Query 018796
Match_columns 350
No_of_seqs 178 out of 1583
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 04:06:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018796.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018796hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-106 5E-111 780.0 25.5 300 23-330 20-324 (324)
2 cd00693 secretory_peroxidase H 100.0 8E-100 2E-104 732.1 25.2 298 27-329 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2.3E-71 5.1E-76 517.6 10.7 229 44-294 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.5E-68 3.3E-73 510.2 21.2 232 42-327 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.9E-66 8.3E-71 488.1 19.8 230 39-315 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 2.1E-64 4.6E-69 474.9 21.4 232 30-315 3-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 5.8E-62 1.3E-66 457.8 21.2 221 41-315 17-248 (251)
8 cd00692 ligninase Ligninase an 100.0 8.1E-62 1.8E-66 471.5 21.6 239 40-333 16-290 (328)
9 cd00314 plant_peroxidase_like 100.0 9.1E-59 2E-63 438.3 17.4 224 43-311 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 3.5E-55 7.6E-60 431.7 20.3 274 27-320 28-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 5.1E-53 1.1E-57 439.9 20.9 272 28-320 39-408 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.7E-49 3.8E-54 411.4 20.8 273 28-320 41-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 3.6E-49 7.9E-54 371.1 10.6 214 49-311 32-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 4.9E-38 1.1E-42 299.2 17.3 221 46-313 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 5.8E-33 1.2E-37 290.0 16.1 221 43-314 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.4E-32 5.1E-37 284.0 17.9 220 46-313 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.2E-30 2.5E-35 260.7 16.9 255 43-313 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.2 6.7E-11 1.4E-15 119.8 12.8 216 46-313 452-725 (730)
19 PF07172 GRP: Glycine rich pro 77.4 1.4 3E-05 36.0 1.6 18 1-18 1-18 (95)
20 PTZ00411 transaldolase-like pr 46.5 92 0.002 31.1 8.0 49 138-186 180-231 (333)
21 PF11895 DUF3415: Domain of un 44.0 20 0.00043 28.5 2.3 31 297-331 2-32 (80)
22 COG3763 Uncharacterized protei 31.3 1E+02 0.0022 24.0 4.3 28 43-70 24-51 (71)
23 KOG0400 40S ribosomal protein 24.2 53 0.0011 28.6 1.9 34 169-203 31-65 (151)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=2.5e-106 Score=779.96 Aligned_cols=300 Identities=44% Similarity=0.784 Sum_probs=284.2
Q ss_pred ccccCCCcccccCCChhHHHHHHHHHHHHHHhCcCcchhhhhhhhccccccCCCcceeccCCCCcccccccCCCCCchhh
Q 018796 23 PAQAQLSPSFYNSTCPNVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDNTTTIVSEKFAAPNNNSARG 102 (350)
Q Consensus 23 ~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSiLld~~~~~~~E~~~~~N~~~~~g 102 (350)
.++++|+++||++|||++|+||+++|++.+.++|+++|++|||+||||||+||||||||+++ ..||++++|. +++|
T Consensus 20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~G 95 (324)
T PLN03030 20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRG 95 (324)
T ss_pred chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-Ccch
Confidence 34567999999999999999999999999999999999999999999999999999999964 3799999998 8999
Q ss_pred HHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcC
Q 018796 103 FEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVG 182 (350)
Q Consensus 103 f~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 182 (350)
|++|+.||++||++||++|||||||+|||||||+++|||.|+|++||||+++|.+.++. +||.|+.++++|++.|+++|
T Consensus 96 f~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~G 174 (324)
T PLN03030 96 YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKG 174 (324)
T ss_pred HHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999877664 89999999999999999999
Q ss_pred CCCCccceeeccccccccccccccccccccCCCCC-CCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHH
Q 018796 183 LNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTG-NPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFF 261 (350)
Q Consensus 183 l~~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~ 261 (350)
|+.+ |||+||||||||++||.+|.+|||||+|++ .+||+||+.|+..|+..||..+++.+.+++|+.||.+|||+||+
T Consensus 175 l~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 253 (324)
T PLN03030 175 LNTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFS 253 (324)
T ss_pred CCHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHH
Confidence 9999 999999999999999999999999999875 58999999999999999996433334678999999999999999
Q ss_pred HhhhcccccccchhhhcCChhhHHHHHHHhhhcH----HHHHHHHHHHHHHhhcCCCCCCccccccccccccc
Q 018796 262 NLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQ----TAFFENFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 330 (350)
Q Consensus 262 ~l~~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 330 (350)
||++++|+|+|||+|++|+ +|+++|++||.|+ +.|+++|++||+|||+|+|+||.+||||++|+.+|
T Consensus 254 nll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 254 NLKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.2e-100 Score=732.13 Aligned_cols=298 Identities=56% Similarity=0.946 Sum_probs=287.7
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHhCcCcchhhhhhhhccccccCCCcceeccCCCCcccccccCCCCCchhhHHHH
Q 018796 27 QLSPSFYNSTCPNVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDNTTTIVSEKFAAPNNNSARGFEVV 106 (350)
Q Consensus 27 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I 106 (350)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||++++++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887788999999998 78999999
Q ss_pred HHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018796 107 DDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDN 186 (350)
Q Consensus 107 ~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 186 (350)
+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|+.++.+..+ ++||.|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877655 7899999999999999999999999
Q ss_pred ccceeeccccccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc
Q 018796 187 FDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIH 266 (350)
Q Consensus 187 ~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~ 266 (350)
|||||+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.||...++.+.+++|+.||.+|||+||++|+.+
T Consensus 159 -d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 159 -DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred -HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 9999999999999999999999999999989999999999999999999765556678999999999999999999999
