Query 018797
Match_columns 350
No_of_seqs 251 out of 1414
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 04:06:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018797.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018797hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02580 trehalose-phosphatase 100.0 1.8E-61 3.8E-66 465.2 32.7 317 19-336 59-383 (384)
2 PLN03017 trehalose-phosphatase 100.0 9.2E-61 2E-65 456.5 30.6 307 21-336 59-365 (366)
3 PLN02151 trehalose-phosphatase 100.0 8.9E-59 1.9E-63 441.6 30.3 301 20-337 52-352 (354)
4 PRK10187 trehalose-6-phosphate 100.0 4.7E-39 1E-43 300.1 28.1 233 72-334 13-248 (266)
5 PF02358 Trehalose_PPase: Treh 100.0 1.6E-39 3.6E-44 298.0 16.0 225 77-320 1-235 (235)
6 TIGR00685 T6PP trehalose-phosp 100.0 3.7E-37 8.1E-42 284.0 26.9 236 71-330 1-243 (244)
7 COG1877 OtsB Trehalose-6-phosp 100.0 7.3E-37 1.6E-41 281.6 24.7 239 69-333 14-255 (266)
8 PRK14501 putative bifunctional 100.0 1.3E-34 2.9E-39 304.4 28.8 240 61-331 479-725 (726)
9 PLN02205 alpha,alpha-trehalose 100.0 3.9E-34 8.5E-39 301.9 27.3 244 63-333 585-848 (854)
10 PLN03063 alpha,alpha-trehalose 100.0 2.2E-33 4.7E-38 295.9 30.2 254 61-335 494-789 (797)
11 PLN03064 alpha,alpha-trehalose 100.0 1.2E-32 2.6E-37 289.9 29.7 256 61-335 578-932 (934)
12 COG0561 Cof Predicted hydrolas 100.0 3.3E-31 7.1E-36 246.7 19.8 224 72-331 2-262 (264)
13 PRK10976 putative hydrolase; P 100.0 4.6E-31 1E-35 245.9 20.5 240 73-330 2-264 (266)
14 PRK15126 thiamin pyrimidine py 100.0 4.9E-31 1.1E-35 246.7 19.3 247 73-338 2-270 (272)
15 PRK10513 sugar phosphate phosp 100.0 7.4E-31 1.6E-35 244.9 20.4 238 73-330 3-268 (270)
16 PRK03669 mannosyl-3-phosphogly 100.0 5.1E-30 1.1E-34 239.9 22.7 227 71-332 5-270 (271)
17 PRK01158 phosphoglycolate phos 100.0 4.9E-30 1.1E-34 233.7 19.9 214 73-330 3-229 (230)
18 PLN02887 hydrolase family prot 100.0 2.7E-29 5.8E-34 255.1 18.4 247 67-330 302-579 (580)
19 PF08282 Hydrolase_3: haloacid 100.0 2E-28 4.4E-33 223.4 19.7 211 76-326 1-254 (254)
20 TIGR01484 HAD-SF-IIB HAD-super 100.0 3.6E-29 7.8E-34 224.1 13.3 200 75-303 1-204 (204)
21 PRK10530 pyridoxal phosphate ( 100.0 8.1E-28 1.7E-32 224.3 19.8 239 73-330 3-271 (272)
22 TIGR01485 SPP_plant-cyano sucr 100.0 9E-28 1.9E-32 222.0 18.3 227 73-329 1-246 (249)
23 TIGR01482 SPP-subfamily Sucros 100.0 3.8E-28 8.3E-33 220.3 15.1 212 76-329 1-224 (225)
24 TIGR01487 SPP-like sucrose-pho 100.0 8.1E-28 1.7E-32 217.4 16.7 207 74-326 2-215 (215)
25 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 7.2E-27 1.6E-31 216.8 21.3 220 75-330 1-256 (256)
26 TIGR02471 sucr_syn_bact_C sucr 100.0 2.1E-27 4.6E-32 217.7 16.4 216 75-329 1-234 (236)
27 TIGR00099 Cof-subfamily Cof su 100.0 2.9E-27 6.3E-32 219.2 16.9 232 75-326 1-256 (256)
28 PRK00192 mannosyl-3-phosphogly 99.9 8.5E-26 1.8E-30 211.6 19.5 232 73-331 4-271 (273)
29 PLN02382 probable sucrose-phos 99.9 5E-25 1.1E-29 217.2 19.7 233 70-334 6-264 (413)
30 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.2E-24 2.6E-29 197.3 19.4 194 75-303 1-220 (221)
31 PTZ00174 phosphomannomutase; P 99.9 2.2E-24 4.7E-29 199.4 18.0 204 71-308 3-235 (247)
32 PLN02423 phosphomannomutase 99.9 1.4E-23 3E-28 193.7 20.5 210 71-330 5-244 (245)
33 KOG1050 Trehalose-6-phosphate 99.9 3.9E-23 8.4E-28 213.3 23.1 229 63-327 492-731 (732)
34 PF05116 S6PP: Sucrose-6F-phos 99.9 5E-24 1.1E-28 196.8 13.3 219 72-329 1-245 (247)
35 PRK14502 bifunctional mannosyl 99.9 5.5E-22 1.2E-26 201.6 24.5 232 71-330 414-690 (694)
36 TIGR02461 osmo_MPG_phos mannos 99.9 5.4E-22 1.2E-26 180.9 15.6 203 75-304 1-225 (225)
37 PRK12702 mannosyl-3-phosphogly 99.9 3.4E-21 7.5E-26 178.6 19.3 205 73-306 1-254 (302)
38 KOG1050 Trehalose-6-phosphate 99.7 1.9E-22 4.1E-27 208.2 -22.4 324 24-349 135-479 (732)
39 COG3769 Predicted hydrolase (H 99.6 7.8E-15 1.7E-19 129.1 16.1 206 72-307 6-238 (274)
40 KOG3189 Phosphomannomutase [Li 99.5 3.7E-13 8E-18 116.7 16.3 216 69-331 7-251 (252)
41 PF03332 PMM: Eukaryotic phosp 99.4 6.7E-12 1.5E-16 111.8 13.0 191 100-331 1-220 (220)
42 TIGR02468 sucrsPsyn_pln sucros 99.4 1.3E-11 2.8E-16 132.0 15.6 187 72-292 769-994 (1050)
43 TIGR01670 YrbI-phosphatas 3-de 99.2 7.3E-11 1.6E-15 101.3 9.0 72 254-333 76-152 (154)
44 PRK09484 3-deoxy-D-manno-octul 99.1 1.5E-10 3.3E-15 102.2 7.7 56 254-317 96-153 (183)
45 PRK11133 serB phosphoserine ph 99.0 1.1E-10 2.3E-15 111.9 2.7 67 252-327 246-316 (322)
46 cd01427 HAD_like Haloacid deha 98.9 8.3E-09 1.8E-13 84.3 8.0 55 75-129 1-59 (139)
47 smart00775 LNS2 LNS2 domain. T 98.8 1.4E-08 3E-13 87.5 6.6 74 75-148 1-92 (157)
48 COG0560 SerB Phosphoserine pho 98.7 9.8E-08 2.1E-12 86.3 9.5 47 252-306 142-188 (212)
49 TIGR02726 phenyl_P_delta pheny 98.5 5.1E-08 1.1E-12 84.9 3.5 70 254-331 82-156 (169)
50 COG1778 Low specificity phosph 98.4 2E-07 4.4E-12 78.6 2.3 72 252-331 81-157 (170)
51 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 8.1E-06 1.8E-10 75.6 13.1 65 74-144 2-75 (249)
52 TIGR01689 EcbF-BcbF capsule bi 98.3 1.4E-06 3.1E-11 72.0 5.7 52 74-125 2-55 (126)
53 TIGR01684 viral_ppase viral ph 98.3 1.9E-06 4E-11 80.7 6.7 72 71-145 124-201 (301)
54 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.2 4.4E-05 9.6E-10 71.0 15.5 64 255-326 181-254 (257)
55 PHA03398 viral phosphatase sup 97.9 2.2E-05 4.8E-10 73.6 6.6 71 71-146 126-204 (303)
56 TIGR01672 AphA HAD superfamily 97.4 0.00042 9.2E-09 63.7 7.4 68 53-120 42-140 (237)
57 TIGR01681 HAD-SF-IIIC HAD-supe 97.4 0.00033 7.2E-09 58.0 5.3 56 74-129 1-65 (128)
58 TIGR01662 HAD-SF-IIIA HAD-supe 97.3 0.00023 5E-09 58.8 3.7 56 74-129 1-68 (132)
59 TIGR01525 ATPase-IB_hvy heavy 97.3 0.0017 3.8E-08 67.0 10.5 59 69-129 360-420 (556)
60 PRK10444 UMP phosphatase; Prov 97.2 0.00034 7.3E-09 64.8 4.5 49 74-128 2-51 (248)
61 TIGR01664 DNA-3'-Pase DNA 3'-p 97.2 0.00069 1.5E-08 58.8 5.9 50 72-121 12-69 (166)
62 TIGR00338 serB phosphoserine p 97.1 0.00035 7.5E-09 62.8 3.0 58 254-319 152-210 (219)
63 TIGR01452 PGP_euk phosphoglyco 97.1 0.00052 1.1E-08 64.5 4.3 44 73-122 2-46 (279)
64 PLN02645 phosphoglycolate phos 96.9 0.00078 1.7E-08 64.4 4.1 65 255-327 232-308 (311)
65 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.9 0.0011 2.3E-08 58.5 4.5 47 253-307 146-192 (201)
66 PRK13222 phosphoglycolate phos 96.8 0.003 6.6E-08 56.7 6.4 67 254-328 150-223 (226)
67 TIGR00213 GmhB_yaeD D,D-heptos 96.7 0.0012 2.6E-08 57.7 2.9 61 255-323 108-175 (176)
68 TIGR01488 HAD-SF-IB Haloacid D 96.7 0.0011 2.5E-08 57.1 2.5 41 248-292 137-177 (177)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.7 0.0023 4.9E-08 56.7 4.5 46 252-305 153-198 (202)
70 PRK11009 aphA acid phosphatase 96.6 0.0045 9.7E-08 56.9 6.5 34 53-86 42-76 (237)
71 TIGR01511 ATPase-IB1_Cu copper 96.6 0.0073 1.6E-07 62.5 8.3 62 254-327 454-519 (562)
72 PRK10671 copA copper exporting 96.6 0.0029 6.3E-08 68.5 5.5 68 245-327 694-765 (834)
73 COG1778 Low specificity phosph 96.6 0.0032 6.9E-08 53.5 4.4 59 71-129 6-70 (170)
74 TIGR01116 ATPase-IIA1_Ca sarco 96.5 0.0037 8E-08 68.3 5.5 61 254-326 618-682 (917)
75 TIGR02137 HSK-PSP phosphoserin 96.5 0.0034 7.4E-08 56.3 4.3 66 252-329 130-198 (203)
76 PRK13582 thrH phosphoserine ph 96.4 0.0032 7E-08 55.8 4.1 51 275-330 146-199 (205)
77 PRK11033 zntA zinc/cadmium/mer 96.4 0.0015 3.3E-08 69.6 1.9 67 244-326 610-680 (741)
