+R+ SAP + L DS+ S S L+ R + GD+ + +S +V S
Sbjct: 20 GLTRYGSAPGSFLTRAVDSVIGADRELSGLGSTPLVGRQQHFSGDSPSITSESTCKVNS- 78
Query: 76 VSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKL 135
SC P SY L + + +LVRQ SSPAG + L
Sbjct: 79 -------SSCDRKAPK--SGGGGGLQRSYGL-----NEIAHGAGSLVRQRSSPAGFLSHL 124
Query: 136 SAQNG-YASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSE--VES 192
+ +NG ++ T+ G Y NGS G S RLKSQ+S + SL +S VSE VE
Sbjct: 125 ATENGGFSITRGTGGYNSRNGSGGGPS----RLKSQLSFTRQ--DSLSQISEVSENVVEG 178
Query: 193 DGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQ-GNGELGNS------- 244
G +G + N + + F SW+ + S K+ + G+G++ +
Sbjct: 179 IGSDNG---SQNSTHSYSAASFGMESWDTPNSIVFSGHPSKQARTGDGDIYSCFNALETQ 235
Query: 245 -----TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 298
TS EMA VEK LQ +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++ LQ+L
Sbjct: 236 FSLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDL 295
Query: 299 VPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
VPNMDKQT+ ADML+LAV +IK LQN+ + L C C
Sbjct: 296 VPNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTC 335
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 178 bits (451), Expect = 4e-42, Method: Composition-based stats.
Identities = 88/99 (88%), Positives = 90/99 (90%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
TS EM A+EKFL QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK
Sbjct: 9 TSVEMVAMEKFLHLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 68
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
QTNTADMLDLAVDYIKDLQ Q+KTLSDNRA CKC QK
Sbjct: 69 QTNTADMLDLAVDYIKDLQKQYKTLSDNRANCKCLSKQK 107
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 146/242 (60%), Gaps = 27/242 (11%)
Query: 112 SRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
S + ++L+RQSSSPAG L+ NGY + G GG G + RLK Q+
Sbjct: 142 STAAAAGNSLLRQSSSPAGFLNHLTMDNGYGNMLRAGMGGGGGGGD-------PRLKGQL 194
Query: 172 SIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTES--- 228
S SR S ++S++SE+ S+ ++ G G + S G S
Sbjct: 195 SFSSRQGS---VMSQISEMGSE---DEELAGGGGSPEAGSNGGGAARGGYGGGSLPSKRP 248
Query: 229 FTDMKRE-----------QGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPR 277
D+ R+ + + S EMAA+EKFLQFQD+VPCKIRAKRGCATHPR
Sbjct: 249 RDDLPRQLSLPAASKNSSKPPSSASAAASPEMAAIEKFLQFQDAVPCKIRAKRGCATHPR 308
Query: 278 SIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCK 337
SIAERVRRTRISER+RKLQELVPNM+KQTNTADMLDLAVDYIK+LQ Q K L+D+R+ C
Sbjct: 309 SIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSSCT 368
Query: 338 CS 339
CS
Sbjct: 369 CS 370
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 148/264 (56%), Gaps = 49/264 (18%)
Query: 112 SRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
S + ++L+RQSSSPAG L+ NGY + G GG G + RLK Q+
Sbjct: 142 STAAAAGNSLLRQSSSPAGFLNHLTMDNGYGNMLRAGMGGGGGGGD-------PRLKGQL 194
Query: 172 SIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSY-------------GS 218
S SR S ++S++SE+ S+ ++ G G + S G +
Sbjct: 195 SFSSRQGS---VMSQISEMGSE---DEELAGGGGSPEAGSNGGGAARGGYGGGYAMGSSA 248
Query: 219 WNDSSHFTESF---TDMKREQGNGELGNSTSAEMAA--------------------VEKF 255
W + S S + + ++ +L S A+ +EKF
Sbjct: 249 WEEPSPPATSLLPDSSLPSKRPRDDLPRQLSLPAASKNSSKPPSSASAAASPEMAAIEKF 308
Query: 256 LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
LQFQD+VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQELVPNM+KQTNTADMLDLA
Sbjct: 309 LQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLA 368
Query: 316 VDYIKDLQNQFKTLSDNRAKCKCS 339
VDYIK+LQ Q K L+D+R+ C CS
Sbjct: 369 VDYIKELQKQVKVLNDSRSSCTCS 392
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 94/109 (86%), Gaps = 5/109 (4%)
Query: 235 EQGNG-----ELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
E G G L ++S+E+AA+EKFLQFQD+VPCK+RAKRGCATHPRSIAERVRRT+IS
Sbjct: 158 EHGGGLAHQFSLPKTSSSEVAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKIS 217
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
ER+RKLQELVP+MDKQTNT+DMLDLAVDYIKDLQ Q K L+++RA C C
Sbjct: 218 ERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRASCTC 266
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 144/253 (56%), Gaps = 53/253 (20%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
SNL+RQ SSPAG F S NG+A+T G+NG+ SR+P
Sbjct: 17 SNLIRQKSSPAGFF---SNANGFAAT------SGLNGTEN--------------FSSRLP 53
Query: 179 SSLGMLSRVSEVESD-------GPTHGKVRNGNGDTQFYSTGFSYGSWNDS---SHFTES 228
SS L+R+ ++ + + N N ++ Y F+ W++S S TE
Sbjct: 54 SSC--LTRMPQIAENRNESLEINCDQSNLENYNSSSKSYMPSFTSEIWDNSAFHSQKTEC 111
Query: 229 FTDMKREQGNG-----------ELGN-------STSAEMAAVEKFLQFQDSVPCKIRAKR 270
++ NG LG S SA++A+++KFLQ Q SVPCKIRAKR
Sbjct: 112 EDEIVFSTSNGLESQEEDFCYQNLGLTHHLSVLSPSAKIASIKKFLQIQGSVPCKIRAKR 171
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G ATHPRS+AERVRRTRISE+++KL+ L P DKQT+TADMLD AV+YIKDLQ Q KTL+
Sbjct: 172 GFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQVKTLT 231
Query: 331 DNRAKCKCSKIQK 343
D R KCKC++ +K
Sbjct: 232 DCREKCKCTRNEK 244
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 147/248 (59%), Gaps = 31/248 (12%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYAST-KEVGSYGGV--NGSNGDLSPSTKRLKSQISIPSRI 177
L R +SSP G F+ NG++S+ + GS G +G+ S + K++K+ +S S
Sbjct: 113 LTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSR 172
Query: 178 PSSLGMLSRVSE---------VESDGPTHGKVRNGNGDTQ------FYSTGFSYGSWNDS 222
S G LS++SE + HG+ N T F S GFS GSW DS
Sbjct: 173 QGS-GGLSQISEDGIPDLTDSIHGAAHHHGRSEE-NVSTHDHVVRSFSSGGFSIGSWEDS 230
Query: 223 SHFTESFTDMKR-EQGNGELGNSTS---------AEMAAVEKFLQFQ-DSVPCKIRAKRG 271
+ S + K GN ++ + S EMA VEK+LQ Q D VP ++RAKRG
Sbjct: 231 NSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRG 290
Query: 272 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSD 331
CATHPRSIAER RRTRISE++RKLQ LVPNMDKQT+T+DMLDLAVD+IK LQ+Q +TL +
Sbjct: 291 CATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKE 350
Query: 332 NRAKCKCS 339
++ KC CS
Sbjct: 351 DKEKCTCS 358
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 186/351 (52%), Gaps = 47/351 (13%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMN--SGGDNSNNSSFQEFEVK 73
GL+R+ SAP +LL DS+ G + +SRF + S G S SS + +
Sbjct: 21 GLARYGSAPGSLLAAIADSVTRG---DPAPPPPPPVSRFYSAESSGLTSCESSCRTDCGR 77
Query: 74 SPV--SYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGL 131
P+ +YG S + +PP +Q + S L R SSSPAGL
Sbjct: 78 PPLERAYGGSGEI--RVPPPLQQQQHHL-------------LAPPAASPLFRHSSSPAGL 122
Query: 132 FAKL-SAQNGYASTK-EVGSYGGVNGSNGDLSPSTKRLKSQISIPSR-IP--SSLGML-S 185
++L + +G A+T +GSY GS+ L +L SQ S + +P S +GM+ +
Sbjct: 123 LSRLMTDPHGMAATGGAMGSYTQA-GSDAALGHGHAQLSSQWSFSRQDLPQISEMGMIPA 181
Query: 186 RVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELG--- 242
+ E + + + S FS GSW+D++ S K+ + + G
Sbjct: 182 DIGESIVGAGGCNSSSDAAQSSSYLSRTFSVGSWDDTNSIMFSSAPCKKPKVDPAAGADD 241
Query: 243 --------------NSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRTR 287
+++S E+ ++ +LQ Q DSV C++RA+RGCATHPRSIAER RRTR
Sbjct: 242 MVTNFSTIDPQFGLSNSSLELPGMDDYLQLQQDSVACRVRARRGCATHPRSIAERERRTR 301
Query: 288 ISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
IS+R++KLQ+LVPNMDKQTNT+DMLDLAVDYIK+L++Q + L ++A C C
Sbjct: 302 ISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQVEKLKHDQANCCC 352
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 167 bits (424), Expect = 5e-39, Method: Composition-based stats.
Identities = 82/101 (81%), Positives = 94/101 (93%), Gaps = 1/101 (0%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
T+AE++A+EKFLQFQDSVPC+ RAKRGCATHPRSIAERVRRTRISERMRKLQ+LVPNMDK
Sbjct: 11 TAAEISAIEKFLQFQDSVPCRTRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDK 70
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC-SKIQKP 344
QTNT+DMLDLAVDYIKDLQ Q +TLS+ RA+C C +K Q+P
Sbjct: 71 QTNTSDMLDLAVDYIKDLQRQVQTLSEIRARCACINKQQQP 111
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 149/284 (52%), Gaps = 69/284 (24%)
Query: 121 LVRQSSSPAGLFAKLSAQ------NGYASTKEVGSYGGVNGSNGDL-------------- 160
L+R SSSPAGL ++L A+ +G+ S G V S GD+
Sbjct: 263 LIRHSSSPAGLLSELVAEGRGTFESGFMEGTVRNSIG-VGNSCGDIIIPNRVQRQMNRLQ 321
Query: 161 SPSTKRLKSQISIPSRIPS-----SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFS 215
S+ L SQ+S+ +P ++ M+ +E ++ + Q Y + FS
Sbjct: 322 QNSSPGLLSQLSVDMSVPEMVDRLNMAMVGSSAENQAGSSSDDSSLGSGNAGQGYISNFS 381
Query: 216 YGSWNDSSHFTESFT-----------------DMKREQG--NGE---------------- 240
SW+D + +F DMK QG N +
Sbjct: 382 VKSWDDEAMTPGNFAGMQNGANFTARKRAKELDMKLMQGLNNSDHQKVEGGIRGASALTN 441
Query: 241 ----LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQ 296
L STS+E+A +E+FLQ D+VPCK+RAKRGCATHPRSIAERVRRTRISERMRKLQ
Sbjct: 442 HPYNLPRSTSSELA-MEEFLQ--DAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQ 498
Query: 297 ELVPNMDKQT-NTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
ELVPN DKQT N ADMLD AV+Y+K LQ Q + L++NRAKC C+
Sbjct: 499 ELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELAENRAKCTCT 542
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 114/185 (61%), Gaps = 19/185 (10%)
Query: 169 SQIS---IPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSHF 225
SQIS IP S G E + TH V F S GFS GSW DS+
Sbjct: 28 SQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRS-----FSSGGFSIGSWEDSNSI 82
Query: 226 TESFTDMKR-EQGNGELGNSTS---------AEMAAVEKFLQFQ-DSVPCKIRAKRGCAT 274
S + K GN ++ + S EMA VEK+LQ Q D VP ++RAKRGCAT
Sbjct: 83 VFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCAT 142
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRA 334
HPRSIAER RRTRISE++RKLQ LVPNMDKQT+T+DMLDLAVD+IK LQ+Q +TL +++
Sbjct: 143 HPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKE 202
Query: 335 KCKCS 339
KC CS
Sbjct: 203 KCTCS 207
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 134/235 (57%), Gaps = 23/235 (9%)
Query: 121 LVRQSSSPAGLFAKLSA-QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPS 179
L RQ SSPA LF LS +N ++ + Y GSN S RLKSQ+S S P
Sbjct: 130 LARQRSSPADLFTYLSGDKNNFSLNQPTSDYNPQGGSNAGRGQS--RLKSQLSFTSHDP- 186
Query: 180 SLGMLSRVSEVESDGPTHGKVRNGNGDT-QFYSTGFSYGSWNDSSH---FTESFTDMKRE 235
LSR+SEV V +G+G + S G SW+D S FT + KR
Sbjct: 187 ----LSRISEV-----NETSVHDGSGHSFSVASFGAPTDSWDDGSGSIGFTVTTRPTKRS 237
Query: 236 QGN-----GELGNSTSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
+ + + M ++ ++Q +DSVPCKIRAKRGCATHPRSIAER RRTRIS
Sbjct: 238 KDMDSGLFSQYSLPSDTSMNYMDNYMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRIS 297
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKP 344
+++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ+Q + L + C C ++P
Sbjct: 298 GKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKEQENCTCGCSERP 352
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 181/352 (51%), Gaps = 50/352 (14%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL+R+ SAP +LL +S+ G R S S G S SS +
Sbjct: 23 GLARYGSAPGSLLAAIAESVTRGDPAPPPPPVSRFYS--AESSGLTSCESSCR------- 73
Query: 76 VSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKL 135
+ G PP P + + + + S L R SSSPAGL ++L
Sbjct: 74 -----TDGGGGGRPP--PLERAYGGSGEIRVPPPPQQQHPLAASTLFRHSSSPAGLLSRL 126
Query: 136 SA--QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSR-IP--SSLGMLSRVSE- 189
A A+ +GSY V GS+ + ++L SQ S + +P S +GM+ + E
Sbjct: 127 MADPHGMAATGGGMGSYPQV-GSDAAMGHGHRQLSSQWSFSRQDLPQISEMGMIPDIGES 185
Query: 190 VESDGPTHGKVRNGNGDTQ-----FYSTGFSYGSWNDSS-----------------HFTE 227
+ + G G G TQ + S FS SW+D++
Sbjct: 186 IVAGGCNSSSEGGGGGATQAQSSSYLSRNFSVSSWDDTNSIMFSSPSKKPKVDPADDMVT 245
Query: 228 SFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRT 286
SF+++ + G L NS S EM+ ++ +LQ Q DSV C++RAKRGCATHPRSIAER RRT
Sbjct: 246 SFSNIDSQFG---LSNS-SLEMSGMDDYLQMQQDSVACRVRAKRGCATHPRSIAERERRT 301
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RIS+R++KLQ+LVPNMDKQTNT+DMLDLAVDYIK+L+++ + L ++A C C
Sbjct: 302 RISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDRVEKLKHDQANCCC 353
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 181/356 (50%), Gaps = 43/356 (12%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGV-NKSSF-----ESERLISRFMNSGGDNSNNSSFQE 69
GL R+ SAP + L + D + GG N F S+ I F D+S S +
Sbjct: 22 GLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFIGNFFTGAADSS---SLRS 78
Query: 70 FEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKS---------VNSN 120
V+ + Q G + SY F + S + KS + +
Sbjct: 79 DSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQQHKSNDIGGGNSSGSYS 138
Query: 121 LVRQSSSPAGLFAKLSA-QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPS 179
L RQ SSPA F L++ +N ++ + Y GSNG S RLKSQ+S +
Sbjct: 139 LARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHS--RLKSQLSFTNH--- 193
Query: 180 SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYG---SWNDSSH---FTESFTDMK 233
L+R++EV ++ P H +G+G + F + F SW+D S FT + +
Sbjct: 194 --DSLARINEV-NETPVH----DGSGHS-FSAASFGAATTDSWDDGSGSIGFTVTRPSKR 245
Query: 234 REQGNGELGNSTS----AEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRI 288
+ + L + S M ++ F+Q +DSVPCKIRAKRGCATHPRSIAER RRTRI
Sbjct: 246 SKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRI 305
Query: 289 SERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKP 344
S +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ+Q + L ++ C C +KP
Sbjct: 306 SGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEKP 361
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 187/364 (51%), Gaps = 59/364 (16%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGV-NKSSF-----ESERLISRFMNSGGDNSNNSSFQE 69
GL R+ SAP + L + D + GG N F S+ I F D+S+
Sbjct: 22 GLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFIGNFFTGAADSSS------ 75
Query: 70 FEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQS-----------------S 112
++S + S G H ++ ++++ D+FLD+S
Sbjct: 76 --LRSDSTTCGVNNSSDG---HKQLGNNNNNNSNKDIFLDRSYGGFNEISQQHKSNDIGG 130
Query: 113 RVKSVNSNLVRQSSSPAGLFAKLSA-QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
S + +L RQ SSPA F L++ +N ++ + Y GSNG S RLKSQ+
Sbjct: 131 GNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHS--RLKSQL 188
Query: 172 SIPSRIPSSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYG---SWNDSSH---F 225
S + L+R++EV ++ P H +G+G + F + F SW+D S F
Sbjct: 189 SFTNH-----DSLARINEV-NETPVH----DGSGHS-FSAASFGAATTDSWDDGSGSIGF 237
Query: 226 TESFTDMKREQGNGELGNSTS----AEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIA 280
T + + + + L + S M ++ F+Q +DSVPCKIRAKRGCATHPRSIA
Sbjct: 238 TVTRPSKRSKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIA 297
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSK 340
ER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ+Q + L ++ C C
Sbjct: 298 ERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGC 357
Query: 341 IQKP 344
+KP
Sbjct: 358 SEKP 361
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 133/236 (56%), Gaps = 26/236 (11%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSS 180
LVRQ SSPAG G+ S E + G RLKSQ+S + +S
Sbjct: 137 LVRQRSSPAGFL-------GHLSVAEPNGGFSLTMGGGGGGNGGGRLKSQMSFNGQ-DNS 188
Query: 181 LGMLSRVSE--VES-DGPTHGKVRNGNGDTQFY-STGFSY-GSWNDSSH---FTESFTDM 232
L +S +SE VE+ + ++G N N F S+ F+ SW+ SS+ F
Sbjct: 189 LSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAAPHAKR 248
Query: 233 KREQGNGELGNS---------TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAER 282
+ + + T+ EMAAVE+ LQ +DSVPCKIRAKRGCATHPRSIAER
Sbjct: 249 SKHHSDADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAER 308
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RRTRIS +++KLQELVPNMDKQT+ +DMLDLAV +IK LQNQ + L+ C C
Sbjct: 309 ERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTC 364
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 137/262 (52%), Gaps = 50/262 (19%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRI--P 178
L R SSSP G F+ L NGY + + G GG G PST S S R P
Sbjct: 83 LARHSSSPVGFFSNLVMDNGYPRSNKAGVSGG---GEGQRDPSTANNNSGSSSSGRKMKP 139
Query: 179 SSLGM-------------------LSRVSEVESDG----PTHGKVRN------------- 202
SS G LSR+SE DG P G V +
Sbjct: 140 SSSGFNFAGGTQQQGQQQGAAGGHLSRISE---DGCASFPAGGLVGDRAAGGRGSGESSS 196
Query: 203 --GNGDTQFYSTGFSY-GSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ 259
+ YS GFS G W +S + Q +G + T+ EMA +++++Q Q
Sbjct: 197 GGAAAAARSYSGGFSIVGPWEESRDIITTLGAYD-PQFSGAMAG-TALEMAGMDRYMQLQ 254
Query: 260 -DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
D VP K+RAKRGCATHPRSIAER RRTRISE++RKLQ+LVPNMDKQT+TADMLDLAV++
Sbjct: 255 QDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEH 314
Query: 319 IKDLQNQFKTLSDNRAKCKCSK 340
IK LQ++ + L + KC C +
Sbjct: 315 IKGLQSELQALKHEQEKCTCCR 336
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 178/362 (49%), Gaps = 60/362 (16%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGV-NKSSF-----ESERLISRFMNSGGDNSNNSSFQE 69
GL R+ SAP + L D + GG N F S+ I F +G D+S S +
Sbjct: 22 GLIRYGSAPGSFLNAVVDEVIGGGSSNARDFTGYQPSSDNFIGNFF-TGADSS---SLRS 77
Query: 70 FEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQS-----------------S 112
V+ + Q+ ++N+ D+FLD++
Sbjct: 78 DSTTCGVNSSDGQKQL------------GNNNNNKDIFLDRTYGGYNEISQQHKSNDIGG 125
Query: 113 RVKSVNSNLVRQSSSPAGLFAKLSA-QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQI 171
+ +L RQ SSPA F LSA +N ++ + Y GSN S RLKSQ+
Sbjct: 126 NSSGSSYSLARQRSSPADFFTYLSADKNNFSLNQPTSDYNPQGGSNAGRGHS--RLKSQL 183
Query: 172 SIPSRIPSSLGMLSRVSEVE-SDGPTHGKVRNGNGDTQFYSTGFSYGSWNDSSH---FTE 227
S + SL ++ V+E DG H + + SW+D S FT
Sbjct: 184 SFTNH--DSLARINEVNETPVHDGSDHSF-------SAASFGAAATDSWDDGSGSIGFTV 234
Query: 228 SFTDMKREQGNGELGNSTS----AEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAER 282
+ + + + + L + S A M ++ F+Q +DSVPCKIRAKRGCATHPRSIAER
Sbjct: 235 TRPNKRSKDMDSGLFSQYSLPSDASMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAER 294