Q ss_pred ccccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCCCCcccccccccccc
Q 018796 267 KGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPLTGNQGEIRLNCRRV 329 (350)
Q Consensus 267 ~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 329 (350)
+|+|+|||+|+.|+ +|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 238 ~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2.3e-71 Score=517.62 Aligned_cols=229 Identities=48% Similarity=0.842 Sum_probs=209.2
Q ss_pred HHHHHHHHHHhCcCcchhhhhhhhccccc-cCCCcceeccCCCCcccccccCCCCCchhhHHHHHHHHHHHHhhCCCCcC
Q 018796 44 IREVLQNAFLSDIRIGASLIRLHFHDCFV-NGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVS 122 (350)
Q Consensus 44 Vr~~v~~~~~~~~~~aa~lLRL~FHDcfv-~GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le~~cp~~VS 122 (350)
||++|++++..+++++|+||||+|||||+ +|||||||+. ..|+++++|.++.+++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 47999999995445999999999999999999999
Q ss_pred HHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeecccccccccc
Q 018796 123 CADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 202 (350)
Q Consensus 123 cADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLsGaHTiG~~h 202 (350)
|||||+||||+||+.+|||.|+|++||+|+.++.+.++ .+||.|+.++++|++.|+++||+++ |||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccccce
Confidence 99999999999999999999999999999999998777 7899999999999999999999999 999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhcccccccchhhhcCChh
Q 018796 203 CRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIHKGLLQSDQELFSTPGA 282 (350)
Q Consensus 203 c~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~~ 282 (350)
|.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||++|++++|+|+||++|++|+
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~-- 218 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDP-- 218 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHST--
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCH--
Confidence 99999 999 4 5799999999988 99 433333 77888 999999999999999999999999999999
Q ss_pred hHHHHHHHhhhc
Q 018796 283 DTAAIVNNFGRN 294 (350)
Q Consensus 283 ~t~~~V~~yA~d 294 (350)
+|+++|++||+|
T Consensus 219 ~t~~~V~~yA~d 230 (230)
T PF00141_consen 219 ETRPIVERYAQD 230 (230)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.5e-68 Score=510.24 Aligned_cols=232 Identities=28% Similarity=0.469 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHhCcCcchhhhhhhhcccc-------ccCCCcceeccCCCCcccccccCCCCCchhhHHHHHHHHHHHH
Q 018796 42 NIIREVLQNAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVE 114 (350)
Q Consensus 42 ~iVr~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le 114 (350)
+.++++|.+ +.++|.++|.+|||+||||| ++||||||++. +|+++++|.++.+||++|+.||+++
T Consensus 15 ~~~~~~~~~-~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLRA-LIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHHH-HHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 456677744 66789999999999999999 89999999984 6999999984447999999999987
Q ss_pred hhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeecc
Q 018796 115 RACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSG 194 (350)
Q Consensus 115 ~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLsG 194 (350)
++|||||||+||||+||+.+|||.|+|++||+|++++++ +++||+|+.+++++++.|+++||+++ |||||+|
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~VaLsG 158 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDK-DIVALSG 158 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHH-HHhhhcc
Confidence 489999999999999999999999999999999999863 46899999999999999999999999 9999999
Q ss_pred ccccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc--ccc--c
Q 018796 195 AHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIH--KGL--L 270 (350)
Q Consensus 195 aHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~--~gl--L 270 (350)
|||||++||. |+ +|.|. +..||.+|||+||++|+.+ +|+ |
T Consensus 159 AHTiG~ahc~----r~-g~~g~-------------------------------~~~Tp~~FDN~Yy~~ll~~~~~gll~L 202 (289)
T PLN02608 159 GHTLGRAHPE----RS-GFDGP-------------------------------WTKEPLKFDNSYFVELLKGESEGLLKL 202 (289)
T ss_pred cccccccccc----CC-CCCCC-------------------------------CCCCCCccChHHHHHHHcCCcCCcccc
Confidence 9999999995 54 43221 1268999999999999998 788 7
Q ss_pred ccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCCCCcccccccccc
Q 018796 271 QSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPLTGNQGEIRLNCR 327 (350)
Q Consensus 271 ~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 327 (350)
+|||+|+.|+ +|+++|+.||.||+.|+++|++||+||++|+|+||++||+.+.-+
T Consensus 203 ~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 203 PTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999 999999999999999999999999999999999999999988654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.9e-66 Score=488.06 Aligned_cols=230 Identities=25% Similarity=0.390 Sum_probs=208.9
Q ss_pred hHHHHHHHHHHHHHHhCcCcchhhhhhhhccccccCCCcceeccC---CCCcccccccCCCCCchhhHHHHHHHHHHHHh
Q 018796 39 NVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDN---TTTIVSEKFAAPNNNSARGFEVVDDMKAAVER 115 (350)
Q Consensus 39 ~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSiLld~---~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le~ 115 (350)
..++||+++|++.+. +|+++|++|||+||||| +||+|+++++ +..+.+|+++++|.++.+||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 99999999999999999 4888887754 333457999999985559999999999986
Q ss_pred hCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeeccc
Q 018796 116 ACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGA 195 (350)
Q Consensus 116 ~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLsGa 195 (350)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++ |||||+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777778899999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhccc-------
Q 018796 196 HTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIHKG------- 268 (350)
Q Consensus 196 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~~g------- 268 (350)
||||++||.. ++|.|. |..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 115899999999999999999
Q ss_pred -ccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCC
Q 018796 269 -LLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPL 315 (350)
Q Consensus 269 -lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (350)
+|+||++|+.|+ +|+++|+.||.|+++|+++|++||+||++++|.