78 COG4087 Soluble P-type ATPase 96.3 0.0046 9.9E-08 51.0 4.0 61 261-329 84-149 (152)
79 PLN02954 phosphoserine phospha 96.3 0.0092 2E-07 53.7 6.4 67 252-326 153-223 (224)
80 TIGR01512 ATPase-IB2_Cd heavy 96.3 0.0062 1.4E-07 62.6 5.8 62 254-327 413-479 (536)
81 TIGR01497 kdpB K+-transporting 96.3 0.005 1.1E-07 64.7 4.9 69 244-327 489-561 (675)
82 TIGR01668 YqeG_hyp_ppase HAD s 96.3 0.012 2.6E-07 51.2 6.5 54 71-128 23-78 (170)
83 TIGR01656 Histidinol-ppas hist 96.2 0.0067 1.5E-07 51.3 4.5 47 75-121 2-54 (147)
84 PHA02530 pseT polynucleotide k 96.2 0.013 2.7E-07 55.4 6.8 59 71-129 156-222 (300)
85 TIGR01533 lipo_e_P4 5'-nucleot 96.1 0.013 2.7E-07 54.9 6.4 68 57-124 59-148 (266)
86 PF08645 PNK3P: Polynucleotide 96.1 0.0036 7.7E-08 54.0 2.4 44 74-117 1-52 (159)
87 smart00577 CPDc catalytic doma 96.1 0.0095 2.1E-07 50.5 5.0 58 72-129 1-79 (148)
88 PRK13225 phosphoglycolate phos 96.1 0.015 3.3E-07 54.5 6.7 70 254-331 196-272 (273)
89 PRK13223 phosphoglycolate phos 96.1 0.0098 2.1E-07 55.7 5.3 68 252-327 156-230 (272)
90 TIGR01652 ATPase-Plipid phosph 96.0 0.045 9.9E-07 60.9 11.2 61 244-318 748-811 (1057)
91 TIGR01454 AHBA_synth_RP 3-amin 96.0 0.014 3E-07 51.9 5.8 66 254-327 132-204 (205)
92 TIGR01460 HAD-SF-IIA Haloacid 95.9 0.0088 1.9E-07 54.8 4.4 47 76-128 1-51 (236)
93 COG2179 Predicted hydrolase of 95.9 0.027 5.9E-07 48.5 6.7 56 70-129 25-81 (175)
94 COG4030 Uncharacterized protei 95.9 0.03 6.5E-07 50.6 7.2 46 252-302 189-234 (315)
95 PF13344 Hydrolase_6: Haloacid 95.9 0.0069 1.5E-07 48.0 2.9 42 76-123 1-43 (101)
96 TIGR01449 PGP_bact 2-phosphogl 95.8 0.015 3.1E-07 51.8 5.1 64 254-325 142-212 (213)
97 PF09419 PGP_phosphatase: Mito 95.8 0.033 7.1E-07 48.4 7.0 47 69-119 37-86 (168)
98 PLN03190 aminophospholipid tra 95.8 0.15 3.3E-06 57.1 13.8 70 245-332 852-924 (1178)
99 PRK13288 pyrophosphatase PpaX; 95.7 0.019 4.1E-07 51.4 5.5 68 253-328 138-212 (214)
100 PF06437 ISN1: IMP-specific 5' 95.7 0.9 1.9E-05 44.2 16.9 199 71-282 145-378 (408)
101 PRK06769 hypothetical protein; 95.7 0.0091 2E-07 52.0 3.2 63 256-326 96-171 (173)
102 TIGR01663 PNK-3'Pase polynucle 95.7 0.018 3.9E-07 58.9 5.7 52 70-121 165-224 (526)
103 PRK13226 phosphoglycolate phos 95.7 0.019 4.2E-07 52.1 5.4 64 255-326 153-224 (229)
104 PRK08942 D,D-heptose 1,7-bisph 95.6 0.0087 1.9E-07 52.3 2.9 64 256-327 106-177 (181)
105 COG2217 ZntA Cation transport 95.6 0.018 3.9E-07 60.8 5.4 70 243-327 579-652 (713)
106 TIGR01261 hisB_Nterm histidino 95.6 0.0099 2.1E-07 51.3 2.9 35 255-292 105-139 (161)
107 TIGR02726 phenyl_P_delta pheny 95.5 0.017 3.6E-07 50.4 4.1 58 72-129 6-69 (169)
108 KOG0210 P-type ATPase [Inorgan 95.5 0.012 2.7E-07 60.6 3.6 65 253-326 767-832 (1051)
109 PRK05446 imidazole glycerol-ph 95.4 0.02 4.3E-07 55.7 4.9 48 72-119 1-55 (354)
110 COG0546 Gph Predicted phosphat 95.4 0.033 7.2E-07 50.3 6.0 68 255-327 147-218 (220)
111 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.3 0.026 5.7E-07 51.8 4.9 47 71-123 6-53 (242)
112 PF13242 Hydrolase_like: HAD-h 95.2 0.047 1E-06 40.5 5.3 56 257-320 8-73 (75)
113 PRK09552 mtnX 2-hydroxy-3-keto 95.1 0.029 6.4E-07 50.5 4.5 68 253-332 147-218 (219)
114 PLN02954 phosphoserine phospha 95.0 0.04 8.6E-07 49.5 5.3 33 97-129 86-119 (224)
115 TIGR01675 plant-AP plant acid 95.0 0.039 8.5E-07 50.4 5.1 53 71-123 75-149 (229)
116 PF08235 LNS2: LNS2 (Lipin/Ned 94.9 0.039 8.4E-07 47.4 4.5 51 75-125 1-58 (157)
117 TIGR00338 serB phosphoserine p 94.8 0.046 1E-06 49.0 5.1 32 97-128 87-119 (219)
118 PRK13582 thrH phosphoserine ph 94.8 0.038 8.2E-07 48.9 4.5 32 98-129 71-102 (205)
119 PF06888 Put_Phosphatase: Puta 94.8 0.038 8.3E-07 50.6 4.4 80 247-330 144-234 (234)
120 PTZ00445 p36-lilke protein; Pr 94.8 0.078 1.7E-06 47.6 6.2 65 57-122 26-103 (219)
121 PRK01122 potassium-transportin 94.7 0.041 8.9E-07 58.0 5.2 69 244-327 488-560 (679)
122 PRK09552 mtnX 2-hydroxy-3-keto 94.7 0.034 7.4E-07 50.1 4.0 15 73-87 3-17 (219)
123 TIGR01522 ATPase-IIA2_Ca golgi 94.7 0.05 1.1E-06 59.4 5.8 62 254-327 605-671 (884)
124 PF03031 NIF: NLI interacting 94.7 0.031 6.6E-07 47.7 3.4 56 74-129 1-70 (159)
125 TIGR01523 ATPase-IID_K-Na pota 94.6 0.043 9.4E-07 60.9 5.2 59 245-318 727-788 (1053)
126 PRK10826 2-deoxyglucose-6-phos 94.5 0.06 1.3E-06 48.5 5.0 61 254-322 149-215 (222)
127 TIGR01524 ATPase-IIIB_Mg magne 94.4 0.072 1.6E-06 58.0 6.2 61 243-318 582-644 (867)
128 PRK10517 magnesium-transportin 94.4 0.11 2.3E-06 56.9 7.6 62 242-318 616-679 (902)
129 PRK14010 potassium-transportin 94.4 0.046 1E-06 57.6 4.5 68 244-326 484-555 (673)
130 TIGR02137 HSK-PSP phosphoserin 94.4 0.052 1.1E-06 48.7 4.2 35 95-129 68-102 (203)
131 PRK08238 hypothetical protein; 94.3 0.11 2.3E-06 52.8 6.8 47 96-142 73-122 (479)
132 PRK13478 phosphonoacetaldehyde 94.3 0.12 2.6E-06 48.0 6.7 68 255-330 160-258 (267)
133 TIGR01491 HAD-SF-IB-PSPlk HAD- 94.3 0.096 2.1E-06 45.9 5.7 30 100-129 85-115 (201)
134 TIGR02250 FCP1_euk FCP1-like p 94.2 0.092 2E-06 45.1 5.3 60 70-129 3-92 (156)
135 TIGR01489 DKMTPPase-SF 2,3-dik 94.2 0.091 2E-06 45.5 5.4 37 249-292 145-181 (188)
136 TIGR03333 salvage_mtnX 2-hydro 94.2 0.076 1.6E-06 47.7 5.0 66 253-330 143-212 (214)
137 TIGR01106 ATPase-IIC_X-K sodiu 94.2 0.061 1.3E-06 59.5 5.1 53 254-318 671-726 (997)
138 PRK08942 D,D-heptose 1,7-bisph 94.1 0.15 3.1E-06 44.5 6.5 48 73-120 3-55 (181)
139 TIGR01488 HAD-SF-IB Haloacid D 94.1 0.075 1.6E-06 45.6 4.5 32 98-129 76-108 (177)
140 TIGR01517 ATPase-IIB_Ca plasma 94.1 0.068 1.5E-06 58.8 5.1 60 244-318 649-711 (941)
141 PF00702 Hydrolase: haloacid d 94.0 0.043 9.3E-07 48.5 2.9 33 257-292 182-214 (215)
142 TIGR01685 MDP-1 magnesium-depe 94.0 0.098 2.1E-06 45.8 5.0 57 73-129 2-81 (174)
143 TIGR01647 ATPase-IIIA_H plasma 93.9 0.1 2.2E-06 56.0 6.0 61 243-318 514-576 (755)
144 PRK15122 magnesium-transportin 93.9 0.099 2.1E-06 57.2 6.0 62 242-318 616-679 (903)
145 PF12710 HAD: haloacid dehalog 93.8 0.055 1.2E-06 47.0 3.3 33 254-290 157-192 (192)
146 PRK06769 hypothetical protein; 93.8 0.095 2.1E-06 45.6 4.6 50 72-121 3-55 (173)
147 TIGR01686 FkbH FkbH-like domai 93.7 0.16 3.4E-06 48.8 6.3 58 72-129 2-66 (320)
148 TIGR02245 HAD_IIID1 HAD-superf 93.6 0.12 2.5E-06 46.1 4.9 59 70-128 18-78 (195)
149 TIGR01456 CECR5 HAD-superfamil 93.6 0.14 3E-06 49.2 5.8 47 275-326 265-320 (321)
150 TIGR02251 HIF-SF_euk Dullard-l 93.5 0.12 2.7E-06 44.5 4.8 57 73-129 1-76 (162)
151 TIGR01657 P-ATPase-V P-type AT 93.2 0.12 2.6E-06 57.6 5.3 69 244-327 782-852 (1054)
152 PRK13225 phosphoglycolate phos 93.2 0.2 4.3E-06 47.1 6.0 21 66-86 55-75 (273)
153 COG0647 NagD Predicted sugar p 93.0 0.12 2.6E-06 48.4 4.2 44 72-121 7-51 (269)
154 TIGR01422 phosphonatase phosph 93.0 0.22 4.7E-06 45.8 5.9 64 255-326 158-252 (253)
155 TIGR03351 PhnX-like phosphonat 92.8 0.18 4E-06 45.0 5.1 65 254-326 146-219 (220)
156 PLN02575 haloacid dehalogenase 92.8 0.35 7.6E-06 47.6 7.2 74 254-335 273-351 (381)
157 PF03767 Acid_phosphat_B: HAD 92.6 0.036 7.8E-07 50.7 0.2 53 71-123 70-144 (229)
158 TIGR02254 YjjG/YfnB HAD superf 92.4 0.3 6.6E-06 43.5 6.0 65 254-326 153-224 (224)
159 TIGR01489 DKMTPPase-SF 2,3-dik 92.3 0.16 3.4E-06 44.0 3.8 15 73-87 1-15 (188)
160 PRK13222 phosphoglycolate phos 92.3 0.23 5.1E-06 44.4 5.0 16 72-87 5-20 (226)