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQ 342
RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ+Q + L ++ C C +
Sbjct: 295 ERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 354
Query: 343 KP 344
+P
Sbjct: 355 RP 356
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 143/263 (54%), Gaps = 55/263 (20%)
Query: 121 LVRQSSSPAGLFAKLSAQ---NGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRI 177
L R SSSPAGL ++L A NG A+T+ +G Y G + + +RL SQ S
Sbjct: 131 LFRHSSSPAGLLSRLMADPHGNGMAATRGMGGY--SGGGGDAGAMAHRRLSSQWSF---- 184
Query: 178 PSSLGMLSRVSEVESDGPTHGK--------------VRNGNGDTQFYST-GFSYGSWNDS 222
S L ++SE+ P G+ +G + F S+ FS SW+D+
Sbjct: 185 --SRQDLPQISEMGGLIPDIGESIVTGGGGNSSSNGAGHGAQSSSFLSSRNFSMSSWDDT 242
Query: 223 S-------------------------HFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQ 257
+ SF+++ + G L +S EMA ++ FLQ
Sbjct: 243 NSIMFSPPSSSKKARVAAAAAGDHGDDMVSSFSNIDSQFG---LSKQSSLEMAGMDDFLQ 299
Query: 258 FQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
Q DSV C+ RAKRGCATHPRSIAER RRTRIS+R++KLQ+LVPNMDKQTNT+DMLD+AV
Sbjct: 300 LQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAV 359
Query: 317 DYIKDLQNQFKTLSDNRAKCKCS 339
YIK+LQ Q + L ++A C CS
Sbjct: 360 TYIKELQGQVEKLKHDQANCTCS 382
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 143/263 (54%), Gaps = 55/263 (20%)
Query: 121 LVRQSSSPAGLFAKLSAQ---NGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRI 177
L R SSSPAGL ++L A NG A+T+ +G Y G + + +RL SQ S
Sbjct: 131 LFRHSSSPAGLLSRLMADPHGNGMAATRGMGGY--SGGGGDAGAMAHRRLSSQWSF---- 184
Query: 178 PSSLGMLSRVSEVESDGPTHGK--------------VRNGNGDTQFYST-GFSYGSWNDS 222
S L ++SE+ P G+ +G + F S+ FS SW+D+
Sbjct: 185 --SRQDLPQISEMGGLIPDIGESIVTGGGGNSSSDGAGHGAQSSSFLSSRNFSMSSWDDT 242
Query: 223 S-------------------------HFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQ 257
+ SF+++ + G L +S EMA ++ FLQ
Sbjct: 243 NSIMFSPPSSSKKARVAAAAAGDHGDDMVSSFSNIDSQFG---LSKQSSLEMAGMDDFLQ 299
Query: 258 FQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
Q DSV C+ RAKRGCATHPRSIAER RRTRIS+R++KLQ+LVPNMDKQTNT+DMLD+AV
Sbjct: 300 LQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAV 359
Query: 317 DYIKDLQNQFKTLSDNRAKCKCS 339
YIK+LQ Q + L ++A C CS
Sbjct: 360 TYIKELQGQVEKLKHDQANCTCS 382
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 130/227 (57%), Gaps = 26/227 (11%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSS 180
LVRQ SSPAG G+ S E + G RLKSQ+S + +S
Sbjct: 137 LVRQRSSPAGFL-------GHLSVAEPNGGFSLTMGGGGGGNGGGRLKSQMSFNGQ-DNS 188
Query: 181 LGMLSRVSE--VES-DGPTHGKVRNGNGDTQFY-STGFSY-GSWNDSSH---FTESFTDM 232
L +S +SE VE+ + ++G N N F S+ F+ SW+ SS+ F
Sbjct: 189 LSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAAPHAKR 248
Query: 233 KREQGNGELGNS---------TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAER 282
+ + + T+ EMAAVE+ LQ +DSVPCKIRAKRGCATHPRSIAER
Sbjct: 249 SKHHSDADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAER 308
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
RRTRIS +++KLQELVPNMDKQT+ +DMLDLAV +IK LQNQ + L
Sbjct: 309 ERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQVL 355
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 179/380 (47%), Gaps = 83/380 (21%)
Query: 11 QQSNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEF 70
Q + GL+R+ SAP A L DS +S ++SRF + GG+ S+ + E
Sbjct: 19 QHHHGGLARYGSAPGAFLAALADS------VVASPPPPPVVSRFFSGGGETSSGLASCES 72
Query: 71 EVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAG 130
+ G Q++ G + Q + S L+R SSSPAG
Sbjct: 73 SCHTD---GRLQRAYGG-------------SGEIIHHVPQPPPHPAPQSGLLRHSSSPAG 116
Query: 131 LFAKLSAQ-----------NGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQIS------- 172
L ++L A GY ++ G N D +RL SQ S
Sbjct: 117 LLSRLMADPHGNNGGMGNIGGYTHSQAAG--------NVDAMAQHRRLSSQWSFSRQQQD 168
Query: 173 --IP---------SRIPSSLG-MLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGSWN 220
+P + +P+ +G ++ SDG G ++ + S FS SW+
Sbjct: 169 MIMPQISEMGMALATMPADIGESIATGGNSSSDGAG-GNAQSSSYGGGGLSRNFSMSSWD 227
Query: 221 D-----------SSHFTESFTDMKREQG---------NGELG-NSTSAEMAAVEKFLQFQ 259
D SS + D+ + + G +S+S EM ++ +LQ Q
Sbjct: 228 DTNSIMFSSPARSSKKAKVMVDLDHADDGMVTSFSNIDSQFGVSSSSLEMPGMDDYLQLQ 287
Query: 260 -DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
DSV C++RAKRGCATHPRSIAER RRTRIS+R+RKLQ+LVPNMDKQTNT+DMLD+AVDY
Sbjct: 288 QDSVACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDY 347
Query: 319 IKDLQNQFKTLSDNRAKCKC 338
IK LQ+Q + L ++ C C
Sbjct: 348 IKVLQDQIEKLKQDQGNCSC 367
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 181/385 (47%), Gaps = 79/385 (20%)
Query: 15 PGLSRFNSAPTALLVNFTDSLESGGVNKSSFESER-------------LISRFMN--SGG 59
P L+R+ SAP + L DS+ GG + S ++SRF + S G
Sbjct: 16 PQLARYGSAPGSFLAALADSVSRGGGEAPASHSHSHSQQQHHHQPVAAVVSRFFSGESSG 75
Query: 60 DNSNNSSFQEFEVKSPV--SYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSV 117
S SS + + + + +YG S + + +
Sbjct: 76 LTSCESSCRTADAPAALQRAYGGSGEI---------------------HVPPPALPQQQQ 114
Query: 118 NSNLVRQSSSPAGLFAKLSAQ-----------------NGYASTKEVGSYGGVNGSNGDL 160
L+R SSSPAGL ++L A GYA + S GG G+ +
Sbjct: 115 QPGLLRHSSSPAGLLSRLMADPHGNGGGMGGARGGGMGGGYAHSHS-HSQGGAGGNADAM 173
Query: 161 SPST-KRLKSQISIPSR---IP--SSLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGF 214
+ + +RL SQ S + +P + +GM + G+G S F
Sbjct: 174 AAAQQRRLSSQWSFSRQQDMMPHIAEMGMAMPTPTPMPPADVGESIATGHGSGDL-SRSF 232
Query: 215 SYGSWNDSSH---FTESFTDMK-REQGNGELGNSTS-----------AEMAAVEKFLQFQ 259
S SW+D++ F+ K + +G+ G TS +M ++ +LQ Q
Sbjct: 233 SMSSWDDTNSNIIFSAPPGGKKAKVMADGDDGMVTSFSNIDSQFGSSLDMPGMDDYLQLQ 292
Query: 260 -DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
DSV C++RAKRGCATHPRSIAER RRTRIS+R+R+LQ+LVPNMDKQTNT+DMLD+AVDY
Sbjct: 293 QDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDY 352
Query: 319 IKDLQNQFKTLSDNRAKCKCSKIQK 343
IK LQ+Q + L ++ C CS QK
Sbjct: 353 IKVLQDQIEKLKQDQGNCSCSADQK 377
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 91/123 (73%), Gaps = 3/123 (2%)
Query: 217 GSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATH 275
G W +S + + + G + ++++ EMA ++++LQ Q D VP K+RAKRGCATH
Sbjct: 93 GPWEESRDIISTLGGYESQFGG--MASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATH 150
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAK 335
PRSIAER RRTRISE++RKLQELVPNMDKQT+TADMLDLAV++IK LQ+Q + L + K
Sbjct: 151 PRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEK 210
Query: 336 CKC 338
C C
Sbjct: 211 CTC 213
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 91/123 (73%), Gaps = 9/123 (7%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
T+ + +K EQ +G + M + F+DSVPC++RAKRGCATHPRSIAERVRR
Sbjct: 146 TQFSSQLKEEQMSGGISGMMDMNMDKI-----FEDSVPCRVRAKRGCATHPRSIAERVRR 200
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPV 345
TRIS+R+R+LQELVPNMDKQTNTADML+ AV+Y+K LQ+Q + L++ + +CKC KP
Sbjct: 201 TRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKC----KPK 256
Query: 346 ENQ 348
E Q
Sbjct: 257 EEQ 259
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 97/143 (67%), Gaps = 19/143 (13%)
Query: 210 YSTGFSYGSWNDSSHFTESFTDMKREQG-------------NGELGNSTSAEMAAVEKFL 256
+++GFS GSW DS+ F+++ + G + EL + EMA + L
Sbjct: 78 FTSGFSIGSWEDSNSI--EFSNLANKTGIHNNDDIIDNISNSYELQFGVAKEMAGL---L 132
Query: 257 QFQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
Q Q D VP ++RAKRGCATHPRSIAER RRTRISE++RKLQ LVPNMDKQT+TADMLDLA
Sbjct: 133 QMQQDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLA 192
Query: 316 VDYIKDLQNQFKTLSDNRAKCKC 338
VD+I+ LQN+ + L ++ KC C
Sbjct: 193 VDHIRGLQNELQALKKDKEKCSC 215
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 239 GELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 298
G L S+ EM ++K L+ +SVPCKIRAKRGCATHPRSIAERVRRTRIS+R+RKLQEL
Sbjct: 164 GSLRASSLIEME-MDKLLE--ESVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 220
Query: 299 VPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
VPNMDKQTNTADML+ AVDY+K LQ Q + L++ + KCKC
Sbjct: 221 VPNMDKQTNTADMLEEAVDYVKFLQRQIQELTEQQRKCKC 260
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 106/151 (70%), Gaps = 12/151 (7%)
Query: 195 PTHGKVRNGNGDTQFYSTGFSYGSWNDSSHFTESF----TDMK-REQG--NGELGNSTSA 247
PT +G G Q Y + SYG+ ++ + T + +D + RE+G G L S+
Sbjct: 97 PTDFLRSSGIGSDQGYFS--SYGNASNYEYMTPNMDVSPSDKRAREKGEQTGPLRASSLI 154
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTN 307
EM ++K L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQELVPNMDKQTN
Sbjct: 155 EME-MDKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTN 211
Query: 308 TADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
TADMLD A+ Y+K LQ Q + L++ + KCKC
Sbjct: 212 TADMLDEALAYVKFLQRQIQELTEQQRKCKC 242
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
Query: 225 FTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERV 283
SF+++ + G L +S EMA ++ FLQ Q DSV C+ RAKRGCATHPRSIAER
Sbjct: 117 MVSSFSNIDSQFG---LSKQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERE 173
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
RRTRIS+R++KLQ+LVPNMDKQTNT+DMLD+AV YIK+LQ Q + L ++A C CS
Sbjct: 174 RRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQANCTCS 229
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
Query: 225 FTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERV 283
SF+++ + G L +S EMA ++ FLQ Q DSV C+ RAKRGCATHPRSIAER
Sbjct: 54 MVSSFSNIDSQFG---LSKQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERE 110
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
RRTRIS+R++KLQ+LVPNMDKQTNT+DMLD+AV YIK+LQ Q + L ++A C CS
Sbjct: 111 RRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQANCTCS 166
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 6/119 (5%)
Query: 221 DSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
DS+ S +K EQG G + AEM + +DSV C++RAKRGCATHPRSIA
Sbjct: 144 DSNAAKASLAVVKGEQGGG-ISGLLDAEMDKLA-----EDSVLCRVRAKRGCATHPRSIA 197
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCS 339
ERVRRTRIS+R+RKLQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L++ + KCKCS
Sbjct: 198 ERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEQQKKCKCS 256
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 100/148 (67%), Gaps = 18/148 (12%)
Query: 209 FYSTGFSYGSWNDSSHFTESFTDMKREQGNGELG-----------------NSTSAEMAA 251
+ S FS GSW+D++ S K+ + + G +++S E+
Sbjct: 77 YLSRTFSVGSWDDTNSIMFSSAPCKKPKVDPAAGADDMVTNFSTIDPQFGLSNSSLELPG 136
Query: 252 VEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
++ +LQ Q DSV C++RA+RGCATHPRSIAER RRTRIS+R++KLQ+LVPNMDKQTNT+D
Sbjct: 137 MDDYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSD 196
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
MLDLAV+YIK+L++Q + L ++A C C
Sbjct: 197 MLDLAVEYIKELKDQVEKLKHDQANCCC 224
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 92/118 (77%), Gaps = 6/118 (5%)
Query: 221 DSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIA 280
D+ +F F+ + +G+G + + EM EK L+ DSVPC++RAKRGCATHPRSIA
Sbjct: 129 DAQNFFPKFSPQLKREGSG-VSSLIDMEM---EKLLE--DSVPCRVRAKRGCATHPRSIA 182
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
ERVRRTRIS+R+RKLQE+VPNMDKQTNTADML+ AV+Y+K LQ Q + L++++ +CKC
Sbjct: 183 ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 122/208 (58%), Gaps = 26/208 (12%)
Query: 151 GGVNG-SNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSE----------VESDGPTHGK 199
GVNG ++ +S K++KS +++ S G LS+ SE V G +
Sbjct: 17 AGVNGEAHHAMSGYQKKMKSPMNL-----SRQGALSQFSEDGIPNDLTNNVHGIGHSEEN 71
Query: 200 VRNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGE-----LGNSTSAEMAAVEK 254
+ N + +STGFS GSW D + S K N + + NS + ++
Sbjct: 72 I-TANNVARSFSTGFSIGSWEDPNSIVFSNPTSKAGIHNNDDIIASISNSYELQFGVAKE 130
Query: 255 ---FLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
LQ Q D VP ++RAKRGCATHPRSIAER RRTRISE++RKLQ LVPNMDKQT+TAD
Sbjct: 131 TAGLLQMQQDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTAD 190
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
MLDLAVD+I+ LQ++ + L +++ KC C
Sbjct: 191 MLDLAVDHIRGLQSELQALKEDKEKCTC 218
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 146/325 (44%), Gaps = 66/325 (20%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL+R+ SAP +LL + DSL G F E S+ S +E
Sbjct: 20 GLTRYGSAPGSLLTSTVDSLIGGSRPSPYFSGE-------------SSESPCKE------ 60
Query: 76 VSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFAKL 135
Q+S PP S S+L+RQ SSPAG + L
Sbjct: 61 ------QRSFHNHPP-------------------------SFASSLLRQKSSPAGFLSHL 89
Query: 136 SAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVESDGP 195
S +G T G N ++ + LKSQ+S LS V+
Sbjct: 90 SNHHGVGFTITPGGLSNSNSNS-----NCSLLKSQLSFTHE------SLSNTVNVDPSST 138
Query: 196 THGKVRNGNGDTQFYSTGFSYGSWN-DSSHFTESFTDMKREQGNGELGNSTSAEMAAVEK 254
T G N F +T N + S Q N TS EM+ V+K
Sbjct: 139 TFGMDPWDNNSIAFSATSTKRSKTNTNDPDILHSLNSALESQFNLP---HTSLEMSTVDK 195
Query: 255 FLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
L +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ ADMLD
Sbjct: 196 LLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLD 255
Query: 314 LAVDYIKDLQNQFKTLSDNRAKCKC 338
LAV +IK LQ Q + L C C
Sbjct: 256 LAVQHIKGLQTQVQKLHKEMENCTC 280
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 87/119 (73%), Gaps = 9/119 (7%)
Query: 220 NDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
+DS+ F +K EQG G + + ++ +DSVPC++RAKRGCATHPRSI
Sbjct: 47 DDSAKFGHQ---LKEEQGTG------AGSLLDLDLERMLEDSVPCRVRAKRGCATHPRSI 97
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
AERVRRTRIS+R+RKLQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L +++ KC C
Sbjct: 98 AERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEELMEHQRKCTC 156
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 74/85 (87%)
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
+ +DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQELVPNMDKQTNTADMLD
Sbjct: 69 EIFMLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLD 128
Query: 314 LAVDYIKDLQNQFKTLSDNRAKCKC 338
AV Y+K LQ Q + LS+++ +CKC
Sbjct: 129 EAVAYVKFLQKQIEELSEHQRRCKC 153
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 294
EQ + G+ S +EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RK
Sbjct: 146 EQSSRLTGSVASLLDVDMEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 203
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
LQELVPNMDKQTNTADML+ AV+Y+K LQ + + LS+++ KC C
Sbjct: 204 LQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTC 247
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 294
EQ + G+ S +EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RK
Sbjct: 76 EQSSRLTGSVASLLDVDMEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 133
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
LQELVPNMDKQTNTADML+ AV+Y+K LQ + + LS+++ KC C
Sbjct: 134 LQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTC 177
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 9/123 (7%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
T+ + +K EQ +G + M + + SVPC++RAKRGCATHPRSIAERVRR
Sbjct: 143 TQFSSQLKEEQMSGGVSGMMDMNMDKL-----IEGSVPCRVRAKRGCATHPRSIAERVRR 197
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPV 345
TRIS+R+R+LQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L++ + +CKC KP
Sbjct: 198 TRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQELTEQQKRCKC----KPK 253
Query: 346 ENQ 348
E Q
Sbjct: 254 EEQ 256
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 73/82 (89%)
Query: 258 FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
+DSVPCKIRAKRG ATHPRSIAERVRRTRIS+R+RKLQELVPNMDKQTNTA+MLD AV
Sbjct: 110 LEDSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVA 169
Query: 318 YIKDLQNQFKTLSDNRAKCKCS 339
Y+K LQNQ + LS+ + +CKC+
Sbjct: 170 YVKFLQNQIEELSEQQRRCKCT 191
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 118/213 (55%), Gaps = 25/213 (11%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGY-----ASTKEVGSYGGVNGSNGDLSPSTKRLKSQISI 173
S+L+RQSSSPAG NGY AS GG + S + RL Q+S
Sbjct: 131 SSLIRQSSSPAGFLDHFGMDNGYGAMLRASMGMGFQDGGASDSLAGGGGGSGRLGGQLSF 190
Query: 174 PSRIPSSLGMLSRVSEVESDGPTHGKVR--NGNGDTQFYSTGFSYGSWNDSSHFTESFTD 231
SR S ++S++SE++S G G G Y G+ S + D
Sbjct: 191 SSRQGS---LMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWDDSSSALLPD 247
Query: 232 M-----KR-----EQGNG-----ELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHP 276
KR E G G L ++S+E+AA+EKFLQFQD+VPCK+RAKRGCATHP
Sbjct: 248 SLPATNKRPRDSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQFQDAVPCKVRAKRGCATHP 307
Query: 277 RSIAERVRRTRISERMRKLQELVPNMDKQTNTA 309
RSIAERVRRT+ISER+RKLQELVP+MDK T A
Sbjct: 308 RSIAERVRRTKISERIRKLQELVPDMDKVTAPA 340
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 134/242 (55%), Gaps = 34/242 (14%)
Query: 121 LVRQSSSPAGLFAKL--SAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
L R SSPAG + + + NG++ +G G G G+ PS RLKS++ S
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGFS----LGRPNGGYGGGGEQGPS--RLKSELRFSSGSS 135
Query: 179 S--SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-----W-NDSSHFTESFT 230
S L R+SEVE+ RNG S+ S+G+ W N SSH + +
Sbjct: 136 SHQEHNSLPRISEVEAAA----AARNG-----VASSSMSFGNNRTNNWDNSSSHISFTID 186
Query: 231 DMKREQGNGELGN--------STSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAE 281
+ N + T+ EMA +E + +DSVPC+ RAKRG ATHPRSIAE
Sbjct: 187 QPGKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAE 246
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKI 341
R RRTRIS +++KLQELVPNMDKQT+ ADMLDLAV++IK LQ+Q ++L +C C
Sbjct: 247 RERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTCGAC 306
Query: 342 QK 343
+K
Sbjct: 307 KK 308
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 134 bits (337), Expect = 6e-29, Method: Composition-based stats.