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999 999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.1e-64 Score=474.89 Aligned_cols=232 Identities=28% Similarity=0.491 Sum_probs=207.8
Q ss_pred cccccC--CChhHHHHHHHHHHHHHHhCcCcchhhhhhhhc-----ccccc--CCCcceeccCCCCcccccccCCCCCch
Q 018796 30 PSFYNS--TCPNVANIIREVLQNAFLSDIRIGASLIRLHFH-----DCFVN--GCDASILLDNTTTIVSEKFAAPNNNSA 100 (350)
Q Consensus 30 ~~fY~~--sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FH-----Dcfv~--GcDgSiLld~~~~~~~E~~~~~N~~~~ 100 (350)
.+||.. -|+.+++.+++.+++.+ .+|+++|.||||+|| ||+++ ||||||.. .+|+++++|.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 356654 38899999999999988 689999999999999 88887 99999943 4799999998656
Q ss_pred hhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHH
Q 018796 101 RGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRN 180 (350)
Q Consensus 101 ~gf~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 180 (350)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 9999999999997 589999999999999999999999999999999999864 46799999999999999997
Q ss_pred -cCCCCCccceeeccccccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHH
Q 018796 181 -VGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKY 259 (350)
Q Consensus 181 -~Gl~~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Y 259 (350)
+||+++ |||||+||||||++|| .|+ +|.|. +..||.+|||+|
T Consensus 148 ~~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~-------------------------------~~~tp~~fDn~Y 190 (250)
T PLN02364 148 QMGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA-------------------------------WTSNPLIFDNSY 190 (250)
T ss_pred hcCCCHH-HheeeecceeeccccC----CCC-CCCCC-------------------------------CCCCCCccchHH
Confidence 599999 9999999999999999 354 33221 116899999999
Q ss_pred HHHhhhc--ccccc--cchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCC
Q 018796 260 FFNLQIH--KGLLQ--SDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPL 315 (350)
Q Consensus 260 y~~l~~~--~glL~--SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (350)
|++|+.+ +|+|. ||++|+.|+ +|+.+|+.||.|++.|+++|++||+||++|++-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89876 999999999 999999999999999999999999999999973
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=5.8e-62 Score=457.79 Aligned_cols=221 Identities=28% Similarity=0.467 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHhCcCcchhhhhhhhccccc-------cCCCcceeccCCCCcccccccCCCCCchhhHHHHHHHHHHH
Q 018796 41 ANIIREVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAV 113 (350)
Q Consensus 41 e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~l 113 (350)
.+-+++.+.+.+. +...+|.+|||+||||.+ +||||||.+. .|+++++|.++..++++|++||+++
T Consensus 17 ~~~~~~~~~~~~~-~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLIA-EKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHHh-CCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc
Confidence 3456777888764 579999999999999964 7999999753 6999999996555999999999997
Q ss_pred HhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeec
Q 018796 114 ERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS 193 (350)
Q Consensus 114 e~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLs 193 (350)
++|||||||+||||+||+.+|||.|+|++||+|+..+.+ +++||.|+.++++|++.|+++||+++ |||||+
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlVALs 160 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDK-DIVALS 160 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHH-HHeeee
Confidence 489999999999999999999999999999999998854 56899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc--ccc--
Q 018796 194 GAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIH--KGL-- 269 (350)
Q Consensus 194 GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~--~gl-- 269 (350)
||||||++||. | ++|.|. .| .||.+|||+||++|+.+ +|+
T Consensus 161 GaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~ 204 (251)
T PLN02879 161 GGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQ 204 (251)
T ss_pred ccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCcc
Confidence 99999999995 3 343321 12 68999999999999999 888
Q ss_pred cccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCC
Q 018796 270 LQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPL 315 (350)
Q Consensus 270 L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (350)
|+||++|+.|+ +|+++|++||.||++|+++|++||+||++||+.
T Consensus 205 L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 205 LPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred chhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 67999999999 999999999999999999999999999999974
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.1e-62 Score=471.49 Aligned_cols=239 Identities=28% Similarity=0.395 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHhCcC---cchhhhhhhhccccc------------cCCCcceeccCCCCcccccccCCCCCchhhHH
Q 018796 40 VANIIREVLQNAFLSDIR---IGASLIRLHFHDCFV------------NGCDASILLDNTTTIVSEKFAAPNNNSARGFE 104 (350)
Q Consensus 40 ~e~iVr~~v~~~~~~~~~---~aa~lLRL~FHDcfv------------~GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~ 104 (350)
+|..|+++|++.+..+.. .|+.+|||+||||++ +|||||||++.+ .|+++++|. +++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 588999999999986544 566799999999996 799999999853 699999998 555 8
Q ss_pred HHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhh-cCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCC
Q 018796 105 VVDDMKAAVERACPGVVSCADILTIAAEQSVAL-SGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGL 183 (350)
Q Consensus 105 ~I~~iK~~le~~cp~~VScADilalAar~aV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 183 (350)
+|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 59999999999999999864 45899999999999999999999
Q ss_pred CCCccceeeccccccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHh
Q 018796 184 NDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNL 263 (350)
Q Consensus 184 ~~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l 263 (350)
+++ |||+|+||||||++|. +||+++ .+++| .||.+|||+||+|+
T Consensus 163 ~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 163 SPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHH
Confidence 999 9999999999999982 366664 13567 69999999999998
Q ss_pred h-hccc-------------------ccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCCCCCCcccccc
Q 018796 264 Q-IHKG-------------------LLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLKPLTGNQGEIR 323 (350)
Q Consensus 264 ~-~~~g-------------------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR 323 (350)
+ .+++ +|+||++|+.|+ +|+.+|++||.||++|+++|++||+||++|||.. ..+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~----~~l 280 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN----ISL 280 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc----chh
Confidence 7 4555 499999999999 9999999999999999999999999999999873 478
Q ss_pred cccccccCCC
Q 018796 324 LNCRRVNGNS 333 (350)
Q Consensus 324 ~~C~~~n~~~ 333 (350)
.+|+.|++.+
T Consensus 281 ~dcs~v~p~~ 290 (328)
T cd00692 281 TDCSDVIPPP 290 (328)
T ss_pred ccCcccCCCC
Confidence 8999999553
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=9.1e-59 Score=438.26 Aligned_cols=224 Identities=33% Similarity=0.513 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHhCcCcchhhhhhhhcccccc--------CCCcceeccCCCCcccccccCCCCCchhhHHHHHHHHHHHH
Q 018796 43 IIREVLQNAFLSDIRIGASLIRLHFHDCFVN--------GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVE 114 (350)
Q Consensus 43 iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~--------GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le 114 (350)
.|++.|++.+.+++.+++++|||+||||+++ ||||||+++ +|+++++|.++.+++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999997 999999997 39999999977799999999999999
Q ss_pred hhCCCCcCHHHHHHHhhhhHhhhc--CCCCccccCCCCCCCCcc--ccccccCCCCCCCCHHHHHHHHHHcCCCCCccce
Q 018796 115 RACPGVVSCADILTIAAEQSVALS--GGPSWTNLLGRRDSRTAN--RTLANENLPGPNNSLERLKDRFRNVGLNDNFDLV 190 (350)
Q Consensus 115 ~~cp~~VScADilalAar~aV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~V 190 (350)
. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|.++||+++ |||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~-e~V 152 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS-ELV 152 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-HHH
Confidence 8 899999999999999999999 999999999999999764 333456788888899999999999999999 999
Q ss_pred eec-ccccc-ccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhcc-
Q 018796 191 ALS-GAHTF-GRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIHK- 267 (350)
Q Consensus 191 aLs-GaHTi-G~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~~- 267 (350)
||+ |+||| |++||..+..|+ | .+|..||.+|||+||++|+.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCc
Confidence 999 99999 999998877664 2 1355799999999999999998
Q ss_pred ---------------cccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhc
Q 018796 268 ---------------GLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGN 311 (350)
Q Consensus 268 ---------------glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (350)
++|+||+.|+.|+ +|+.+|+.||.|+++|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 8999999999999 99999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3.5e-55 Score=431.74 Aligned_cols=274 Identities=21% Similarity=0.330 Sum_probs=233.9
Q ss_pred CCCccc-ccCCChhH-HHHHHHHHHHHHHhC--------cCcchhhhhhhhccccc-------cCCC-cceeccCCCCcc
Q 018796 27 QLSPSF-YNSTCPNV-ANIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDNTTTIV 88 (350)
Q Consensus 27 ~L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSiLld~~~~~~ 88 (350)
.+-.+| |.+.+-.. .+.|+++|++.+... ...+|.+|||+|||+.+ +|++ |+|.+.
