BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018790
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RWL0|E2FF_ARATH E2F transcription factor-like E2FF OS=Arabidopsis thaliana GN=E2FF
PE=2 SV=1
Length = 354
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 231/369 (62%), Gaps = 50/369 (13%)
Query: 5 SSSAFGFREAEPDGKQFYSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRI 64
SS+ ++AE G Q YSRKEKSLG+L S FL+LYNRD V+ IGLDDAA +LGVERRRI
Sbjct: 2 SSAIVVSQDAESLGLQIYSRKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGQLGVERRRI 61
Query: 65 YDVVNILESIGVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNINGCTNSGNVLNDN 124
YDVVNILESIG+VAR+ KN YSW+GF IP +L+ LKEEG+RE + NS V N
Sbjct: 62 YDVVNILESIGIVARRGKNQYSWKGFGEIPRSLDELKEEGMRERLGYSSSNNSDKVSNGC 121
Query: 125 ENEGS-TCTVTDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALLGD 183
E E T T D ++SSSSK++ K+EKSLWLL QNFVK+FLCSD D+ITLDSAA ALL D
Sbjct: 122 EREEPLTLTPDDQENSSSSKMDQKKEKSLWLLAQNFVKMFLCSDDDLITLDSAAKALLSD 181
Query: 184 SNNSTAMRK-------------------------SRKPAFRWLGWKGNPCNRSAGFLDLN 218
S +S MR +RKPA+RWLG K + R +
Sbjct: 182 SPDSVHMRTKVRRLYDIANVFASMNLIEKTHIPVTRKPAYRWLGSK-SIAERGLSLFNSG 240
Query: 219 EPKKRVFGTDITNLRLKKNKVDSLTEKKSNPKLNVPKYFKHCNEESNPDESRLEQHSKHK 278
EP KRVFGT+ITNLR K+NK + +K Y KH DE EQ SK
Sbjct: 241 EP-KRVFGTEITNLRAKRNKTYCSSIRKQ------IGYKKH-------DEENTEQESKPA 286
Query: 279 SKGFVYGPFTPASISGIHDSRSKNTK----QVLDFASLASTFRPKYHNEAVNGLFGHYVE 334
+ +V+GPF+P I S++ N K ++L+ +LAST++P+Y N+ + GL GH+ E
Sbjct: 287 ASKYVFGPFSP-----IGASKTNNDKVGKGRLLEIEALASTYQPQYCNQEITGLLGHFTE 341
Query: 335 AWKSWYAEV 343
AWK WYAEV
Sbjct: 342 AWKKWYAEV 350
>sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE
PE=2 SV=1
Length = 403
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 232/366 (63%), Gaps = 51/366 (13%)
Query: 22 YSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQA 81
YSRK+KSLGLLC+ FL LYNR+G+E +GLDDAAS+LGVERRRIYD+VN+LES+GV+ R+A
Sbjct: 32 YSRKQKSLGLLCTNFLALYNREGIEMVGLDDAASKLGVERRRIYDIVNVLESVGVLTRRA 91
Query: 82 KNLYSWQGFDAIPEALEVLKEEGLRENF-------NINGCTNSGNVLNDNENEGSTCTVT 134
KN Y+W+GF AIP AL+ L+EEG+++ F N+ G + + ++ S+ T +
Sbjct: 92 KNQYTWKGFSAIPGALKELQEEGVKDTFHRFYVNENVKGSDDEDDDEESSQPHSSSQTDS 151
Query: 135 D-----GQDSSSSKIESKREKSLWLLTQNFVKLFLCSD-VDMITLDSAAMALLGDSNNST 188
Q S SKI+++REKSL LLTQNF+KLF+CS+ + +I+LD AA LLGD++N++
Sbjct: 152 SKPGSLPQSSDPSKIDNRREKSLGLLTQNFIKLFICSEAIRIISLDDAAKLLLGDAHNTS 211
Query: 189 AMRK-------------------------SRKPAFRWLGWKGNPC-NRSAGFLDLNEPKK 222
MR SRKPAF+WLG+ G P S+ L L E +K
Sbjct: 212 IMRTKVRRLYDIANVLSSMNLIEKTHTLDSRKPAFKWLGYNGEPTFTLSSDLLQL-ESRK 270
Query: 223 RVFGTDITNLRLKKNKVDSLTEKKSNPKLNVPKYFKHCNEESNPDESRLEQHSKHKSK-G 281
R FGTDITN+ +K++K S +++ + + K KH ES+ ++S S+H S+ G
Sbjct: 271 RAFGTDITNVNVKRSKSSSSSQENATERR--LKMKKHSTPESSYNKSFDVHESRHGSRGG 328
Query: 282 FVYGPFTPAS----ISGIHDSRSKNTKQVLDFASLASTFRPKYHNEAVNGLFGHYVEAWK 337
+ +GPF P + +G+ D N+++ D +L S +RP Y N+ + LF HY++AWK
Sbjct: 329 YHFGPFAPGTGTYPTAGLED----NSRRAFDVENLDSDYRPSYQNQVLKDLFSHYMDAWK 384
Query: 338 SWYAEV 343
+W++EV
Sbjct: 385 TWFSEV 390
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 2 SSSSSSAFGFREAEPDGKQFYSRKEKSLGLLCSKFLKLYN-RDGVESIGLDDAA------ 54
S + SS G D + +R+EKSLGLL F+KL+ + + I LDDAA
Sbjct: 147 SQTDSSKPGSLPQSSDPSKIDNRREKSLGLLTQNFIKLFICSEAIRIISLDDAAKLLLGD 206
Query: 55 ----SRLGVERRRIYDVVNILESIGVVARQA-----KNLYSWQGFDAIP 94
S + + RR+YD+ N+L S+ ++ + K + W G++ P
Sbjct: 207 AHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTLDSRKPAFKWLGYNGEP 255
>sp|Q9LFQ9|E2FD_ARATH E2F transcription factor-like E2FD OS=Arabidopsis thaliana GN=E2FD
PE=1 SV=1
Length = 359