Identities = 65/99 (65%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Query: 241 LGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELV 299
+ ++++ EMA ++++LQ Q D VP K+RAKRGCATHPRSIAER RRTRISE++RKLQELV
Sbjct: 1 MASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQELV 60
Query: 300 PNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
PNMDKQT+TADMLDLAV++IK LQ+Q + L + KC C
Sbjct: 61 PNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTC 99
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 222 SSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAE 281
S FT + MK EQ +G++ S+ M+ + +DSV ++RAKRGCATHPRSIAE
Sbjct: 144 SPEFT---SQMKGEQSSGQVPTGVSS-MSDMNMENLMEDSVAFRVRAKRGCATHPRSIAE 199
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RVRRTRIS+R+RKLQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L++ + +C C
Sbjct: 200 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTC 256
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 76/99 (76%), Gaps = 8/99 (8%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
+S + A E LQ DSVPC++RAKRGCATHPRSIAERVRRTRISERMR+LQELVPNMDK
Sbjct: 397 SSGGLLAAENLLQ--DSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDK 454
Query: 305 ------QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCK 337
QTNT+DMLD AV+Y+K LQ Q L + R KC+
Sbjct: 455 SLAVIQQTNTSDMLDEAVEYMKFLQKQVDDLQECREKCQ 493
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
Query: 222 SSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAE 281
S FT + MK EQ +G++ S M + +DSV ++RAKRGCATHPRSIAE
Sbjct: 146 SPEFT---SQMKGEQSSGQVPAGVSG-MTDMNMENLMEDSVAFRVRAKRGCATHPRSIAE 201
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RVRRTRIS+R+RKLQELVPNMDKQTNTADML+ AV+Y+K LQ Q + L++ + +C C
Sbjct: 202 RVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTC 258
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 124/238 (52%), Gaps = 28/238 (11%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSS 180
L R SSSPAG F+ L +G S G + S ++KSQ+ + P S
Sbjct: 84 LARHSSSPAGFFSNLMVDDG--------SRAGAAAGGAEAHRSGTKMKSQLGFTAGGPHS 135
Query: 181 LGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFS-----------------YGSWNDSS 223
LSR+SE + P + + G G W++S
Sbjct: 136 ASHLSRISEGAALFPGAAAAGHSHSGGSGGEHGAVSRSFSAGGGGGAGGFSIVGPWDESR 195
Query: 224 HFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDS---VPCKIRAKRGCATHPRSIA 280
+ E + + +S E+A ++K++Q Q V K+RAKRGCATHPRSIA
Sbjct: 196 DIIGTLDIGGYESQFSGMASPSSLELAGMDKYMQAQQQQDQVAFKVRAKRGCATHPRSIA 255
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
ER RRTRISE++RKLQ+LVPNMDKQT+T+DMLDLAV++IK LQ+Q + + + KC C
Sbjct: 256 ERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQLQAMKHEQDKCTC 313
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
+S + A E LQ DSVPC++RAKRGCATHPRSIAERVRRTRISERMR+LQELVPNMDK
Sbjct: 6 SSGGLLAAENLLQ--DSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDK 63
Query: 305 QTNTADMLDLAVDYIKDLQNQF 326
QTNT+DMLD AV+Y+K LQ Q
Sbjct: 64 QTNTSDMLDEAVEYMKFLQKQV 85
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
TS EM + + QDSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDK
Sbjct: 245 TSLEMDQLMHNIP-QDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDK 303
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
QT+ +DMLDLAV +IK LQ Q + L ++ C C
Sbjct: 304 QTSYSDMLDLAVQHIKGLQTQVQKLHEDLENCTC 337
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 10/140 (7%)
Query: 209 FYSTGFSYGSWNDSSHFTESFTDMKREQ-GNGEL-----GNSTSA---EMAAVEKFLQF- 258
+ + GF SW++ + S K+ + G+G++ G T E+ VEK L
Sbjct: 10 YSAAGFGMESWDNPNSIVFSGPPSKQARNGDGDIYSCFNGLETQVLNLEIETVEKLLHVP 69
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
+DSVPCKIRAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ ADMLD AV +
Sbjct: 70 EDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQH 129
Query: 319 IKDLQNQFKTLSDNRAKCKC 338
IK LQN+ + L C C
Sbjct: 130 IKGLQNEVEKLHKEMENCTC 149
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 124/225 (55%), Gaps = 28/225 (12%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPS- 179
L R SSPAG + + + + +G G G G+ PS RLKS++ S S
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGTGFSLGRPNGGYGGGGEQGPS--RLKSELRFSSGSSSH 139
Query: 180 -SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-----W-NDSSHFTESFTDM 232
L R+SEVE+ RNG S+ S+G+ W N SSH + +
Sbjct: 140 QEHNSLPRISEVEAAA----AARNG-----VASSSMSFGNNRTNNWDNSSSHISFTIDQP 190
Query: 233 KREQGNGELGN--------STSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERV 283
+ N + T+ EMA +E + +DSVPC+ RAKRG ATHPRSIAER
Sbjct: 191 GKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERE 250
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
RRTRIS +++KLQELVPNMDKQT+ ADMLDLAV++IK LQ+Q +
Sbjct: 251 RRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 295
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 127/227 (55%), Gaps = 34/227 (14%)
Query: 121 LVRQSSSPAGLFAKL--SAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIP 178
L R SSPAG + + + NG++ +G G G G+ PS RLKS++ S
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGFS----LGRPNGGYGGGGEQGPS--RLKSELRFSSGSS 135
Query: 179 S--SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYGS-----W-NDSSHFTESFT 230
S L R+SEVE+ RNG S+ S+G+ W N SSH + +
Sbjct: 136 SHQEHNSLPRISEVEAAA----AARNG-----VASSSMSFGNNRTNNWDNSSSHISFTID 186
Query: 231 DMKREQGNGELGN--------STSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAE 281
+ N + T+ EMA +E + +DSVPC+ RAKRG ATHPRSIAE
Sbjct: 187 QPGKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAE 246
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
R RRTRIS +++KLQELVPNMDKQT+ ADMLDLAV++IK LQ+Q +
Sbjct: 247 RERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 293
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
+VP + RAKRGCATHPRSIAERVRRT+ISERM+KLQ+LVP+MDKQTNT+DMLD V+Y+K
Sbjct: 378 TVPMRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVK 437
Query: 321 DLQNQFKTLSDNRAKCKCSKIQK 343
LQ Q + LSD + + + QK
Sbjct: 438 SLQRQVQELSDTVVRLEAAAAQK 460
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Query: 245 TSAEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 303
TS EMA +E + +DSVPCK RAKRG ATHPRSIAER RRTRIS +++KLQELVPNMD
Sbjct: 211 TSLEMARMENLMNIPEDSVPCKARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMD 270
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKT 328
KQT+ ADMLDLAV++IK LQ+Q +
Sbjct: 271 KQTSYADMLDLAVEHIKGLQHQVEV 295
>gi|414879182|tpg|DAA56313.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 323
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 149/321 (46%), Gaps = 52/321 (16%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMNSGGDNSNNSSFQEFEVKSP 75
GL+R+ SAP +LL DS+ G R S S G S +SS + + P
Sbjct: 21 GLARYGSAPGSLLAAIADSVTRGDPAPPPPPVSRFYS--AESSGLTSCDSSCRTDCGRPP 78
Query: 76 V--SYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNSNLVRQSSSPAGLFA 133
+ +YG S + R + + L S L R SSSPAGL +
Sbjct: 79 LERAYGGSGEI---------RVPPPLQQQQHHLL------APPAASPLFRHSSSPAGLLS 123
Query: 134 KL--SAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSEVE 191
+L AS +GSY GS+ L P +Q+S S+ S L ++SE+
Sbjct: 124 RLMTDPHGMAASGGAMGSYTQA-GSDAALGPGHGHGHAQLS--SQWSFSRQDLPQISEMG 180
Query: 192 SDGPTHGKVRNGNGDT----------QFYSTGFSYGSWNDSSHFTESFTDMKREQGNGEL 241
G+ G G + S FS GSW+D++ S K+ + +
Sbjct: 181 MIPADIGESIVGAGGCNSSSDAAQSSSYLSRTFSVGSWDDTNSIMFSSAPCKKPKVDPAA 240
Query: 242 G-----------------NSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATHPRSIAERV 283
G +++S E+ ++ +LQ Q DSV C++RA+RGCATHPRSIAER
Sbjct: 241 GADDMVTNFSTIDPQFGLSNSSLELPGMDDYLQLQQDSVACRVRARRGCATHPRSIAERE 300
Query: 284 RRTRISERMRKLQELVPNMDK 304
RRTRIS+R++KLQ+LVPNMDK
Sbjct: 301 RRTRISKRLKKLQDLVPNMDK 321
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
Query: 237 GNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQ 296
G G+ G S+ EM +EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ
Sbjct: 167 GGGD-GMSSLIEME-MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 222
Query: 297 ELVPNMDKQTNTADMLDLAVDYIKDLQ-NQFKTLSDNRAKCKC 338
ELVPNMDKQTNTADMLD AV ++++ N +NR + C
Sbjct: 223 ELVPNMDKQTNTADMLDEAVGNSRNIKGNAHAWPKNNRKEHLC 265
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 69/81 (85%)
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
+ QDSVPCK+RA+RGCATHPRS+AERVRRT+ISE +++L +LVPNMDKQTNTADML+ A+
Sbjct: 548 ELQDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAM 607
Query: 317 DYIKDLQNQFKTLSDNRAKCK 337
+Y+K L+ + + + + +CK
Sbjct: 608 EYMKQLKEKIEQMKEELRRCK 628
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
+VP + RAKRGCATHPRSIAERVRRT+ISERM++LQ+LVPNMDKQTNT+DMLD V+Y+K
Sbjct: 27 AVPMRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVK 86
Query: 321 DLQNQFKTLSDNRAKCKCSKIQK 343
LQ + + LSD A+ K Q+
Sbjct: 87 SLQRKVQELSDTVARLKADASQR 109
>gi|414886018|tpg|DAA62032.1| TPA: putative HLH DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 374
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 165/352 (46%), Gaps = 64/352 (18%)
Query: 10 HQQSNPGLSRFNSAPTALLVNFT-----DSLESGGVNKSSFE---SERLISRFMNSGGDN 61
Q +PGL R+ SAP+ LL D +GG + ++ +++RF+ G +
Sbjct: 26 QQMGSPGLLRYRSAPSTLLGEVMCGGDQDFPAAGGAGHGPPDHAAADNVLARFL--AGHH 83
Query: 62 SNN--------SSFQEFEVKSPV-SYGNSQQSCSGLPPHYPRQSSAMD---HNSYDLFLD 109
S ++ F ++ V S SQQ +Q +AM+ N +
Sbjct: 84 SETRDCKPPRPAAAAHFMDEAAVASMAASQQQQLMYQSQQEQQMAAMEGLYRNVSSGGTE 143
Query: 110 QSSRVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGV--NGSNGDLSPSTKRL 167
+ V + N++L+RQSSSPAG L+ NGY S VG GG NG S RL
Sbjct: 144 HGAAVGAGNNSLIRQSSSPAGFLNHLNMDNGYGSMLRVGMGGGGFRNGV------SDARL 197
Query: 168 KSQISIPSRIPSSLGMLSRVSEVESDG------------PTHGKVRNGNGDTQFYSTGFS 215
K Q+S SR S + +S V E DG G R +G + G +
Sbjct: 198 KGQLSFSSRQGSVMSQISEVGSEELDGGGGSGSPEAAGSNASGAARGYSGIPGYPMGGLA 257
Query: 216 YGSWNDSSHFTESFTDMKREQGNGEL------------------GNSTSAEMAAVEKFLQ 257
G+W D + + + + KR + +G G + SAEMAA+EKFLQ
Sbjct: 258 SGAWPDEASPSPT-SGAKRPRDSGPALQQPLAPQLSLPSGKNKGGRAASAEMAAIEKFLQ 316
Query: 258 FQDSVPCKIRAKRGCATHPRSIAERVR--RTRISERMRKLQELVPNMDKQTN 307
FQD+VPCKIRAKRGCATHPRSIAERVR R R+ +L L+P+ ++ N
Sbjct: 317 FQDAVPCKIRAKRGCATHPRSIAERVRCIPARCYSRIPRLV-LIPSPIQKEN 367
>gi|6850309|gb|AAF29386.1|AC009999_6 Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269. EST gb|AI996380 comes from this
gene [Arabidopsis thaliana]
Length = 323
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 155/316 (49%), Gaps = 43/316 (13%)
Query: 16 GLSRFNSAPTALLVNFTDSLESGGV-NKSSF-----ESERLISRFMNSGGDNSNNSSFQE 69
GL R+ SAP + L + D + GG N F S+ I F D+S S +
Sbjct: 22 GLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFIGNFFTGAADSS---SLRS 78
Query: 70 FEVKSPVSYGNSQQSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKS---------VNSN 120
V+ + Q G + SY F + S + KS + +
Sbjct: 79 DSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQQHKSNDIGGGNSSGSYS 138
Query: 121 LVRQSSSPAGLFAKLSA-QNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPS 179
L RQ SSPA F L++ +N ++ + Y GSNG S RLKSQ+S +
Sbjct: 139 LARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHS--RLKSQLSF-----T 191
Query: 180 SLGMLSRVSEVESDGPTHGKVRNGNGDTQFYSTGFSYG---SWNDSSH---FTESFTDMK 233
+ L+R++EV ++ P H +G+G + F + F SW+D S FT + +
Sbjct: 192 NHDSLARINEV-NETPVH----DGSGHS-FSAASFGAATTDSWDDGSGSIGFTVTRPSKR 245
Query: 234 REQGNGELGNSTS----AEMAAVEKFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRI 288
+ + L + S M ++ F+Q +DSVPCKIRAKRGCATHPRSIAER RRTRI
Sbjct: 246 SKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRI 305
Query: 289 SERMRKLQELVPNMDK 304
S +++KLQ+LVPNMDK
Sbjct: 306 SGKLKKLQDLVPNMDK 321
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 66/75 (88%)
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAV 316
+ QDSVPCK+RA+RGCATHPRS+AERVRRT+ISE +++L +LVPNMDKQTNTADML+ A+
Sbjct: 35 ELQDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAM 94
Query: 317 DYIKDLQNQFKTLSD 331
+Y+K L+ + + + +
Sbjct: 95 EYMKQLKEKIEQMKE 109
>gi|413937661|gb|AFW72212.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 113/215 (52%), Gaps = 38/215 (17%)
Query: 121 LVRQSSSPAGLFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKS-----QISIPS 175
L R SSSP G F+ L NGY + + G GGV G D PST S ++ P
Sbjct: 80 LARHSSSPVGFFSNLVVDNGYPRSNKAGGGGGVEGQQHD--PSTAANASGSSARKMKTPE 137
Query: 176 ----------RIPSSLGMLSRVSEVESDGPTHGKV---RNGNGDTQFYST---------- 212
++ ++ G LSR+SE DG G + R G G S
Sbjct: 138 FNFTGAQQGQQLGAAAGHLSRISE---DGAFPGGMMGDRAGRGSAGESSGAAAAARSYSA 194
Query: 213 -GFSY-GSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAK 269
GFS G W +S + Q +G + T+ EMA +++++Q Q D VP K+RAK
Sbjct: 195 GGFSIVGPWEESRDIITTLGAYD-PQFSGAMAG-TALEMAGMDRYVQLQQDQVPFKVRAK 252
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
RGCATHPRSIAER RRTRISE++RKLQ+LVPNMDK
Sbjct: 253 RGCATHPRSIAERERRTRISEKLRKLQDLVPNMDK 287
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
PCK RA+RG ATHPRSIAER RR+RISERM+KLQ+LVPNMDKQTNTADMLD AV+Y+K L
Sbjct: 12 PCKTRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHL 71
Query: 323 QNQFKTLSDNRAKCKCS 339
Q Q K LS+ + K S
Sbjct: 72 QTQVKDLSETIVRLKNS 88
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 261 SVPCK-IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYI 319
+VP K IRA RG ATHPRSIAERVRR +ISERM+KLQ+LVP+MD+QTNTADMLD AV+Y+
Sbjct: 57 AVPLKTIRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYV 116
Query: 320 KDLQNQFKTLSDNRAKCK 337
K LQ Q + LS A+ +
Sbjct: 117 KQLQQQVQELSKTVAELQ 134
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA RG ATHPRSIAERVRR +ISERM+KLQELVPN D+QTNTADMLD AV+Y+K LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 326 FKTLSDNRAKCK 337
+ L++ A+ +
Sbjct: 439 VQELTNTVAELQ 450
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 104 bits (259), Expect = 8e-20, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 64/80 (80%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RAKRGCATHPRSIAERVRRTRISERM+KLQ+LVPNM+K TNT+DMLD V+Y+K LQ
Sbjct: 2 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQM 61
Query: 325 QFKTLSDNRAKCKCSKIQKP 344
+ K L++ A+ K + P
Sbjct: 62 KVKELTETIAQLKAATQMSP 81
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 101 bits (252), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/73 (69%), Positives = 59/73 (80%)
Query: 262 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
V + RAKRGCATHPRSIAERVRRTRISERM+KLQ+LVPNM+K TNTADMLD V+Y+K
Sbjct: 1 VQMRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKS 60
Query: 322 LQNQFKTLSDNRA 334
LQ + L + A
Sbjct: 61 LQVKVSELQETIA 73
>gi|339716190|gb|AEJ88334.1| putative MYC protein [Tamarix hispida]
Length = 269
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 220 NDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
+DS+ F +K EQG E ++ + + +E +DSVPC++RAKRGCATHPRSI
Sbjct: 183 DDSAKFGH---QLKEEQG--EHISAGAGSLFDLEMDKMLEDSVPCRVRAKRGCATHPRSI 237
Query: 280 AERVRRTRISERMRKLQELVPNMDK 304
AERVRRTRIS+R+RKLQELVPNMDK
Sbjct: 238 AERVRRTRISDRIRKLQELVPNMDK 262
>gi|414589821|tpg|DAA40392.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 202
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 78/151 (51%), Gaps = 29/151 (19%)
Query: 163 STKRLKSQISIPSRIPSSLGMLSRVSEVESDGPTHGKVR----NGNGDTQFYST------ 212
S RLK Q+S PSR S + +S V E DG G N +G + Y
Sbjct: 28 SDARLKGQLSFPSRQGSVMSQISEVGSEELDGGGGGSPEAAGSNASGAPRGYVGIPGYPM 87
Query: 213 -GFSYGSWNDSSHFTESFTDMKREQGNGEL------------------GNSTSAEMAAVE 253
G + G+W+D + + +R + +G G SAEMAA+E
Sbjct: 88 GGGTSGAWSDEPSPSPTSGAKRRPRDSGPAPQNVQQQPLAPQLSLPSGGKPASAEMAAIE 147
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVR 284
KFLQFQD+VPCKIRAKRGCATHPRSIAERVR
Sbjct: 148 KFLQFQDAVPCKIRAKRGCATHPRSIAERVR 178
>gi|147795431|emb|CAN77105.1| hypothetical protein VITISV_037095 [Vitis vinifera]
Length = 238
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 294
EQ + G+ S +EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RK
Sbjct: 146 EQSSRLTGSVASLLDVDMEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 203
Query: 295 LQELVPNMDKQTNTADMLDLAVDYIKDL 322
LQELVPNMDK + +L I+ L
Sbjct: 204 LQELVPNMDKTPRWLNGFNLYSVAIRIL 231
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 15/143 (10%)
Query: 201 RNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGN----------GELGNSTSAEMA 250
+ G+G Q GF+ G+ + S + + QG + N T A +
Sbjct: 189 QGGDGSVQALYNGFAPGALHGSGQASNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGS 248
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
A Q + ++RA+RG ATHP SIAER+RR RI+ERM+ LQELVPN +K T+ A
Sbjct: 249 AGGAPAQPRQ----RVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKAS 303
Query: 311 MLDLAVDYIKDLQNQFKTLSDNR 333
MLD +DY+K LQ Q K LS +R
Sbjct: 304 MLDEIIDYVKFLQLQVKVLSMSR 326
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
KIRA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKVLSMSR 204
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
KIRA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKVLSMSR 204
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 198 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 256
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 257 QVKVLSMSR 265
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 195 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 253
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 254 QVKVLSMSR 262
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 137 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKVLSMSR 204
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 203 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 262 QVKVLSMSR 270
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD VDY+K LQ
Sbjct: 239 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 297
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 298 QVKVLSMSR 306
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD VDY+K LQ
Sbjct: 238 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 296
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 297 QVKVLSMSR 305
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 181 TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQ 239
Query: 324 NQFKTLSDNR 333
Q K LS +R
Sbjct: 240 LQVKVLSMSR 249
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
KIRA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY++ LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVEFLQL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKVLSMSR 204
>gi|357440299|ref|XP_003590427.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355479475|gb|AES60678.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 373
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 246 SAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
S+EM VE LQF DSV IRAKRG A HPRS+A+RVRRTRI+ERMRKLQE+V N+DK
Sbjct: 173 SSEMFVVENLLQFPDSVTSSIRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDK 231
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 188 QVKVLSMSR 196
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 103 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 161
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 162 QVKVLSMSR 170
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 36 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 94
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 95 QVKVLSMSR 103
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 246 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 304
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 305 QVKVLSMSR 313
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 252 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 310
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 311 QVKVLSMSR 319
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 188 QVKVLSMSR 196
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 275 QVKVLSVSR 283
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 186 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 244
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 245 QVKVLSMSR 253
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 262 QVKVLSMSR 270
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 262 QVKVLSMSR 270
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 90 QVKVLSMSR 98
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 127 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 185
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 186 QVKVLSMSR 194
>gi|357498241|ref|XP_003619409.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355494424|gb|AES75627.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 129
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 246 SAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
S+EM VE LQF DSV IRAKRG A HPRS+A+RVRRTRI+ERMRKLQE+V N+DK
Sbjct: 34 SSEMFVVENLLQFPDSVTSSIRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDK 92
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 255 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 313
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 314 QVKVLSMSR 322
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 89 QVKVLSMSR 97
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 224 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 282
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 283 QVKVLSMSR 291
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 173 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 231
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 232 QVKVLSMSR 240
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN +K TN A MLD +DY+K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 325 QFKTLSDNRAKCKCSKIQKPVENQ 348
Q K LS +R + + E Q
Sbjct: 372 QVKVLSMSRLGAAEAVVPLLTETQ 395
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 196 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 254
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 255 QVKVLSMSR 263
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN +K TN A MLD +DY+K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 325 QFKTLSDNRAKCKCSKIQKPVENQ 348
Q K LS +R + + E Q
Sbjct: 372 QVKVLSMSRLGAAEAVVPLLTETQ 395
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 123 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 181
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 182 QVKVLSMSR 190
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 135 RVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 193
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 194 QVKVLSMSR 202
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RAKRG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 327 KTLSDNR 333
K LS +R
Sbjct: 248 KVLSMSR 254
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 115 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 173
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 174 QVKVLSMSR 182
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RAKRG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 327 KTLSDNR 333
K LS +R
Sbjct: 255 KVLSMSR 261
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 114 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 172
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 173 QVKVLSMSR 181
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 191 QVKVLSISR 199
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 121 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILDYVKFLRL 179
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 180 QVKVLSMSR 188
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 191 QVKVLSMSR 199
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 191 QVKVLSMSR 199
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 23 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 81
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 82 QVKVLSMSR 90
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD +DY+K LQ
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQV 201
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 202 QVKVLSMSR 210
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RAKRG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY++ LQ Q
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 327 KTLSDNR 333
K LS +R
Sbjct: 254 KVLSMSR 260
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD ++Y++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 157 QVKVLSMSR 165
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD ++Y++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 157 QVKVLSMSR 165
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQ+LVPN +K T+ A MLD +DY+K L+
Sbjct: 180 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 238
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 239 QVKVLSMSR 247
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK--QTNTADMLDLAVDYIKDL 322
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K QT+ A MLD +DY+K L
Sbjct: 237 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFL 296
Query: 323 QNQFKT 328
Q Q K
Sbjct: 297 QLQVKA 302
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQ+LVPN +K T+ A MLD VDY+K LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 62 QVKVLSMSR 70
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 354 QVKVLSMSR 362
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K+RA+RG AT P SIAER+RR RI+ERMR LQ+LVPN +K T+ A MLD +DY+K L+
Sbjct: 131 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 189
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 190 QVKVLSMSR 198
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 226
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 227 QVKVLSMSR 235
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 256 LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
+Q + ++RA+RG AT P SIAER+RR RI+ERMR LQELVP+++K ++ A MLD
Sbjct: 170 MQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEI 228
Query: 316 VDYIKDLQNQFKTLSDNR 333
VDY+K L+ Q K LS +R
Sbjct: 229 VDYVKFLRLQVKVLSMSR 246
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 165 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 223
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 224 QVKVLSMSR 232
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK--QTNTADMLDLAVDYIKDL 322
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K QT+ A MLD +DY+K L
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 323 QNQFKT 328
Q Q K
Sbjct: 309 QLQVKA 314
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 207 QVKVLSMSR 215
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD + Y+K LQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 88 QVKVLSMSR 96
>gi|115447169|ref|NP_001047364.1| Os02g0603600 [Oryza sativa Japonica Group]
gi|113536895|dbj|BAF09278.1| Os02g0603600, partial [Oryza sativa Japonica Group]
Length = 60
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
RRTRISE++RKLQELVPNMDKQT+TADMLDLAV++IK LQ+Q + L + KC C
Sbjct: 2 RRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTC 56
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 226
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 227 QVKVLSMSR 235
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA+RG AT P SIAER+RR RI+ERMR LQELVPN +K T+ A MLD +DY+K L+
Sbjct: 125 KQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 183
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 184 QVKVLSMSR 192
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 150 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 208
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 209 QVKVLSMSR 217
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 156
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 157 QVKVLSMSR 165
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN ++ T+ A MLD ++Y+K LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 356 QVKVLSMSR 364
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP DK+T A MLD ++Y++ LQ Q
Sbjct: 231 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQ 290
Query: 326 FKTLS 330
+ LS
Sbjct: 291 VEFLS 295
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 262 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
V ++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +DY+K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 322 LQNQFKTLSDNRAKCKCSKIQKPVENQ 348
LQ Q K LS +R + + E+Q
Sbjct: 375 LQLQVKVLSMSRLGAPGAVLPLLTESQ 401
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 174 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 232
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 233 QVKVLSMSR 241
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 262 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
V ++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +DY+K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 322 LQNQFKTLSDNR 333
LQ Q K LS +R
Sbjct: 375 LQLQVKVLSMSR 386
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 156 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 214
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 215 QVKVLSMSR 223
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 262 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
V ++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +DY+K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 322 LQNQFKTLSDNR 333
LQ Q K LS +R
Sbjct: 375 LQLQVKVLSMSR 386
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +DY+K LQ
Sbjct: 316 RVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 374
Query: 325 QFKTLSDNRA 334
Q K LS +R
Sbjct: 375 QVKVLSMSRV 384
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 158 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 216
Query: 325 QFKT 328
Q K
Sbjct: 217 QVKA 220
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA+RG AT P SIAER+RR +ISERM+ LQELVPN +K + + MLD +DY+K LQ Q
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 327 KTLSDNR 333
K LS +R
Sbjct: 381 KVLSMSR 387
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
NS+ AE A+ E ++ +RAKRG AT+ S+AERVRR RISERMR LQELVP
Sbjct: 220 NSSGAE-ASKENYIH--------VRAKRGQATNSHSLAERVRRERISERMRLLQELVPGC 270
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K T A MLD ++Y++ LQ Q + LS
Sbjct: 271 NKITGKAVMLDEIINYVQSLQQQVEFLS 298
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ+LVPN +K + A MLD +DY+K LQ
Sbjct: 314 RTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 372