T Consensus 28 p~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------ 101 (409)
T cd00649 28 PMGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------ 101 (409)
T ss_pred CCCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------
Confidence 344444 44444333 268899999999864 37999999999999986 5775 677554
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCcccc----------
Q 018796 89 SEKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRT---------- 158 (350)
Q Consensus 89 ~E~~~~~N~~~~~gf~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~---------- 158 (350)
+|++++.|.++.+++.+++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 102 pe~~~~~N~gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~ 177 (409)
T cd00649 102 PLNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWL 177 (409)
T ss_pred cccCcHhhhhHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcc
Confidence 7999999998888999999999987 45799999999999999999999999999999999754320
Q ss_pred -------------------------cccc--CCCCCCCCHHHHHHHHHHcCCCCCccceee-cccccccccccccccccc
Q 018796 159 -------------------------LANE--NLPGPNNSLERLKDRFRNVGLNDNFDLVAL-SGAHTFGRAQCRTFSDRL 210 (350)
Q Consensus 159 -------------------------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaL-sGaHTiG~~hc~~f~~Rl 210 (350)
.+++ .||+|..++.+|++.|.+|||+++ ||||| +||||||++||..|.+||
T Consensus 178 ~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rl 256 (409)
T cd00649 178 ADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHV 256 (409)
T ss_pred cccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccC
Confidence 0123 699999999999999999999999 99999 599999999999999998
Q ss_pred ccCCCCCCCCCCcCHHHHHHHH--hhCCCCCC-CCcccccC---CCCCcccChHHHHHhhh-------------------
Q 018796 211 FNFNSTGNPDPTLNTTLLQQLR--QLCPQGGN-GSVLTNLD---VTTPDVFDNKYFFNLQI------------------- 265 (350)
Q Consensus 211 ~~f~g~~~~dp~~d~~~~~~L~--~~Cp~~~~-~~~~~~~d---~~Tp~~FDN~Yy~~l~~------------------- 265 (350)
. +||.+++.|++.|+ ..||...+ +..++.+| ..||.+|||+||++|+.
T Consensus 257 g-------~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~ 329 (409)
T cd00649 257 G-------PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKN 329 (409)
T ss_pred C-------CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccC
Confidence 2 69999999999996 89997533 33455677 57999999999999998
Q ss_pred -----------------cccccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHh--hcCCCCCCccc
Q 018796 266 -----------------HKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRM--GNLKPLTGNQG 320 (350)
Q Consensus 266 -----------------~~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 320 (350)
++|||+||++|+.|+ +|+++|++||.|+++|+++|++||+|| +.+|+++--.|
T Consensus 330 ~~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 330 AAGENTVPDAHDPSKKHAPMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred ccccccCCCccccccccCcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 569999999999999 999999999999999999999999999 68999886555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=5.1e-53 Score=439.87 Aligned_cols=272 Identities=22% Similarity=0.319 Sum_probs=229.6
Q ss_pred CCccc-ccCCChhH-HHHHHHHHHHHHHhC--------cCcchhhhhhhhccccc-------cCC-CcceeccCCCCccc
Q 018796 28 LSPSF-YNSTCPNV-ANIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGC-DASILLDNTTTIVS 89 (350)
Q Consensus 28 L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~Gc-DgSiLld~~~~~~~ 89 (350)
+-.+| |.+.+-+. .+.||++|++.+... ...+|.+|||+||++.+ +|| .|+|.+ .+
T Consensus 39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~P 112 (716)
T TIGR00198 39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------AP 112 (716)
T ss_pred CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------cc
Confidence 44444 44444322 247999999999864 36999999999999987 576 466655 47
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCcc-------------
Q 018796 90 EKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTAN------------- 156 (350)
Q Consensus 90 E~~~~~N~~~~~gf~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~------------- 156 (350)
|++++.|.++.+++.+++.||++ ||++|||||||+||+++|||.+|||.|+|.+||+|+..+.