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 204/362 (56%), Gaps = 51/362 (14%)
Query: 20 QFYSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVAR 79
Q YSRK+KSLG+L + FL LYNR V+ GLDDAA++LGVERRRIYDVVNILESIG+VAR
Sbjct: 9 QVYSRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVAR 68
Query: 80 QAKNLYSWQGFDAIPEALEVLKEEGLRENFNING-CTNSGNVLNDNENEGSTCTVTDGQD 138
KN YSW+GF A+P AL LKEEG++E F I S V+ + E E S D Q+
Sbjct: 69 SGKNQYSWKGFGAVPRALSELKEEGMKEKFAIVPFVAKSEMVVYEKEGEESFMLSPDDQE 128
Query: 139 -SSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALLGDSNNSTAMRKSR--- 194
S S + ++++E++LWLL QNFVKLFLCSD D++T DSA ALL +S + +K R
Sbjct: 129 FSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLY 188
Query: 195 ---------------------KPAFRWLGWKGNPCNR----SAGFLDLNEPKKRVFGTDI 229
KPA+RWLG K NR SA D N PKKR FGT++
Sbjct: 189 DIANVFSSMKLIEKTHVPETKKPAYRWLGSKTIFENRFIDGSASLCDRNVPKKRAFGTEL 248
Query: 230 TNLRLKKNKVD-SLTEKKSNPKLNVPKYFK--HCNEESNPDESRLEQHSKHKSKGFVYGP 286
TN+ K+NK S + K N N K C ++ PD K F G
Sbjct: 249 TNVNAKRNKSGCSKEDSKRNGNQNTSIVIKQEQC-DDVKPD-----------VKNFASGS 296
Query: 287 FTPASISGIHDS----RSKNTKQVLDFASLASTFRPKYHNEAVNGLFGHYVEAWKSWYAE 342
TPA S +D R + V++ +L++ ++P Y N + GLF HY E ++S+ E
Sbjct: 297 STPAGTSESNDMGNNIRPRGRLGVIE--ALSTLYQPSYCNPELLGLFAHYNETFRSYQEE 354
Query: 343 VG 344
G
Sbjct: 355 FG 356
>sp|Q5RIX9|E2F7_DANRE Transcription factor E2F7 OS=Danio rerio GN=e2f7 PE=3 SV=2
Length = 723
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 123/225 (54%), Gaps = 46/225 (20%)
Query: 13 EAEPDGKQFYSRKEKSLGLLCSKFLKLYNRDGVES-----IGLDDAASRLGVERRRIYDV 67
EA + ++ SRK+KSLGLLC KFL LY D ES I LD+ A+ LGVERRRIYD+
Sbjct: 136 EALDESERRPSRKQKSLGLLCQKFLALYP-DYPESSESINISLDEVATCLGVERRRIYDI 194
Query: 68 VNILESIGVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNINGCTNSGNVLNDNENE 127
VN+LES+ +V+R+AKN+Y W G +P+ L+ L + G +++++ GN L+ ++
Sbjct: 195 VNVLESLMLVSRKAKNMYVWHGRSRLPQTLQGLLQAGRDQHYDLLMDQREGNGLHAVQH- 253
Query: 128 GSTCTVTDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALLG----- 182
V + +SS +++KSL +++Q FV LFL S +TLD AA L+
Sbjct: 254 -----VQNAHAASS----RRKDKSLRIMSQKFVMLFLVSKTQTVTLDMAAKILIEEGQEE 304
Query: 183 --DSNNSTAMR-----------------------KSRKPAFRWLG 202
DS T +R K+RKP F+W+G
Sbjct: 305 SYDSKYKTKVRRLYDIANVLTSLNLIKKIHMREEKTRKPVFKWIG 349
>sp|E1BE02|E2F7_BOVIN Transcription factor E2F7 OS=Bos taurus GN=E2F7 PE=3 SV=1
Length = 911
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 59/263 (22%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLYNRDGVES----IGLDDAASRLGVERRRIYDVVNILESI 74
KQ SRK+KSLGLLC KFL Y + + I LD+ A LGVERRRIYD+VN+LES+
Sbjct: 136 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 195
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNINGC---TNSGNVLNDNENEGSTC 131
+V+R AKN YSW G ++P+ L L+ G ++ + N ++ E
Sbjct: 196 HLVSRVAKNQYSWHGRHSLPKTLRNLQRLGEKQKYEEQMAHLQQKELNPIDHKSGERRRD 255
Query: 132 TVTDGQDS----------SSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALL 181
D QD SS S+++KSL +++Q FV LFL S ++TLD AA L+
Sbjct: 256 GCPDSQDPQLLDFPEPDCPSSSANSRKDKSLKIMSQKFVMLFLVSKTKIVTLDVAAKILI 315
Query: 182 GDSNN-------STAMR-----------------------KSRKPAFRWLGWKGNPCNRS 211
+S + T +R + RKPAF+W+G P + S
Sbjct: 316 EESQDIPDHSKFKTKVRRLYDIANVLTSLMLIKKVHVTEDRGRKPAFKWIG----PVDFS 371
Query: 212 AG---FLDLNEP-----KKRVFG 226
+ +D++ P KK ++G
Sbjct: 372 STDDDLVDVSTPVLPELKKEIYG 394
>sp|Q6S7F2|E2F7_MOUSE Transcription factor E2F7 OS=Mus musculus GN=E2f7 PE=1 SV=1
Length = 904
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 55/235 (23%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLYNRDGVES----IGLDDAASRLGVERRRIYDVVNILESI 74