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 373 QVKVLSMSR 381
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD VDY+K L+
Sbjct: 57 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 115
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 116 QVKVLSMSR 124
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K + A MLD ++Y+K LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQL 297
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 298 QVKVLSMSR 306
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 307
Query: 325 QFKTLS 330
Q ++S
Sbjct: 308 QVLSMS 313
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP DK T A MLD ++Y++ LQ Q
Sbjct: 161 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 220
Query: 326 FKTLS 330
+ LS
Sbjct: 221 VEFLS 225
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +DY+K LQ
Sbjct: 281 RVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 339
Query: 325 QFKTLSDNRA 334
Q K LS +R
Sbjct: 340 QVKVLSMSRV 349
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELVP +K T+ A M+D VDY+K L+
Sbjct: 162 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVDYVKFLRL 220
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 221 QVKVLSMSR 229
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 221 DSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVP---CKIRAKRGCATHPR 277
DS+H +S D G G S E VE+ +D P +RA+RG AT
Sbjct: 83 DSAHSKDSCKD-----GKSRRGKKASKE---VEEKSTTEDEPPKGYIHVRARRGQATDSH 134
Query: 278 SIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ + LS
Sbjct: 135 SLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 187
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER++ LQELVP +K T+ A MLD VDY+K L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 78 QVKVLSMSR 86
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RISER++ LQELVP+ +K T+ A MLD +DY+K
Sbjct: 136 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 194
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 195 FLRLQVKVLSMSR 207
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RISER++ LQELVP+ +K T+ A MLD +DY+K
Sbjct: 137 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 195
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 196 FLRLQVKVLSMSR 208
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q ++ ++RA+RG AT P SIAER+RR RISER++ LQELVPN +K T+ A ++D +DY
Sbjct: 127 QPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDY 185
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 186 VKFLRLQVKVLSMSR 200
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER++ LQELVP +K T+ A MLD VDY+K L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 74 QIKVLSMSR 82
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ+LVPN +K + + MLD +DY+K LQ
Sbjct: 319 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 377
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 378 QVKVLSMSR 386
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ LVPN +K + A MLD +DY+K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 374 QVKVLSMSR 382
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ LVPN +K + A MLD +DY+K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 374 QVKVLSMSR 382
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ LVPN +K + A MLD +DY+K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 374 QVKVLSMSR 382
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN K + A MLD ++Y+K LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSK-VDKASMLDEIIEYVKFLQL 408
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 409 QVKVLSMSR 417
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ LVPN +K + A MLD +DY+K LQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 296
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 297 QVKVLSMSR 305
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP DK T A MLD ++Y++ LQ Q
Sbjct: 150 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 209
Query: 326 FKTLS 330
+ LS
Sbjct: 210 VEFLS 214
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 257 QFQDSVP---CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
Q ++ P +RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD
Sbjct: 95 QMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILD 154
Query: 314 LAVDYIKDLQNQFKTLS 330
++Y++ LQNQ + LS
Sbjct: 155 EIINYVQSLQNQVEFLS 171
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 262 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
V ++RA+RG AT P SIAER+RR +IS+RM+ LQ+LVPN +K + A MLD +D++K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKF 374
Query: 322 LQNQFKTLSDNR 333
LQ Q K LS +R
Sbjct: 375 LQLQVKVLSMSR 386
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
NS S E A E F+ +RA+RG AT+ S+AERVRR +ISERMR LQELVP
Sbjct: 255 NSQSGE-APKENFIH--------VRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 305
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K T A MLD ++Y++ LQ Q + LS
Sbjct: 306 NKITGKAVMLDEIINYVQSLQQQVEFLS 333
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN +K T+ A ML+ ++YIK LQ
Sbjct: 280 ARVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQ 338
Query: 324 NQFKTLSDNR 333
Q K LS +R
Sbjct: 339 LQTKVLSMSR 348
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
NS S E A E F+ +RA+RG AT+ S+AERVRR +ISERMR LQELVP
Sbjct: 249 NSQSGE-APKENFIH--------VRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 299
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K T A MLD ++Y++ LQ Q + LS
Sbjct: 300 NKITGKAVMLDEIINYVQSLQQQVEFLS 327
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 125 VRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQ 184
Query: 326 FKTLS 330
+ LS
Sbjct: 185 VEFLS 189
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 326 FKTLS 330
+ LS
Sbjct: 171 VEFLS 175
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 111 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 170
Query: 326 FKTLS 330
+ LS
Sbjct: 171 VEFLS 175
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 121 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 180
Query: 326 FKTLS 330
+ LS
Sbjct: 181 VEFLS 185
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 109 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 168
Query: 326 FKTLS 330
+ LS
Sbjct: 169 VEFLS 173
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 326 FKTLS 330
+ LS
Sbjct: 171 VEFLS 175
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 326 FKTLS 330
+ LS
Sbjct: 199 VEFLS 203
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ S + + V K L+ D + +RA+RG AT SIAERVRR +ISERM+ LQ+LVP
Sbjct: 148 NNCSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC 205
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 206 DKITGKAGMLDEIINYVQSLQRQIEFLS 233
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 265 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 324
Query: 326 FKTLS 330
+ LS
Sbjct: 325 VEFLS 329
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 131 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQ 190
Query: 326 FKTLS 330
+ LS
Sbjct: 191 VEFLS 195
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 122 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 181
Query: 326 FKTLS 330
+ LS
Sbjct: 182 VEFLS 186
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 326 FKTLS 330
+ LS
Sbjct: 199 VEFLS 203
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 327 KTLS 330
++S
Sbjct: 299 LSMS 302
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK-----QTNTADMLDLAVDYI 319
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+
Sbjct: 284 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYV 343
Query: 320 KDLQNQ 325
K LQ Q
Sbjct: 344 KFLQLQ 349
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 120 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 179
Query: 326 FKTLS 330
+ LS
Sbjct: 180 VEFLS 184
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 240 VRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 299
Query: 326 FKTLS 330
+ LS
Sbjct: 300 VEFLS 304
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ RA+RG AT P SIAER+RR +ISERM+ LQ+LVPN +K + + MLD +DY+K LQ
Sbjct: 318 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 376
Query: 325 QFKTLSDNR 333
Q K L +R
Sbjct: 377 QVKVLCMSR 385
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERMR LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 137 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQ 196
Query: 326 FKTLS 330
+ LS
Sbjct: 197 VEFLS 201
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 232 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 291
Query: 326 FKTLS 330
+ LS
Sbjct: 292 VEFLS 296
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ S + + V K L+ D + +RA+RG AT SIAERVRR +ISERM+ LQ+LVP
Sbjct: 151 NNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC 208
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 209 DKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ S + + V K L+ D + +RA+RG AT SIAERVRR +ISERM+ LQ+LVP
Sbjct: 151 NNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC 208
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 209 DKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ S + + V K L+ D + +RA+RG AT SIAERVRR +ISERM+ LQ+LVP
Sbjct: 151 NNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC 208
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 209 DKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 164 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 242 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 301
Query: 326 FKTLS 330
+ LS
Sbjct: 302 VEFLS 306
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELV N +K T+ A MLD +DY+K LQ
Sbjct: 144 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 202
Query: 325 QFKTLS 330
Q ++S
Sbjct: 203 QVLSMS 208
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ S + + V K L+ D + +RA+RG AT SIAERVRR +ISERM+ LQ+LVP
Sbjct: 151 NNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC 208
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLS 330
DK T A MLD ++Y++ LQ Q + LS
Sbjct: 209 DKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 326 FKTLS 330
+ LS
Sbjct: 199 VEFLS 203
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S++ERVRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 105 VRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQ 164
Query: 326 FKTLS 330
+ LS
Sbjct: 165 VEFLS 169
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 326 FKTLS 330
+ LS
Sbjct: 203 VEFLS 207
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ERM+ LQELV N +K T+ A MLD +DY+K LQ
Sbjct: 116 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 174
Query: 325 QFKTLS 330
Q ++S
Sbjct: 175 QVLSMS 180
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 153 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 212
Query: 326 FKTLS 330
+ LS
Sbjct: 213 VEFLS 217
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 153 VRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
Query: 326 FKTLS 330
+ LS
Sbjct: 213 VEFLS 217
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 163 VRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 222
Query: 326 FKTLS 330
+ LS
Sbjct: 223 VEFLS 227
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 326 FKTLS 330
+ LS
Sbjct: 203 VEFLS 207
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 207
Query: 326 FKTLS 330
+ LS
Sbjct: 208 VEFLS 212
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 239
Query: 326 FKTLS 330
+ LS
Sbjct: 240 VEFLS 244
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 245 TSAEMAAVEKFLQFQDSVP------CKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 298
+S E AAV ++ ++ P +RA+RG AT S+AERVRR RISERM+ LQ L
Sbjct: 220 SSDENAAVPAKVELEEEKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSL 279
Query: 299 VPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 280 VPGCNKITGKALMLDEIINYVQSLQRQVEFLS 311
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 326 FKTLS 330
+ LS
Sbjct: 203 VEFLS 207
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 174 VRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQ 233
Query: 326 FKTLS 330
+ LS
Sbjct: 234 VEFLS 238
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 331 DNR 333
+R
Sbjct: 323 MSR 325
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 231 DMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
D +E N E S+ +E A E ++ +RA+RG AT+ S+AERVRR +ISE
Sbjct: 182 DQSKETVNKE---SSQSEEAPKENYIH--------MRARRGQATNSHSLAERVRREKISE 230
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RMR LQELVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 231 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 231 DMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
D +E N E S+ +E A E ++ +RA+RG AT+ S+AERVRR +ISE
Sbjct: 180 DQSKETVNKE---SSQSEEAPKENYIH--------MRARRGQATNSHSLAERVRREKISE 228
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RMR LQELVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 229 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 268
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 22/123 (17%)
Query: 230 TDMKREQGNGELGNSTSAEMAAV---------------EKFLQFQDSVP-------CKIR 267
D KR+ NG L ++ S ++ V EK + VP +R
Sbjct: 114 VDRKRKTTNGSLNSAQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVR 173
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ +
Sbjct: 174 ARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
Query: 328 TLS 330
LS
Sbjct: 234 FLS 236
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 147 VRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 326 FKTLSDNRA 334
+ LS A
Sbjct: 240 VEFLSMKLA 248
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 331 DNR 333
+R
Sbjct: 323 MSR 325
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 231 DMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
D +E N E S+ +E A E ++ +RA+RG AT+ S+AERVRR +ISE
Sbjct: 130 DQSKETVNKE---SSQSEEAPKENYIH--------MRARRGQATNSHSLAERVRREKISE 178
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RMR LQELVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 179 RMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 218
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 326 FKTLSDNRA 334
+ LS A
Sbjct: 240 VEFLSMKLA 248
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 135 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQ 194
Query: 326 FKTLS 330
+ LS
Sbjct: 195 VEFLS 199
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR +IS+RM+ LQELVPN ++ T+ A MLD ++Y+K LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 325 QFKTLS 330
Q K S
Sbjct: 356 QVKVRS 361
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++Y++ LQ Q
Sbjct: 79 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 138
Query: 326 FKTLS 330
+ LS
Sbjct: 139 VEFLS 143
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERMR LQ LVP DK T A MLD ++Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 172 VRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 231
Query: 326 FKTLS 330
+ LS
Sbjct: 232 VEFLS 236
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 164 VRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 223
Query: 326 FKTLS 330
+ LS
Sbjct: 224 VEFLS 228
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQNQ
Sbjct: 171 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQ 230
Query: 326 FKTLS 330
+ LS
Sbjct: 231 VEFLS 235
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 233 KREQGNGELGNSTSAEMAAVEKFLQFQDSVP------CKIRAKRGCATHPRSIAERVRRT 286
KRE G G N E +A EK + P +RA+RG AT S+AERVRR
Sbjct: 218 KRENGRGFEEND---ENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRRE 274
Query: 287 RISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVE 346
+ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q + LS A +++ V+
Sbjct: 275 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVD 334
Query: 347 NQI 349
+ I
Sbjct: 335 SLI 337
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQNQ
Sbjct: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
Query: 326 FKTLS 330
+ LS
Sbjct: 243 VEFLS 247
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERMR LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 326 FKT 328
+
Sbjct: 206 VEV 208
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 326 FKTLS 330
+ LS
Sbjct: 401 VEFLS 405
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 326 FKTLS 330
+ LS
Sbjct: 401 VEFLS 405
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P SIAER+RR RI+ERM+ LQELVP+ +K T+ A MLD +DY+K LQ Q K LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 331 DNR 333
+R
Sbjct: 228 MSR 230
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 254 KFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
K L QD + +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD
Sbjct: 44 KILSKQDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLD 101
Query: 314 LAVDYIKDLQNQFKTLS 330
++Y++ LQ Q ++LS
Sbjct: 102 EIINYVQSLQRQVESLS 118
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+ER++ LQ+LVP K A MLD+ +DY++ LQNQ
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 326 FKTLS 330
+ LS
Sbjct: 164 IEFLS 168
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AERVRR RISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 246 VRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 305
Query: 326 FKTLS 330
+ LS
Sbjct: 306 VEFLS 310
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+ER++ LQ+LVP K A MLD+ +DY++ LQNQ
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 326 FKTLS 330
+ LS
Sbjct: 164 IEFLS 168
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 326 FKTLS 330
+ LS
Sbjct: 363 VEFLS 367
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNR 333
T P SIAER+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS +R
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 279
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 231 DMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISE 290
D +E N E S+ +E A E ++ +RA+RG AT+ S+AERVRR +ISE
Sbjct: 182 DQSKETVNKE---SSQSEEAPKENYIH--------MRARRGQATNSHSLAERVRREKISE 230
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RMR LQEL P +K T A MLD ++Y++ LQ Q + LS
Sbjct: 231 RMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 216 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQ 275
Query: 326 FKTLSDNRAKCKCSKI 341
+ LS A +++
Sbjct: 276 VEFLSMKLASVNTTRV 291
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 326 FKTLS 330
+ LS
Sbjct: 363 VEFLS 367
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 361
Query: 326 FKTLS 330
+ LS
Sbjct: 362 VEFLS 366
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 326 FKTLS 330
+ LS
Sbjct: 429 VEFLS 433
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 168 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 227
Query: 326 FKTLS 330
+ LS
Sbjct: 228 IEFLS 232
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQELVP K T A MLD ++Y++ LQ Q
Sbjct: 325 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 384
Query: 326 FKTLS 330
+ LS
Sbjct: 385 VEFLS 389
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 282
Query: 326 FKTLS 330
+ LS
Sbjct: 283 IEFLS 287
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 326 FKTLS 330
+ LS
Sbjct: 363 VEFLS 367
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 441 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 500
Query: 326 FKTLS 330
+ LS
Sbjct: 501 VENLS 505
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 138 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 197
Query: 326 FKTLS 330
+ LS
Sbjct: 198 VEFLS 202
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 290 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQ 349
Query: 326 FKTLS 330
+ LS
Sbjct: 350 VEFLS 354
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 193 DGPTHGKV--RNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMA 250
D P H KV N N D + +GS + S T+S T N E TS A
Sbjct: 66 DKPHHPKVVAENDNKDKRI-----KFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKA 120
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
+ + D + +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A
Sbjct: 121 S-----EKPDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAG 173
Query: 311 MLDLAVDYIKDLQNQFKTLS 330
MLD ++Y++ LQ Q + LS
Sbjct: 174 MLDEIINYVQSLQRQVEFLS 193
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 146 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 339 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 398
Query: 326 FKTLSDNRAKCKCSKIQKPVENQI 349
+ LS A +++ +EN I
Sbjct: 399 VEFLSMKLASVN-TRMDLSIENLI 421
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 291 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 350
Query: 326 FKTLS 330
+ LS
Sbjct: 351 VEFLS 355
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 258 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 317
Query: 326 FKTLS 330
+ LS
Sbjct: 318 VEFLS 322
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+ER++ LQ+LVP K A MLD+ +DY++ LQNQ
Sbjct: 47 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 106
Query: 326 FKTLS 330
+ LS
Sbjct: 107 IEFLS 111
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 140 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 199
Query: 326 FKTLS 330
+ LS
Sbjct: 200 VEFLS 204
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 172 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 231
Query: 326 FKTLS 330
+ LS
Sbjct: 232 IEFLS 236
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RAKRG AT+ S+AER+RR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ
Sbjct: 136 VHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQ 195
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 196 RQVEFLS 202
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 319
Query: 326 FKTLS 330
+ LS
Sbjct: 320 VEFLS 324
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 249 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 308
Query: 326 FKTLS 330
+ LS
Sbjct: 309 VEFLS 313
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 386 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 445
Query: 326 FKTLS 330
+ LS
Sbjct: 446 VEFLS 450
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 319
Query: 326 FKTLS 330
+ LS
Sbjct: 320 VEFLS 324
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 193 DGPTHGKV--RNGNGDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMA 250
D P H KV N N D + +GS + S T+S T N E TS A
Sbjct: 122 DKPHHPKVVAENDNKDKRI-----KFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKA 176
Query: 251 AVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
+ EK D + +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A
Sbjct: 177 S-EK----PDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAG 229
Query: 311 MLDLAVDYIKDLQNQFKTLS 330
MLD ++Y++ LQ Q + LS
Sbjct: 230 MLDEIINYVQSLQRQVEFLS 249
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+E++R LQ+LVP K A MLD+ ++Y++ LQNQ
Sbjct: 140 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 199
Query: 326 FKTLS 330
+ LS
Sbjct: 200 IEFLS 204
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 253 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 312
Query: 326 FKTLS 330
+ LS
Sbjct: 313 VEFLS 317
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 407 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 466
Query: 326 FKTLS 330
+ LS
Sbjct: 467 VEFLS 471
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP D+ T A +LD ++Y++ LQNQ
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQ 204
Query: 326 FKTLS 330
+ LS
Sbjct: 205 VEFLS 209
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T A MLD ++YI+ LQ Q
Sbjct: 48 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQ 107
Query: 326 FKTLS 330
+ LS
Sbjct: 108 VEFLS 112
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+E++R LQ+LVP K A MLD+ ++Y++ LQNQ
Sbjct: 123 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 182
Query: 326 FKTLS 330
+ LS
Sbjct: 183 IEFLS 187
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 372 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 431
Query: 326 FKTLS 330
+ LS
Sbjct: 432 VEFLS 436
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 385 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 444
Query: 326 FKTLS 330
+ LS
Sbjct: 445 VEFLS 449
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+E++R LQ+LVP K A MLD+ ++Y++ LQNQ
Sbjct: 119 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 178
Query: 326 FKTLS 330
+ LS
Sbjct: 179 IEFLS 183
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 326 FKTLS 330
+ LS
Sbjct: 429 VEFLS 433
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 106 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 165
Query: 326 FKTLS 330
+ LS
Sbjct: 166 VEFLS 170
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 305 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQ 364
Query: 326 FKTLS 330
+ LS
Sbjct: 365 VEFLS 369
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 317 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 376
Query: 326 FKTLS 330
+ LS
Sbjct: 377 VEFLS 381
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER+RR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 138 LRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 197
Query: 326 FKTLS 330
+ LS
Sbjct: 198 VEFLS 202
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 350 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 409
Query: 326 FKTLS 330
+ LS
Sbjct: 410 VEFLS 414
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 372 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 431
Query: 326 FKTLS 330
+ LS
Sbjct: 432 VEFLS 436
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 371 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 430
Query: 326 FKTLS 330
+ LS
Sbjct: 431 VEFLS 435
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 315
Query: 326 FKTLS 330
+ LS
Sbjct: 316 VEFLS 320
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 373 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 432
Query: 326 FKTLS 330
+ LS
Sbjct: 433 VEFLS 437
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 326 FKTLS 330
+ LS
Sbjct: 318 VEFLS 322
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 372 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 431
Query: 326 FKTLS 330
+ LS
Sbjct: 432 VEFLS 436
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 361
Query: 326 FKTLS 330
+ LS
Sbjct: 362 VEFLS 366
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 326 FKTLS 330
+ LS
Sbjct: 318 VEFLS 322
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 358 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 417
Query: 326 FKTLS 330
+ LS
Sbjct: 418 VEFLS 422
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 263 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 322
Query: 326 FKTLS 330
+ LS
Sbjct: 323 VEFLS 327
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 326 FKTLS 330
+ LS
Sbjct: 308 VEFLS 312
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 358 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 417
Query: 326 FKTLS 330
+ LS
Sbjct: 418 VEFLS 422
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 368 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 427
Query: 326 FKTLS 330
+ LS
Sbjct: 428 VEFLS 432
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 388 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 447
Query: 326 FKTLS 330
++LS
Sbjct: 448 VESLS 452
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 326 FKTLS 330
+ LS
Sbjct: 251 VEFLS 255
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 252 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 311
Query: 326 FKTLS 330
+ LS
Sbjct: 312 VEFLS 316
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 326 FKTLS 330
+ LS
Sbjct: 308 VEFLS 312
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 326 FKTLS 330
+ LS
Sbjct: 318 VEFLS 322
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 346 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 405
Query: 326 FKTLS 330
+ LS
Sbjct: 406 VEFLS 410
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 326 FKTLS 330
+ LS
Sbjct: 251 VEFLS 255
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCK-----IRAKRGCATHPRSIA 280
+E D Q G+ +++A+ + L Q S P K +RA+RG AT+ S+A
Sbjct: 176 SEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLA 235
Query: 281 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
ERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q + LS
Sbjct: 236 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 285
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 257 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 316
Query: 326 FKTLS 330
+ LS
Sbjct: 317 VEFLS 321
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 256 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 326 FKTLS 330
+ LS
Sbjct: 316 VEFLS 320
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 237 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 296
Query: 326 FKTLS 330
+ LS
Sbjct: 297 VEFLS 301
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 326 FKTLS 330
+ LS
Sbjct: 301 VEFLS 305
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 246 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 305
Query: 326 FKTLS 330
+ LS
Sbjct: 306 VEFLS 310
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 256 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 326 FKTLS 330
+ LS
Sbjct: 316 VEFLS 320
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 369 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 428
Query: 326 FKTLS 330
+ LS
Sbjct: 429 VEFLS 433
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 33 VRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQ 92
Query: 326 FKTLSDNRAKCK 337
+ LS A K
Sbjct: 93 VEFLSMKLAAVK 104
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 242 GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 301
GN +A EK +D + +RA+RG AT S+AERVRR +I ERM+ LQ LVP+
Sbjct: 236 GNDENAGAVEEEKSEPVKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPS 293
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K T A MLD ++Y++ LQ Q + LS
Sbjct: 294 CNKITGKALMLDEIINYVQSLQRQVEFLS 322
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 326 FKTLS 330