161 TIGR03333 salvage_mtnX 2-hydro 92.2 0.17 3.7E-06 45.4 4.0 34 96-129 71-105 (214)
162 PRK11590 hypothetical protein; 92.1 0.19 4.1E-06 45.1 4.2 43 252-305 161-203 (211)
163 PRK11587 putative phosphatase; 91.9 0.38 8.3E-06 43.1 6.0 60 255-322 140-203 (218)
164 PRK14988 GMP/IMP nucleotidase; 91.8 0.33 7.1E-06 44.0 5.5 67 255-329 151-221 (224)
165 COG4359 Uncharacterized conser 91.8 0.37 7.9E-06 42.3 5.3 37 248-292 142-178 (220)
166 TIGR01545 YfhB_g-proteo haloac 91.7 0.21 4.5E-06 45.0 4.0 43 252-305 160-202 (210)
167 COG0637 Predicted phosphatase/ 91.6 0.35 7.5E-06 43.8 5.4 14 73-86 2-15 (221)
168 PRK09449 dUMP phosphatase; Pro 91.5 0.62 1.3E-05 41.7 7.0 64 256-327 153-223 (224)
169 PLN02770 haloacid dehalogenase 91.5 0.38 8.3E-06 44.2 5.6 60 254-321 165-230 (248)
170 TIGR01490 HAD-SF-IB-hyp1 HAD-s 91.5 0.3 6.5E-06 43.0 4.7 34 96-129 88-122 (202)
171 TIGR01680 Veg_Stor_Prot vegeta 91.1 0.26 5.7E-06 46.0 4.1 53 71-123 99-174 (275)
172 COG0241 HisB Histidinol phosph 91.1 0.18 3.9E-06 44.3 2.9 46 73-118 5-55 (181)
173 PLN02940 riboflavin kinase 90.5 0.45 9.8E-06 46.9 5.3 29 100-128 98-127 (382)
174 TIGR00213 GmhB_yaeD D,D-heptos 90.2 0.45 9.7E-06 41.3 4.5 48 74-121 2-53 (176)
175 PRK10725 fructose-1-P/6-phosph 90.0 0.18 4E-06 43.7 2.0 36 254-292 143-178 (188)
176 TIGR02253 CTE7 HAD superfamily 89.9 0.6 1.3E-05 41.6 5.3 60 255-322 152-220 (221)
177 PLN02779 haloacid dehalogenase 89.9 0.56 1.2E-05 44.2 5.2 60 255-322 204-268 (286)
178 PLN03243 haloacid dehalogenase 89.7 0.86 1.9E-05 42.4 6.3 64 255-326 167-234 (260)
179 PRK06698 bifunctional 5'-methy 89.6 0.86 1.9E-05 46.0 6.6 67 254-330 386-457 (459)
180 COG0474 MgtA Cation transport 89.4 0.27 5.8E-06 53.9 3.1 61 243-318 618-681 (917)
181 TIGR01548 HAD-SF-IA-hyp1 haloa 89.3 0.19 4.2E-06 44.3 1.5 32 256-290 164-195 (197)
182 PRK11587 putative phosphatase; 89.0 0.21 4.5E-06 44.9 1.5 29 73-110 3-31 (218)
183 PLN02575 haloacid dehalogenase 88.8 0.61 1.3E-05 45.9 4.8 17 70-86 128-144 (381)
184 TIGR02252 DREG-2 REG-2-like, H 88.8 0.28 6.1E-06 43.2 2.3 34 256-292 163-197 (203)
185 PRK13288 pyrophosphatase PpaX; 88.8 0.24 5.3E-06 44.1 1.8 14 73-86 3-16 (214)
186 KOG0207 Cation transport ATPas 88.7 0.83 1.8E-05 49.0 5.9 69 243-326 765-837 (951)
187 KOG0202 Ca2+ transporting ATPa 88.5 0.33 7.2E-06 51.5 2.8 60 244-318 658-720 (972)
188 TIGR01494 ATPase_P-type ATPase 88.4 0.19 4.2E-06 51.1 1.1 57 244-318 387-443 (499)
189 PRK10748 flavin mononucleotide 88.4 0.31 6.8E-06 44.5 2.3 63 255-325 165-237 (238)
190 COG4087 Soluble P-type ATPase 88.3 0.49 1.1E-05 39.3 3.1 49 76-130 17-65 (152)
191 TIGR02253 CTE7 HAD superfamily 88.3 0.65 1.4E-05 41.4 4.3 33 73-110 2-34 (221)
192 PLN02779 haloacid dehalogenase 87.6 0.31 6.6E-06 46.0 1.8 17 70-86 37-53 (286)
193 PLN02770 haloacid dehalogenase 87.6 0.3 6.5E-06 44.9 1.7 30 72-110 21-50 (248)
194 PLN02645 phosphoglycolate phos 87.6 1.9 4.1E-05 41.2 7.2 50 72-127 27-77 (311)
195 PF12689 Acid_PPase: Acid Phos 87.6 0.54 1.2E-05 40.9 3.2 58 73-130 3-82 (169)
196 TIGR01993 Pyr-5-nucltdase pyri 87.4 0.54 1.2E-05 40.8 3.1 35 255-292 143-177 (184)
197 PRK11590 hypothetical protein; 87.4 0.33 7.1E-06 43.5 1.8 15 72-86 5-19 (211)
198 TIGR02009 PGMB-YQAB-SF beta-ph 86.5 0.36 7.8E-06 41.7 1.5 35 255-292 144-178 (185)
199 TIGR03351 PhnX-like phosphonat 86.4 0.48 1E-05 42.3 2.3 28 74-110 2-29 (220)
200 TIGR01422 phosphonatase phosph 86.2 0.7 1.5E-05 42.4 3.3 15 73-87 2-16 (253)
201 PRK13223 phosphoglycolate phos 85.6 0.76 1.6E-05 43.0 3.3 29 73-110 13-41 (272)
202 KOG0206 P-type ATPase [General 85.6 0.76 1.6E-05 51.0 3.7 43 243-292 771-813 (1151)
203 KOG1615 Phosphoserine phosphat 85.5 0.52 1.1E-05 41.7 2.0 40 248-293 154-193 (227)
204 PHA02597 30.2 hypothetical pro 85.2 0.42 9.2E-06 42.0 1.3 62 254-323 131-195 (197)
205 TIGR02254 YjjG/YfnB HAD superf 84.8 0.59 1.3E-05 41.6 2.1 36 257-293 124-162 (224)
206 TIGR01990 bPGM beta-phosphoglu 84.6 0.79 1.7E-05 39.5 2.8 36 254-292 142-177 (185)
207 PRK14988 GMP/IMP nucleotidase; 83.9 0.52 1.1E-05 42.7 1.3 15 72-86 9-23 (224)
208 TIGR01493 HAD-SF-IA-v2 Haloaci 83.8 0.81 1.8E-05 39.2 2.4 30 256-288 142-171 (175)
209 PRK10826 2-deoxyglucose-6-phos 83.7 0.6 1.3E-05 41.9 1.6 17 71-87 5-21 (222)
210 TIGR01662 HAD-SF-IIIA HAD-supe 83.7 1.7 3.6E-05 35.5 4.2 36 254-292 86-123 (132)
211 TIGR01544 HAD-SF-IE haloacid d 83.4 1.1 2.4E-05 42.1 3.3 59 70-128 19-90 (277)
212 TIGR01261 hisB_Nterm histidino 83.4 0.92 2E-05 39.0 2.6 48 73-120 1-55 (161)
213 PLN02940 riboflavin kinase 83.4 2 4.3E-05 42.3 5.3 61 254-322 151-216 (382)
214 COG0546 Gph Predicted phosphat 83.0 0.73 1.6E-05 41.5 1.9 15 73-87 4-18 (220)
215 PRK13478 phosphonoacetaldehyde 82.6 1.2 2.5E-05 41.4 3.1 16 72-87 3-18 (267)
216 PRK10563 6-phosphogluconate ph 82.4 1.4 2.9E-05 39.4 3.4 41 254-302 143-183 (221)
217 PF05152 DUF705: Protein of un 82.3 5.7 0.00012 37.4 7.4 55 71-128 120-176 (297)
218 PRK13226 phosphoglycolate phos 82.3 0.56 1.2E-05 42.5 0.9 28 74-110 13-40 (229)
219 TIGR01454 AHBA_synth_RP 3-amin 82.2 0.54 1.2E-05 41.6 0.7 25 76-109 1-25 (205)
220 PRK10563 6-phosphogluconate ph 82.0 0.9 2E-05 40.6 2.1 30 72-110 3-32 (221)
221 KOG1615 Phosphoserine phosphat 81.9 2.9 6.4E-05 37.1 5.1 38 94-131 87-128 (227)
222 TIGR01545 YfhB_g-proteo haloac 81.9 1.3 2.9E-05 39.7 3.1 15 72-86 4-18 (210)
223 PRK10444 UMP phosphatase; Prov 81.7 4.2 9.1E-05 37.5 6.5 61 254-322 175-245 (248)
224 TIGR01452 PGP_euk phosphoglyco 81.7 1.9 4E-05 40.4 4.2 43 256-306 205-249 (279)
225 PRK09449 dUMP phosphatase; Pro 81.7 1.3 2.8E-05 39.6 3.0 14 73-86 3-16 (224)
226 PLN03243 haloacid dehalogenase 81.7 1.6 3.5E-05 40.6 3.7 33 70-110 21-53 (260)
227 TIGR01549 HAD-SF-IA-v1 haloaci 81.5 0.64 1.4E-05 38.9 0.9 35 254-292 119-153 (154)
228 PF06888 Put_Phosphatase: Puta 81.3 2.4 5.2E-05 38.9 4.6 34 95-128 71-107 (234)
229 TIGR01656 Histidinol-ppas hist 81.1 1.4 3E-05 37.0 2.8 36 254-292 102-137 (147)
230 KOG0203 Na+/K+ ATPase, alpha s 79.8 3.8 8.2E-05 43.9 5.9 38 275-317 707-747 (1019)
231 TIGR01990 bPGM beta-phosphoglu 79.7 1.6 3.5E-05 37.5 2.9 28 75-111 1-28 (185)
232 PLN02811 hydrolase 79.7 2.9 6.3E-05 37.5 4.6 59 255-321 139-205 (220)
233 TIGR01449 PGP_bact 2-phosphogl 79.6 0.72 1.6E-05 40.8 0.6 26 76-110 1-26 (213)
234 COG1011 Predicted hydrolase (H 79.3 5.7 0.00012 35.3 6.4 64 257-328 158-228 (229)
235 PRK10748 flavin mononucleotide 78.4 5.2 0.00011 36.4 5.9 17 71-87 8-24 (238)
236 TIGR02009 PGMB-YQAB-SF beta-ph 78.0 2.2 4.8E-05 36.6 3.2 28 74-110 2-29 (185)
237 PF11798 IMS_HHH: IMS family H 77.4 0.86 1.9E-05 28.1 0.3 9 341-349 12-20 (32)
238 PRK09456 ?-D-glucose-1-phospha 77.4 3.2 6.9E-05 36.5 4.1 36 254-292 142-177 (199)
239 TIGR01428 HAD_type_II 2-haloal 77.4 1.3 2.8E-05 38.9 1.5 34 256-292 151-184 (198)
240 PRK06698 bifunctional 5'-methy 77.1 1.2 2.7E-05 44.8 1.5 29 74-107 242-270 (459)
241 COG3700 AphA Acid phosphatase 76.5 6.6 0.00014 34.5 5.5 78 51-128 40-148 (237)
242 KOG3120 Predicted haloacid deh 76.3 2.3 5E-05 38.5 2.8 82 243-332 153-249 (256)
243 PRK08238 hypothetical protein; 76.1 2.4 5.1E-05 43.1 3.2 42 253-307 127-168 (479)
244 TIGR01668 YqeG_hyp_ppase HAD s 75.3 3.7 8E-05 35.4 3.8 45 254-306 92-138 (170)
245 COG2503 Predicted secreted aci 74.9 4.6 9.9E-05 37.1 4.3 35 53-87 59-93 (274)