KQ SRK+KSLGLLC KFL Y + + I LD+ A LGVERRRIYD+VN+LES+
Sbjct: 138 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 197
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNIN-GCTNS------GNVLNDNENE 127
+V+R AKN Y W G ++P+ L L+ G + + C G + +
Sbjct: 198 HLVSRVAKNQYGWHGRHSLPKTLRTLQRLGEEQKYEEQMACLQQKELDLMGYRFGERRKD 257
Query: 128 GSTCTVTDGQDS----------SSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAA 177
GS D +D SS S+++KSL +++Q FV LFL S ++TLD AA
Sbjct: 258 GS----PDPRDPHLLDFSEADYPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAA 313
Query: 178 MALLGDSNNS-------TAMR-----------------------KSRKPAFRWLG 202
L+ +S ++ T +R + RKPAF+W+G
Sbjct: 314 KILIEESQDTPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIG 368
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 9 FGFREAEPDGKQFYSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAA-------------S 55
F EA+ SRK+KSL ++ KF+ L+ + + LD AA S
Sbjct: 268 LDFSEADYPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDTPDHS 327
Query: 56 RLGVERRRIYDVVNILESIGVV-------ARQAKNLYSWQG---FDAIPEAL 97
+ + RR+YD+ N+L S+ ++ R K + W G F +I E L
Sbjct: 328 KFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIGPVDFSSIDEEL 379
>sp|F1QZ88|E2F8_DANRE Transcription factor E2F8 OS=Danio rerio GN=e2f8 PE=2 SV=1
Length = 917
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 121/248 (48%), Gaps = 57/248 (22%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVVNILESI 74
K SRK+KSLGLLC KFL Y N I LDD A+ L VERRRIYD++N+LES+
Sbjct: 121 KLHISRKDKSLGLLCYKFLARYPNYPNPALNNGISLDDVAAELHVERRRIYDIMNVLESL 180
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLREN--------------------FNINGC 114
+V+R AKN Y+W G + + L VLK G +EN F+++G
Sbjct: 181 NMVSRLAKNRYTWHGRVKLAQTLAVLKRAG-KENRYEQLMQQIRQRSQEREEREFDLDGE 239
Query: 115 TNSGNVLNDNENEG-STCTVTDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITL 173
++ E +G S G DS ++ S+++KSL +++Q FV LFL S +++L
Sbjct: 240 EKENEEMSSFEVDGDSGLADLPGADSKAASANSRKDKSLRVMSQKFVMLFLVSSPPVVSL 299
Query: 174 DSAAMALLG-------DSNN-STAMR-----------------------KSRKPAFRWLG 202
D AA L+G D N T +R K RKPAF+W G
Sbjct: 300 DVAAKILIGEDHVVDQDKNKFKTKIRRLYDIANVLSSLELIKKVHVTEDKGRKPAFKWTG 359
Query: 203 WKGNPCNR 210
+ P +
Sbjct: 360 PEDIPSPK 367
>sp|F6YVB9|E2F7_XENTR Transcription factor E2F7 OS=Xenopus tropicalis GN=e2f7 PE=3 SV=1
Length = 862
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 50/228 (21%)
Query: 23 SRKEKSLGLLCSKFLKLYNRDGVES----IGLDDAASRLGVERRRIYDVVNILESIGVVA 78
SRK+KSLGLLC KFL Y + + I LD+AAS LGVERRRIYD+VN+LES+ +V+
Sbjct: 139 SRKQKSLGLLCQKFLARYPSYPISTEKMTISLDEAASSLGVERRRIYDIVNVLESLHLVS 198
Query: 79 RQAKNLYSWQGFDAIPEALEVLKEEGLRENFNIN-GCTNSGNV----LNDNENEGSTCTV 133
R AKN Y W G + E L L+ G ++N+ C N ++ D + +G C +
Sbjct: 199 RVAKNQYCWHGQHNLNETLRNLQHIGEKQNYRAQIACFNLRDMGMEYKCDEQEKG--CHI 256
Query: 134 ---------TDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALLGDS 184
D S S+++KSL +++Q FV LFL S +ITL+ AA L+ +S
Sbjct: 257 DHLNTPLIELSEADCPSVSSSSRKDKSLRIMSQKFVMLFLVSTTKIITLEIAAKILIEES 316
Query: 185 NNS-------TAMR-----------------------KSRKPAFRWLG 202
++ T +R + RKPAF+W+G
Sbjct: 317 QDAADHSKFKTKVRRLYDIANVLTSLGLIKKVHVTDERGRKPAFKWIG 364
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 23 SRKEKSLGLLCSKFLKLYNRDGVESIGLDDAA-------------SRLGVERRRIYDVVN 69
SRK+KSL ++ KF+ L+ + I L+ AA S+ + RR+YD+ N
Sbjct: 278 SRKDKSLRIMSQKFVMLFLVSTTKIITLEIAAKILIEESQDAADHSKFKTKVRRLYDIAN 337
Query: 70 ILESIGVVA-------RQAKNLYSWQG---FDAIPEALEV 99
+L S+G++ R K + W G F A + +EV
Sbjct: 338 VLTSLGLIKKVHVTDERGRKPAFKWIGPVDFTAEDQKMEV 377
>sp|Q96AV8|E2F7_HUMAN Transcription factor E2F7 OS=Homo sapiens GN=E2F7 PE=1 SV=3