T Consensus 113 ~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~ 188 (716)
T TIGR00198 113 LNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLT 188 (716)
T ss_pred ccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhh
Confidence 99999999888899999999986 8999999999999999999999999999999999994321
Q ss_pred ------------------------ccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeec-cccccccccccccccccc
Q 018796 157 ------------------------RTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRLF 211 (350)
Q Consensus 157 ------------------------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLs-GaHTiG~~hc~~f~~Rl~ 211 (350)
+.. ...+|+|..++.+|++.|.+||||++ |||||+ ||||||++||.+|.+||
T Consensus 189 ~~~~~~~~l~~p~a~~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl- 265 (716)
T TIGR00198 189 SSREDRESLENPLAATEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI- 265 (716)
T ss_pred ccccccccccccchhhhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC-
Confidence 111 22699999999999999999999999 999996 99999999999999998
Q ss_pred cCCCCCCCCCCcCHHHHHHHHhhCCCCC---CCCcccccC---CCCCcccChHHHHHhhhc-------------------
Q 018796 212 NFNSTGNPDPTLNTTLLQQLRQLCPQGG---NGSVLTNLD---VTTPDVFDNKYFFNLQIH------------------- 266 (350)
Q Consensus 212 ~f~g~~~~dp~~d~~~~~~L~~~Cp~~~---~~~~~~~~d---~~Tp~~FDN~Yy~~l~~~------------------- 266 (350)
++||++++.|++.|+..||.+. .+..++.+| ..||.+|||+||+||+.+
T Consensus 266 ------g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~ 339 (716)
T TIGR00198 266 ------GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDA 339 (716)
T ss_pred ------CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccc
Confidence 2799999999999999998532 223356677 579999999999999975
Q ss_pred ---------------ccccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhh--cCCCCCCccc
Q 018796 267 ---------------KGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMG--NLKPLTGNQG 320 (350)
Q Consensus 267 ---------------~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 320 (350)
.++|+||++|..|+ +|+++|++||.|++.|+++|++||+||+ .+|++.-.-|
T Consensus 340 ~~~~p~~~~~~~~~~~~mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y~g 408 (716)
T TIGR00198 340 PEIIPDVEDPNKKHNPIMLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRYIG 408 (716)
T ss_pred ccccccccccccccccCccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhhcC
Confidence 68999999999999 9999999999999999999999999999 5666554333
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.7e-49 Score=411.41 Aligned_cols=273 Identities=21% Similarity=0.335 Sum_probs=229.5
Q ss_pred CCccc-ccCCChhH-HHHHHHHHHHHHHhC--------cCcchhhhhhhhccccc-------cCCC-cceeccCCCCccc
Q 018796 28 LSPSF-YNSTCPNV-ANIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDNTTTIVS 89 (350)
Q Consensus 28 L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSiLld~~~~~~~ 89 (350)
+-.+| |.+-+-.. .+.||++|.+.+... ...+|.+|||+||++.+ +||+ |+|.+ .+
T Consensus 41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~p 114 (726)
T PRK15061 41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------AP 114 (726)
T ss_pred CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cc
Confidence 44444 44444332 257999999999864 37999999999999987 5775 66654 47
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCcccc-----------
Q 018796 90 EKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRT----------- 158 (350)
Q Consensus 90 E~~~~~N~~~~~gf~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~----------- 158 (350)
|++++.|.++.+++.++++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 115 e~~w~~N~gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~ 190 (726)
T PRK15061 115 LNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLG 190 (726)
T ss_pred cccchhhhhHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccc
Confidence 999999998889999999999987 45799999999999999999999999999999998644321
Q ss_pred ---------------------------ccccCCCCCCCCHHHHHHHHHHcCCCCCccceeec-ccccccccccccccccc
Q 018796 159 ---------------------------LANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRL 210 (350)
Q Consensus 159 ---------------------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLs-GaHTiG~~hc~~f~~Rl 210 (350)
+-...+|+|..++.+|++.|.+|||+++ |||||+ ||||||++||..|.+||
T Consensus 191 ~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 191 GDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred cccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc
Confidence 0012379999999999999999999999 999995 99999999999999998
Q ss_pred ccCCCCCCCCCCcCHHHHHHHH--hhCCCCCC-CCcccccC---CCCCcccChHHHHHhhhc------------------
Q 018796 211 FNFNSTGNPDPTLNTTLLQQLR--QLCPQGGN-GSVLTNLD---VTTPDVFDNKYFFNLQIH------------------ 266 (350)
Q Consensus 211 ~~f~g~~~~dp~~d~~~~~~L~--~~Cp~~~~-~~~~~~~d---~~Tp~~FDN~Yy~~l~~~------------------ 266 (350)
.+||.+++.+++.|. +.||.+.+ +..+..+| ..||.+|||+||++|+.+
T Consensus 270 -------gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~ 342 (726)
T PRK15061 270 -------GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKD 342 (726)
T ss_pred -------CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccC
Confidence 279999999999985 89997433 33455677 579999999999999985
Q ss_pred ------------------ccccccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhh--cCCCCCCccc
Q 018796 267 ------------------KGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMG--NLKPLTGNQG 320 (350)
Q Consensus 267 ------------------~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 320 (350)
.+||+||++|..|| +++++|++||.|+++|+++|++||+||+ .+|+++---|
T Consensus 343 ~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 343 GAAEDTVPDAHDPSKKHAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccCCcccccccccCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999 9999999999999999999999999994 4777664444
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=3.6e-49 Score=371.15 Aligned_cols=214 Identities=25% Similarity=0.324 Sum_probs=175.9
Q ss_pred HHHHHhCcCcchhhhhhhhcccc-------ccCCCcceeccCCCCcccccc-cCCCCCchhhHHHHHHHHHHHHhhCCCC
Q 018796 49 QNAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDNTTTIVSEKF-AAPNNNSARGFEVVDDMKAAVERACPGV 120 (350)
Q Consensus 49 ~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSiLld~~~~~~~E~~-~~~N~~~~~gf~~I~~iK~~le~~cp~~ 120 (350)
......++++++.||||+||||| ++||||||+++.. .+|+. .+.|. ++++|+.|+.+ +
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~----------~ 97 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP----------R 97 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC----------c
Confidence 33445789999999999999999 8899999999742 46777 44454 67888877553 6
Q ss_pred cCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCCCccceeecc-ccccc
Q 018796 121 VSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSG-AHTFG 199 (350)
Q Consensus 121 VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLsG-aHTiG 199 (350)
|||||||+||+|+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|+++||+++ |||+|+| |||||
T Consensus 98 VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~-DmVaLsggaHTiG 172 (264)
T cd08201 98 SSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTS-EMIALVACGHTLG 172 (264)
T ss_pred cCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChH-HHheeecCCeeee
Confidence 99999999999999999999999999999999988753 499999999999999999999999 9999995 99999
Q ss_pred cccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhccc----------c
Q 018796 200 RAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDVFDNKYFFNLQIHKG----------L 269 (350)
Q Consensus 200 ~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~FDN~Yy~~l~~~~g----------l 269 (350)
++||..|.+++- |.. ..+...++| .||.+|||+||.+++.+.. -
T Consensus 173 ~ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~ 226 (264)
T cd08201 173 GVHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNT 226 (264)
T ss_pred ecccccchhhcC---------Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCC
Confidence 999998876641 100 000123456 6999999999999998752 3
Q ss_pred cccchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhc
Q 018796 270 LQSDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGN 311 (350)
Q Consensus 270 L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (350)
++||..+++.. . ...++.+| ++..|.+.++..+.||++
T Consensus 227 ~~sd~r~f~~d--~-n~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 227 TNSDLRIFSSD--G-NVTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred ccchhhheecC--c-cHHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 67999999754 1 34567777 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=4.9e-38 Score=299.21 Aligned_cols=221 Identities=19% Similarity=0.261 Sum_probs=178.9
Q ss_pred HHHHHHHHhCcCcchhhhhhhhccccc-------cCCCcc-eeccCCCCcccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018796 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIVSEKFAAPNNN--SARGFEVVDDMKAAVER 115 (350)
Q Consensus 46 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-iLld~~~~~~~E~~~~~N~~--~~~gf~~I~~iK~~le~ 115 (350)
+.+++.+....-..+.+|||+||++.+ +|++|+ |.+ .+|++++.|.+ +.+.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 566777777778899999999999986 688888 544 47999999997 67899999999999842
Q ss_pred h-CCC-CcCHHHHHHHhhhhHhhhcCC-----CCccccCCCCCCCCcccccc--ccCCCCCC------------CCHHHH
Q 018796 116 A-CPG-VVSCADILTIAAEQSVALSGG-----PSWTNLLGRRDSRTANRTLA--NENLPGPN------------NSLERL 174 (350)
Q Consensus 116 ~-cp~-~VScADilalAar~aV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 174 (350)
. -++ .||+||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 2 122 699999999999999999999 99999999999987643211 11345332 134789
Q ss_pred HHHHHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCc
Q 018796 175 KDRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPD 253 (350)
Q Consensus 175 ~~~F~~~Gl~~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~ 253 (350)
++.|.++||+++ |||||+||| ++|..|..+ +.| . +..+|.