246 COG3882 FkbH Predicted enzyme 74.8 8.5 0.00018 38.9 6.5 69 64-132 212-294 (574)
247 PF13419 HAD_2: Haloacid dehal 74.7 2.6 5.6E-05 35.2 2.7 36 254-292 134-169 (176)
248 KOG1618 Predicted phosphatase 74.3 4.2 9.1E-05 38.9 4.1 42 70-117 32-78 (389)
249 PF11019 DUF2608: Protein of u 73.9 13 0.00028 34.5 7.3 34 252-288 160-193 (252)
250 TIGR01681 HAD-SF-IIIC HAD-supe 73.8 4.2 9.1E-05 33.3 3.6 34 254-290 90-125 (128)
251 TIGR02247 HAD-1A3-hyp Epoxide 73.8 1.9 4.1E-05 38.2 1.6 34 256-292 155-188 (211)
252 TIGR01686 FkbH FkbH-like domai 73.4 8.4 0.00018 36.8 6.1 36 254-292 87-122 (320)
253 PF12710 HAD: haloacid dehalog 72.6 2 4.3E-05 37.1 1.5 11 76-86 1-11 (192)
254 KOG3109 Haloacid dehalogenase- 71.8 4.3 9.4E-05 36.7 3.4 74 243-329 155-230 (244)
255 TIGR01428 HAD_type_II 2-haloal 71.7 4.5 9.8E-05 35.3 3.6 36 257-293 120-158 (198)
256 PRK10725 fructose-1-P/6-phosph 71.4 4.6 0.0001 34.8 3.5 30 72-110 4-33 (188)
257 TIGR02247 HAD-1A3-hyp Epoxide 70.9 9.2 0.0002 33.7 5.4 13 74-86 3-15 (211)
258 TIGR01509 HAD-SF-IA-v3 haloaci 70.7 1.7 3.7E-05 37.1 0.6 34 256-292 143-176 (183)
259 PLN02177 glycerol-3-phosphate 70.0 5.1 0.00011 40.9 4.0 41 253-305 175-215 (497)
260 TIGR01509 HAD-SF-IA-v3 haloaci 69.9 7 0.00015 33.2 4.3 11 76-86 2-12 (183)
261 PHA02597 30.2 hypothetical pro 69.5 7 0.00015 34.1 4.3 15 73-87 2-16 (197)
262 TIGR01549 HAD-SF-IA-v1 haloaci 68.5 5.1 0.00011 33.3 3.1 27 75-110 1-27 (154)
263 COG1011 Predicted hydrolase (H 68.3 3.2 6.9E-05 36.9 1.9 36 258-294 127-165 (229)
264 PF00702 Hydrolase: haloacid d 68.1 3 6.5E-05 36.5 1.6 49 254-306 152-204 (215)
265 TIGR01685 MDP-1 magnesium-depe 66.9 10 0.00022 33.1 4.7 23 267-292 127-149 (174)
266 TIGR01548 HAD-SF-IA-hyp1 haloa 66.1 4.9 0.00011 35.2 2.6 27 75-110 2-28 (197)
267 TIGR01993 Pyr-5-nucltdase pyri 65.7 7.7 0.00017 33.4 3.7 37 257-294 109-152 (184)
268 TIGR02252 DREG-2 REG-2-like, H 65.3 7.6 0.00016 34.0 3.7 14 74-87 1-14 (203)
269 KOG0208 Cation transport ATPas 65.3 6.3 0.00014 43.0 3.5 63 254-328 840-904 (1140)
270 PRK05446 imidazole glycerol-ph 65.1 13 0.00028 36.3 5.4 37 253-292 104-140 (354)
271 KOG3085 Predicted hydrolase (H 64.3 8 0.00017 35.5 3.6 43 257-307 172-216 (237)
272 TIGR01456 CECR5 HAD-superfamil 63.7 21 0.00046 34.1 6.7 46 75-126 2-55 (321)
273 PRK09456 ?-D-glucose-1-phospha 63.6 4.1 8.9E-05 35.8 1.6 13 75-87 2-14 (199)
274 KOG3120 Predicted haloacid deh 63.1 17 0.00036 33.1 5.3 18 70-87 10-27 (256)
275 COG4483 Uncharacterized protei 62.9 4.8 0.0001 29.0 1.5 28 257-291 5-32 (68)
276 PF06941 NT5C: 5' nucleotidase 62.1 4.5 9.8E-05 35.5 1.6 14 73-86 1-15 (191)
277 cd00218 GlcAT-I Beta1,3-glucur 61.7 16 0.00035 33.2 5.0 45 247-295 72-119 (223)
278 TIGR01691 enolase-ppase 2,3-di 61.3 8.2 0.00018 35.0 3.2 36 254-292 153-188 (220)
279 COG4359 Uncharacterized conser 59.1 6.1 0.00013 34.9 1.8 15 72-86 2-16 (220)
280 smart00577 CPDc catalytic doma 59.1 4.8 0.0001 33.8 1.2 31 259-292 104-134 (148)
281 TIGR00071 hisT_truA pseudourid 58.3 14 0.0003 33.7 4.1 56 73-128 2-58 (227)
282 TIGR01493 HAD-SF-IA-v2 Haloaci 58.2 9 0.0002 32.6 2.8 27 75-110 1-27 (175)
283 cd04256 AAK_P5CS_ProBA AAK_P5C 57.3 34 0.00073 32.3 6.7 24 69-92 191-214 (284)
284 PLN02919 haloacid dehalogenase 55.9 5.3 0.00012 44.7 1.2 60 255-322 220-285 (1057)
285 PTZ00205 DNA polymerase kappa; 55.5 57 0.0012 34.0 8.3 102 217-349 204-318 (571)
286 PLN02919 haloacid dehalogenase 55.3 17 0.00038 40.7 5.0 31 71-110 73-103 (1057)
287 KOG0209 P-type ATPase [Inorgan 55.0 8.9 0.00019 41.2 2.5 29 275-308 808-836 (1160)
288 PHA02530 pseT polynucleotide k 54.7 13 0.00028 34.8 3.4 40 254-301 252-292 (300)
289 PRK12314 gamma-glutamyl kinase 54.2 49 0.0011 30.8 7.2 20 68-87 166-185 (266)
290 PF03360 Glyco_transf_43: Glyc 52.7 20 0.00043 32.3 4.0 45 248-296 55-102 (207)
291 PTZ00489 glutamate 5-kinase; P 52.7 54 0.0012 30.6 7.2 18 69-86 160-177 (264)
292 PF04312 DUF460: Protein of un 50.3 20 0.00044 30.0 3.4 62 75-149 45-109 (138)
293 cd02966 TlpA_like_family TlpA- 49.6 39 0.00084 25.4 5.0 81 48-143 27-111 (116)
294 TIGR01511 ATPase-IB1_Cu copper 49.4 31 0.00067 35.8 5.5 58 71-130 383-441 (562)
295 TIGR01664 DNA-3'-Pase DNA 3'-p 49.3 18 0.00039 31.1 3.2 34 256-292 111-154 (166)
296 TIGR01460 HAD-SF-IIA Haloacid 47.8 26 0.00057 31.8 4.2 36 254-292 189-226 (236)
297 PRK14557 pyrH uridylate kinase 46.5 55 0.0012 30.2 6.1 74 69-148 152-241 (247)
298 COG0101 TruA Pseudouridylate s 46.4 32 0.00068 32.2 4.5 55 73-127 3-58 (266)
299 COG0241 HisB Histidinol phosph 45.7 63 0.0014 28.4 6.0 51 245-306 101-151 (181)
300 cd04239 AAK_UMPK-like AAK_UMPK 45.7 42 0.00092 30.3 5.2 62 68-129 144-220 (229)
301 PRK00358 pyrH uridylate kinase 45.6 44 0.00095 30.2 5.3 63 67-129 145-222 (231)
302 TIGR00735 hisF imidazoleglycer 45.2 69 0.0015 29.4 6.6 62 61-122 112-180 (254)
303 COG2179 Predicted hydrolase of 44.7 19 0.0004 31.3 2.5 43 255-305 95-139 (175)
304 PF06014 DUF910: Bacterial pro 44.2 7.5 0.00016 27.9 -0.0 27 258-291 6-32 (62)
305 PRK03609 umuC DNA polymerase V 44.1 65 0.0014 32.0 6.7 34 217-250 75-110 (422)
306 PF11019 DUF2608: Protein of u 43.3 35 0.00076 31.6 4.3 29 60-88 5-35 (252)
307 KOG2116 Protein involved in pl 43.3 41 0.00088 35.3 5.0 76 72-149 529-617 (738)
308 TIGR02399 salt_tol_Pase glucos 42.2 47 0.001 32.2 4.9 51 69-121 4-54 (389)
309 PRK14058 acetylglutamate/acety 42.0 56 0.0012 30.3 5.5 20 67-86 179-198 (268)
310 TIGR01544 HAD-SF-IE haloacid d 41.7 41 0.00088 31.7 4.5 39 252-293 190-231 (277)
311 PRK03858 DNA polymerase IV; Va 41.3 1.4E+02 0.003 29.3 8.5 36 215-250 72-109 (396)
312 PRK14558 pyrH uridylate kinase 41.0 57 0.0012 29.5 5.3 61 69-129 145-220 (231)
313 cd04255 AAK_UMPK-MosAB AAK_UMP 40.8 95 0.0021 28.9 6.8 20 67-86 172-191 (262)
314 cd04242 AAK_G5K_ProB AAK_G5K_P 39.8 40 0.00086 31.0 4.1 21 67-87 153-173 (251)
315 PLN02177 glycerol-3-phosphate 39.0 17 0.00037 37.2 1.7 20 109-128 121-140 (497)
316 COG1608 Predicted archaeal kin 38.5 1.2E+02 0.0027 27.9 6.9 22 66-87 157-178 (252)
317 PF09949 DUF2183: Uncharacteri 38.4 1.1E+02 0.0025 24.0 5.9 36 254-294 50-86 (100)
318 TIGR01092 P5CS delta l-pyrroli 38.3 80 0.0017 33.9 6.6 61 68-129 179-265 (715)
319 cd04254 AAK_UMPK-PyrH-Ec UMP k 38.3 64 0.0014 29.2 5.2 62 68-129 146-222 (231)
320 cd01701 PolY_Rev1 DNA polymera 37.4 2.8E+02 0.0061 27.4 10.0 34 217-250 122-157 (404)
321 TIGR02076 pyrH_arch uridylate 37.4 1.1E+02 0.0023 27.4 6.5 60 69-128 128-211 (221)
322 PRK04128 1-(5-phosphoribosyl)- 36.9 60 0.0013 29.5 4.7 48 72-129 43-93 (228)
323 KOG0204 Calcium transporting A 36.2 62 0.0014 35.2 5.2 53 253-317 725-780 (1034)
324 cd01703 PolY_Pol_iota DNA Poly 35.9 2.5E+02 0.0055 27.6 9.3 32 219-250 72-107 (379)
325 smart00775 LNS2 LNS2 domain. T 35.8 52 0.0011 28.0 3.9 37 254-292 102-138 (157)
326 KOG2134 Polynucleotide kinase 35.2 30 0.00065 34.1 2.5 49 69-117 71-127 (422)
327 PRK01810 DNA polymerase IV; Va 35.1 4.5E+02 0.0097 25.8 11.1 36 215-250 79-116 (407)
328 PRK14556 pyrH uridylate kinase 35.1 77 0.0017 29.4 5.1 61 69-129 163-238 (249)
329 COG4996 Predicted phosphatase 34.7 21 0.00046 29.8 1.2 14 74-87 1-14 (164)
330 PF06189 5-nucleotidase: 5'-nu 34.6 79 0.0017 29.5 5.1 58 71-128 119-204 (264)
331 PRK13587 1-(5-phosphoribosyl)- 34.0 78 0.0017 28.8 5.0 45 73-129 163-212 (234)