Length = 911
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 47/231 (20%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLYNRDGVES----IGLDDAASRLGVERRRIYDVVNILESI 74
KQ SRK+KSLGLLC KFL Y + + I LD+ A LGVERRRIYD+VN+LES+
Sbjct: 137 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 196
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNINGCTNSGNVLN-----------D 123
+V+R AKN Y W G ++P+ L L+ G + + L+ D
Sbjct: 197 HLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELDLIDYKFGERKKD 256
Query: 124 NENEGSTCTVTD--GQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALL 181
+ + + D D SS S+++KSL +++Q FV LFL S ++TLD AA L+
Sbjct: 257 GDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILI 316
Query: 182 GDSNNS-------TAMR-----------------------KSRKPAFRWLG 202
+S ++ T +R + RKPAF+W+G
Sbjct: 317 EESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIG 367
>sp|D4A4D7|E2F7_RAT Transcription factor E2F7 OS=Rattus norvegicus GN=E2f7 PE=3 SV=1
Length = 902
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 47/231 (20%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLYNRDGVES----IGLDDAASRLGVERRRIYDVVNILESI 74
K+ SRK+KSLGLLC KFL Y + + I LD+ A LGVERRRIYD+VN+LES+
Sbjct: 138 KRRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 197
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNIN-GCTNS----------GNVLND 123
+V+R AKN Y W G ++P+ L L+ G + + C G D
Sbjct: 198 HLVSRVAKNQYGWHGRHSLPKTLRTLQRLGEEQKYEEQMACLQQKELDLMEYRFGERRKD 257
Query: 124 NENEGSTCTVTDGQDS--SSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMALL 181
+ + D +S SS S+++KSL +++Q FV LFL S ++TLD AA L+
Sbjct: 258 GSPDPRDQHLLDFSESDYPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILI 317
Query: 182 GDSNNS-------TAMR-----------------------KSRKPAFRWLG 202
+S ++ T +R + RKPAF+W+G
Sbjct: 318 EESQDTPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIG 368
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 23/98 (23%)
Query: 23 SRKEKSLGLLCSKFLKLYNRDGVESIGLDDAA-------------SRLGVERRRIYDVVN 69
SRK+KSL ++ KF+ L+ + + LD AA S+ + RR+YD+ N
Sbjct: 282 SRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDTPDHSKFKTKVRRLYDIAN 341
Query: 70 ILESIGVV-------ARQAKNLYSWQG---FDAIPEAL 97
+L S+ ++ R K + W G F +I E L
Sbjct: 342 VLTSLALIKKVHVTEERGRKPAFKWIGPVDFSSIDEEL 379
>sp|Q58FA4|E2F8_MOUSE Transcription factor E2F8 OS=Mus musculus GN=E2f8 PE=1 SV=1
Length = 860
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 117/243 (48%), Gaps = 56/243 (23%)
Query: 23 SRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVA 78
SRKEKSLGLLC KFL Y N I LD+ A L VERRRIYD+VN+LES+ +V+
Sbjct: 112 SRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVS 171
Query: 79 RQAKNLYSWQGFDAIPEALEVLKEEG----------------LRENFN-INGCTNSGNVL 121
R AKN Y+W G + + L LK G + F+ I C +V+
Sbjct: 172 RLAKNRYTWHGRHNLTKTLGTLKSVGEENKYAEQIMMIKRKEYEQEFDFIKSCGIEDHVI 231
Query: 122 NDNENE---GSTCTV-TDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAA 177
+ + C V G + ++ + S+++KSL +++Q FV LFL S +++L+ AA
Sbjct: 232 KSHTGQNGHSDMCFVELPGVEFRAASVNSRKDKSLRVMSQKFVMLFLVSTPQIVSLEIAA 291
Query: 178 MALLGD--------SNNSTAMR-----------------------KSRKPAFRWLGWKGN 206
L+G+ S T +R + RKPAF+W G + +
Sbjct: 292 KILIGEDHVEDLDKSKYKTKIRRLYDIANVLSSLDLIKKVHVTEERGRKPAFKWTGPEIS 351
Query: 207 PCN 209
P N
Sbjct: 352 PNN 354
>sp|E1BKK0|E2F8_BOVIN Transcription factor E2F8 OS=Bos taurus GN=E2F8 PE=3 SV=2
Length = 866
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 56/241 (23%)
Query: 23 SRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVA 78
SRKEKSLGLLC KFL Y N I LD+ A L VERRRIYD+VN+LES+ +V+