T Consensus 171 rd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~------wT~~p~ 211 (297)
T cd08200 171 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------V------FTDRPG 211 (297)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------C------CcCCCC
Confidence 999999999999 999999997 799887532 111 1 226899
Q ss_pred ccChHHHHHhhhcc--------------------c-----ccccchhhhcCChhhHHHHHHHhhhc--HHHHHHHHHHHH
Q 018796 254 VFDNKYFFNLQIHK--------------------G-----LLQSDQELFSTPGADTAAIVNNFGRN--QTAFFENFVTSM 306 (350)
Q Consensus 254 ~FDN~Yy~~l~~~~--------------------g-----lL~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am 306 (350)
+|||.||+||+... | .+.+|..|.+|+ +.|++|+.||.| ++.||+||++||
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~~A~ 289 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFVAAW 289 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 99999999999520 1 267899999999 999999999998 999999999999
Q ss_pred HHhhcCC
Q 018796 307 IRMGNLK 313 (350)
Q Consensus 307 ~Km~~lg 313 (350)
.||.++.
T Consensus 290 ~Klmeld 296 (297)
T cd08200 290 TKVMNLD 296 (297)
T ss_pred HHHHhcC
Confidence 9999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=5.8e-33 Score=289.97 Aligned_cols=221 Identities=20% Similarity=0.259 Sum_probs=175.2
Q ss_pred HHHHHHHHH---HHhCcCcchhhhhhhhccccc-------cCCCcc-eeccCCCCcccccccCCC--CCchhhHHHHHHH
Q 018796 43 IIREVLQNA---FLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIVSEKFAAPN--NNSARGFEVVDDM 109 (350)
Q Consensus 43 iVr~~v~~~---~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-iLld~~~~~~~E~~~~~N--~~~~~gf~~I~~i 109 (350)
+|+++|.++ +....-..+.|||++||++.+ +|++|+ |.|. +|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 345555553 445556779999999999986 699988 6554 79999999 7677899999999
Q ss_pred HHHHHhhCCCCcCHHHHHHHhhhhHhhhc---CCC--CccccCCCCCCCCccccccccCCC---CC------------CC
Q 018796 110 KAAVERACPGVVSCADILTIAAEQSVALS---GGP--SWTNLLGRRDSRTANRTLANENLP---GP------------NN 169 (350)
Q Consensus 110 K~~le~~cp~~VScADilalAar~aV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p------------~~ 169 (350)
|++... +.||.||+|+||+..|||.+ ||| .|++.+||.|.+.... ++++..| .+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998742 27999999999999999998 898 5789999999987642 2222222 11 12
Q ss_pred CHHHHHHHHHHcCCCCCccceeeccc-cccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccC
Q 018796 170 SLERLKDRFRNVGLNDNFDLVALSGA-HTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLD 248 (350)
Q Consensus 170 ~~~~l~~~F~~~Gl~~~~e~VaLsGa-HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d 248 (350)
....|++.|.++||+++ |||||+|| |++|+.|..++ .| . .
T Consensus 579 ~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s~-------~G-------------------------~------~ 619 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGSK-------HG-------------------------V------F 619 (716)
T ss_pred HHHHHHHHHHhCCCChH-HHHheecchhhccccCCCCC-------CC-------------------------C------C
Confidence 35678899999999999 99999999 59999985321 11 1 1
Q ss_pred CCCCcccChHHHHHhhhcc--------------------c---cc--ccchhhhcCChhhHHHHHHHhhhcH--HHHHHH
Q 018796 249 VTTPDVFDNKYFFNLQIHK--------------------G---LL--QSDQELFSTPGADTAAIVNNFGRNQ--TAFFEN 301 (350)
Q Consensus 249 ~~Tp~~FDN~Yy~~l~~~~--------------------g---lL--~SD~~L~~d~~~~t~~~V~~yA~d~--~~F~~~ 301 (350)
..+|.+|||.||+||+... | ++ .+|..|.+|+ +.|++|+.||.|+ +.|++|
T Consensus 620 T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 620 TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchHHHH
Confidence 2579999999999999621 1 22 6799999999 9999999999997 899999
Q ss_pred HHHHHHHhhcCCC
Q 018796 302 FVTSMIRMGNLKP 314 (350)
Q Consensus 302 Fa~Am~Km~~lgv 314 (350)
|++||.|+.+++-
T Consensus 698 F~~Aw~Klm~ldr 710 (716)
T TIGR00198 698 FVAAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.4e-32 Score=284.04 Aligned_cols=220 Identities=20% Similarity=0.262 Sum_probs=179.0
Q ss_pred HHHHHHHHhCcCcchhhhhhhhccccc-------cCCCcc-eeccCCCCcccccccCCCC--CchhhHHHHHHHHHHHHh
Q 018796 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIVSEKFAAPNN--NSARGFEVVDDMKAAVER 115 (350)
Q Consensus 46 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-iLld~~~~~~~E~~~~~N~--~~~~gf~~I~~iK~~le~ 115 (350)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. ++.+.+.+++.||++.+.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 566666776667789999999999986 699888 7664 799999998 677889999999999864
Q ss_pred hCC--CCcCHHHHHHHhhhhHhhhc---CC--CCccccCCCCCCCCccccccc---cCCCCCC------------CCHHH
Q 018796 116 ACP--GVVSCADILTIAAEQSVALS---GG--PSWTNLLGRRDSRTANRTLAN---ENLPGPN------------NSLER 173 (350)
Q Consensus 116 ~cp--~~VScADilalAar~aV~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 173 (350)
.-. ..||.||+|+||+..|||.+ || |.|++.+||.|.+.... +++ ..+|.+. ...+.