+ LS
Sbjct: 301 VEFLS 305
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 31 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 90
Query: 326 FKTLS 330
+ LS
Sbjct: 91 VEFLS 95
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ LVP K T A MLD ++Y++ LQ Q
Sbjct: 259 VRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQ 318
Query: 326 FKTLS 330
+ LS
Sbjct: 319 VEFLS 323
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 147 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP+ +K T A MLD ++Y++ LQ Q
Sbjct: 32 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQ 91
Query: 326 FKTLS 330
+ LS
Sbjct: 92 VEFLS 96
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 204
Query: 326 FKTLS 330
+ LS
Sbjct: 205 VEFLS 209
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 253 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 312
Query: 326 FKTLS 330
+ LS
Sbjct: 313 VEFLS 317
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 167 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 226
Query: 326 FKTLS 330
+ LS
Sbjct: 227 VEFLS 231
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 629 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 688
Query: 326 FKTLS 330
+ LS
Sbjct: 689 VEFLS 693
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 404 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 463
Query: 326 FKTLS 330
+ LS
Sbjct: 464 VEFLS 468
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERM+ LQ LVP +K T A MLD ++Y++ LQ Q
Sbjct: 111 VRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQ 170
Query: 326 FKTLS 330
+ LS
Sbjct: 171 VEFLS 175
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 234 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 293
Query: 326 FKTLS 330
+ LS
Sbjct: 294 VEFLS 298
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 253
Query: 326 FKTLS 330
+ LS
Sbjct: 254 VEFLS 258
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 230 TDMKRE--QGNGELGNSTSAEMAAVEKFLQFQDSVPCK----IRAKRGCATHPRSIAERV 283
TD +R+ G G G+ E+ A D+ P K +RA+RG AT S+AERV
Sbjct: 221 TDEERKPAAGEGWRGSGKGKELVAA-------DAEPPKDYIHVRARRGQATDSHSLAERV 273
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
RR +I ERM+ LQ+LVP K T A MLD ++Y++ LQ Q + LS
Sbjct: 274 RREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 320
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 150 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 209
Query: 326 FKTLS 330
+ LS
Sbjct: 210 VEFLS 214
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERM+ LQ LVP +K T A MLD ++Y++ LQ Q
Sbjct: 81 VRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQ 140
Query: 326 FKTLS 330
+ LS
Sbjct: 141 VEFLS 145
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 27 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 86
Query: 326 FKTLS 330
+ LS
Sbjct: 87 VEFLS 91
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 253
Query: 326 FKTLS 330
+ LS
Sbjct: 254 VEFLS 258
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 211 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQ 270
Query: 326 FKTLS 330
+ LS
Sbjct: 271 VEFLS 275
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 76 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 135
Query: 326 FKTLS 330
+ LS
Sbjct: 136 VEFLS 140
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 301 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 360
Query: 326 FKTLS 330
+ LS
Sbjct: 361 VEFLS 365
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 353 VRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 412
Query: 326 FKTLS 330
+ LS
Sbjct: 413 VEFLS 417
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 193 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 252
Query: 326 FKTLS 330
+ LS
Sbjct: 253 VEFLS 257
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K GN E + TS E++ Q D + +RA+RG AT S+AER RR
Sbjct: 149 TESNMKGKSNMGNTEASSDTSKEISKGASESQKLDYI--HVRARRGQATDRHSLAERARR 206
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ+LVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 207 EKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLS 251
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RISERM+ LQELVP K A LD ++Y++ LQ Q
Sbjct: 132 VRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQ 191
Query: 326 FKTLS 330
+ LS
Sbjct: 192 VEFLS 196
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT SIAERVRR +I+ ++R LQ+LVP K A ML+ ++Y+ LQNQ
Sbjct: 149 VRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQ 208
Query: 326 FKTLSDNRAKCKCS 339
+ LS A CS
Sbjct: 209 VEFLSMELAAASCS 222
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 73 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 132
Query: 326 FKTLS 330
+ LS
Sbjct: 133 IEFLS 137
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 253
Query: 326 FKTLS 330
+ LS
Sbjct: 254 VEFLS 258
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 239 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 298
Query: 326 FKTLS 330
+ LS
Sbjct: 299 VEFLS 303
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 118 IRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 177
Query: 326 FKTLS 330
+ LS
Sbjct: 178 VEFLS 182
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 299 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 358
Query: 326 FKTLS 330
+ LS
Sbjct: 359 VEFLS 363
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 301 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 360
Query: 326 FKTLS 330
+ LS
Sbjct: 361 VEFLS 365
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 253
Query: 326 FKTLS 330
+ LS
Sbjct: 254 VEFLS 258
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 326 FKTLS 330
+ LS
Sbjct: 309 VEFLS 313
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 263
Query: 326 FKTLS 330
+ LS
Sbjct: 264 VEFLS 268
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 190 VRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 249
Query: 326 FKTLS 330
+ LS
Sbjct: 250 VEFLS 254
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 263
Query: 326 FKTLS 330
+ LS
Sbjct: 264 VEFLS 268
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 326 FKTLS 330
+ LS
Sbjct: 309 VEFLS 313
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 263
Query: 326 FKTLS 330
+ LS
Sbjct: 264 VEFLS 268
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I++RM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 296 VRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQ 355
Query: 326 FKTLS 330
+ LS
Sbjct: 356 VEFLS 360
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 230 TDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
TD R++ G GN E+A + +RA+RG AT S+AERVRR +IS
Sbjct: 243 TDAARDEA-GSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKIS 301
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
ERM+ LQ+LVP K T A MLD ++Y++ LQ Q + LS
Sbjct: 302 ERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLS 342
>gi|326509201|dbj|BAJ86993.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 26/95 (27%)
Query: 257 QFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK------------ 304
+ Q+ VP K+ ++H RSIAE RRT IS+R+R LQELVPNM+K
Sbjct: 192 RIQELVP---NVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPY 248
Query: 305 -----------QTNTADMLDLAVDYIKDLQNQFKT 328
TN +DMLDLAVDYIK+LQ Q KT
Sbjct: 249 TDMDLPGINPLPTNMSDMLDLAVDYIKELQMQIKT 283
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG A S+AERVRR +ISE+M LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 157 VRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 230 TDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
TD R++ G GN E+A + +RA+RG AT S+AERVRR +IS
Sbjct: 223 TDAARDEA-GSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKIS 281
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
ERM+ LQ+LVP K T A MLD ++Y++ LQ Q + LS
Sbjct: 282 ERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLS 322
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 119 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 178
Query: 326 FKTLS 330
+ LS
Sbjct: 179 VEFLS 183
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 174 VRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 233
Query: 326 FKTLS 330
+ LS
Sbjct: 234 VEFLS 238
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 69 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 128
Query: 326 FKTLS 330
+ LS
Sbjct: 129 IEFLS 133
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 174 VRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 233
Query: 326 FKTLS 330
+ LS
Sbjct: 234 VEFLS 238
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 122 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQ 181
Query: 326 FKTLS 330
+ LS
Sbjct: 182 VEFLS 186
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 125 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 184
Query: 326 FKTLS 330
+ LS
Sbjct: 185 VEFLS 189
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM LQ LVP DK T A +LD ++Y++ LQNQ
Sbjct: 138 VRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQ 197
Query: 326 FKTLS 330
+ LS
Sbjct: 198 VEFLS 202
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+L+P +K A MLD ++Y++ LQ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 326 FKTLS 330
+ LS
Sbjct: 252 VEFLS 256
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 64 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 123
Query: 326 FKTLSDNRAKCKCSKI 341
+ LS A ++
Sbjct: 124 VEFLSMKLATVNVPRL 139
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 202
Query: 326 FKTLS 330
+ LS
Sbjct: 203 VEFLS 207
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 185 VRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 244
Query: 326 FKTLS 330
+ LS
Sbjct: 245 VEFLS 249
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RAK+GCA P+SIA R RR RIS+R++ LQEL+PN K + ML+ A++Y+K LQ
Sbjct: 407 KPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQL 465
Query: 325 QFKTL 329
Q K L
Sbjct: 466 QVKVL 470
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 76 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 135
Query: 326 FKTLS 330
+ LS
Sbjct: 136 IEFLS 140
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RAK+GCA P+SIA R RR RIS+R++ LQEL+PN K + ML+ A++Y+K LQ
Sbjct: 407 KPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQL 465
Query: 325 QFKTLSDN 332
Q K L ++
Sbjct: 466 QVKVLMND 473
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 277 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 336
Query: 326 FKTLS 330
+ LS
Sbjct: 337 VEFLS 341
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+L+P +K A MLD ++Y++ LQ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 326 FKTLS 330
+ LS
Sbjct: 252 VEFLS 256
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 264 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 323
Query: 326 FKTLS 330
+ LS
Sbjct: 324 VEFLS 328
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 264 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 323
Query: 326 FKTLS 330
+ LS
Sbjct: 324 VEFLS 328
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 58 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 117
Query: 326 FKTLS 330
+ LS
Sbjct: 118 VEFLS 122
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA++G AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 326 FKTLS 330
+ LS
Sbjct: 236 VEFLS 240
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 252 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 311
Query: 326 FKTLS 330
+ LS
Sbjct: 312 VEFLS 316
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 136 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR RI+E++R LQ+LVP K A MLD+ ++Y++ LQNQ
Sbjct: 121 VRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 180
Query: 326 FKT 328
+
Sbjct: 181 IEV 183
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 280 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 339
Query: 326 FKTLS 330
+ LS
Sbjct: 340 VEFLS 344
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 326 FKTLS 330
+ LS
Sbjct: 184 IEFLS 188
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 326 FKTLS 330
+ LS
Sbjct: 158 IEFLS 162
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 280 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 339
Query: 326 FKTLS 330
+ LS
Sbjct: 340 VEFLS 344
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 1028 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1087
Query: 326 FKTLS 330
+ LS
Sbjct: 1088 VEFLS 1092
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT SIAER+RR +I+ ++R LQ++VP K A ML+ ++Y+ LQNQ
Sbjct: 158 VRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQ 217
Query: 326 FKTLSDNRAKCKCS 339
+ LS A CS
Sbjct: 218 VEFLSMELAAASCS 231
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 324 NQFKTLS 330
NQ + LS
Sbjct: 203 NQVEFLS 209
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER+RR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 153 VRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 212
Query: 326 FKTLS 330
+ LS
Sbjct: 213 VEFLS 217
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 326 FKTLS 330
+ LS
Sbjct: 184 IEFLS 188
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
+D +RA+RG AT SIAERVRR +I+ER++ LQ++VP K A MLD ++Y
Sbjct: 142 KDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINY 201
Query: 319 IKDLQNQFKTLS 330
++ LQNQ + LS
Sbjct: 202 VQSLQNQVEFLS 213
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 326 FKTLS 330
+ LS
Sbjct: 688 VEFLS 692
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 270 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 329
Query: 326 FKTLS 330
+ LS
Sbjct: 330 VEFLS 334
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 74 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 133
Query: 326 FKTLS 330
+ LS
Sbjct: 134 VEFLS 138
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 326 FKTLS 330
+ LS
Sbjct: 688 VEFLS 692
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 279 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 338
Query: 326 FKTLS 330
+ LS
Sbjct: 339 VEFLS 343
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT P S+AERVRR +IS RM+ LQ LVP DK T A +LD + ++ LQNQ
Sbjct: 164 VRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSLQNQ 223
Query: 326 FKTLS 330
+ L+
Sbjct: 224 VEFLA 228
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 326 FKTLS 330
+ LS
Sbjct: 688 VEFLS 692
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA++G AT+ S+AER+RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 174 VRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQ 233
Query: 326 FKTLS 330
+ LS
Sbjct: 234 VEFLS 238
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 249 MAAVEKFLQFQDSVP---CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQ 305
M ++EK +D P +RA+RG AT S+AERVRR +I+ER+R LQ++VP K
Sbjct: 131 MKSIEK----EDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 186
Query: 306 TNTADMLDLAVDYIKDLQNQFKTLS 330
A MLD ++Y++ LQNQ + LS
Sbjct: 187 MGMAVMLDEIINYVQSLQNQVEFLS 211
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 128 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 187
Query: 326 FKTLS 330
+ LS
Sbjct: 188 IEFLS 192
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 326 FKTLS 330
+ LS
Sbjct: 184 IEFLS 188
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 1039 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1098
Query: 326 FKTLS 330
+ LS
Sbjct: 1099 VEFLS 1103
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 156 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 215
Query: 326 FKTLS 330
+ LS
Sbjct: 216 VEFLS 220
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM LQ+LVP DK T A +L+ ++Y++ LQ+Q
Sbjct: 119 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 178
Query: 326 FKTLS 330
+ LS
Sbjct: 179 VEFLS 183
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 123 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 182
Query: 326 FKTLS 330
+ LS
Sbjct: 183 VEFLS 187
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR RISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 93 VRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQ 152
Query: 326 FKTLS 330
+ LS
Sbjct: 153 VEFLS 157
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 230 TDMKRE--QGNGELGNSTSAEMAAVEKFLQFQDSVPCK----IRAKRGCATHPRSIAERV 283
TD +R+ G G G+ E+ A D+ P K +RA+RG AT S+AERV
Sbjct: 221 TDEERKPAAGEGWRGSGKGKELVAA-------DAEPPKDYIHVRARRGQATDSHSLAERV 273
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
RR +I ERM+ LQ+LVP K T A MLD ++Y++ LQ Q +
Sbjct: 274 RREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+ G AT+ S+AERVRR +ISERM+ LQ+LVP K A MLD ++Y++ LQ Q
Sbjct: 263 IRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQ 322
Query: 326 FKTLS 330
+ LS
Sbjct: 323 VEFLS 327
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQ 207
Query: 326 FKTLS 330
+ LS
Sbjct: 208 VELLS 212
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ERM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 326 FKTLS 330
+ LS
Sbjct: 158 IEFLS 162
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP+ K T A MLD ++Y++ LQ Q
Sbjct: 25 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQ 84
Query: 326 FKTLS 330
+ LS
Sbjct: 85 IEFLS 89
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+ G AT+ S+AERVRR +ISERM+ LQ+LVP K A MLD ++Y++ LQ Q
Sbjct: 263 IRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQ 322
Query: 326 FKTLS 330
+ LS
Sbjct: 323 VEFLS 327
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 112 VRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQ 171
Query: 326 FKTLSDNRAKCKCSKIQKPVENQI 349
+ LS K + V N+I
Sbjct: 172 VEFLS-----MKLEAVNAHVNNRI 190
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 156 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 215
Query: 326 FKTLS 330
+ LS
Sbjct: 216 VEFLS 220
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K GN E + TS E + Q D + +RA+RG AT S+AER RR
Sbjct: 147 TESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYI--HVRARRGQATDRHSLAERARR 204
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K GN E + TS E + Q D + +RA+RG AT S+AER RR
Sbjct: 147 TESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYI--HVRARRGQATDRHSLAERARR 204
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K GN E + TS E + Q D + +RA+RG AT S+AER RR
Sbjct: 147 TESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYI--HVRARRGQATDRHSLAERARR 204
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 156 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 215
Query: 326 FKTLS 330
+ LS
Sbjct: 216 VEFLS 220
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K GN E + TS E + Q D + +RA+RG AT S+AER RR
Sbjct: 130 TESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYI--HVRARRGQATDRHSLAERARR 187
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 188 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 232
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 232 MKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISER 291
++ E G +S +A+ A QD + +RA+RG AT S+AER RR +ISER
Sbjct: 96 LRTEAGTDSGNSSKAADKNATPPEPPKQDYI--HVRARRGQATDSHSLAERARREKISER 153
Query: 292 MRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
M+ LQ+LVP +K A +LD ++YI+ LQ+Q + LS
Sbjct: 154 MKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLS 192
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 252 FRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 311
Query: 326 FKTLS 330
+ LS
Sbjct: 312 VEFLS 316
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +IS+RM+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 158 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 217
Query: 326 FKTLS 330
+ LS
Sbjct: 218 VEFLS 222
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
IRA+ G AT+ S+AERVRR +ISERM+ LQ+LVP K A MLD ++Y++ LQ Q
Sbjct: 265 IRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQ 324
Query: 326 FKTLS 330
+ LS
Sbjct: 325 VEFLS 329
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 220 NDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSI 279
N+ S TE+ TD + G + S + A E QD + +RA+RG AT S+
Sbjct: 88 NNGSLRTEAETDPR------SAGKAVSKSLPAAEP--PKQDYI--HVRARRGQATDSHSL 137
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q + LS
Sbjct: 138 AERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLS 188
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM LQ+LVP ++ T A MLD ++Y++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 326 FKTLS 330
+ LS
Sbjct: 251 VEFLS 255
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQ
Sbjct: 154 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQ 213
Query: 324 NQFKTLS 330
NQ + LS
Sbjct: 214 NQVEFLS 220
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM LQ+LVP ++ T A MLD ++Y++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 253
Query: 326 FKTLS 330
+ LS
Sbjct: 254 VEFLS 258
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 169 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 228
Query: 326 FKTLS 330
+ LS
Sbjct: 229 VEFLS 233
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 126 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 185
Query: 326 FKTLS 330
+ LS
Sbjct: 186 VEFLS 190
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA RVRR RISER++ LQ L+PN DK + ML+ A+ Y++ L+
Sbjct: 638 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 696
Query: 325 QFKTLSDN 332
Q K L ++
Sbjct: 697 QIKMLKND 704
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ LVP DK +LD ++Y+K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQ 167
Query: 326 FKTL 329
+ L
Sbjct: 168 VEFL 171
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 226 TESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRR 285
TES K N E + TS E + +Q D + +RA+RG AT S+AER RR
Sbjct: 147 TESSMKGKSNMRNTEASSDTSKETSKKASEIQKLDYI--HVRARRGQATDRHSLAERARR 204
Query: 286 TRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 326 FKTLS 330
+ LS
Sbjct: 211 VEFLS 215
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 16 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 75
Query: 326 FKTLS 330
+ LS
Sbjct: 76 VEFLS 80
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA RVRR RISER++ LQ L+PN DK + ML+ A+ Y++ L+
Sbjct: 753 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLEL 811
Query: 325 QFKTLSDN 332
Q K L ++
Sbjct: 812 QIKMLKND 819
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
Query: 326 FKTLS 330
+ LS
Sbjct: 202 VEFLS 206
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T A M+D ++Y++ LQ Q
Sbjct: 218 VRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQ 277
Query: 326 FKTLS 330
+ LS
Sbjct: 278 VEFLS 282
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ LVP DK +LD ++Y+K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 326 FKTL 329
+ L
Sbjct: 168 VEFL 171
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 326 FKTLS 330
+ LS
Sbjct: 211 VEFLS 215
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 190 VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 249
Query: 326 FKTLS 330
+ LS
Sbjct: 250 VEFLS 254
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
Query: 326 FKTLS 330
+ LS
Sbjct: 207 VEFLS 211
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 260 DSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
D +P +RA+RG AT S+AER RR +I+ RM+ LQELVP DK TA +LD +++
Sbjct: 177 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 236
Query: 319 IKDLQNQFKTLS 330
++ LQ Q + LS
Sbjct: 237 VQSLQRQVEMLS 248
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 326 FKTLS 330
+ LS
Sbjct: 206 VEFLS 210
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA RVRR RISER++ LQ L+PN DK + ML+ A+ Y++ L+
Sbjct: 821 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 879
Query: 325 QFKTLSDN 332
Q K L ++
Sbjct: 880 QIKMLKND 887
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 326 FKTLS 330
+ LS
Sbjct: 211 VEFLS 215
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 201 RNGNGDTQFYSTGFSYGSWNDSSHFT-ESFTDMKREQGNGELGNSTSAEMAAVEKFL-QF 258
+ G+G Q GF GS N + + +S QG + A+ AA + Q
Sbjct: 165 KGGDGSMQGLFNGFGAGSMNGTGQASNQSMQHFNHPQGGAMQAQNFGAQGAATTAVMNQP 224
Query: 259 QDS-----VPC----KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
Q S P ++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K
Sbjct: 225 QASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 279
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 190 VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 249
Query: 326 FKTLS 330
+ LS
Sbjct: 250 VEFLS 254
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ LVP DK +LD ++Y+K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 326 FKTL 329
+ L
Sbjct: 168 VEFL 171
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K T A +LD ++YI+ LQ Q
Sbjct: 141 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K A +LD ++YI+ LQ+Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 326 FKTLS 330
+ LS
Sbjct: 160 VEFLS 164
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 260 DSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
D +P +RA+RG AT S+AER RR +I+ RM+ LQELVP DK TA +LD +++
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 319 IKDLQNQFKTLS 330
++ LQ Q + LS
Sbjct: 238 VQTLQRQVEMLS 249
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R L+++VP K A MLD ++Y++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 207
Query: 326 FKTLS 330
+ LS
Sbjct: 208 VEFLS 212
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG A S+AERVRR +IS +M+ LQ LVP DK T +LD ++YI LQ+Q
Sbjct: 136 VRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQDQ 195
Query: 326 FKTLSDNRA 334
K+L + A
Sbjct: 196 VKSLMEELA 204
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A ML+ ++Y++ LQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQ 65
Query: 326 FKTLS 330
+ LS
Sbjct: 66 IEFLS 70
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ LVP +K A MLD ++Y++ LQ Q
Sbjct: 6 VRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQ 65
Query: 326 FKTLS 330
+ LS
Sbjct: 66 VEFLS 70
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ LVP DK +LD ++Y+K LQNQ
Sbjct: 42 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 101
Query: 326 FKTL 329
+ L
Sbjct: 102 VEFL 105
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R++RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T A +L+ ++Y++ LQ+Q
Sbjct: 112 LRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQ 171
Query: 326 FKTLS 330
+ LS
Sbjct: 172 VEILS 176
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 259 QDSVPCK--------IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
Q + PC+ +RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A
Sbjct: 124 QSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 183
Query: 311 MLDLAVDYIKDLQNQFKTLS 330
+LD ++YI+ LQ Q + LS
Sbjct: 184 VLDEIINYIQSLQRQVEFLS 203
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 133 VRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 192
Query: 326 FKTLS 330
+ LS
Sbjct: 193 AEFLS 197
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K A MLD ++Y++ LQNQ
Sbjct: 73 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 132
Query: 326 FKTLS 330
+ LS
Sbjct: 133 VEFLS 137
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
Query: 326 FKTLS 330
+ LS
Sbjct: 151 VEFLS 155
>gi|47497310|dbj|BAD19352.1| unknown protein [Oryza sativa Japonica Group]
Length = 153
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 217 GSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQ-DSVPCKIRAKRGCATH 275
G W +S + + + G + ++++ EMA ++++LQ Q D VP K+RAKRGCATH
Sbjct: 66 GPWEESRDIISTLGGYESQFGG--MASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATH 123
Query: 276 PRSIAERVR 284
PRSIAERVR
Sbjct: 124 PRSIAERVR 132
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT SIAERVRR +I R+R LQ+LVP K A MLD ++Y+ LQNQ
Sbjct: 202 VRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQNQ 261
Query: 326 FKTLSDNRA 334
+ LS A
Sbjct: 262 VEFLSRELA 270
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ
Sbjct: 136 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 195
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 196 RQVEFLS 202
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 134 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 193
Query: 326 FKTLS 330
+ LS
Sbjct: 194 VEFLS 198
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 326 FKTLS 330
+ LS
Sbjct: 190 VEFLS 194
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+SI R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 206 KTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 264
Query: 325 QFKTLS 330
Q K LS
Sbjct: 265 QIKLLS 270
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 59 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 118
Query: 326 FKTLS 330
+ LS
Sbjct: 119 VEFLS 123
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 326 FKTLS 330
+ LS
Sbjct: 211 VEFLS 215
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 95 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 154
Query: 326 FKTLS 330
+ LS
Sbjct: 155 VEFLS 159
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ +M+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 177 VRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQ 236
Query: 326 FKTLS 330
+ LS
Sbjct: 237 VEFLS 241
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 131 VRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 190
Query: 326 FKTLS 330
+ LS
Sbjct: 191 VEFLS 195
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ
Sbjct: 142 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 201
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 202 RQVEFLS 208
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 257 QFQDSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
Q +D +P +RA+RG AT S+AER RR +I++RM+ LQELVP +K + TA +LD
Sbjct: 167 QEEDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEI 226
Query: 316 VDYIKDLQNQFKTLS 330
+++++ LQ Q + LS
Sbjct: 227 INHVQSLQCQVEFLS 241
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT +AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 151 VRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 326 FKTLS 330
+ LS
Sbjct: 211 VEFLS 215