332 PF09506 Salt_tol_Pase: Glucos 33.8 75 0.0016 30.7 4.9 48 72-121 1-48 (381)
333 COG2216 KdpB High-affinity K+ 33.8 23 0.0005 36.3 1.5 56 245-315 491-548 (681)
334 PLN02458 transferase, transfer 33.5 69 0.0015 30.9 4.6 35 255-295 190-226 (346)
335 PLN02418 delta-1-pyrroline-5-c 33.4 1.1E+02 0.0024 32.9 6.7 61 68-129 187-273 (718)
336 PRK10671 copA copper exporting 33.3 1.1E+02 0.0024 33.4 6.8 78 50-129 606-685 (834)
337 cd04251 AAK_NAGK-UC AAK_NAGK-U 33.3 1.1E+02 0.0024 28.1 6.0 20 67-86 175-194 (257)
338 COG0647 NagD Predicted sugar p 33.3 81 0.0018 29.6 5.0 42 257-306 194-237 (269)
339 COG0548 ArgB Acetylglutamate k 33.1 1.4E+02 0.0031 27.9 6.5 59 64-123 170-248 (265)
340 PRK14588 tRNA pseudouridine sy 33.0 60 0.0013 30.4 4.1 56 73-128 3-59 (272)
341 PRK12686 carbamate kinase; Rev 32.5 74 0.0016 30.5 4.7 59 68-129 222-280 (312)
342 TIGR02075 pyrH_bact uridylate 32.4 85 0.0018 28.4 5.0 62 68-129 147-224 (233)
343 cd04241 AAK_FomA-like AAK_FomA 32.2 1.1E+02 0.0024 27.9 5.8 18 69-86 160-177 (252)
344 COG5083 SMP2 Uncharacterized p 31.7 26 0.00056 35.1 1.5 16 71-86 373-388 (580)
345 cd04253 AAK_UMPK-PyrH-Pf AAK_U 31.4 1.5E+02 0.0034 26.4 6.5 61 69-129 128-212 (221)
346 PRK14133 DNA polymerase IV; Pr 31.4 1.6E+02 0.0036 28.2 7.1 35 216-250 76-112 (347)
347 PF13419 HAD_2: Haloacid dehal 31.0 35 0.00075 28.1 2.1 35 95-129 77-112 (176)
348 KOG2882 p-Nitrophenyl phosphat 30.9 74 0.0016 30.3 4.3 47 75-127 24-71 (306)
349 PRK09411 carbamate kinase; Rev 30.9 79 0.0017 30.1 4.6 55 68-129 212-266 (297)
350 KOG1605 TFIIF-interacting CTD 30.9 29 0.00062 32.4 1.6 18 70-87 86-103 (262)
351 cd00424 PolY Y-family of DNA p 30.8 3E+02 0.0066 26.3 8.8 34 217-250 73-108 (343)
352 PRK12352 putative carbamate ki 30.6 89 0.0019 30.0 4.9 60 66-128 224-283 (316)
353 TIGR00761 argB acetylglutamate 30.5 83 0.0018 28.3 4.6 57 66-129 164-220 (231)
354 PRK11009 aphA acid phosphatase 29.7 46 0.001 30.5 2.8 18 275-292 186-203 (237)
355 PRK13402 gamma-glutamyl kinase 29.5 1.4E+02 0.0029 29.4 6.1 60 69-128 160-246 (368)
356 PRK00021 truA tRNA pseudouridi 29.0 80 0.0017 28.9 4.2 55 73-127 3-58 (244)
357 cd04237 AAK_NAGS-ABP AAK_NAGS- 29.0 88 0.0019 29.3 4.6 55 68-129 192-246 (280)
358 cd04249 AAK_NAGK-NC AAK_NAGK-N 28.9 1.9E+02 0.0041 26.4 6.8 17 69-86 168-184 (252)
359 KOG4549 Magnesium-dependent ph 28.7 1.4E+02 0.0029 24.9 4.9 54 73-126 18-76 (144)
360 TIGR01459 HAD-SF-IIA-hyp4 HAD- 28.5 72 0.0016 28.9 3.9 36 254-292 196-233 (242)
361 PRK10886 DnaA initiator-associ 28.4 2.4E+02 0.0053 24.9 7.1 51 66-129 104-155 (196)
362 KOG0205 Plasma membrane H+-tra 28.0 39 0.00084 35.7 2.1 62 243-319 564-627 (942)
363 PRK12434 tRNA pseudouridine sy 27.7 91 0.002 28.7 4.4 56 73-128 3-60 (245)
364 cd02115 AAK Amino Acid Kinases 27.4 1E+02 0.0022 27.8 4.6 20 67-86 161-180 (248)
365 COG0106 HisA Phosphoribosylfor 27.2 1.4E+02 0.003 27.6 5.3 47 71-129 160-211 (241)
366 TIGR01027 proB glutamate 5-kin 27.2 2.1E+02 0.0045 28.0 7.0 61 69-129 156-243 (363)
367 PF13382 Adenine_deam_C: Adeni 27.1 2.1E+02 0.0046 24.8 6.3 58 275-335 67-133 (171)
368 PLN02499 glycerol-3-phosphate 27.1 56 0.0012 33.4 3.0 25 72-101 7-31 (498)
369 PRK11033 zntA zinc/cadmium/mer 27.0 1.3E+02 0.0029 32.4 6.1 58 70-129 545-603 (741)
370 PRK03103 DNA polymerase IV; Re 26.8 1.1E+02 0.0024 30.1 5.1 36 215-250 77-114 (409)
371 PRK02406 DNA polymerase IV; Va 26.7 1.2E+02 0.0025 29.2 5.1 36 215-250 67-104 (343)
372 CHL00202 argB acetylglutamate 26.2 1.1E+02 0.0023 28.8 4.6 57 67-128 191-247 (284)
373 COG1576 Uncharacterized conser 26.1 2.2E+02 0.0047 24.4 5.9 47 65-121 60-107 (155)
374 PRK14586 tRNA pseudouridine sy 25.8 93 0.002 28.6 4.1 55 73-127 3-58 (245)
375 TIGR01106 ATPase-IIC_X-K sodiu 25.5 80 0.0017 35.3 4.2 34 96-129 569-603 (997)
376 PF09419 PGP_phosphatase: Mito 25.4 1.3E+02 0.0028 26.1 4.6 46 257-306 118-166 (168)
377 TIGR01672 AphA HAD superfamily 25.4 65 0.0014 29.5 2.9 18 275-292 186-203 (237)
378 TIGR01512 ATPase-IB2_Cd heavy 24.9 98 0.0021 31.9 4.4 55 73-129 342-398 (536)
379 KOG1359 Glycine C-acetyltransf 24.7 1.9E+02 0.004 27.8 5.7 67 68-148 189-278 (417)
380 cd04731 HisF The cyclase subun 24.3 2.3E+02 0.0051 25.5 6.4 59 60-121 108-173 (243)
381 TIGR01658 EYA-cons_domain eyes 23.8 1.1E+02 0.0024 28.4 4.0 43 252-302 212-254 (274)
382 PF06342 DUF1057: Alpha/beta h 23.8 1.6E+02 0.0035 28.0 5.1 66 233-306 70-135 (297)
383 TIGR02129 hisA_euk phosphoribo 23.8 1.4E+02 0.0031 27.7 4.8 44 72-127 171-219 (253)
384 cd04246 AAK_AK-DapG-like AAK_A 23.8 2.3E+02 0.0049 25.6 6.2 20 67-86 160-179 (239)
385 cd04252 AAK_NAGK-fArgBP AAK_NA 23.8 1.5E+02 0.0033 27.1 5.1 55 66-128 159-214 (248)
386 PRK02794 DNA polymerase IV; Pr 23.5 4.6E+02 0.01 25.9 8.8 34 216-249 108-143 (419)
387 KOG3040 Predicted sugar phosph 23.4 53 0.0011 29.8 1.8 23 260-285 188-210 (262)
388 TIGR00746 arcC carbamate kinas 23.3 1.4E+02 0.003 28.6 4.8 65 61-128 210-278 (310)
389 PF01380 SIS: SIS domain SIS d 22.9 2.3E+02 0.0049 22.3 5.5 47 70-129 52-99 (131)
390 COG0436 Aspartate/tyrosine/aro 22.8 2E+02 0.0044 28.3 6.1 58 58-122 149-206 (393)
391 PRK12454 carbamate kinase-like 22.6 1.5E+02 0.0033 28.4 4.9 59 68-129 224-282 (313)
392 TIGR01497 kdpB K+-transporting 22.6 1.6E+02 0.0035 31.4 5.6 58 69-128 422-480 (675)
393 PRK05429 gamma-glutamyl kinase 22.5 2.4E+02 0.0053 27.6 6.5 20 68-87 163-182 (372)
394 PRK03352 DNA polymerase IV; Va 22.0 7E+02 0.015 23.8 9.6 34 217-250 83-118 (346)
395 KOG3109 Haloacid dehalogenase- 21.6 1.2E+02 0.0025 27.8 3.6 40 252-293 122-170 (244)
396 cd03586 PolY_Pol_IV_kappa DNA 21.6 1.6E+02 0.0035 27.9 5.0 61 217-282 72-140 (334)
397 KOG2467 Glycine/serine hydroxy 21.5 1.4E+02 0.0031 29.4 4.4 81 235-332 341-426 (477)
398 TIGR01533 lipo_e_P4 5'-nucleot 21.4 1.6E+02 0.0035 27.5 4.7 35 247-289 170-204 (266)
399 COG0378 HypB Ni2+-binding GTPa 21.3 4.1E+02 0.0088 23.8 6.9 79 244-334 15-95 (202)
400 cd04260 AAK_AKi-DapG-BS AAK_AK 21.2 1.8E+02 0.0039 26.5 5.0 20 67-86 165-184 (244)
401 PF11071 DUF2872: Protein of u 21.1 39 0.00085 28.1 0.5 71 254-330 56-140 (141)
No 1
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.8e-61 Score=465.22 Aligned_cols=317 Identities=52% Similarity=0.880 Sum_probs=274.4
Q ss_pred cccccCCCCCccccCCCCC---CC---CCCCCchHHhHHHhhCCCCCCcHHHHHHHhccCCEEEEEecCcccCCCCCCCC
Q 018797 19 ENNDENGGDHSINERTTSN---PP---DSVTSDASYNSWMMEHPSALGSFDKMMKAAKEKKIAVFLNYDGTLSPIVDDPD 92 (350)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~al~~f~~~~~~~~~k~~lif~D~DGTLl~~~~~p~ 92 (350)
..+..+++|..+||+.+.. .. ++.+.+.+|.+||.+|||||.+|+++.++.++++++|||||||||++++++|+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd 138 (384)
T PLN02580 59 RSNGWLDAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPD 138 (384)
T ss_pred cccchhhhhhccCCCccccccccccccccccchHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcc
Confidence 3567889999999876431 11 44667889999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCCcc-cccCccccc-cCCCCCCcee
Q 018797 93 RVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRPVK-ACEGKYHTL-VPGKKGNEVL 170 (350)
Q Consensus 93 ~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 170 (350)
.+.|+++++++|++|+++++++|+|||+++.+.+++++++++|+|+||++++.+.+... ..|. .+.. .+....++..