Sbjct: 112 SRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVS 171
Query: 79 RQAKNLYSWQGFDAIPEALEVLKEEG----------------LRENFNINGCTNSGNVL- 121
R AKN Y+W G + + LE LK G + F ++ N+ + +
Sbjct: 172 RLAKNRYTWHGRHNLNQILETLKSVGEENKYAEQIMMIKKKEYEQEFEVSKSYNTEDPII 231
Query: 122 ----NDNENEGSTCTVTDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAA 177
N + C G + ++ + S+++KSL +++Q FV LFL S +++L+ AA
Sbjct: 232 KSNTGQNGHPDMCCAERPGVELRAASVNSRKDKSLKVMSQKFVTLFLVSTPQIVSLEIAA 291
Query: 178 MAL--------LGDSNNSTAMR-----------------------KSRKPAFRWLGWKGN 206
L L S T +R + RKPAF+W G + +
Sbjct: 292 KILTWEDHVEDLDRSKFKTKIRRLYDIANVLSSLDLIKKVHVTEERGRKPAFKWTGPEIS 351
Query: 207 P 207
P
Sbjct: 352 P 352
>sp|F7EA39|E2F8_XENTR Transcription factor E2F8 OS=Xenopus tropicalis GN=e2f8 PE=3 SV=1
Length = 736
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 59/263 (22%)
Query: 19 KQFYSRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVVNILESI 74
K SRKEKSLGLLC KFL Y N SI LD+ A L VERRRIYD+VN+LES+
Sbjct: 93 KTLPSRKEKSLGLLCHKFLARYPSYPNPAVNNSICLDEVAGELSVERRRIYDIVNVLESL 152
Query: 75 GVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENF--NINGCTNSGNVLNDNENEGSTCT 132
+V+R AKN Y W G + + + LK+ G + I D++N + T
Sbjct: 153 HMVSRLAKNKYIWHGRLNLSKTFDALKKVGEENRYGEQIQLLRKREQEECDSQNSPNAET 212
Query: 133 V-------------TDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAAMA 179
G + ++ + S++EKSL +++Q FV LFL SD +++L+ AA
Sbjct: 213 QKPLAKQPEVGFVELPGLEFRAASVNSRKEKSLRVMSQRFVMLFLVSDPQIVSLEVAAKI 272
Query: 180 LLGD--------SNNSTAMR-----------------------KSRKPAFRWLGW----- 203
L+G+ S T +R K RKPAF+W
Sbjct: 273 LIGEDQLEDLDKSKFKTKIRRLYDIANVLTSLNLIKKVHVTEEKGRKPAFQWTCPELCTD 332
Query: 204 ----KGNPCNRSAGFLDLNEPKK 222
+ +P + +DL+ PK+
Sbjct: 333 DQENRSSPAALTPVAIDLSSPKE 355
>sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1
Length = 867
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 115/241 (47%), Gaps = 56/241 (23%)
Query: 23 SRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVA 78
SRKEKSLGLLC KFL Y N I LD+ A L VERRRIYD+VN+LES+ +V+
Sbjct: 112 SRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVS 171
Query: 79 RQAKNLYSWQGFDAIPEALEVLKEEG----------------LRENFN-INGCTNSGNVL 121
R AKN Y+W G + + L LK G + F+ I + +++
Sbjct: 172 RLAKNRYTWHGRHNLNKTLGTLKSIGEENKYAEQIMMIKKKEYEQEFDFIKSYSIEDHII 231
Query: 122 NDNENEGS---TCTV-TDGQDSSSSKIESKREKSLWLLTQNFVKLFLCSDVDMITLDSAA 177
N C V G + ++ + S+++KSL +++Q FV LFL S +++L+ AA
Sbjct: 232 KSNTGPNGHPDMCFVELPGVEFRAASVNSRKDKSLRVMSQKFVMLFLVSTPQIVSLEVAA 291
Query: 178 MALLGD--------SNNSTAMR-----------------------KSRKPAFRWLGWKGN 206
L+G+ S T +R + RKPAF+W G + +
Sbjct: 292 KILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHVTEERGRKPAFKWTGPEIS 351
Query: 207 P 207
P
Sbjct: 352 P 352
>sp|F1LMN3|E2F8_RAT Transcription factor E2F8 OS=Rattus norvegicus GN=E2f8 PE=2 SV=2
Length = 860
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 118/254 (46%), Gaps = 57/254 (22%)
Query: 13 EAEPDGKQFYSRKEKSLGLLCSKFLKLY----NRDGVESIGLDDAASRLGVERRRIYDVV 68
+A+ + K SRKEKSLGLLC KFL Y N I LD+ A L VERRRIYD+V
Sbjct: 101 QAKTNEKSQPSRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELDVERRRIYDIV 160
Query: 69 NILESIGVVARQAKNLYSWQGFDAIPEALEVLKEEGLRENFN-----------------I 111
N+LES+ +V+R AKN Y+W G + + L LK G + I
Sbjct: 161 NVLESLHMVSRLAKNRYTWHGRHNLTKTLGTLKSVGEENKYAEQIMMIKRKEHEQEFDFI 220
Query: 112 NGC-TNSGNVLNDNENE---GSTCTV-TDGQDSSSSKIESKREKSLWLLTQNFVKLFLCS 166
C +V+ + C V G + ++ S+++KSL +++Q FV LFL S
Sbjct: 221 KSCGLEDHHVIKSTAGQNGHSDMCFVELPGVEFRAASANSRKDKSLRVMSQKFVMLFLVS 280
Query: 167 DVDMITLDSAAMALLGD--------SNNSTAMR-----------------------KSRK 195