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 82 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 141
Query: 326 FKTLS 330
+ LS
Sbjct: 142 VEFLS 146
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 202 VRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 261
Query: 326 FKTLS 330
+ LS
Sbjct: 262 VEFLS 266
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 263 KTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 325 QFKTLS 330
Q K LS
Sbjct: 322 QIKLLS 327
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AERVRR RISERM+ L+ LVP +K T A MLD ++Y++ LQ
Sbjct: 150 VRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 74 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 133
Query: 326 FKTLS 330
+ LS
Sbjct: 134 VEFLS 138
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK TA +LD +++++ LQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 262 RQVEMLS 268
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK TA +LD +++++ LQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 262 RQVEMLS 268
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 264 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 322
Query: 325 QFKTLS 330
Q K LS
Sbjct: 323 QIKLLS 328
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 326 FKTLS 330
+ LS
Sbjct: 196 VEFLS 200
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 259 QDSVPCK--------IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
Q + PC+ +RA+RG AT S+AER RR +ISERM+ LQ+L P +K A
Sbjct: 99 QSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKAL 158
Query: 311 MLDLAVDYIKDLQNQFKTLS 330
+LD ++YI+ LQ Q + LS
Sbjct: 159 VLDEIINYIQSLQRQVEFLS 178
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 325 QFKTLS 330
Q K LS
Sbjct: 324 QIKLLS 329
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK TA +LD +++++ LQ
Sbjct: 198 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 257
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 258 RQVEMLS 264
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 171 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 230
Query: 326 FKTLS 330
+ LS
Sbjct: 231 VEFLS 235
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQ 65
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 262 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 320
Query: 325 QFKTLS 330
Q K LS
Sbjct: 321 QIKLLS 326
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 47 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 106
Query: 326 FKTLS 330
+ LS
Sbjct: 107 VEFLS 111
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 187
Query: 326 FKTLS 330
+ LS
Sbjct: 188 VEFLS 192
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K A +LD ++YI+ LQ Q
Sbjct: 123 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 182
Query: 326 FKTLS 330
+ LS
Sbjct: 183 VEFLS 187
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K A +LD ++YI+ LQ+Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 326 FKTL 329
+ L
Sbjct: 160 VEFL 163
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ L +Q
Sbjct: 112 VRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQ 171
Query: 326 FKTLS 330
+ LS
Sbjct: 172 VEFLS 176
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 325 QFKTLS 330
Q K LS
Sbjct: 324 QIKLLS 329
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 263 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 321
Query: 325 QFKTLS 330
Q K LS
Sbjct: 322 QIKLLS 327
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA RVRR RISER++ LQ L+PN DK + ML+ A+ Y++ L+
Sbjct: 47 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLEL 105
Query: 325 QFKTLSDN 332
Q K L ++
Sbjct: 106 QIKMLKND 113
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K A +LD ++YI+ LQ Q
Sbjct: 50 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 109
Query: 326 FKTLS 330
+ LS
Sbjct: 110 VEFLS 114
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ
Sbjct: 126 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQ 185
Query: 324 NQFKTL 329
+Q + +
Sbjct: 186 HQVEFM 191
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 258 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 316
Query: 325 QFKTLS 330
Q K LS
Sbjct: 317 QIKLLS 322
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R +RG AT S+AER RR +I+ RM+ LQELVP DK + TA +LD +++++ LQ Q
Sbjct: 200 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 259
Query: 326 FKTLS 330
+ LS
Sbjct: 260 VEILS 264
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ++VP +K A +LD ++YI+ LQ Q
Sbjct: 137 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQ 196
Query: 326 FKTLS 330
+ LS
Sbjct: 197 VEFLS 201
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 326 FKTLS 330
+ LS
Sbjct: 185 VEFLS 189
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 326 FKTLS 330
+ LS
Sbjct: 185 VEFLS 189
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 260 DSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
D +P +RA+RG AT S+AER RR +I+ RM+ LQELVP DK T +LD +++
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINH 237
Query: 319 IKDLQNQFKTLS 330
++ LQ Q + LS
Sbjct: 238 VQTLQRQVEMLS 249
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 137 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 196
Query: 326 FKTLS 330
+ LS
Sbjct: 197 VEFLS 201
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHISTMLEEAVQYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 218 SWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPR 277
S N + +ES + +K G G+ S E ++ + +RA+RG AT
Sbjct: 115 SANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVH--------VRARRGQATDSH 166
Query: 278 SIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
S+AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQ+Q + LS
Sbjct: 167 SLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLS 219
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 260 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 318
Query: 325 QFKTLS 330
Q K LS
Sbjct: 319 QIKLLS 324
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 218 SWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPR 277
S N + +ES + +K G G+ S E ++ + +RA+RG AT
Sbjct: 116 SANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVH--------VRARRGQATDSH 167
Query: 278 SIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
S+AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQ+Q + LS
Sbjct: 168 SLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLS 220
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ RM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 326 FKTLS 330
+ LS
Sbjct: 214 VEFLS 218
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++Y++ LQ Q
Sbjct: 99 VRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQ 158
Query: 326 FKTLS 330
+ LS
Sbjct: 159 VEFLS 163
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R +RG AT S+AER RR +I+ RM+ LQELVP DK + TA +LD +++++ LQ Q
Sbjct: 206 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 265
Query: 326 FKTLS 330
+ LS
Sbjct: 266 VEILS 270
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 325 QFKTLS 330
Q K LS
Sbjct: 345 QIKLLS 350
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 325 QFKTLS 330
Q K LS
Sbjct: 345 QIKLLS 350
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM+ LQ+L+P +K A +LD ++YI+ LQ Q
Sbjct: 140 VRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQ 199
Query: 326 FKTLS 330
+ LS
Sbjct: 200 VEFLS 204
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 253 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 311
Query: 325 QFKTLS 330
Q K LS
Sbjct: 312 QIKLLS 317
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 218 SWNDSSHFTESFTDMKREQGNGE-LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHP 276
S N + +ES K G G+ + N+ + E A E +RA+ G AT
Sbjct: 113 SVNSTPKVSESGNKFKHSSGRGKRVKNNVTEEEKAKEV---------VNVRARSGQATDS 163
Query: 277 RSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
R++AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQNQ + LS
Sbjct: 164 RNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLS 217
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 312
Query: 325 QFKTLS 330
Q K LS
Sbjct: 313 QIKLLS 318
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT SIAERVRR +I+ ++R LQ+LVP + A ML+ ++Y+ LQNQ
Sbjct: 148 VRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQ 207
Query: 326 FKTLS 330
+ LS
Sbjct: 208 VEFLS 212
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQ+Q
Sbjct: 133 VRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 192
Query: 326 FKTLS 330
+ LS
Sbjct: 193 VEFLS 197
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+ +M+ LQ+LVP +K A MLD ++Y++ LQ Q
Sbjct: 68 VRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQ 127
Query: 326 FKTLS 330
+ LS
Sbjct: 128 VEFLS 132
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+ AT+ SIAE++RR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ
Sbjct: 146 VHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 205
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 206 RQVEFLS 212
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT+ S+AER RR +I+ RM+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 326 FKTLS 330
+ LS
Sbjct: 214 VEFLS 218
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA +G AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 223 KTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 325 QFKTLS 330
Q K LS
Sbjct: 282 QIKLLS 287
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA R RR RIS+R++ LQELVPN K + ML+ A++Y+K LQ
Sbjct: 357 KPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQL 415
Query: 325 QFKTLSDN 332
Q K L+ +
Sbjct: 416 QVKVLTSD 423
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 92 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 150
Query: 325 QFKTLS 330
Q K LS
Sbjct: 151 QIKLLS 156
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISERM LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 84 VRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQ 143
Query: 326 FKTLS 330
+ LS
Sbjct: 144 VEFLS 148
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RAKRG AT S+AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQ+Q
Sbjct: 127 VRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 186
Query: 326 FKTLS 330
+ LS
Sbjct: 187 VEFLS 191
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ++VP K T A MLD ++Y++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQ 200
Query: 326 FKTLS 330
+ LS
Sbjct: 201 VEFLS 205
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 257 QFQDSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLA 315
Q ++ +P +RA+RG AT S+AER RR +I++RM+ LQELVP +K + TA +LD
Sbjct: 172 QEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEI 231
Query: 316 VDYIKDLQNQFKTLS 330
+++++ LQ Q + LS
Sbjct: 232 INHVQFLQRQVEILS 246
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 241 LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 300
L NS+ E A+V SV K RA +G AT P+S+ R RR +I+ER++ LQ LVP
Sbjct: 149 LSNSSDDEKASVT-------SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 301 NMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
N K + + ML+ AV Y+K LQ Q K LS
Sbjct: 202 NGTK-VDISTMLEEAVHYVKFLQLQIKLLS 230
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 325 QFKTLSDNR 333
Q K LS +
Sbjct: 274 QIKLLSSDE 282
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+R +RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD +++++ LQ
Sbjct: 186 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 245
Query: 324 NQFKTLS 330
N+ + LS
Sbjct: 246 NEVEILS 252
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RAKRG AT P+S+ R RR +I+ER++ LQ LVPN K + MLD A+ Y+K LQ
Sbjct: 441 KPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQT 499
Query: 325 QFKTL 329
Q + L
Sbjct: 500 QVELL 504
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ Q
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 246
Query: 327 KTLS 330
K LS
Sbjct: 247 KLLS 250
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ Q
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 246
Query: 327 KTLS 330
K LS
Sbjct: 247 KLLS 250
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 183 KSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 241
Query: 325 QFKTLS 330
Q K LS
Sbjct: 242 QIKLLS 247
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R +RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD +++++ LQN+
Sbjct: 192 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNE 251
Query: 326 FKTLS 330
+ LS
Sbjct: 252 VEILS 256
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD +++++ LQ Q
Sbjct: 201 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQ 260
Query: 326 FKTLS 330
+ LS
Sbjct: 261 VEFLS 265
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 246 KPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDISTMLEEAVQYVKFLQL 304
Query: 325 QFKTLS 330
Q K LS
Sbjct: 305 QIKLLS 310
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 241 LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 300
L NS+ E A+V SV K RA +G AT P+S+ R RR +I+ER++ LQ LVP
Sbjct: 149 LSNSSDDEKASVT-------SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 301 NMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
N K + + ML+ AV Y+K LQ Q K LS
Sbjct: 202 NGTK-VDISTMLEEAVHYVKFLQLQIKLLS 230
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS++M+ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 37 VRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 96
Query: 326 FKTLS 330
+ +S
Sbjct: 97 VEFIS 101
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA++G AT S+ ERVRR +ISERM+ LQ LVP +K T A MLD ++Y++ LQ Q
Sbjct: 132 VRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQ 191
Query: 326 FKT 328
+
Sbjct: 192 VEV 194
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ERM+ LQ+LVP +K A +LD ++Y++ L+ Q
Sbjct: 114 VRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQ 173
Query: 326 FKTLS 330
+ LS
Sbjct: 174 VEFLS 178
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+E++R LQ +VP K A MLD ++Y++ LQ+Q
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEFLS 221
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV+Y+K LQ
Sbjct: 273 KTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQT 331
Query: 325 QFKTLS 330
Q K +
Sbjct: 332 QIKVCT 337
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G PR +R+RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS
Sbjct: 143 GGTAPPRQ--QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLS 199
Query: 331 DNR 333
+R
Sbjct: 200 MSR 202
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +IS RM+ LQ LVP + T A ML+ ++Y+K LQ Q
Sbjct: 150 VRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 209
Query: 326 FKTLS 330
+ LS
Sbjct: 210 IEFLS 214
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 263 PCKIRA----KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
P RA KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + +S
Sbjct: 367 LKTLQLQVQIMS 378
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 263 PCKIRA----KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
P RA KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + +S
Sbjct: 367 LKTLQLQVQIMS 378
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 236 KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 325 QFKTLS 330
Q K LS
Sbjct: 295 QIKLLS 300
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 263 PCKIRA----KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
P RA KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + +S
Sbjct: 367 LKTLQLQVQIMS 378
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 263 PCKIRA----KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
P RA KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + +S
Sbjct: 367 LKTLQLQVQIMS 378
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 263 PCKIRA----KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
P RA KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + +S
Sbjct: 367 LKTLQLQVQIMS 378
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG +T P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 214 KARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQL 272
Query: 325 QFKTLS 330
Q K LS
Sbjct: 273 QIKVLS 278
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD + +++ LQ Q
Sbjct: 197 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQ 256
Query: 326 FKTLS 330
+ LS
Sbjct: 257 VEFLS 261
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RAKRG AT P+S+ R RR RI+ER++ LQ LVPN K + ML+ A+ Y+K LQ
Sbjct: 210 KPRAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQL 268
Query: 325 QFKTLS 330
Q LS
Sbjct: 269 QVNMLS 274
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R +RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD +++++ LQ++
Sbjct: 160 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHE 219
Query: 326 FKTLS 330
+ LS
Sbjct: 220 VEILS 224
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
++A+RG A + S+AERVRR +ISERM+ LQ+LVP + T +LD ++Y++ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 326 FKTLS 330
+ LS
Sbjct: 265 VELLS 269
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR +I+E+++ LQ +VP K A MLD ++Y++ LQ+Q
Sbjct: 152 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 211
Query: 326 FKTLS 330
+ LS
Sbjct: 212 VEFLS 216
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 242 GNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 301
N+ AE ++ QD + +R++RG AT S+AER RR RI ERM+ LQ+LVP
Sbjct: 121 ANNKPAEPSSKPSEPPMQDYI--HVRSRRGQATDSHSLAERARRERIGERMKILQDLVPG 178
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+K A LD ++YI+ LQ Q + LS
Sbjct: 179 CNKVIGKALALDEIINYIQSLQCQVEFLS 207
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+R +RG AT S+AER RR +I+ RM+ LQELVP +K + TA +LD +++++ LQ Q
Sbjct: 173 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQ 232
Query: 326 FKTLS 330
+ LS
Sbjct: 233 VEILS 237
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT S+AE VR +I +RM+ LQ+LVP K T DMLD ++Y++ LQ
Sbjct: 10 RVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQSLQC 69
Query: 325 QFKTLS 330
Q ++LS
Sbjct: 70 QAESLS 75
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR +I+ER+R LQ LVPN K + + ML+ A+ Y+K LQ
Sbjct: 183 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 241
Query: 325 QFKTLS 330
Q K LS
Sbjct: 242 QIKLLS 247
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR +I+ER+R LQ LVPN K + + ML+ A+ Y+K LQ
Sbjct: 197 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 255
Query: 325 QFKTLS 330
Q K LS
Sbjct: 256 QIKLLS 261
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA+RG AT ++AERVRR +I+E++R LQ +VP K + A MLD ++Y++ LQ+Q
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 327 KTLS 330
+ LS
Sbjct: 212 EFLS 215
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RAKRG AT P+SI R RR RI+ER+R LQ LVPN K + ML+ A++Y+K LQ
Sbjct: 236 KPRAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFLQL 294
Query: 325 QF 326
Q
Sbjct: 295 QL 296
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + +KR A +++ER RR RI+E+M+ LQEL+PN +K T+ A MLD A++Y+K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 70 QLQLQVLS 77
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
++A+RG A + S+AERVRR +ISERM+ LQ+LVP + T +LD ++Y++ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 326 FKTLS 330
+ LS
Sbjct: 265 VEFLS 269
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P+S+ R RR RI+ER+R LQ+LVPN K + + ML+ A Y+K LQ Q
Sbjct: 191 RASRGAATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAAQYVKFLQLQI 249
Query: 327 KTLS 330
K LS
Sbjct: 250 KLLS 253
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 153 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 211
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 212 QVKVLSMSR 220
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R++RG AT P+SI R RR +I+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 245 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 303
Query: 325 QFKTLS 330
Q K LS
Sbjct: 304 QIKLLS 309
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA G AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 263 KSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 325 QFKTLS 330
Q K LS
Sbjct: 322 QIKLLS 327
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + +KR A +++ER RR RI+E+M+ LQEL+PN +K T+ A MLD A++Y+K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 70 QLQLQVLS 77
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISE+M LQ+++P +K A +LD ++YI+ LQ Q
Sbjct: 154 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 213
Query: 326 FKTLS 330
+ LS
Sbjct: 214 VEFLS 218
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +ISE+M LQ+++P +K A +LD ++YI+ LQ Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 326 FKTLS 330
+ LS
Sbjct: 213 VEFLS 217
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT+ S+AER RR +IS RM+ LQ LVP + T A ML+ ++Y+K LQ Q
Sbjct: 19 VRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 78
Query: 326 FKTLS 330
+ LS
Sbjct: 79 IEFLS 83
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA++G A P+SIA R RR RIS+R++ LQELVPN K + ML+ A++Y+K LQ
Sbjct: 357 KPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQL 415
Query: 325 QFKT 328
Q K
Sbjct: 416 QVKV 419
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 219 WNDSSHFTESFTDMKREQGNGELG-NSTSAEMAAVEKFLQFQDSVPCK-------IRAKR 270
W H + + +KRE +L NS+ + A + + Q VP + +RA+R
Sbjct: 107 WQLRKHSSPAI-KVKRESKRQKLNLNSSVSRNAKRVRPAKKQKKVPVEPPTGYVHVRARR 165
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
G AT S+AERVRR +IS RM+ LQ LVP DK T A +LD + Y++ L+++ +
Sbjct: 166 GEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQV 223
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ A Y+K LQ Q
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 253
Query: 327 KTLS 330
K LS
Sbjct: 254 KLLS 257
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP + K T+ A M+D VDY
Sbjct: 143 QSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDY 201
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 202 VKFLRLQVKVLSMSR 216
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 23/82 (28%)
Query: 274 THPRSIAERV----------------------RRTRISERMRKLQELVPNMDKQTNTADM 311
T P SIAERV RR RI+ERM+ LQELVPN +K T+ A M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 312 LDLAVDYIKDLQNQFKTLSDNR 333
LD +DY+K LQ Q K LS +R
Sbjct: 278 LDEIIDYVKFLQLQVKVLSMSR 299
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 253 EKFLQFQDSVPCK--IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
E+ + + S P K +KR A +++ER RR RI+E+MR LQEL+PN +K + A
Sbjct: 305 EESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 363
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKC 336
MLD A++Y+K LQ Q + +S C
Sbjct: 364 MLDEAIEYLKTLQLQVQIMSMGTGLC 389
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 185 QVKVLSMSR 193
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 23/82 (28%)
Query: 274 THPRSIAERV----------------------RRTRISERMRKLQELVPNMDKQTNTADM 311
T P SIAERV RR RI+ERM+ LQELVPN +K T+ A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 312 LDLAVDYIKDLQNQFKTLSDNR 333
LD +DY+K LQ Q K LS +R
Sbjct: 279 LDEIIDYVKFLQLQVKVLSMSR 300
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 134 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 192
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 193 QVKVLSMSR 201
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 180
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 181 QVKVLSMSR 189
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM+ L+ELVP DK TA +LD +++++ LQ Q
Sbjct: 33 VRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQ 92
Query: 326 FKTLS 330
+ LS
Sbjct: 93 VEMLS 97
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 119 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 177
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 178 QVKVLSMSR 186
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 253 EKFLQFQDSVPCK--IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
E+ + + S P K +KR A +++ER RR RI+E+MR LQEL+PN +K + A
Sbjct: 426 EESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 484
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKC 336
MLD A++Y+K LQ Q + +S C
Sbjct: 485 MLDEAIEYLKTLQLQVQIMSMGTGLC 510
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 253 EKFLQFQDSVPCK--IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
E+ + + S P K +KR A +++ER RR RI+E+MR LQEL+PN +K + A
Sbjct: 441 EESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 499
Query: 311 MLDLAVDYIKDLQNQFKTLSDNRAKC 336
MLD A++Y+K LQ Q + +S C
Sbjct: 500 MLDEAIEYLKTLQLQVQIMSMGTGLC 525
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA+RG AT P+S+ R RR +I+ER++ LQ LVPN K + MLD A+ Y++ LQ
Sbjct: 441 KPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQL 499
Query: 325 QFKTL 329
Q L
Sbjct: 500 QVTLL 504
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 188 QVKVLSMSR 196
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRL 180
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 181 QVKVLSMSR 189
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 23/82 (28%)
Query: 274 THPRSIAERV----------------------RRTRISERMRKLQELVPNMDKQTNTADM 311
T P SIAERV RR RI+ERM+ LQELVPN +K T+ A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 312 LDLAVDYIKDLQNQFKTLSDNR 333
LD +DY+K LQ Q K LS +R
Sbjct: 279 LDEIIDYVKFLQLQVKVLSMSR 300
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 241 LGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 300
L NS+ E A+V SV K RA +G AT P+S+ R RR +I+ER++ LQ LVP
Sbjct: 149 LSNSSDDEKASVT-------SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 301 NMDKQTNTADMLDLAVDYIKDLQNQFKT 328
N K + + ML+ AV Y+K LQ Q K
Sbjct: 202 NGTK-VDISTMLEEAVHYVKFLQLQIKV 228
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 188 QVKVLSMSR 196
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 136 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 194
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 195 QVKVLSMSR 203
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RAKRG AT P+S+ R RR +I+ER++ LQ LVPN +Q + ML+ A+ ++K L+ Q
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPN-GEQVDIVTMLEEAIHFVKFLEFQL 529
Query: 327 KTL-SDNR 333
+ L SD+R
Sbjct: 530 ELLRSDDR 537
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
C AKR +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ
Sbjct: 376 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 434
Query: 324 NQFKTLSDNRAKCKCSKIQKPVENQI 349
Q + +S C + P +
Sbjct: 435 LQVQMMSMGSGLCIPPMLLPPAMQHL 460
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+ LQ
Sbjct: 271 KTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQL 329
Query: 325 QFKTLS 330
Q K LS
Sbjct: 330 QIKLLS 335
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 14/79 (17%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK--------------QTNTADM 311
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A M
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVM 204
Query: 312 LDLAVDYIKDLQNQFKTLS 330
LD ++Y++ LQ Q + LS
Sbjct: 205 LDEIINYVQSLQRQVEFLS 223
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM+ LQELVP K + TA +LD +++++ LQ +
Sbjct: 7 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQRE 66
Query: 326 FKTLS 330
+ LS
Sbjct: 67 VEFLS 71
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 325 QFKTLSDNR 333
Q K LS +R
Sbjct: 196 QVKILSMSR 204
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY
Sbjct: 141 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDY 199
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 200 VKFLRLQVKVLSMSR 214
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R+ RG AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 223 KSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 325 QFKTLS 330
Q K LS
Sbjct: 282 QIKLLS 287
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 239
Query: 326 FKTLS 330
+ LS
Sbjct: 240 VEYLS 244
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ
Sbjct: 105 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 164
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 165 RQVEYLS 171
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 200 FLRLQVKVLSMSR 212
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 216
Query: 326 FKTLS 330
+ LS
Sbjct: 217 VEYLS 221
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ Q
Sbjct: 80 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 139
Query: 326 FKTLS 330
+ LS
Sbjct: 140 VEYLS 144
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AERVRR RIS +M+ LQ LVP D+ T A +LD + Y++ L+++
Sbjct: 77 VRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDR 136
Query: 326 FKTL 329
+L
Sbjct: 137 IGSL 140
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + + ML+ A Y+K LQ Q
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 255
Query: 327 KTLSDN 332
K LS +
Sbjct: 256 KLLSSD 261
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ Q
Sbjct: 193 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 252
Query: 326 FKTLS 330
+ LS
Sbjct: 253 VEYLS 257
>gi|226505756|ref|NP_001145730.1| uncharacterized protein LOC100279237 [Zea mays]
gi|219884203|gb|ACL52476.1| unknown [Zea mays]
Length = 304
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 119 SNLVRQSSSPAGLFAKLSAQNGY-----ASTKEVGSYGGVNGSNGDLSPSTKRLKSQISI 173
S+L+RQSSSPAG NGY AS GG + S + RL Q+S
Sbjct: 131 SSLIRQSSSPAGFLDHFGMDNGYGAMLRASMGMGFQDGGASDSLAGGGGGSGRLGGQLSF 190
Query: 174 PSRIPSSLGMLSRVSEVESDGPTHGKVR--NGNGDTQFYSTGFSYGSWNDSSHFTESFTD 231
SR S ++S++SE++S G G G Y G+ S + D
Sbjct: 191 SSRQGS---LMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWDDSSSALLPD 247
Query: 232 M-----KR-----EQGNG-----ELGNSTSAEMAAVEKFLQFQDSVPCKIRA 268
KR E G G L ++S+E+AA+EKFLQFQD+VPCK+RA
Sbjct: 248 SLPATNKRPRDSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQFQDAVPCKVRA 299
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY
Sbjct: 137 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 195
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 196 VKFLRLQVKVLSMSR 210
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 519
Query: 328 TLS 330
+S
Sbjct: 520 IMS 522
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 489
Query: 328 TLS 330