T Consensus 139 ~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~-~~~~~~~~~g~~~~~ 217 (384)
T PLN02580 139 RALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHP-NCIKSTDQQGKEVNL 217 (384)
T ss_pred cccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCccccccc-ccccccccccccccc
Confidence 99999999999999999999999999999999999999899999999999998755322 1232 1111 1222334556
Q ss_pred ecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcC
Q 018797 171 FQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPS 250 (350)
Q Consensus 171 ~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~ 250 (350)
++++.+|.++++++.+.+.+++++++|+++|+|++|++||||+++++.++.+.+.+++++..+|++.+..|++++||+|.
T Consensus 218 ~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~ 297 (384)
T PLN02580 218 FQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPV 297 (384)
T ss_pred cccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecC
Confidence 67777788888999999998888999999999999999999999877788888889988888888999999999999993
Q ss_pred CCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHH
Q 018797 251 IEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLS 330 (350)
Q Consensus 251 ~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~ 330 (350)
+++|||.||++|++.+|++..+...++||||+.||++||+++++.+.|++|+|+|+++++.|+|.+++|++|.+||++|+
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 39999999999999999886433457999999999999999987767999999999999999999999999999999999
Q ss_pred hcccCC
Q 018797 331 RWRKSS 336 (350)
Q Consensus 331 ~~~~~~ 336 (350)
+|++.+
T Consensus 378 ~~~~~~ 383 (384)
T PLN02580 378 TWKKSE 383 (384)
T ss_pred HhhhcC
Confidence 999864
No 2
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=9.2e-61 Score=456.46 Aligned_cols=307 Identities=51% Similarity=0.928 Sum_probs=269.7
Q ss_pred cccCCCCCccccCCCCCCCCCCCCchHHhHHHhhCCCCCCcHHHHHHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHH
Q 018797 21 NDENGGDHSINERTTSNPPDSVTSDASYNSWMMEHPSALGSFDKMMKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEM 100 (350)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~ 100 (350)
+..+++|..+||+.......+...+.+|.+||.+|||||..|+++++.+++++++||+||||||+|++++|+.+.|++++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~ 138 (366)
T PLN03017 59 NAWVDSMRASSPTHLKSLPSSISSQQQLNSWIMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKM 138 (366)
T ss_pred chHHHHHhccCCCccccccccccchhhhhHHHhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHH
Confidence 34578899999987543333344578999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHhcCCEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCCcccccCccccccCCCCCCceeecccccchhH
Q 018797 101 RAAVREVAKYFPTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPA 180 (350)
Q Consensus 101 ~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (350)
+++|++|++.++|+|+|||++..+.+++++.+++++|+||++|..|++.... + ....+++.++++.+|.++
T Consensus 139 ~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~-~--------~~~~~~~~~~~~~~~~~~ 209 (366)
T PLN03017 139 RRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSR-H--------KRVKQSLLYQPANDYLPM 209 (366)
T ss_pred HHHHHHHhcCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCccee-c--------cccccccccccchhhHHH
Confidence 9999999976899999999999999998888899999999999988653211 1 112233445666667788
Q ss_pred HHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHH
Q 018797 181 IQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALE 260 (350)
Q Consensus 181 i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~ 260 (350)
++++.+.+.+++++++|+++|+|++|++||||++++..+.++.+.++++++.+|++.++.|++++||+|.++||||.|++
T Consensus 210 i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~ 289 (366)
T PLN03017 210 IDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALE 289 (366)
T ss_pred HHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHH
Confidence 89999989988999999999999999999999998877788888899999999889999999999999965999999999
Q ss_pred HHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHhcccCC
Q 018797 261 YLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSRWRKSS 336 (350)
Q Consensus 261 ~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~~~~~~ 336 (350)
+|++.+++...+++.++|||||.+||+||++++++++|++|.|+..+++|.|+|++++|++|++||++|++|++..
T Consensus 290 ~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~~ 365 (366)
T PLN03017 290 FLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQMQ 365 (366)
T ss_pred HHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhhc
Confidence 9999999886556789999999999999999998778999999988888999999999999999999999998753
No 3
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=8.9e-59 Score=441.64 Aligned_cols=301 Identities=52% Similarity=0.888 Sum_probs=264.3
Q ss_pred ccccCCCCCccccCCCCCCCCCCCCchHHhHHHhhCCCCCCcHHHHHHHhccCCEEEEEecCcccCCCCCCCCCCCCCHH
Q 018797 20 NNDENGGDHSINERTTSNPPDSVTSDASYNSWMMEHPSALGSFDKMMKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDE 99 (350)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~ 99 (350)
.+..+++|..|||+... ...+|.+||.+|||||..|+++++.+++++++||+||||||+|++++|+.+.++++
T Consensus 52 ~~~~~~~~~~~~~~~~~-------~~~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~ 124 (354)
T PLN02151 52 IRSWVDSMRACSPTRPK-------SFNKQSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKK 124 (354)
T ss_pred cchHHHHHhccCCCccc-------chhhHHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHH
Confidence 45568889999988643 23589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCCcccccCccccccCCCCCCceeecccccchh
Q 018797 100 MRAAVREVAKYFPTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLP 179 (350)
Q Consensus 100 ~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (350)
++++|++|++.++|+|+|||+++.+.+++++++++|+|+||++++.+++.. .|. ...+...++++.+|.+
T Consensus 125 ~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~--~~~--------~~~~~~~~~~~~~~~~ 194 (354)
T PLN02151 125 MRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGS--KYK--------KENQSLLCQPATEFLP 194 (354)
T ss_pred HHHHHHHHhcCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCc--ccc--------ccccccccccchhhHH
Confidence 999999999878999999999999999999989999999999999875432 121 0112234455666777
Q ss_pred HHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHH
Q 018797 180 AIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHAL 259 (350)
Q Consensus 180 ~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al 259 (350)
+++++.+.+.+++.+++|+++|+|++|++||||+++++.+.++.+.+++++..+|++.++.|++++||+|.++||||.||
T Consensus 195 ~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av 274 (354)
T PLN02151 195 VINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKAL 274 (354)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHH
Confidence 88888888888888999999999999999999999877677777888888888888999999999999995599999999
Q ss_pred HHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHhcccCCC
Q 018797 260 EYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSRWRKSSS 337 (350)
Q Consensus 260 ~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~~~~~~~ 337 (350)
++|++.+++....+++++|||||.+||+||+++++.++|+||.|+..+++|.|+|++++|++|.+||+.|+.|++.+.
T Consensus 275 ~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~~~ 352 (354)
T PLN02151 275 EFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQLRC 352 (354)
T ss_pred HHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhhccc
Confidence 999999998755456899999999999999999987779999999888899999999999999999999999998754
No 4
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=4.7e-39 Score=300.13 Aligned_cols=233 Identities=25% Similarity=0.411 Sum_probs=191.6
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCC
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY--FPTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~ 149 (350)
++.+||+||||||+++..+|+++.++++++++|++|+++ +.|+|+|||++..+.++++..+++++|+||++|+.+++.
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGK 92 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCC
Confidence 378999999999999999999999999999999999983 589999999999999998765678999999999876543
Q ss_pred cccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHH-HH
Q 018797 150 VKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKA-KA 228 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l-~~ 228 (350)
... .... .++..++.+.+.+++.+++|.++|.+..++.+||++++.+ .....++ +.
T Consensus 93 ~~~------------------~~l~---~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~ 149 (266)
T PRK10187 93 THI------------------VHLP---DAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQR 149 (266)
T ss_pred eee------------------ccCC---hhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHH
Confidence 210 0111 1345666677777677789999999999999999877432 2223333 33
Q ss_pred HHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC
Q 018797 229 VLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK 308 (350)
Q Consensus 229 ~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~ 308 (350)
+.+.++.+.+.+|+.++||+|+ ++|||.||++|++.+|+..+ .+++|||+.||++||+++++.+ |++|+|+|+.
T Consensus 150 i~~~~~~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~~-g~~vavg~a~- 223 (266)
T PRK10187 150 ITQIWPQLALQPGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRLG-GISVKVGTGA- 223 (266)
T ss_pred HHhhCCceEEeCCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhcC-CeEEEECCCC-
Confidence 4445555777889999999999 99999999999999998876 9999999999999999997543 8999999974
Q ss_pred CccceEEeCCHHHHHHHHHHHHhccc
Q 018797 309 ETKASYSLNDPSEVLTFLLRLSRWRK 334 (350)
Q Consensus 309 ~t~A~y~l~~~~eV~~~L~~l~~~~~ 334 (350)
+.|.|++.+|++|..||..|+...+
T Consensus 224 -~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 224 -TQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred -CcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 6899999999999999999996544
No 5
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.6e-39 Score=298.04 Aligned_cols=225 Identities=40% Similarity=0.616 Sum_probs=152.3
Q ss_pred EEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCCccccc
Q 018797 77 FLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF--PTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRPVKACE 154 (350)
Q Consensus 77 f~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~~~~~~ 154 (350)
||||||||.++..+|+...++++++++|++|++++ .|+|+|||+.+.+..+.++++++++|+||++++.+++....
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~-- 78 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWT-- 78 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccc--
Confidence 79999999999999999999999999999999985 59999999999988888999999999999999998764210
Q ss_pred CccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChh----hHHHHHHHHHHHH
Q 018797 155 GKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREE----DYSILQEKAKAVL 230 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~----~~~~~~~~l~~~l 230 (350)
..+......|++.+.+.++.+.++++|+++|++++++.||||+++++ ...++.+.+.+.+
T Consensus 79 ----------------~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~ 142 (235)
T PF02358_consen 79 ----------------NLPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREIL 142 (235)
T ss_dssp -----------------TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHH
T ss_pred ----------------ccccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHH
Confidence 01223345788999999999999999999999999999999998876 3457777788878
Q ss_pred hhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhC-CCceEEEEcCCC--
Q 018797 231 RNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGR-GQGYPIIVSSTP-- 307 (350)
Q Consensus 231 ~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~-~~g~~Vav~na~-- 307 (350)
..++++++..|++++||+|. +++||.|+++|++.++....+.+.++|+|||.+||+||+++++. ..|++|.|+...