+++L+ AA L+G+ S T +R + RK
Sbjct: 281 TPQIVSLEIAAKILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHVTEERGRK 340
Query: 196 PAFRWLGWKGNPCN 209
PAF+W G + +P N
Sbjct: 341 PAFKWTGPEISPNN 354
>sp|Q9FV71|E2FB_ARATH Transcription factor E2FB OS=Arabidopsis thaliana GN=E2FB PE=1 SV=1
Length = 469
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 24 RKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQA 81
R + SLGLL KF+ L + DG+ + L+ AA L V++RRIYD+ N+LE IG++ +
Sbjct: 129 RYDSSLGLLTKKFINLIKQAEDGI--LDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTL 186
Query: 82 KNLYSWQGFDA 92
KN W+G D
Sbjct: 187 KNRIQWKGLDV 197
>sp|Q16254|E2F4_HUMAN Transcription factor E2F4 OS=Homo sapiens GN=E2F4 PE=1 SV=2
Length = 413
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 23 SRKEKSLGLLCSKFLKLYN--RDGVESIGLDDAASRLGV-ERRRIYDVVNILESIGVVAR 79
SR EKSLGLL +KF+ L +DGV + L AA L V ++RRIYD+ N+LE IG++ +
Sbjct: 16 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKL--AADTLAVRQKRRIYDITNVLEGIGLIEK 73
Query: 80 QAKNLYSWQGF 90
++KN W+G
Sbjct: 74 KSKNSIQWKGV 84
>sp|Q8R0K9|E2F4_MOUSE Transcription factor E2F4 OS=Mus musculus GN=E2f4 PE=2 SV=1
Length = 410
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 23 SRKEKSLGLLCSKFLKLYN--RDGVESIGLDDAASRLGV-ERRRIYDVVNILESIGVVAR 79
SR EKSLGLL +KF+ L +DGV + L AA L V ++RRIYD+ N+LE IG++ +
Sbjct: 16 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKL--AADTLAVRQKRRIYDITNVLEGIGLIEK 73
Query: 80 QAKNLYSWQGF 90
++KN W+G
Sbjct: 74 KSKNSIQWKGV 84
>sp|Q61502|E2F5_MOUSE Transcription factor E2F5 OS=Mus musculus GN=E2f5 PE=2 SV=2
Length = 335
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 23 SRKEKSLGLLCSKFLKLYN--RDGVESIGLDDAASRLGV-ERRRIYDVVNILESIGVVAR 79
SR EKSLGLL +KF+ L +DGV + L AA L V ++RRIYD+ N+LE I ++ +
Sbjct: 39 SRHEKSLGLLTTKFVSLLQEAQDGV--LDLKAAADTLAVRQKRRIYDITNVLEGIDLIEK 96
Query: 80 QAKNLYSWQGFDA 92
++KN W+G A
Sbjct: 97 KSKNSIQWKGVGA 109
>sp|Q15329|E2F5_HUMAN Transcription factor E2F5 OS=Homo sapiens GN=E2F5 PE=1 SV=1
Length = 346
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 23 SRKEKSLGLLCSKFLKLYN--RDGVESIGLDDAASRLGV-ERRRIYDVVNILESIGVVAR 79
SR EKSLGLL +KF+ L +DGV + L AA L V ++RRIYD+ N+LE I ++ +
Sbjct: 49 SRHEKSLGLLTTKFVSLLQEAKDGV--LDLKAAADTLAVRQKRRIYDITNVLEGIDLIEK 106
Query: 80 QAKNLYSWQGFDA 92
++KN W+G A
Sbjct: 107 KSKNSIQWKGVGA 119
>sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA PE=1 SV=1
Length = 485
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 24 RKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQAKN 83
R + SLGLL KF+ L + + L+ AA L V++RRIYD+ N+LE I ++ + KN
Sbjct: 167 RYDSSLGLLTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPFKN 226
Query: 84 LYSWQGFDAIP 94
W+G DA P
Sbjct: 227 RILWKGVDACP 237
>sp|Q62814|E2F5_RAT Transcription factor E2F5 (Fragment) OS=Rattus norvegicus GN=E2f5
PE=2 SV=1
Length = 300
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 23 SRKEKSLGLLCSKFLKLYN--RDGVESIGLDDAASRLGV-ERRRIYDVVNILESIGVVAR 79
SR EKSLGLL +KF+ L +DGV + L AA L V ++RRIYD+ N+LE I ++ +
Sbjct: 4 SRHEKSLGLLTTKFVSLLQEAQDGV--LDLKAAADTLAVRQKRRIYDITNVLEGIDLIEK 61
Query: 80 QAKNLYSWQGFDA 92
++KN W+G A
Sbjct: 62 KSKNSIQWKGVGA 74
>sp|Q9FV70|E2FC_ARATH Transcription factor E2FC OS=Arabidopsis thaliana GN=E2FC PE=1 SV=1
Length = 396
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 17 DGKQFYSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGV 76
+G R + SLGLL KF+KL ++ L+ A L V++RRIYD+ N+LE IG+
Sbjct: 148 NGASINCRYDSSLGLLTKKFVKLIQEAEDGTLDLNYCAVVLEVQKRRIYDITNVLEGIGL 207
Query: 77 VARQAKNLYSWQGFD 91
+ + KN W+G D
Sbjct: 208 IEKTTKNHIRWKGAD 222