+S
Sbjct: 490 IMS 492
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
C AKR +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ
Sbjct: 173 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 231
Query: 324 NQFKTLSDNRAKCKCSKIQKPVENQI 349
Q + +S C + P +
Sbjct: 232 LQVQMMSMGSGLCIPPMLLPPAMQHL 257
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 425
Query: 328 TLS 330
+S
Sbjct: 426 IMS 428
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 236 QGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKL 295
+G+ GNS S MA E + + R +RG AT P+S+ R RR +I+ER+RKL
Sbjct: 419 RGSSCPGNSVSQMMAIYEFGPALNRN--GRPRVQRGSATDPQSVHARARREKIAERLRKL 476
Query: 296 QELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
Q L+PN K + MLD AV Y++ L+ Q
Sbjct: 477 QHLIPNGGK-VDIVTMLDEAVHYVQFLKRQV 506
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY
Sbjct: 132 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 190
Query: 319 IKDLQNQFKTLSDNR 333
+K L+ Q K LS +R
Sbjct: 191 VKFLRLQVKVLSMSR 205
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y+K L
Sbjct: 37 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQL 95
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 96 QLQVQMLS 103
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTN-----TADMLDLAVDYIK 320
+RA+RG AT SIAERVRR +I R+R LQ+LVP K + A MLD ++Y+
Sbjct: 148 VRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINYVH 207
Query: 321 DLQNQFKTLSDNRA 334
LQNQ + LS A
Sbjct: 208 SLQNQVEFLSRELA 221
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 260 DSVP-CKIRAKRGCATHPRSIAERV--------RRTRISERMRKLQELVPNMDKQTNTAD 310
D +P +RA+RG AT S+AERV RR +I+ RM+ LQELVP DK TA
Sbjct: 122 DKLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTAL 181
Query: 311 MLDLAVDYIKDLQNQFKTLS 330
+LD +++++ LQ Q + LS
Sbjct: 182 VLDEIINHVQTLQRQVEMLS 201
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 509
Query: 328 TLS 330
+S
Sbjct: 510 MMS 512
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
+ P K + K A P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K
Sbjct: 176 AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVK 234
Query: 321 DLQNQFKTLS 330
LQ Q K L+
Sbjct: 235 FLQLQVKILA 244
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA RG AT P+S+ R RR RI+ER++ LQ +VPN K + + ML+ AV Y+K LQ
Sbjct: 269 KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDISTMLEEAVHYVKFLQL 327
Query: 325 QFKT 328
Q K
Sbjct: 328 QIKV 331
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 16/81 (19%)
Query: 266 IRAKRGCATHPRSIAERV----------------RRTRISERMRKLQELVPNMDKQTNTA 309
+RA+RG AT SIAERV RR +ISERM+ LQ+LVP +K A
Sbjct: 124 VRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKA 183
Query: 310 DMLDLAVDYIKDLQNQFKTLS 330
+LD ++YI+ LQ+Q + LS
Sbjct: 184 LVLDEIINYIQSLQHQVEFLS 204
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A M+D VDY+K
Sbjct: 78 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 136
Query: 321 DLQNQFKTLSDNR 333
L+ Q K LS +R
Sbjct: 137 FLRLQVKVLSMSR 149
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 511
Query: 328 TLS 330
+S
Sbjct: 512 IMS 514
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 264 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ
Sbjct: 144 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 203
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 204 RQVEYLS 210
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y
Sbjct: 41 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 99
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + LS
Sbjct: 100 LKQLQLQVQMLS 111
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R + G AT P+SIA R RR + ++R+R LQ LVPN ++ +T ML +Y++ LQ+
Sbjct: 674 KQRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGER-LDTVHMLSQTFEYVRFLQH 732
Query: 325 QFKTLSDNR---AKCKCSKIQKPVE 346
+ L +N+ ++ KC K ++ V+
Sbjct: 733 KVWDLYNNKDSISEVKCEKWKEFVD 757
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y+K L
Sbjct: 38 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 96
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 97 QLQVQMLS 104
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y
Sbjct: 41 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 99
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + LS
Sbjct: 100 LKQLQLQVQMLS 111
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y+K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 95 QLQVQMLS 102
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y+K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 323 QNQFKTLS 330
Q Q + LS
Sbjct: 95 QLQVQMLS 102
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y
Sbjct: 19 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 77
Query: 319 IKDLQNQFKTLS 330
+K LQ Q + LS
Sbjct: 78 LKQLQLQVQMLS 89
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+MR LQELVP+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 328 TL 329
+
Sbjct: 292 VM 293
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522
Query: 328 TLS 330
+S
Sbjct: 523 MMS 525
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 328 TLS 330
+S
Sbjct: 517 IMS 519
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
+RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ K +A RG A+ P+S+ R RR RI++R++ LQ LVPN K + + ML+ AV Y+K
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 321 DLQNQFKTLS 330
LQ Q K LS
Sbjct: 186 FLQLQIKLLS 195
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A + +ER RR RI+E+MR LQEL+PN +K T+ A MLD A+DY+K LQ Q +
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQM 789
Query: 329 LS 330
+S
Sbjct: 790 MS 791
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 329 LSDNRAKCKCSKIQKPVENQI 349
+S C + P +
Sbjct: 461 MSMGTGLCIPPMLLPPAMQHL 481
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 233 KREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKI-RAKRGCATHPRSIAERVRRTRISER 291
KR E + + +E A E + P K+ A+R A +++ER RR RI+E+
Sbjct: 226 KRLDSRTEDYSESPSEDAESESLALIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEK 285
Query: 292 MRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
M+ LQEL+P+ +K T+ A MLD A++Y+K LQ Q + +
Sbjct: 286 MKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMM 322
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 369
Query: 328 TL 329
+
Sbjct: 370 MM 371
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNR 333
++RR RI+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS +R
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 190
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+ERM+ LQEL+PN +K T+ A MLD A++Y+K LQ+Q +
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 328 TL 329
+
Sbjct: 63 VV 64
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 328 TL 329
+
Sbjct: 388 MM 389
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 263 PCKIR-AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
P K+ A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K
Sbjct: 289 PAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKS 347
Query: 322 LQNQFKTL 329
LQ Q + +
Sbjct: 348 LQLQLQMM 355
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 328 TL 329
+
Sbjct: 388 MM 389
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 230 TDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
TD+ E G S EM+ P + KR A +++E+ RR+RI+
Sbjct: 151 TDLDDLDCESEEGQEPSEEMSK---------PAPSRSSTKRSRAAEVHNLSEKRRRSRIN 201
Query: 290 ERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 202 EKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 241
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K +A +G AT P+S+ R RR RI +R+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 239 KTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 297
Query: 325 QFKTLS 330
Q K LS
Sbjct: 298 QNKLLS 303
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 328 TL 329
+
Sbjct: 373 MM 374
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
+ P + +KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K
Sbjct: 128 AAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLK 186
Query: 321 DLQNQFKTLS 330
LQ Q + LS
Sbjct: 187 QLQLQVQMLS 196
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 328 TL 329
+
Sbjct: 373 MM 374
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 282 RVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
+VRR RISERMR LQ LVP DK T A +LD ++Y++ LQNQ + LS
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 125
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 302
N+ EMA+ + ++ +P K+ S++ER RR +I+++MR LQ L+PN
Sbjct: 351 NAHLKEMASPSENADEEEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNS 410
Query: 303 DKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQKPVENQIV 350
DK + A MLD A++Y+K LQ Q + +S R C + P Q +
Sbjct: 411 DK-VDKASMLDKAIEYLKTLQLQLQMMS-MRGSCYMPPMMIPTALQQI 456
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR ++ +++ER RR RI+E+MR LQELVP +KQ + A ML+ ++Y+K LQ Q +
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 329 LS 330
+S
Sbjct: 277 MS 278
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R+ R H +++ER RR +I+E++R L+EL+PN +K + A MLD A+DY+K L+ Q
Sbjct: 205 RSYRNAKVH--NLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQL 261
Query: 327 KTLSDNRAKC 336
+ +S RA C
Sbjct: 262 QIMSMGRALC 271
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + +S C
Sbjct: 391 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGTGLC 447
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 328 TLS 330
+S
Sbjct: 398 IMS 400
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R+ R H +++ER RR +I+E++R L+EL+PN +K + A MLD A+DY+K L+ Q
Sbjct: 205 RSYRNAKVH--NLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQL 261
Query: 327 KTLSDNRAKC 336
+ +S RA C
Sbjct: 262 QIMSMGRALC 271
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 328 TL 329
+
Sbjct: 383 MM 384
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 258 FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVD 317
FQ + K R+ R AT P+S+ + RR RI+ R+R LQ LVPN K + + ML+ AV
Sbjct: 196 FQADLNAKTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVR 254
Query: 318 YIKDLQNQFKTLS 330
Y+K LQ Q K LS
Sbjct: 255 YVKFLQLQIKLLS 267
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++ER RR RI+ERM+ LQEL+PN +K T+ A MLD A++Y+K LQ+Q +
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 328 TL 329
+
Sbjct: 63 VV 64
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + +S C
Sbjct: 319 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGTGLC 375
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R A +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 328 TL 329
+
Sbjct: 91 MM 92
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA R T P+SI R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 225 KGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 283
Query: 325 QFKTLS 330
Q + LS
Sbjct: 284 QIRLLS 289
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R + G AT P+SIA R RR + ++R+R LQ LVPN ++ +T ML +Y++ LQ+
Sbjct: 673 KQRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGER-LDTVHMLSQTFEYVRFLQH 731
Query: 325 QFKTLSDNR---AKCKCSKIQKPVE 346
+ L +N+ ++ KC K ++ ++
Sbjct: 732 KVWDLYNNKDSMSEVKCEKWKEFID 756
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 395
Query: 328 TLS 330
+S
Sbjct: 396 IMS 398
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + +S C
Sbjct: 447 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGTGLC 503
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 260 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYI 319
D++ K +A R AT +S+ R RR RI+ER+R LQ LVPN K + + ML+ AV+Y+
Sbjct: 204 DNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVEYV 262
Query: 320 KDLQNQFKTLS 330
K LQ Q K LS
Sbjct: 263 KFLQLQIKLLS 273
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 217 PQSLAAKNRRERISERLRTLQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 272
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 256 LQFQDSVPCKIRA--KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
L+ ++ VP + A KR AT +++ER RR RI+++MR LQ+L+PN +K + A ML
Sbjct: 363 LEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLG 421
Query: 314 LAVDYIKDLQNQFKTLSDNRAKC 336
A+DY+K LQ Q + +S C
Sbjct: 422 EAIDYLKSLQLQVQMMSMGTRLC 444
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A + +ER RR RI+E+MR LQEL+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQM 650
Query: 329 LS 330
+S
Sbjct: 651 MS 652
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S P R R H + +ER RR RI+E++R LQEL+PN K T+ MLD A+DY+K
Sbjct: 11 STPAPTRRSRSADFH--NFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLK 67
Query: 321 DLQNQFKTL 329
LQ Q + L
Sbjct: 68 SLQLQLQML 76
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 256 LQFQDSVPCKIRA--KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 313
L+ ++ VP + A KR AT +++ER RR RI+++MR LQ+L+PN +K + A ML
Sbjct: 357 LEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLG 415
Query: 314 LAVDYIKDLQNQFKTLSDNRAKC 336
A+DY+K LQ Q + +S C
Sbjct: 416 EAIDYLKSLQLQVQMMSMGTRLC 438
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + +S C
Sbjct: 459 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGTGLC 515
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 210 YSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAK 269
YST FS +++ F S ++++ E+ + T +AA++ +SV R
Sbjct: 110 YSTPFS-----NANSFLSS---IEKKNPTAEIRDMT-FRIAAMQPIHIDPESVKPPKRRN 160
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+S+A R RR RISERMR LQ LVP K +TA MLD A+ Y+K L+ Q ++L
Sbjct: 161 VKISKDPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSL 219
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 249 MAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT 308
+AA++ +SV R + P+SIA R RR RISE++R LQ +VP K +T
Sbjct: 154 IAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKM-DT 212
Query: 309 ADMLDLAVDYIKDLQNQFKTLSD 331
A MLD A+ Y+K L+ Q K+L +
Sbjct: 213 ASMLDEAIHYVKFLKTQLKSLQE 235
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R KR A +++ER RR RI+E+MR LQEL+PN +K T+ A MLD A++Y+K LQ Q
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 327 KT 328
+
Sbjct: 71 QV 72
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + S++E+ RR RI+++MR LQEL+PN K+ + +LD A+DY+K LQ Q +
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQ 437
Query: 328 TLSDNRAKCKCSKIQKPVENQI 349
+S C + V QI
Sbjct: 438 VMSMGAGMCMAPVMIPAVLQQI 459
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 328 TLS 330
+S
Sbjct: 398 IMS 400
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ+LVP K +TA MLD A Y+K L++Q + L
Sbjct: 296 PQTVAARLRRERVSERLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 348
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
+ P + +KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K
Sbjct: 150 AAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLK 208
Query: 321 DLQNQFKTLS 330
LQ Q + LS
Sbjct: 209 QLQLQVQMLS 218
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 278 SIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCK 337
S++E+ RR RI+++MR LQEL+PN K+ + +LD A+DY+K LQ Q + +S C
Sbjct: 20 SLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQVMSMGAGMCM 78
Query: 338 CSKIQKPVENQI 349
+ V QI
Sbjct: 79 APVMIPAVLQQI 90
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 204 PQSLAAKNRRERISERLRALQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 259
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 259 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDY 318
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L+PN K T+ A MLD A++Y
Sbjct: 19 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 77
Query: 319 IKDLQNQFKTL 329
+K LQ Q + +
Sbjct: 78 LKQLQLQVQMI 88
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA A P+S+ R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 263 KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 325 QFKTLS 330
Q K LS
Sbjct: 322 QIKLLS 327
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KRG +++ER RR RI+E+MR LQEL+PN +K + A ML+ A++Y+K LQ Q +
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 329 LSDNRAKCKC 338
+S C
Sbjct: 380 MSTMGTAGMC 389
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ+LVP K +TA MLD A Y+K L++Q + L
Sbjct: 295 PQTVAARLRRERVSERLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 347
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KRG +++ER RR RI+E+MR LQEL+PN +K + A ML+ A++Y+K LQ Q +
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 329 LSDNRAKCKC 338
+S C
Sbjct: 380 MSTMGTAGMC 389
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 252 VEKFLQFQDSVPC-KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 310
VEK ++ VP + +KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A
Sbjct: 104 VEKSVEASKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKAS 162
Query: 311 MLDLAVDYIKDLQNQFKTL 329
MLD A++Y+K LQ Q + L
Sbjct: 163 MLDEAIEYLKQLQLQVQYL 181
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 328 TL 329
+
Sbjct: 324 MM 325
>gi|255647793|gb|ACU24357.1| unknown [Glycine max]
Length = 326
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 132/305 (43%), Gaps = 66/305 (21%)
Query: 1 MDSSTNHNYHQQSNPGLSRFNSAPTALLVNFTDSLES--GGVNKSSF------------- 45
MDS+ + HQQ N GL R+ SAP++LL + ++ + G VN SF
Sbjct: 22 MDSNIGQHCHQQ-NSGLMRYRSAPSSLLTSLVNNNNNNNGYVNGESFRSEHNHHHHQQQQ 80
Query: 46 ----------ESERLISRFMNSGG-------DNSNNSSFQEFEVKSPVSYGNS------Q 82
E E ++++ ++S + + +S Q + + SYG+S
Sbjct: 81 QQHYPPSTSSEMENMLAKLISSNNSEPLQMKEEAGDSVSQPPQQHNGYSYGSSPQMMYQT 140
Query: 83 QSCSGLPPHYPRQSSAMDHNSYDLFLDQSSRVKSVNS------------NLVRQSSSPAG 130
Q GLP P S +++D + + S NS NL+RQ SSPAG
Sbjct: 141 QQIQGLP--IPNGSLGASGSAFDGSFSAVNSLASQNSTQPKMGASTNCNNLIRQKSSPAG 198
Query: 131 LFAKLSAQNGYASTKEVGSYGGVNGSNGDLSPSTKRLKSQISIPSRIPSSLGMLSRVSE- 189
F+ S N A+ ++V S+ G + SNG S+ L ++ R S + +++E
Sbjct: 199 FFSNYSVDN--AALRDVASFRGCDVSNGQAITSSSGLHGTLNFSPRPSSCSTRMPQIAEN 256
Query: 190 ----VESDGPTHGKVRNGN-GDTQFYSTGFSYGSWNDSSHFTESFTDMKREQGNGELGNS 244
VE++ +RN N +T+ Y F+ W+ S +F+ + +GE+ S
Sbjct: 257 GNEDVEANCVESRNLRNDNINNTKCYMPSFTTDFWDGS-----AFSASRTASNSGEISFS 311
Query: 245 TSAEM 249
TS M
Sbjct: 312 TSKAM 316
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A MLD A++Y+K LQ Q
Sbjct: 31 RRSRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQL 87
Query: 327 KTL 329
+ +
Sbjct: 88 QVM 90
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 328 TL 329
+
Sbjct: 324 MM 325
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + ++ C
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMAMGSGLC 415
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KRG +++ER RR RI+E+MR LQEL+PN +K + A ML+ A++Y+K LQ Q +
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 329 LSDNRAKCKC 338
+S C
Sbjct: 384 MSTMGTAGMC 393
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 328 TLS 330
LS
Sbjct: 161 MLS 163
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 328 TLS 330
LS
Sbjct: 81 MLS 83
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 232 MKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISER 291
M+ + G+ + AE+A V ++V + +KR A +++E+ RR+RI+E+
Sbjct: 90 MENDLGDLSCDSEKGAEVAEVPS-----ETVRPRNSSKRSRAAEVHNLSEKRRRSRINEK 144
Query: 292 MRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L+
Sbjct: 145 MKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 182
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 328 TL 329
+
Sbjct: 333 MM 334
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 191 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 246
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 328 TLS 330
LS
Sbjct: 213 MLS 215
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A + RR RISER+R LQELVPN K + ML+ A+ Y+K LQ Q K L+ +
Sbjct: 209 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 264
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 265 KIRAKRGCATHPRSIAERV-------------RRTRISERMRKLQELVPNMDKQTNTADM 311
K RA RG AT P+S+ R+ RR RI+ER+R LQ LVPN K + + M
Sbjct: 236 KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTM 294
Query: 312 LDLAVDYIKDLQNQFKTLS 330
L+ AV Y+K LQ Q K LS
Sbjct: 295 LEEAVQYVKFLQLQIKLLS 313
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK--QTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AER RR +I+ RM+ LQELVP K + TA +LD +++++ LQ
Sbjct: 32 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQ 91
Query: 324 NQFKTLS 330
Q + LS
Sbjct: 92 RQVEFLS 98
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 328 TLS 330
LS
Sbjct: 229 MLS 231
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 329 LS 330
+S
Sbjct: 269 MS 270
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIR------AKRGCATHPRSIAERVRRTRISERMRKLQ 296
N+ SAE +A + L D + R +KR +++ER RR RI+E+MR LQ
Sbjct: 300 NNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQ 359
Query: 297 ELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
EL+PN +K + A ML+ A++Y+K LQ Q + +S
Sbjct: 360 ELIPNCNK-IDKASMLEEAIEYLKTLQLQVQMMS 392
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 217
Query: 329 LS 330
LS
Sbjct: 218 LS 219
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 328 TLS 330
LS
Sbjct: 229 MLS 231
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP + +TA MLD A Y+K L++Q K L
Sbjct: 289 PQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAAGYLKFLKSQVKAL 341
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 329 LS 330
+S
Sbjct: 340 MS 341
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 329 LS 330
+S
Sbjct: 269 MS 270
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R+++G A P+SIA R RR RIS+R++ LQ+LVPN K + ML+ A++Y+K +Q
Sbjct: 232 KPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQL 290
Query: 325 QFK 327
Q +
Sbjct: 291 QLQ 293
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP + +TA MLD A Y+K L++Q K L
Sbjct: 290 PQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAAGYLKFLKSQVKAL 342
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 250 AAVEKFLQFQDSVPCKIRAKRGC----ATHPRSIAERVRRTRISERMRKLQELVPNMDKQ 305
A L DS K++ K C A+ P+ + + RR RI+ER++ LQ LVPN K
Sbjct: 218 AGTSSILNQNDSPDLKLKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK- 276
Query: 306 TNTADMLDLAVDYIKDLQNQFKTLS 330
+ + ML+ AV Y+K LQ Q K LS
Sbjct: 277 VDISTMLEEAVQYVKFLQVQIKLLS 301
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K R+++G A P+SIA R RR RIS+R++ LQ+LVPN K + ML+ A++Y+K +Q
Sbjct: 232 KPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQL 290
Query: 325 QFK 327
Q +
Sbjct: 291 QLQ 293
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+RG AT S+AER RR +I+ RM L+ELVP K + TA +LD +++++ LQ Q +
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 328 TLS 330
LS
Sbjct: 61 YLS 63
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+ +KR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A++Y+K LQ Q
Sbjct: 361 MSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQ 419
Query: 326 FKTLS 330
+ +S
Sbjct: 420 VQMMS 424
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 328 TLS 330
+S
Sbjct: 363 MMS 365
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIR------AKRGCATHPRSIAERVRRTRISERMRKLQ 296
N+ SAE +A + L D + R +KR +++ER RR RI+E+MR LQ
Sbjct: 179 NNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQ 238
Query: 297 ELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
EL+PN +K + A ML+ A++Y+K LQ Q + +S
Sbjct: 239 ELIPNCNK-IDKASMLEEAIEYLKTLQLQVQMMS 271
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 329 LS 330
+S
Sbjct: 340 MS 341
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIR------AKRGCATHPRSIAERVRRTRISERMRKLQ 296
N+ SAE +A + L D + R +KR +++ER RR RI+E+MR LQ
Sbjct: 300 NNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQ 359
Query: 297 ELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
EL+PN +K + A ML+ A++Y+K LQ Q + +S
Sbjct: 360 ELIPNCNK-IDKASMLEEAIEYLKTLQLQVQMMS 392
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP + +TA MLD A Y+K L+ Q K L
Sbjct: 294 PQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAASYLKFLKTQVKAL 346
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 243 NSTSAEMAAVEKFLQFQDSVPCKIR------AKRGCATHPRSIAERVRRTRISERMRKLQ 296
N+ SAE +A + L D + R +KR +++ER RR RI+E+MR LQ
Sbjct: 84 NNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQ 143
Query: 297 ELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
EL+PN +K + A ML+ A++Y+K LQ Q + +S
Sbjct: 144 ELIPNCNK-IDKASMLEEAIEYLKTLQLQVQMMS 176
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A+DY+K LQ Q +
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQM 313
Query: 329 LS 330
+S
Sbjct: 314 MS 315
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKC 336
++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + ++ C
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMAMGSGLC 225
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KRG +++ER RR RI+E+MR LQEL+PN +K + A ML+ A++Y+K LQ Q +
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 329 LS 330
+S
Sbjct: 325 MS 326
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
+ R KR A +++E+ RR +I+E+M+ LQ LVPN K T+ A MLD A++Y+K LQ
Sbjct: 43 RPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQL 101
Query: 325 QFKTLS 330
Q + LS
Sbjct: 102 QVQMLS 107
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S+ K ++ +G A+ P+S+ R RR RI++R++ LQ LVPN K + + ML+ AV Y+K
Sbjct: 128 SLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 186
Query: 321 DLQNQFKTLS 330
LQ Q K LS
Sbjct: 187 FLQLQIKLLS 196
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
KR A +++ER RR RI+ERM+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 328 TLS 330
+S
Sbjct: 348 VMS 350
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 328 TLS 330
+S
Sbjct: 325 MMS 327
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP K +TA MLD A Y+K L++Q + L
Sbjct: 305 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 357
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 16/86 (18%)
Query: 245 TSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 304
TSA AA K F+D P+S+A + RR RISER++ LQELVPN K
Sbjct: 196 TSASKAAKPKLNPFKD---------------PQSVAAKNRRERISERLKILQELVPNGSK 240
Query: 305 QTNTADMLDLAVDYIKDLQNQFKTLS 330
+ ML+ A+ Y+K LQ Q K L+
Sbjct: 241 -VDLVTMLEKAISYVKFLQLQVKVLA 265
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ K T+ A MLD A++Y+K LQ Q
Sbjct: 183 RRSRAAEVH--NLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQL 239
Query: 327 KTL 329
+ +
Sbjct: 240 QVM 242
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G A P+SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 290
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP K +TA MLD A Y+K L++Q + L
Sbjct: 307 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 359
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+T P+++A R RR RISE++R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 336
Query: 333 RAK 335
R K
Sbjct: 337 RPK 339
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P+ +K T+ A MLD A++Y+K LQ Q +
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 250 AAVEKFLQFQDSVPCKIRAKR-GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT 308
AA + + F V K++ K +T P+++A R RR RISE++R LQ+LVP K +T
Sbjct: 315 AAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSK-MDT 373
Query: 309 ADMLDLAVDYIKDLQNQFKTL 329
A MLD A +Y+K L++Q K L
Sbjct: 374 ASMLDEAANYLKFLRSQVKAL 394
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
KRG A +++ER RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q +
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 58
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+T P+++A R RR RISE++R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 333 RAK 335
R K
Sbjct: 335 RPK 337
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP K +TA MLD A Y+K L++Q + L
Sbjct: 235 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 287
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+T P+++A R RR RISE++R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 363
Query: 333 RAK 335
R K
Sbjct: 364 RPK 366
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+MR LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 329 LS 330
+S
Sbjct: 416 MS 417
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 328 TLS 330
LS
Sbjct: 158 MLS 160
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 329 LS 330
LS
Sbjct: 161 LS 162
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+S+R+R LQ+LVP +K +TA MLD A Y+K L++Q + L
Sbjct: 286 PQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKL 338
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S A +VRR RISER++ LQ+LVPN K + ML+ A++Y+K LQ Q K L+
Sbjct: 207 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 261
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A + +ER RR RI+E+MR LQEL+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 328 TLS 330
+
Sbjct: 78 VCA 80
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S A +VRR RISER++ LQ+LVPN K + ML+ A++Y+K LQ Q K L+
Sbjct: 208 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 262
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 90 KRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 329 LS 330
L+
Sbjct: 149 LA 150
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+S+R+R LQ+LVP +K +TA MLD A Y+K L++Q + L
Sbjct: 285 PQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKL 337
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 328 TLS 330
LS
Sbjct: 158 MLS 160
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 261 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIK 320
S P R R H + +ER RR RI+E+++ LQEL+PN K T+ MLD A+DY+K
Sbjct: 10 STPPTTRRSRSAEFH--NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLK 66
Query: 321 DLQNQFKTL 329
LQ Q + L
Sbjct: 67 SLQLQLQML 75
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K + K + P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ
Sbjct: 224 KQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQL 282
Query: 325 QFKTLS 330
Q K L+
Sbjct: 283 QVKVLA 288
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 265 KIRAKRG---CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKD 321
++R KR + P+S+A R RR RIS+R+R LQ VP K +TA MLD A+ Y+K
Sbjct: 378 QLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDEAIHYVKF 436
Query: 322 LQNQFKTL 329
LQ Q +TL
Sbjct: 437 LQQQLQTL 444