T Consensus 143 ~~~~~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~ 221 (235)
T PF02358_consen 143 ASHPGLEVVPGKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVG 221 (235)
T ss_dssp HHH-T-EEEE-SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----
T ss_pred HhCCCEEEEECCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccc
Confidence 77778999999999999999 99999999999999987633445999999999999999999875 347899998865
Q ss_pred -CCccceEEeCCHH
Q 018797 308 -KETKASYSLNDPS 320 (350)
Q Consensus 308 -~~t~A~y~l~~~~ 320 (350)
++|.|+|.++||+
T Consensus 222 ~~~t~A~y~l~~p~ 235 (235)
T PF02358_consen 222 EKPTAASYRLDDPS 235 (235)
T ss_dssp --------------
T ss_pred ccccccccccccCC
Confidence 5699999999874
No 6
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=3.7e-37 Score=284.02 Aligned_cols=236 Identities=33% Similarity=0.421 Sum_probs=184.2
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCC
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF--PTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPR 148 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~ 148 (350)
+|+++|||||||||+++..+|+...++++++++|++|+++. .|+|+|||+...+..++.+++++++|+||++++.+ +
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~-g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDN-G 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecC-C
Confidence 57899999999999999999999999999999999999984 57899999999888888788899999999999873 3
Q ss_pred CcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCCh-hhHHH-HHHHH
Q 018797 149 PVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVRE-EDYSI-LQEKA 226 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~-~~~~~-~~~~l 226 (350)
... .|. . +......| .++...+.++....+|+++|+++++++||||++++ +.... +.+.+
T Consensus 80 ~~~-~~~--------------~--~~~~~~~~-~~~~~~l~~~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~ 141 (244)
T TIGR00685 80 SCQ-DWV--------------N--LTEKIPSW-KVRANELREEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELK 141 (244)
T ss_pred Ccc-eee--------------e--chhhhhhH-HHHHHHHHHHHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHH
Confidence 221 121 0 11111122 33333343333444999999999999999999833 32222 22333
Q ss_pred HHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCC---CceEEEE
Q 018797 227 KAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRG---QGYPIIV 303 (350)
Q Consensus 227 ~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~---~g~~Vav 303 (350)
.+..... ++.+..|+.++|++|. ++|||.|++.+++.+++... .+++|||+.||++||+.++... .+++|.|
T Consensus 142 ~~~~~~~-~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v 216 (244)
T TIGR00685 142 EKILSFT-DLEVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI 216 (244)
T ss_pred HHHhcCC-CEEEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE
Confidence 3333333 5888899999999999 99999999999999998766 9999999999999999995432 2689999
Q ss_pred cCCCCCccceEEeCCHHHHHHHHHHHH
Q 018797 304 SSTPKETKASYSLNDPSEVLTFLLRLS 330 (350)
Q Consensus 304 ~na~~~t~A~y~l~~~~eV~~~L~~l~ 330 (350)
+.+..++.|+|+++++++|..+|+.|+
T Consensus 217 ~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 217 GSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred ecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 766667899999999999999998875
No 7
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-37 Score=281.62 Aligned_cols=239 Identities=27% Similarity=0.409 Sum_probs=200.8
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCC--EEEEcCCChhhHHhhhcccCceEeccCcceEeCC
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFP--TAIISGRSREKVMGFVELCNVYYAGSHGMDILAP 146 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~--v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~ 146 (350)
.+++++++|+||||||+++..+|+...++++++++|++|+.+.+ ++|+|||+...+..++++++++++|+||++++.+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~ 93 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDP 93 (266)
T ss_pred ccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecC
Confidence 46899999999999999999999999999999999999999965 9999999999999999999999999999999988
Q ss_pred CCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHH
Q 018797 147 PRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKA 226 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l 226 (350)
.|.... ......++.|++++.+.++++++++||+++|.|++++.||||+++++......-..
T Consensus 94 ~g~~~~------------------~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~ 155 (266)
T COG1877 94 NGKWWI------------------NLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAE 155 (266)
T ss_pred CCCeeE------------------ecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHH
Confidence 876321 11233456889999999999999999999999999999999999876443322222
Q ss_pred HHHHhhCCC-cEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC
Q 018797 227 KAVLRNYPD-FDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS 305 (350)
Q Consensus 227 ~~~l~~~~~-l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n 305 (350)
+.. ...+. ++++.|+.++|++|. +++||.|+.++++.++.... .+++.|||.+|++||++++... +++|-|+.
T Consensus 156 ~~~-~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~~-~~~v~v~~ 229 (266)
T COG1877 156 AAT-LINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLD-SITVKVGV 229 (266)
T ss_pred HHh-ccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccCC-CceEEecC
Confidence 222 22223 889999999999999 99999999999999988764 8999999999999999998654 56666654
Q ss_pred CCCCccceEEeCCHHHHHHHHHHHHhcc
Q 018797 306 TPKETKASYSLNDPSEVLTFLLRLSRWR 333 (350)
Q Consensus 306 a~~~t~A~y~l~~~~eV~~~L~~l~~~~ 333 (350)
+ .+.|.+.+..+..+..+|.++....
T Consensus 230 ~--~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 230 G--STQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred C--cccccccccccHHHHHHHHHHHHHh
Confidence 4 7899999888888888888776654
No 8
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.3e-34 Score=304.36 Aligned_cols=240 Identities=29% Similarity=0.421 Sum_probs=195.9
Q ss_pred cHHHHHHHhc-cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhcccCceEec
Q 018797 61 SFDKMMKAAK-EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY--FPTAIISGRSREKVMGFVELCNVYYAG 137 (350)
Q Consensus 61 ~f~~~~~~~~-~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~l~~l~~i~ 137 (350)
.++.+.+++. +++++|++||||||+++..+|+.+.++++++++|++|+++ ..|+|+|||++..+.++++..++++|+
T Consensus 479 ~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~lia 558 (726)
T PRK14501 479 AAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVA 558 (726)
T ss_pred CHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEE
Confidence 4567776664 8999999999999999887888888999999999999995 589999999999999999865789999
Q ss_pred cCcceEeCCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChh
Q 018797 138 SHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREE 217 (350)
Q Consensus 138 ~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~ 217 (350)
+||++|+.+++... ..... -..|.+.+...++.+.++++|.++|.+..++++||++.+.+
T Consensus 559 enG~~i~~~~~~w~------------------~~~~~--~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~ 618 (726)
T PRK14501 559 EHGAWSRAPGGEWQ------------------LLEPV--ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPE 618 (726)
T ss_pred eCCEEEeCCCCceE------------------ECCCc--chhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHH
Confidence 99999987655321 00110 13466777778888888899999999999999999988765
Q ss_pred hHHH----HHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHH
Q 018797 218 DYSI----LQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIK 293 (350)
Q Consensus 218 ~~~~----~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~ 293 (350)
.... +.+.++..+... .+.+.+|+.++||+|+ ++|||.|+++|++ +++.+ ++++|||+.||++||+.++
T Consensus 619 ~~~~~a~~l~~~l~~~~~~~-~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~d---~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 619 LGEARANELILALSSLLSNA-PLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPYD---FVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCCC---EEEEECCCCChHHHHHhcc
Confidence 4333 334444444433 4777889999999999 9999999999999 45544 9999999999999999985
Q ss_pred hCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHh
Q 018797 294 GRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSR 331 (350)
Q Consensus 294 ~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~ 331 (350)
. .|++|+|+|+ ++.|+|+++++++|+.+|+.|++
T Consensus 692 ~--~~~~v~vG~~--~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 692 E--TAITVKVGPG--ESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred c--CceEEEECCC--CCcceEeCCCHHHHHHHHHHHhc
Confidence 2 2789999884 68999999999999999999875
No 9
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=3.9e-34 Score=301.95 Aligned_cols=244 Identities=24% Similarity=0.321 Sum_probs=194.3
Q ss_pred HHHHHHh-ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhcc-cCceEecc
Q 018797 63 DKMMKAA-KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY--FPTAIISGRSREKVMGFVEL-CNVYYAGS 138 (350)
Q Consensus 63 ~~~~~~~-~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~l-~~l~~i~~ 138 (350)
+.+.+++ ++++++||+||||||++.... ...++++++++|++|++. ..|+|+|||++..+.++++. ++++++|+
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDGTLlp~~~~--~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaE 662 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDGTLMPQASI--DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAE 662 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCCcccCCccc--cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEe
Confidence 5566555 479999999999999986532 457889999999999776 47999999999999999974 57899999
Q ss_pred CcceEeCCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhh
Q 018797 139 HGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREED 218 (350)
Q Consensus 139 nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~ 218 (350)
||++++.+++. .|+ ...+..+ ..|.+.+...++.++++++|+++|.+.+++.||||+++++.
T Consensus 663 HG~~ir~~~~~---~w~--------------~~~~~~~-~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~ 724 (854)
T PLN02205 663 HGYFLRLKRDV---EWE--------------TCVPVAD-CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDF 724 (854)
T ss_pred CCEEEEeCCCc---eee--------------ecchhhh-HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHH
Confidence 99999877542 131 0011111 24666666677888899999999999999999999987654
Q ss_pred H----HHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHH---cCCCCCCCcceEEEeCCCCCHHHHHH
Q 018797 219 Y----SILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDT---LGLSNPNDVLPLYIGDDRTDEDAFKV 291 (350)
Q Consensus 219 ~----~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~---lgi~~~~~~~vi~~GD~~ND~~Mf~~ 291 (350)
. .++.+.+++.+...+ +.+.+|+.++||+|+ ++|||.|++.|++. +|++.+ +++||||+.||++||++
T Consensus 725 ~~~qa~el~~~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~ 799 (854)
T PLN02205 725 GSCQAKELLDHLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEV 799 (854)
T ss_pred hhhhhHHHHHHHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHH
Confidence 3 245556666666554 778899999999999 99999999999864 577655 99999999999999999
Q ss_pred HHhCCC---------ceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHhcc
Q 018797 292 IKGRGQ---------GYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSRWR 333 (350)
Q Consensus 292 ~~~~~~---------g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~~~ 333 (350)
+..... +|+|.||. ++|.|.|.++++++|..+|+.|+...
T Consensus 800 ~~~~~~g~~~~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~~lL~~L~~~~ 848 (854)
T PLN02205 800 ITSSMAGPSIAPRAEVFACTVGQ--KPSKAKYYLDDTAEIVRLMQGLASVS 848 (854)
T ss_pred hhhhccCCcccccccceeEEECC--CCccCeEecCCHHHHHHHHHHHHhcc
Confidence 974211 37777874 57999999999999999999998643
No 10
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.2e-33 Score=295.92 Aligned_cols=254 Identities=14% Similarity=0.172 Sum_probs=197.3
Q ss_pred cHHHHHHHh-ccCCEEEEEecCcccCCCCCC---CCCCCCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhcccCce
Q 018797 61 SFDKMMKAA-KEKKIAVFLNYDGTLSPIVDD---PDRVFMSDEMRAAVREVAKY--FPTAIISGRSREKVMGFVELCNVY 134 (350)
Q Consensus 61 ~f~~~~~~~-~~k~~lif~D~DGTLl~~~~~---p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~l~~l~ 134 (350)
..+.+...+ +++++++||||||||+++..+ |....++++++++|++|+++ ..|+|+|||+.+.+.++++.++++
T Consensus 494 ~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~ 573 (797)
T PLN03063 494 PEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIW 573 (797)
T ss_pred CHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCc
Confidence 345666555 588999999999999998664 46678999999999999998 479999999999999999877899
Q ss_pred EeccCcceEeCCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecC
Q 018797 135 YAGSHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQV 214 (350)
Q Consensus 135 ~i~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~ 214 (350)
++|+||++++.+++. |.. ......+ ..|.+.+...++.+++++||+++|.|++++.||||++
T Consensus 574 l~aeHG~~~r~~~~~----w~~-------------~~~~~~~-~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~a 635 (797)
T PLN03063 574 LAAENGMFLRHTSGE----WVT-------------TMPEHMN-LDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYA 635 (797)
T ss_pred EEEeCCEEEecCCCc----eee-------------ccccccC-hhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCC
Confidence 999999999876543 310 0001101 3588889999999999999999999999999999998
Q ss_pred ChhhHHHHHHHHHHHH-hh---CCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCcceEEEeCCC-CCH
Q 018797 215 REEDYSILQEKAKAVL-RN---YPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGL---SNPNDVLPLYIGDDR-TDE 286 (350)
Q Consensus 215 ~~~~~~~~~~~l~~~l-~~---~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi---~~~~~~~vi~~GD~~-ND~ 286 (350)
+++.....+.++...+ +. .+++.+..|++++||+|. ++|||.|++.|++.+.. .....++++|+||+. .||
T Consensus 636 dp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DE 714 (797)
T PLN03063 636 DVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDE 714 (797)
T ss_pred ChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcH
Confidence 7654322222222222 22 235899999999999999 99999999999998621 111234999999985 599
Q ss_pred HHHHHHHhCC----------------------------CceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHhcccC
Q 018797 287 DAFKVIKGRG----------------------------QGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSRWRKS 335 (350)
Q Consensus 287 ~Mf~~~~~~~----------------------------~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~~~~~ 335 (350)
+||+++.... +-|+|.||. ++|.|.|.+++++||.++|..|+.-...