>sp|Q01094|E2F1_HUMAN Transcription factor E2F1 OS=Homo sapiens GN=E2F1 PE=1 SV=1
Length = 437
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 23 SRKEKSLGLLCSKFLKL--YNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
SR E SL L +FL+L ++ DGV + L+ AA L V++RRIYD+ N+LE I ++A++
Sbjct: 126 SRYETSLNLTTKRFLELLSHSADGV--VDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKK 183
Query: 81 AKNLYSWQG----------FDAIPEALEVLKEEGLRENFNINGCTNSGNVLNDNENEGST 130
+KN W G + + + L L+E + + +N CT +L+++ +
Sbjct: 184 SKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRL 243
Query: 131 CTVT 134
VT
Sbjct: 244 AYVT 247
>sp|O35261|E2F3_MOUSE Transcription factor E2F3 OS=Mus musculus GN=E2f3 PE=1 SV=2
Length = 457
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 23 SRKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
+R + SLGLL KF++L ++ DGV + L+ AA L V++RRIYD+ N+LE I ++ ++
Sbjct: 169 TRYDTSLGLLTKKFIQLLSQSPDGV--LDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKK 226
Query: 81 AKNLYSWQG 89
+KN W G
Sbjct: 227 SKNNVQWMG 235
>sp|O00716|E2F3_HUMAN Transcription factor E2F3 OS=Homo sapiens GN=E2F3 PE=1 SV=1
Length = 465
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 23 SRKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
+R + SLGLL KF++L ++ DGV + L+ AA L V++RRIYD+ N+LE I ++ ++
Sbjct: 177 TRYDTSLGLLTKKFIQLLSQSPDGV--LDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKK 234
Query: 81 AKNLYSWQG 89
+KN W G
Sbjct: 235 SKNNVQWMG 243
>sp|Q27368|E2F_DROME Transcription factor E2f OS=Drosophila melanogaster GN=E2f PE=1
SV=2
Length = 805
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 24 RKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQA 81
R + SLG+L KF+ L DGV + L++A++RL V++RRIYD+ N+LE I ++ +++
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGV--VDLNEASNRLHVQKRRIYDITNVLEGINILEKKS 311
Query: 82 KNLYSWQ 88
KN W+
Sbjct: 312 KNNIQWR 318
>sp|Q61501|E2F1_MOUSE Transcription factor E2F1 OS=Mus musculus GN=E2f1 PE=1 SV=1
Length = 430
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 23 SRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQAK 82
SR E SL L +FL+L +R + L+ AA L V++RRIYD+ N+LE I ++A+++K
Sbjct: 121 SRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSK 180
Query: 83 NLYSWQG 89
N W G
Sbjct: 181 NHIQWLG 187
>sp|Q14209|E2F2_HUMAN Transcription factor E2F2 OS=Homo sapiens GN=E2F2 PE=1 SV=1
Length = 437
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 23 SRKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
+R + SLGLL KF+ L + DGV + L+ AA L V++RRIYD+ N+LE I ++ ++
Sbjct: 128 TRYDTSLGLLTKKFIYLLSESEDGV--LDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKK 185
Query: 81 AKNLYSWQG 89
AKN W G
Sbjct: 186 AKNNIQWVG 194
>sp|P56931|E2F2_MOUSE Transcription factor E2F2 OS=Mus musculus GN=E2f2 PE=1 SV=2
Length = 443
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 23 SRKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
+R + SLGLL KF+ L + DGV + L+ AA L V++RRIYD+ N+LE I ++ ++
Sbjct: 130 TRYDTSLGLLTKKFIYLLSESEDGV--LDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKK 187
Query: 81 AKNLYSWQG 89
+KN W G
Sbjct: 188 SKNNIQWVG 196
>sp|Q90977|E2F1_CHICK Transcription factor E2F1 OS=Gallus gallus GN=E2F1 PE=2 SV=1
Length = 403
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 23 SRKEKSLGLLCSKFLKLYNR--DGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQ 80
SR E SL L +FL+L ++ DGV + L+ AA L V++RRIYD+ N+LE I ++ ++
Sbjct: 103 SRYETSLNLTTKRFLELLSQSPDGV--VDLNWAAEVLKVQKRRIYDITNVLEGIQLITKK 160
Query: 81 AKNLYSWQG 89
+KN W G
Sbjct: 161 SKNNIQWLG 169
>sp|Q08DY6|E2F6_BOVIN Transcription factor E2F6 OS=Bos taurus GN=E2F6 PE=2 SV=1