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 322 26999999999999999998 68 99999999999987543 222 2456543 13478
Q ss_pred HHHHHHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCC
Q 018796 174 LKDRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTP 252 (350)
Q Consensus 174 l~~~F~~~Gl~~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp 252 (350)
|++.|.++||+++ |||||+||| ++|..|-.++ .| . ...+|
T Consensus 595 L~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S~-------~G-------------------------~------~T~~p 635 (726)
T PRK15061 595 LVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGSK-------HG-------------------------V------FTDRP 635 (726)
T ss_pred HHHHHHhCCCChH-HHhheecchhhcccCCCCCC-------CC-------------------------C------CcCCC
Confidence 9999999999999 999999997 7888874321 01 1 12579
Q ss_pred cccChHHHHHhhhcc--------------------c---c--cccchhhhcCChhhHHHHHHHhhhc--HHHHHHHHHHH
Q 018796 253 DVFDNKYFFNLQIHK--------------------G---L--LQSDQELFSTPGADTAAIVNNFGRN--QTAFFENFVTS 305 (350)
Q Consensus 253 ~~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~A 305 (350)
.+|||.||+||+... | + +.+|..|.+|+ +.|++|+.||.| ++.|++||++|
T Consensus 636 ~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~~A 713 (726)
T PRK15061 636 GVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFVAA 713 (726)
T ss_pred CccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHHHH
Confidence 999999999999520 1 1 46899999999 999999999998 99999999999
Q ss_pred HHHhhcCC
Q 018796 306 MIRMGNLK 313 (350)
Q Consensus 306 m~Km~~lg 313 (350)
|.|+.+++
T Consensus 714 w~Kvmeld 721 (726)
T PRK15061 714 WTKVMNLD 721 (726)
T ss_pred HHHHHhCC
Confidence 99999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.2e-30 Score=260.69 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHhC--------cCcchhhhhhhhcccccc----CCCcceeccCCCCcccccccCCCCCchhhHHHHHHHH
Q 018796 43 IIREVLQNAFLSD--------IRIGASLIRLHFHDCFVN----GCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMK 110 (350)
Q Consensus 43 iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv~----GcDgSiLld~~~~~~~E~~~~~N~~~~~gf~~I~~iK 110 (350)
.|+..+...+... ...+|.+|||+||-++++ |--|+- .+..+|.++.++|.|.++.+++.++.+||
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~--~G~qRFaPlnSWPDN~nLDKarRLLWPIK 148 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAG--GGQQRFAPLNSWPDNANLDKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCC--CCceecccccCCCcccchHHHHHHhhhHh
Confidence 5666777766654 258899999999999873 111111 13456788999999998899999999999
Q ss_pred HHHHhhCCCCcCHHHHHHHhhhhHhhhcCCCCccccCCCCCCCCcccc--------------------------------
Q 018796 111 AAVERACPGVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRT-------------------------------- 158 (350)
Q Consensus 111 ~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------------- 158 (350)
+++ +..||+||+|+|++..|++.+|++++.+..||.|--.+...
T Consensus 149 kKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGL 224 (730)
T COG0376 149 KKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGL 224 (730)
T ss_pred Hhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeee
Confidence 986 66999999999999999999999999999999997665430
Q ss_pred -----ccccCCCCCCCCHHHHHHHHHHcCCCCCccceeec-cccccccccccccccccccCCCCCCCCCCcCHHHHHHHH
Q 018796 159 -----LANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLR 232 (350)
Q Consensus 159 -----~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~e~VaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~ 232 (350)
+-++..|+|..+..+++..|++|+|+++ |.|||+ ||||+|++|...-.+. -+++|.-.+--.+.|-
T Consensus 225 IYVNPEGpng~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~-------vg~ePe~a~ie~qGlG 296 (730)
T COG0376 225 IYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASN-------VGPEPEAAPIEQQGLG 296 (730)
T ss_pred EEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhh-------cCCCccccchhhhccc
Confidence 1124589999999999999999999999 999999 6999999997642222 2367766665666554
Q ss_pred h--hCCCCCC-CCccc---ccCCCCCcccChHHHHHhhhc-----------------------------------ccccc
Q 018796 233 Q--LCPQGGN-GSVLT---NLDVTTPDVFDNKYFFNLQIH-----------------------------------KGLLQ 271 (350)
Q Consensus 233 ~--~Cp~~~~-~~~~~---~~d~~Tp~~FDN~Yy~~l~~~-----------------------------------~glL~ 271 (350)
. .|-.+.+ +..+. ..+..||++|||+||.+|+.. ..||+
T Consensus 297 W~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mlt 376 (730)
T COG0376 297 WANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLT 376 (730)
T ss_pred cccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeec
Confidence 3 3433322 22222 235679999999999999853 15899
Q ss_pred cchhhhcCChhhHHHHHHHhhhcHHHHHHHHHHHHHHhhcCC
Q 018796 272 SDQELFSTPGADTAAIVNNFGRNQTAFFENFVTSMIRMGNLK 313 (350)
Q Consensus 272 SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 313 (350)
+|.+|--|| ..++|.++|..|++.|.+.|++||.||.+-+
T Consensus 377 tDlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 377 TDLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred cchhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 999999999 9999999999999999999999999998754
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.24 E-value=6.7e-11 Score=119.81 Aligned_cols=216 Identities=21% Similarity=0.295 Sum_probs=150.6
Q ss_pred HHHHHHHHhCcCcchhhhhhhhccccc-------cCCCcc-eeccCCCCcccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018796 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIVSEKFAAPNNN--SARGFEVVDDMKAAVER 115 (350)