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 329 LS 330
L+
Sbjct: 149 LA 150
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K T+ A MLD A++Y+K LQ Q +
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQM 371
Query: 329 LS 330
+S
Sbjct: 372 MS 373
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 329 LS 330
L+
Sbjct: 149 LA 150
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 328 TLS 330
LS
Sbjct: 211 MLS 213
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD A++Y+K LQ Q
Sbjct: 228 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 284
Query: 327 KTL 329
+ +
Sbjct: 285 QIM 287
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD A++Y+K LQ Q
Sbjct: 217 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 273
Query: 327 KTL 329
+ +
Sbjct: 274 QIM 276
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR +++ER RR RI+E+MR LQEL+PN +K + A ML+ A++Y+K LQ Q +
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 328 TLSDNRAKC 336
+S C
Sbjct: 316 MMSMGTGLC 324
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+S+R+R LQ+LVP K +TA MLD A Y+K L++Q + L
Sbjct: 288 PQTVAARLRRERVSDRLRVLQKLVPGGSKM-DTASMLDEAASYLKFLRSQVQAL 340
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R A H +S ER RR RI+++M+ LQ+LVPN K T+ A MLD ++Y+K LQ Q
Sbjct: 244 RRTRAAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQV 300
Query: 327 KTLS 330
+ +S
Sbjct: 301 QAMS 304
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+SER+R LQ LVP K +TA MLD A Y+K L++Q + L
Sbjct: 279 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 331
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 201
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 222 SSHFTESFTDMKREQGNGELGNSTSAEMAAVEKFL------QFQDSVPCKIRAKRG---- 271
S+HF ++ G G+ E+ A+++ + Q D P IR +
Sbjct: 57 STHFVIGYS--TPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVR 114
Query: 272 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+SIA R+RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q + L
Sbjct: 115 ISDDPQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S A +VRR RISER++ LQ+LVPN K + ML+ A++Y+K LQ Q K L+
Sbjct: 201 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 255
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 318
Query: 329 LS 330
+S
Sbjct: 319 MS 320
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
+T P+++A R RR RISE++R LQ LVP K +TA MLD A +Y K L+ Q K L +
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYFKFLRAQVKALENL 334
Query: 333 RAK 335
R K
Sbjct: 335 RPK 337
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD A++Y+K LQ Q
Sbjct: 317 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 373
Query: 327 KTL 329
+ +
Sbjct: 374 QIM 376
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 14/76 (18%)
Query: 268 AKRGCATH-------------PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDL 314
AK+ C+T P+S+A + RR RISER++ LQELVPN K + ML+
Sbjct: 228 AKKQCSTESKTPKHKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEK 286
Query: 315 AVDYIKDLQNQFKTLS 330
A+ Y+K LQ Q K L+
Sbjct: 287 AISYVKFLQLQVKVLA 302
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQT 147
Query: 329 LS 330
L+
Sbjct: 148 LA 149
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD A++Y+K LQ Q
Sbjct: 333 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 389
Query: 327 KTL 329
+ +
Sbjct: 390 QIM 392
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A + +ER RR RI+E+MR LQ+L+PN +K T+ A ML+ A++Y+K LQ Q +
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 328 TL 329
+
Sbjct: 415 VM 416
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K RA AT +SI R RR RI+ER+R LQ LVPN K + + ML+ AV Y+K LQ
Sbjct: 195 KSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 253
Query: 325 QFKTLS 330
Q K LS
Sbjct: 254 QIKLLS 259
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 147
Query: 329 LS 330
L+
Sbjct: 148 LA 149
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQELVP+ +K T+ A +LD A++Y+K LQ Q
Sbjct: 245 RRTRAAEVH--NMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQV 301
Query: 327 KTL 329
+ +
Sbjct: 302 QIM 304
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R A H +S ER RR RI+E+M+ LQ+LVPN K T+ A MLD ++Y+K LQ Q
Sbjct: 258 RRSRAAAIHNQS--ERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQV 314
Query: 327 KTLS 330
+ +S
Sbjct: 315 QFMS 318
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 328 TLS 330
L+
Sbjct: 201 MLT 203
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR +++ER RR RI+E+MR LQEL+PN +K + + ML+ A++Y+K LQ Q +
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLEEAIEYLKTLQLQVQ 376
Query: 328 TLSDNRAKC 336
+S C
Sbjct: 377 MMSMGTGLC 385
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+S+A R RR RIS+R+R LQ LVP K +TA MLD A+ Y+K L+ Q +TL
Sbjct: 442 PQSVAARHRRERISDRIRVLQRLVPGGTK-MDTASMLDEAIHYVKFLKLQLQTL 494
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P+S+ R RR +I+ER+RKLQ L+PN K + MLD AV Y++ L+ Q L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQVTLLK 59
Query: 331 DN 332
+
Sbjct: 60 SD 61
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 303
EM +Q D P IR + + P+S+A R RR RISE++R LQ LVP
Sbjct: 103 EMMYKIAVMQPVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRLVPGGT 162
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTL 329
K +TA MLD A+ Y+K L+ Q + L
Sbjct: 163 KM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 275 HPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S A +VRR RISER++ LQ+LVPN K + ML+ A++Y+K LQ Q K L+ +
Sbjct: 223 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 279
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A +++ER RR RI+E+M+ LQEL+P+ +K + A MLD A++Y+K LQ Q +
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNK-ADKASMLDEAIEYLKSLQLQLQ 305
Query: 328 TL 329
+
Sbjct: 306 VV 307
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +S ER RR RI+E+MR LQ+L+PN +K T+ A ML+ A++Y+K LQ Q
Sbjct: 357 RRNRAAEVHNQS--ERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQL 413
Query: 327 KTL 329
+ +
Sbjct: 414 QVM 416
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 249 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A++Y+K LQ Q +
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 331
Query: 329 LS 330
+S
Sbjct: 332 MS 333
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R+RR R+S+R+R LQ+LVP K +TA MLD A Y+K L++Q + L
Sbjct: 285 PQTVAARLRRERVSDRLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 337
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+S+A R RR +ISER+R L++L+P +K +TA MLD A++Y+K LQ Q + L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKM-DTATMLDEAIEYVKFLQLQVQIL 442
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 168
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 143 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 196
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 221 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 277
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 278 QMQVQIM 284
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R A H +S ER RR RI+++M+ LQ+LVPN K T+ A MLD ++Y+K LQ Q
Sbjct: 220 RRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 276
Query: 327 KTLS 330
+ +S
Sbjct: 277 QMMS 280
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+++A R RR RISER+R LQ+LVP K +TA MLD A Y++ LQ+Q + L
Sbjct: 324 PQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAASYLRFLQSQVREL 376
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A R+RR RISE++R LQ LVP ++ +TA MLD A+ Y+K L+ Q ++L N
Sbjct: 44 PQSVAARLRRERISEKIRILQRLVPG-GRKMDTASMLDEAIRYVKFLKRQIRSLQPN 99
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ A MLD A++Y+K LQ Q +T
Sbjct: 86 KRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 144
Query: 329 LS 330
L+
Sbjct: 145 LA 146
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K + A MLD A++Y+K LQ Q +
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQM 360
Query: 329 LS 330
+S
Sbjct: 361 MS 362
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P+S+ R RR +I+ER++ LQ LVPN K + MLD A+ Y+K LQNQ + L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELLK 59
Query: 331 DN 332
+
Sbjct: 60 SD 61
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K + A MLD A++Y+K LQ Q +
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQM 356
Query: 329 LS 330
+S
Sbjct: 357 MS 358
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
A +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 244
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
AKR A + +ER RR RI+E+MR LQEL+PN +K T+ A ML+ A++Y+K LQ Q +
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
Query: 328 T 328
Sbjct: 78 V 78
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 222 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 278
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 279 QMQVQIM 285
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R A H +S ER RR RI+++M+ LQ+LVPN K T+ A MLD ++Y+K LQ Q
Sbjct: 182 RRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 238
Query: 327 KTLS 330
+ +S
Sbjct: 239 QMMS 242
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISE 290
E + ELG EM +Q D P ++ R + P+S+A R RR RISE
Sbjct: 120 EHVDEELG--AMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISE 177
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R+R LQ LVP K +TA MLD A+ YIK L+ Q + L
Sbjct: 178 RVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISE 290
E + ELG EM +Q D P ++ R + P+S+A R RR RISE
Sbjct: 119 EHVDEELG--AMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISE 176
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R+R LQ LVP K +TA MLD A+ YIK L+ Q + L
Sbjct: 177 RVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 214
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 203 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 256
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A+DY+K LQ Q +
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQR 313
Query: 329 L 329
+
Sbjct: 314 V 314
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 284 RRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKCSKIQK 343
RR RI+E+MR LQEL+PN +K + A MLD A++Y+K LQ Q + +S C +
Sbjct: 12 RRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLP 70
Query: 344 PVENQI 349
P +
Sbjct: 71 PAMQHL 76
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 19/116 (16%)
Query: 232 MKREQGNGELGN----STSAE----MAAV-EKFLQFQDSVPCKI---------RAKRGCA 273
+ R +G GEL ST A+ MAA+ E + P I R +
Sbjct: 93 VARWRGTGELSGVCNLSTPAQKRNSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKIS 152
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q ++L
Sbjct: 153 KDPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 207
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPN-------MDKQTNTADMLDLAVDYIKD 321
KR A +++ER RR RI+E+M+ LQEL+P D QT+ A MLD A++Y+K
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 322 LQNQFKTL 329
LQ Q +
Sbjct: 115 LQLQVQIF 122
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 218 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 274
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 275 QMQVQIM 281
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R +T P+++A R RR RI+E++R LQ+LVP K +TA MLD A +Y+K L++Q
Sbjct: 335 RKNVKISTDPQTVAARHRRERINEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQV 393
Query: 327 KTL 329
K L
Sbjct: 394 KAL 396
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 321 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 377
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 378 QMQVQIM 384
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ER RR RI+E++R LQEL+PN K T+ MLD A+DY+K LQ Q + L
Sbjct: 26 FSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQML 75
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K +A P+S+A +VRR +I+E+++ LQ+LVPN K + ML+ A+ Y+K LQ
Sbjct: 193 KAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQL 251
Query: 325 QFKTLS 330
Q K L+
Sbjct: 252 QVKVLA 257
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+SIA R RR +ISER+R+L++LVP +K +TA MLD A+ ++K LQ Q + L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNK-LDTASMLDEAIRFVKFLQIQVQLL 440
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 201
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+SIA R RR +ISER+R+L++LVP +K +TA MLD A+ ++K LQ Q + L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNK-LDTASMLDEAIRFVKFLQIQVQLL 440
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISE 290
E + ELG EM +Q D P ++ R + P+S+A R RR RISE
Sbjct: 120 EHVDEELG--AMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISE 177
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R+R LQ LVP K +TA MLD A+ YIK L+ Q + L
Sbjct: 178 RVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A +++ER RR RI+E+M+ LQEL+P +K ++ A MLD A+ Y+K LQ Q +
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQM 363
Query: 329 LS 330
+S
Sbjct: 364 MS 365
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L+
Sbjct: 130 LSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 180
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P R R H +++ER RR RI+E++R LQELVP+ +K T+ A +LD A++Y+K L
Sbjct: 397 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 453
Query: 323 QNQFKTL 329
Q Q + +
Sbjct: 454 QMQVQIM 460
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 263 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDL 322
P + +KR A +++E+ RR++I+E+++ LQ L+PN +K T+ A MLD A++Y+K L
Sbjct: 82 PPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQL 140
Query: 323 QNQFKTL 329
Q Q + L
Sbjct: 141 QLQVQML 147
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 258
>gi|15242760|ref|NP_198306.1| SHI-related sequence 8 [Arabidopsis thaliana]
gi|332006506|gb|AED93889.1| SHI-related sequence 8 [Arabidopsis thaliana]
Length = 173
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 25/25 (100%)
Query: 258 FQDSVPCKIRAKRGCATHPRSIAER 282
F+DSVPC++RAKRGCATHPRSIAER
Sbjct: 9 FEDSVPCRVRAKRGCATHPRSIAER 33
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 147 LSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 197
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++E+ RR RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 328 TLS 330
LS
Sbjct: 251 MLS 253
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 30/128 (23%)
Query: 230 TDMKREQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRIS 289
TD R++ G GN E+A + +RA+RG AT S+AERVRR +IS
Sbjct: 243 TDAARDEA-GSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKIS 301
Query: 290 ERMRKLQELVP-----------------------------NMDKQTNTADMLDLAVDYIK 320
ERM+ LQ+LVP ++ K T A MLD ++Y++
Sbjct: 302 ERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNFQRLLDLVKVTGKAVMLDEIINYVQ 361
Query: 321 DLQNQFKT 328
LQ Q +
Sbjct: 362 SLQCQVEV 369
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+S+A R RR RISER++ LQ LVP K +TA MLD A+ Y+K L+ Q +TL
Sbjct: 140 PQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQTL 192
>gi|195656673|gb|ACG47804.1| hypothetical protein [Zea mays]
Length = 44
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 302 MDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAKCKC 338
MDKQTNT+DMLDLAVDYIK+L++Q + L ++A C C
Sbjct: 1 MDKQTNTSDMLDLAVDYIKELKDQVEKLKHDQANCCC 37
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 277 RSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+S+A R RR RIS+R+R LQ LVP K +TA MLD A+ YIK L+ Q +TL
Sbjct: 374 QSVAARHRRERISDRIRVLQRLVPGGTKM-DTASMLDEAIHYIKFLKQQLQTL 425
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A R+RR RISE++R LQ LVP ++ +TA ML+ A+ Y+K L+ Q + L N
Sbjct: 114 PQSVAARLRRERISEKIRILQRLVPG-GRKMDTASMLEEAIRYVKFLKRQIRLLQPN 169
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 306
+RAKRG AT+ S+AER+RR +ISERM+ LQ+LVP +K T
Sbjct: 138 LRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A +VRR +I+E+++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 238 PQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQLQVKVLA 291
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++E+ RR RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 328 TLS 330
LS
Sbjct: 251 MLS 253
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQ--ELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
A+R A +++ER RR RI+E+MR LQ EL+P+ +K T+ A MLD A++Y+K LQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASMLDEAIEYLKSLQLQ 220
Query: 326 FKTL 329
+ +
Sbjct: 221 LRVM 224
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDNRAK 335
P+S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q K L
Sbjct: 124 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLLQSTPQN 182
Query: 336 CKCSKIQKPVENQIV 350
+ IQ P+ +Q +
Sbjct: 183 QQQQHIQLPLSSQCI 197
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
+KR + +++E+ RR RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q +
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 328 TLS 330
LS
Sbjct: 251 MLS 253
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 303
EM +Q D P IR + + P+S+A R RR RISE++R LQ LVP
Sbjct: 102 EMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGT 161
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTL-----SDNRAKC 336
K +TA MLD A+ Y+K L+ Q + L S N +C
Sbjct: 162 KM-DTASMLDEAIRYVKFLKRQIRLLQSIPQSSNPPQC 198
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R T P+S+ R RR RI+ER++ LQ LVPN K + + ML+ AV Y+K LQ Q K L
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLL 280
Query: 330 S 330
S
Sbjct: 281 S 281
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 27 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 80
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
K ++ G A +SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ
Sbjct: 230 KPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSK-VDLVTMLEKAISYVKFLQL 288
Query: 325 QFKTLS 330
Q K L+
Sbjct: 289 QVKVLA 294
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD ++Y+K LQ Q
Sbjct: 227 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQV 283
Query: 327 KTL 329
+ +
Sbjct: 284 QIM 286
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 303
EM +Q D P IR + + P+S+A R RR RISE++R LQ LVP
Sbjct: 107 EMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGT 166
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTL 329
K +TA MLD A+ Y+K L+ Q + L
Sbjct: 167 KM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 355 SDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQVREL 409
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 323
+RA+RG AT S+AERVRR +I+E+++ LQ +VP K A MLD ++Y L+
Sbjct: 155 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYFLSLK 212
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R H +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
Query: 330 S 330
+
Sbjct: 254 T 254
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR++I+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 90 LSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 140
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R H +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L
Sbjct: 176 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 232
Query: 330 S 330
+
Sbjct: 233 T 233
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R A H +S ER RR +I++RM+ LQ+LVPN K T+ A MLD ++Y+K LQ Q + +
Sbjct: 283 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMM 339
Query: 330 S 330
S
Sbjct: 340 S 340
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S +VRR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 172 PQSAVAKVRRERISERLKVLQDLVPNGTK-VDMVTMLEKAITYVKFLQLQVKVLA 225
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R + C+ +S+ + RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ Q
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 214
Query: 327 KTLS 330
K LS
Sbjct: 215 KLLS 218
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +S ER RR RI+E+MR LQEL+P+ +K + A +LD A++Y+K LQ Q
Sbjct: 232 RRSRAAEVHNQS--ERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQMQL 288
Query: 327 KTL 329
+ +
Sbjct: 289 QIM 291
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R + C+ +S+ + RR RI+ER+R LQ+LVPN K + + ML+ AV Y+K LQ Q
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 226
Query: 327 KTLS 330
K LS
Sbjct: 227 KLLS 230
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q + L N
Sbjct: 35 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRQLQSN 90
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
P+S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q + L N
Sbjct: 98 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRQLQSN 153
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 368 SDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 422
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 268 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
A+R + + +ER RR +I+E+++ LQEL+PN +K T+ MLD A+DY+K LQ Q +
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 328 TL 329
L
Sbjct: 73 ML 74
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 303
EM +Q D P +R + + P+S+A R RR RISE++R LQ LVP
Sbjct: 87 EMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGT 146
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTL 329
K +TA MLD A+ Y+K L+ Q + L
Sbjct: 147 KM-DTASMLDEAILYVKFLKRQIRLL 171
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 372 SDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 426
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 270 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R H +++E+ RR+RI+E+M+ LQ L+PN +K T+ A MLD A++Y+K LQ Q + L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
Query: 330 S 330
+
Sbjct: 254 T 254
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
++E+ RR RI+E+M+ LQ LVPN K T+ A MLD A++Y+K LQ Q + LS
Sbjct: 72 LSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLS 122
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 384 SDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 438
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +++ER RR RI+E+MR LQEL+P+ +K T+ A +LD ++Y+K LQ Q
Sbjct: 321 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQV 377
Query: 327 KTL 329
+ +
Sbjct: 378 QIM 380
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 265 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQN 324
++R R H +++E+ RR +I+++MR L+EL+PN +K + A MLD A+DY+K L+
Sbjct: 321 RVRRIRNPVVH--NLSEKKRREKINKKMRTLKELIPNCNK-VDKASMLDDAIDYLKTLKL 377
Query: 325 QFKTLS 330
Q + +S
Sbjct: 378 QLQIMS 383
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ A+ Y+K LQ Q K LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q + L
Sbjct: 147 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 199
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R ++ P+++A R RR RIS+R+R LQ++VP K +TA MLD A +Y+K L++Q
Sbjct: 386 RKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGSK-MDTASMLDEAANYLKFLRSQV 444
Query: 327 KTL 329
K L
Sbjct: 445 KAL 447
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
AT P+S+ R RR RI+ER++ LQ LVPN K + + ML+ A+ Y+K LQ Q K LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 274 THPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ P+++A R RR RISER+R LQ+LVP K +TA MLD A +Y++ L++Q + L
Sbjct: 372 SDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 426
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 266 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
+RA+RG AERVRR +ISE + LQ+LVP+ + T AD LD ++Y++ L+ Q
Sbjct: 21 VRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIINYVQSLKRQ 80
Query: 326 FKTL 329
+ L
Sbjct: 81 VELL 84
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A ++AER RR +I+E+M+ LQEL+P +K T + LD A++Y+K LQ+Q +
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVST-LDAAIEYVKWLQSQIQM 193
Query: 329 L 329
+
Sbjct: 194 I 194
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR A ++AER RR +I+E+M+ LQEL+P +K T + + D+ ++Y+K LQ Q +
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDV-IEYMKSLQMQIQM 1197
Query: 329 LS 330
+S
Sbjct: 1198 MS 1199
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKT 328
KR ++AER RR +I+E ++ LQEL+P +K T + LD A++Y+K LQ+Q +
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVST-LDDAIEYVKWLQSQIQM 639
Query: 329 LS 330
+S
Sbjct: 640 MS 641
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 269 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFK 327
KR A ++AER RR +I+E+M+ LQEL+P +K T + + D+ ++Y+K L+ Q +
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDV-IEYVKSLEMQIQ 1626
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 279 IAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+ER RR RI+E+++ LQEL+PN K T+ MLD A+DY+K LQ Q + L
Sbjct: 27 FSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQML 76
>gi|226497322|ref|NP_001142164.1| uncharacterized protein LOC100274330 [Zea mays]
gi|224031213|gb|ACN34682.1| unknown [Zea mays]
gi|413926621|gb|AFW66553.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 625
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
AER RR +++ER+ KL+ LVPN+ K A + D A+DYI LQNQ K L D
Sbjct: 367 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDE 418
>gi|194707424|gb|ACF87796.1| unknown [Zea mays]
gi|238014816|gb|ACR38443.1| unknown [Zea mays]
gi|413926620|gb|AFW66552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 557
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
AER RR +++ER+ KL+ LVPN+ K A + D A+DYI LQNQ K L D
Sbjct: 299 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDE 350
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 235 EQGNGELGNSTSAEMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISE 290
E + ELG EM +Q D P ++ R + P+S+ R RR RISE
Sbjct: 120 EHVDEELG--AMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVVARHRRERISE 177
Query: 291 RMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
R+R LQ LVP K +TA MLD A+ YIK L+ Q + L
Sbjct: 178 RVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|224033315|gb|ACN35733.1| unknown [Zea mays]
gi|238015234|gb|ACR38652.1| unknown [Zea mays]
gi|413926622|gb|AFW66554.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413926623|gb|AFW66555.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 594
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSDN 332
AER RR +++ER+ KL+ LVPN+ K A + D A+DYI LQNQ K L D
Sbjct: 336 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDE 387
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P S+A R RR RISE++R LQ LVP K +TA MLD A+ Y+K L+ Q + L
Sbjct: 103 PASVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 155
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQ 325
P+++A R+RR ++SER+R LQ LVP K +TA MLD A Y+K L++Q
Sbjct: 304 PQTVAARLRREKVSERLRALQRLVPGGSKM-DTASMLDEAASYLKFLKSQ 352
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
P+S+A + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 257 PQSLAAKNRRERISERLKILQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 310
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 248 EMAAVEKFLQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 303
EM +Q D P +R + + P+S+A R RR RISE++R LQ LVP
Sbjct: 96 EMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGT 155
Query: 304 KQTNTADMLDLAVDYIKDLQNQFKTL 329
K +TA MLD A+ Y+K L+ Q + L
Sbjct: 156 KM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|413926619|gb|AFW66551.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 526
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 280 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLSD 331
AER RR +++ER+ KL+ LVPN+ K A + D A+DYI LQNQ K L D
Sbjct: 268 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQD 318
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 273 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
+T P+++A R RR RIS+R+R LQ +VP K +TA MLD A +Y+K L++Q K L
Sbjct: 205 STDPQTVAARQRRERISDRIRVLQGMVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 260
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 283 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
VRR RISERM+ LQ LVP +K T A MLD ++Y++ LQ Q + LS
Sbjct: 204 VRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLS 251
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +S ER RR RI+E+MR LQEL+P+ +K + A +LD A++Y+K LQ Q
Sbjct: 194 RRSRAAEVHNQS--ERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQMQV 250
Query: 327 KTL 329
+ +
Sbjct: 251 QVM 253
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P+S+ R RR +I+ER++ LQ LVPN K + MLD A+ Y+K LQ Q + L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELLK 59
Query: 331 DN 332
+
Sbjct: 60 SD 61
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 276 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTL 329
P+S+A R RR RIS+++R LQ LVP K +TA MLD AV Y+K L+ Q +TL
Sbjct: 116 PQSVAARHRRERISQKIRILQRLVPGGTKM-DTASMLDEAVHYVKFLKRQVQTL 168
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H +S ER RR RI+E+MR LQEL+P+ +K + A +LD A++Y+K LQ Q
Sbjct: 203 RRSRAAEVHNQS--ERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQMQV 259
Query: 327 KTL 329
+ +
Sbjct: 260 QVM 262
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 267 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQF 326
R R H + +ER RR +I+E+++ LQEL+PN +K T+ MLD A+DY+K LQ Q
Sbjct: 15 RRSRSAEFH--NFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQL 71
Query: 327 KTL 329
+ L
Sbjct: 72 QML 74
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 271 GCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQNQFKTLS 330
G AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+ Q K LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 331 DNR 333
+R
Sbjct: 186 MSR 188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.125 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,316,669,911
Number of Sequences: 23463169
Number of extensions: 214370219
Number of successful extensions: 498554
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 1208
Number of HSP's that attempted gapping in prelim test: 492901
Number of HSP's gapped (non-prelim): 5345
length of query: 350
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 207
effective length of database: 9,003,962,200
effective search space: 1863820175400
effective search space used: 1863820175400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)