Length = 285
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 28 SLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQAKNLYSW 87
SL L KF+ L + L+ A++LGV +RR+YD+ N+L+ I +V +++KN W
Sbjct: 67 SLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKSKNHIRW 126
Query: 88 QG-----FDAIPE 95
G F A+P+
Sbjct: 127 IGSDLSNFGAVPQ 139
>sp|O75461|E2F6_HUMAN Transcription factor E2F6 OS=Homo sapiens GN=E2F6 PE=1 SV=1
Length = 281
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 24 RKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQAKN 83
R + SL L KF+ L + L+ A++LGV +RR+YD+ N+L+ I +V +++KN
Sbjct: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKSKN 122
Query: 84 LYSWQG-----FDAIPE 95
W G F A+P+
Sbjct: 123 HIRWIGSDLSNFGAVPQ 139
>sp|O54917|E2F6_MOUSE Transcription factor E2F6 OS=Mus musculus GN=E2f6 PE=1 SV=2
Length = 272
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 28 SLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVARQAKNLYSW 87
SL L KF+ L + L+ A++LGV +RR+YD+ N+L+ I +V +++KN W
Sbjct: 67 SLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIELVEKKSKNHIRW 126
Query: 88 QGFD 91
G D
Sbjct: 127 IGSD 130
>sp|O77051|E2F2_DROME Transcription factor E2F2 OS=Drosophila melanogaster GN=E2f2 PE=1
SV=1
Length = 370
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 24 RKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVVAR-QAK 82
R SL LL KF+ L + SI L A L V++RRIYD+ N+LE IG++ + +
Sbjct: 73 RSVGSLVLLTQKFVDLV-KANEGSIDLKAATKILDVQKRRIYDITNVLEGIGLIDKGRHC 131
Query: 83 NLYSWQG 89
+L W+G
Sbjct: 132 SLVRWRG 138
>sp|O09139|E2F1_RAT Transcription factor E2F1 (Fragment) OS=Rattus norvegicus GN=E2f1
PE=1 SV=1
Length = 38
Score = 34.3 bits (77), Expect = 1.6, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 36 FLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILE 72
FL+L + + L+ AA L V++RRIYD+ N+LE
Sbjct: 1 FLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLE 37
>sp|Q47LZ9|SECA1_THEFY Protein translocase subunit SecA 1 OS=Thermobifida fusca (strain
YX) GN=secA1 PE=3 SV=2
Length = 968
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 61 RRRIYDVVNILESIGVVARQAKNL---YSWQGFDAIPEALEVLKEEGLRENFNINGCTNS 117
R +Y++ + E IG+ A +N Y +G+D E LE +KEE +R FN+ N
Sbjct: 775 REHLYEMDYLQEGIGLRAMAQRNPLIEYQREGYDMFQEMLEGIKEESIRFLFNVEVRVNQ 834
>sp|Q24318|TFDP_DROME Transcription factor Dp OS=Drosophila melanogaster GN=Dp PE=1 SV=2
Length = 445
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 61 RRRIYDVVNILESIGVVARQAKNLYSWQGFDA-IPEALEVLKEE 103
RRR+YD +N+L +I V+++ K + W G A E L+EE
Sbjct: 216 RRRVYDALNVLMAINVISKDKKEI-RWIGLPANSTETFLALEEE 258
>sp|B9M170|MURD_GEOSF UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Geobacter sp.
(strain FRC-32) GN=murD PE=3 SV=1
Length = 453
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 21 FYSRKEKSLGLLCSKFLKLYNRDGVESIGLDDAASRLGVERRRIYDVVNILESIGVV--- 77
F RKE + G+ CSK + +Y G E + D AA +L + ++++ NI+ ++
Sbjct: 239 FSQRKELAEGIFCSKGIIVYRWQGSE-LRFDTAAFKL----KGVHNIENIMAALASTLLS 293
Query: 78 -ARQAKNLYSWQGFDAIPEALEVLKEEGLRENFNINGCTNSGNVLNDNEN-EGSTCTVTD 135
A K + + F + +E ++E G + + TN G+V+ E+ + +
Sbjct: 294 GADPIKAGRAVESFKGLRHRMEFIREVGGVAYYEDSKGTNVGSVVKSLESFDKGITLIAG 353
Query: 136 GQDSSSS-----KIESKREKSLWLLTQ 157
G+D S + +R K L L+ +
Sbjct: 354 GKDKGGSYAPLADLVRERVKHLILIGE 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,787,647
Number of Sequences: 539616
Number of extensions: 5593350
Number of successful extensions: 14749
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 14579
Number of HSP's gapped (non-prelim): 124
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)