Q Consensus 46 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-iLld~~~~~~~E~~~~~N~~--~~~gf~~I~~iK~~le~ 115 (350)
..++..+....-....|+-.+|-.+-+ +|.+|- |.|. +.++++.|.. +.+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 455556666666677888888887754 455543 4444 5789999963 3357888888888876
Q ss_pred hCCCCcCHHHHHHHhhhhHhhhc---CCCCc--cccCCCCCCCCcccccccc--CC-CCC------------CCCHHHHH
Q 018796 116 ACPGVVSCADILTIAAEQSVALS---GGPSW--TNLLGRRDSRTANRTLANE--NL-PGP------------NNSLERLK 175 (350)
Q Consensus 116 ~cp~~VScADilalAar~aV~~~---GGP~~--~v~~GR~D~~~s~~~~~~~--~l-P~p------------~~~~~~l~ 175 (350)
..||.||+|+|++..+||.+ +|-.+ |+.+||.|........ +. .| |-. ...-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv-~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDV-ESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcch-hhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 47999999999999999984 67654 5678999987654321 11 01 211 11234466
Q ss_pred HHHHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCCcccccCCCCCcc
Q 018796 176 DRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDV 254 (350)
Q Consensus 176 ~~F~~~Gl~~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~Tp~~ 254 (350)
+.=+..+||.. ||++|+||- -+|.- |.|+ ...|..| .|.+
T Consensus 601 DkAqlL~Ltap-emtVLiGGlRvLg~n-----------~g~s-------------------------~~GVfT~--~pg~ 641 (730)
T COG0376 601 DKAQLLTLTAP-EMTVLIGGLRVLGAN-----------YGGS-------------------------KHGVFTD--RPGV 641 (730)
T ss_pred HHHHHhccCCc-cceEEEcceEeeccC-----------CCCC-------------------------ccceecc--Cccc
Confidence 88888999999 999999874 33322 2111 1223333 5788
Q ss_pred cChHHHHHhhhc----------c----------cc-----cccchhhhcCChhhHHHHHHHhhhc--HHHHHHHHHHHHH
Q 018796 255 FDNKYFFNLQIH----------K----------GL-----LQSDQELFSTPGADTAAIVNNFGRN--QTAFFENFVTSMI 307 (350)
Q Consensus 255 FDN~Yy~~l~~~----------~----------gl-----L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 307 (350)
+.|.||.||+.- + |- -..|..+-+++ ..|.+.+.||.| ++.|.+||+.||.
T Consensus 642 LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaaw~ 719 (730)
T COG0376 642 LTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAAWT 719 (730)
T ss_pred ccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 888888888852 1 21 24677777788 999999999975 7889999999999
Q ss_pred HhhcCC
Q 018796 308 RMGNLK 313 (350)
Q Consensus 308 Km~~lg 313 (350)
|..++.
T Consensus 720 kVMn~D 725 (730)
T COG0376 720 KVMNLD 725 (730)
T ss_pred HHhccc
Confidence 998875
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=77.37 E-value=1.4 Score=36.04 Aligned_cols=18 Identities=50% Similarity=0.656 Sum_probs=11.9
Q ss_pred CcchHHHHHHHHHHHHHh
Q 018796 1 MASLRFLLAAALVVAFVL 18 (350)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (350)
|||..++|+++++++++|
T Consensus 1 MaSK~~llL~l~LA~lLl 18 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLL 18 (95)
T ss_pred CchhHHHHHHHHHHHHHH
Confidence 897777666666555544
No 20
>PTZ00411 transaldolase-like protein; Provisional
Probab=46.45 E-value=92 Score=31.13 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=29.2
Q ss_pred cCCCCccccCCCCCCCCccccccccCCCC---CCCCHHHHHHHHHHcCCCCC
Q 018796 138 SGGPSWTNLLGRRDSRTANRTLANENLPG---PNNSLERLKDRFRNVGLNDN 186 (350)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~---p~~~~~~l~~~F~~~Gl~~~ 186 (350)
+|-..+..++||-+-..-.+.......+. +-..+.++.+.|++.|+..+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~ 231 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTI 231 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeE
Confidence 47778899999985432211111111121 12357788889999998664
No 21
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=43.97 E-value=20 Score=28.49 Aligned_cols=31 Identities=16% Similarity=0.215 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcccccccccccccC
Q 018796 297 AFFENFVTSMIRMGNLKPLTGNQGEIRLNCRRVNG 331 (350)
Q Consensus 297 ~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~ 331 (350)
....+|..||.||+.||-... ---+|+.|-+
T Consensus 2 ~m~~~F~~am~KlavLG~d~~----~LiDCSdVIP 32 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDRS----DLIDCSDVIP 32 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-GG----GSEE-GGGS-
T ss_pred hHHHHHHHHHHHHHHhcCChh----hcccchhhcc
Confidence 356889999999999985432 2348998873
No 22
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.27 E-value=1e+02 Score=23.99 Aligned_cols=28 Identities=18% Similarity=0.358 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCcCcchhhhhhhhccc
Q 018796 43 IIREVLQNAFLSDIRIGASLIRLHFHDC 70 (350)
Q Consensus 43 iVr~~v~~~~~~~~~~aa~lLRL~FHDc 70 (350)
|.|+.+.+.++++|.+-...||+.+---
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8999999999999999999999998444
No 23
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=24.21 E-value=53 Score=28.64 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHcCCCCCccc-eeeccccccccccc
Q 018796 169 NSLERLKDRFRNVGLNDNFDL-VALSGAHTFGRAQC 203 (350)
Q Consensus 169 ~~~~~l~~~F~~~Gl~~~~e~-VaLsGaHTiG~~hc 203 (350)
+++.+.+-.|+++||++. ++ |.|--+|-||+++-
T Consensus 31 ddvkeqI~K~akKGltps-qIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPS-QIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHcCCChh-HceeeeecccCcchhhe
Confidence 345666678999999998 76 55558999998863
Done!