T Consensus 715 dmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 715 DVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred HHHHhccccccccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 9999986421 016677774 5799999999999999999999875433
No 11
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.2e-32 Score=289.94 Aligned_cols=256 Identities=18% Similarity=0.248 Sum_probs=198.5
Q ss_pred cHHHHHHHh-ccCCEEEEEecCcccCCCCCCCC---------CCCCCHHHHHHHHHHHhc--CCEEEEcCCChhhHHhhh
Q 018797 61 SFDKMMKAA-KEKKIAVFLNYDGTLSPIVDDPD---------RVFMSDEMRAAVREVAKY--FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 61 ~f~~~~~~~-~~k~~lif~D~DGTLl~~~~~p~---------~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~ 128 (350)
..+.+...+ ++++++|||||||||++++++|+ ...++++++++|++|+++ ..|+|+|||+.+.+.+++
T Consensus 578 ~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~f 657 (934)
T PLN03064 578 PPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657 (934)
T ss_pred CHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHh
Confidence 345665555 58999999999999999999987 567899999999999998 479999999999999999
Q ss_pred cccCceEeccCcceEeCCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEE
Q 018797 129 ELCNVYYAGSHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCIS 208 (350)
Q Consensus 129 ~l~~l~~i~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~ 208 (350)
+..+++++|+||++++.+++. |.. ......+ ..|.+.+...++.+++++||+++|.|++++.
T Consensus 658 g~~~L~LaAEHG~~~R~~~~~----w~~-------------~~~~~~~-~~W~~~v~~ile~~~eRtPGS~IE~K~~SLa 719 (934)
T PLN03064 658 GEFDMWLAAENGMFLRHTKGE----WMT-------------TMPEHLN-MDWVDSVKHVFEYFTERTPRSHFETRETSLV 719 (934)
T ss_pred CCCCceEEeeCCeEEecCCCc----cee-------------ccccccc-hHHHHHHHHHHHHHHhcCCCcEEEEcCcEEE
Confidence 877899999999999877553 320 0011111 3688889999999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHH-hh---CCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCC---CCCcceEEEeC
Q 018797 209 VHFRQVREEDYSILQEKAKAVL-RN---YPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSN---PNDVLPLYIGD 281 (350)
Q Consensus 209 ~~~r~~~~~~~~~~~~~l~~~l-~~---~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~---~~~~~vi~~GD 281 (350)
||||+++++.....+.++.+.+ .. .+++.+..|++++||+|. |+|||.|++.|++.+.-+. ...++++|+||
T Consensus 720 wHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD 798 (934)
T PLN03064 720 WNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH 798 (934)
T ss_pred EEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC
Confidence 9999987554333233333323 21 235899999999999999 9999999999999763111 12459999999
Q ss_pred CCC-CHHHHHHHHhCC----------------------------------------------------------------
Q 018797 282 DRT-DEDAFKVIKGRG---------------------------------------------------------------- 296 (350)
Q Consensus 282 ~~N-D~~Mf~~~~~~~---------------------------------------------------------------- 296 (350)
+.+ ||+||+++..--
T Consensus 799 d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (934)
T PLN03064 799 FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDR 878 (934)
T ss_pred CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCccc
Confidence 875 999999986310
Q ss_pred ------CceE---------EEEcCCCCCccceEEeCCHHHHHHHHHHHHhcccC
Q 018797 297 ------QGYP---------IIVSSTPKETKASYSLNDPSEVLTFLLRLSRWRKS 335 (350)
Q Consensus 297 ------~g~~---------Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~~~~~ 335 (350)
.|++ ++++.+.+.+.|.|.+++.++|..||+.|.+....
T Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 879 RPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 0111 33444466789999999999999999999876543
No 12
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.98 E-value=3.3e-31 Score=246.73 Aligned_cols=224 Identities=21% Similarity=0.255 Sum_probs=149.0
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCC
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPR 148 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~ 148 (350)
..++||+|+||||++ ++..++++++++|+++++. ++|+|+|||++..+.+++. +. ..++||+||+.|+.+ +
T Consensus 2 ~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~-~ 75 (264)
T COG0561 2 MIKLLAFDLDGTLLD-----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNG-G 75 (264)
T ss_pred CeeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecC-C
Confidence 468999999999999 3566999999999999988 6999999999999999874 21 238999999999998 4
Q ss_pred CcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccc-----------------eEEEEE
Q 018797 149 PVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRF-----------------CISVHF 211 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~-----------------~~~~~~ 211 (350)
..+... ... ...+.++...+... ............. ...+..
T Consensus 76 ~~i~~~-----------------~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (264)
T COG0561 76 ELLFQK-----------------PLS---REDVEELLELLEDF-QGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVG 134 (264)
T ss_pred cEEeee-----------------cCC---HHHHHHHHHHHHhc-cCceEEEEeccceeeccCCCcccccccccccccccc
Confidence 432110 011 11233333333211 0000000000000 000000
Q ss_pred ecCCh---------hhHHHHHHHHHH-HHhhCC--CcEEecC-CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEE
Q 018797 212 RQVRE---------EDYSILQEKAKA-VLRNYP--DFDLSEG-KKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLY 278 (350)
Q Consensus 212 r~~~~---------~~~~~~~~~l~~-~l~~~~--~l~v~~g-~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~ 278 (350)
..... .........+.+ +.+.++ .+.+.++ ..++||+|+ |+|||.||++|++.+|++.+ ++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~a 210 (264)
T COG0561 135 REAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVIA 210 (264)
T ss_pred cchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeEE
Confidence 00000 000112222222 223343 2445555 445999999 99999999999999999976 9999
Q ss_pred EeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--CHHHHHHHHHHHHh
Q 018797 279 IGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--DPSEVLTFLLRLSR 331 (350)
Q Consensus 279 ~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~~~eV~~~L~~l~~ 331 (350)
|||+.||++||+.+ |+||+|+||.++ ..|++++. +.+||+.+|++++.
T Consensus 211 fGD~~ND~~Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 211 FGDSTNDIEMLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred eCCccccHHHHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 99999999999999 999999999664 58888865 46799999998864
No 13
>PRK10976 putative hydrolase; Provisional
Probab=99.98 E-value=4.6e-31 Score=245.90 Aligned_cols=240 Identities=17% Similarity=0.149 Sum_probs=148.1
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~ 149 (350)
.+++|+|+||||++ ++..++++++++|++++++ ++|+|||||++..+.+++. +. ..++||+||+.|+.+.+.
T Consensus 2 ikli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLS-----PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 47999999999998 3467999999999999998 5899999999999888764 32 357899999999975554
Q ss_pred cccc-cCccc---cccCCCCC--Cc-eeeccccc-chh-HHHHHHHHHHHHHhhccCc---eeeecc-ceEEEEEecCCh
Q 018797 150 VKAC-EGKYH---TLVPGKKG--NE-VLFQPAKK-FLP-AIQEIIKELEEETKKIQGA---RIEDNR-FCISVHFRQVRE 216 (350)
Q Consensus 150 ~~~~-~~~~~---~~~~~~~~--~~-~~~~~~~~-~~~-~i~~v~~~l~~~~~~~~g~---~ve~~~-~~~~~~~r~~~~ 216 (350)
.+.. .-+.. .+...... .. +.+..... +.. ................... .++... ..+.+.. .+.
T Consensus 77 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~--~~~ 154 (266)
T PRK10976 77 LIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC--DSH 154 (266)
T ss_pred EehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc--CCH
Confidence 3321 10000 00000000 00 00000000 100 0000000010000000000 000011 1111111 111
Q ss_pred hhHHHHHHHHHHHHhhCCCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhC
Q 018797 217 EDYSILQEKAKAVLRNYPDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGR 295 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~ 295 (350)
+....+.+.+.+.+. ..+.+ .++..++||+|+ ++|||.||++|++++|++.+ ++++|||+.||++||+.+
T Consensus 155 ~~~~~~~~~l~~~~~--~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml~~a--- 225 (266)
T PRK10976 155 EKLLPLEQAINARWG--DRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEMLSMA--- 225 (266)
T ss_pred HHHHHHHHHHHHHhC--CcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHHHHc---
Confidence 222222233322221 23554 456789999999 99999999999999999987 999999999999999999
Q ss_pred CCceEEEEcCCCCC--ccce--EEeC--CHHHHHHHHHHHH
Q 018797 296 GQGYPIIVSSTPKE--TKAS--YSLN--DPSEVLTFLLRLS 330 (350)
Q Consensus 296 ~~g~~Vav~na~~~--t~A~--y~l~--~~~eV~~~L~~l~ 330 (350)
|+||||+||.++ ..|+ +++. +.+||+++|++++
T Consensus 226 --g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 226 --GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred --CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 999999999875 4665 7775 4678999999886
No 14
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.97 E-value=4.9e-31 Score=246.70 Aligned_cols=247 Identities=16% Similarity=0.191 Sum_probs=151.7
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-c-cCceEeccCcceEeCCCCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-L-CNVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l-~~l~~i~~nGa~I~~~~~~ 149 (350)
.+++|+|+||||++ ++..++++++++|++|+++ +.|+|||||++..+.+++. + ...++||+||+.|+...+.
T Consensus 2 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 46899999999998 3467999999999999999 5899999999999988764 2 2357899999999975554
Q ss_pred ccccc-Cc--cc-cccC---CCCCCceeecccccch-hHHHHHHHHHHHHHhhccCc---eee-eccceEEEEEecCChh
Q 018797 150 VKACE-GK--YH-TLVP---GKKGNEVLFQPAKKFL-PAIQEIIKELEEETKKIQGA---RIE-DNRFCISVHFRQVREE 217 (350)
Q Consensus 150 ~~~~~-~~--~~-~~~~---~~~~~~~~~~~~~~~~-~~i~~v~~~l~~~~~~~~g~---~ve-~~~~~~~~~~r~~~~~ 217 (350)
.+... -. .. .+.+ ........+....-+. .................... .+. .....+.+ .. +++
T Consensus 77 ~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~--~~-~~~ 153 (272)
T PRK15126 77 LLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICF--CG-DHD 153 (272)
T ss_pred EEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEE--EC-CHH
Confidence 32210 00 00 0000 0000000110000000 00001100000000000000 000 00111111 11 222
Q ss_pred hHHHHHHHHHHHHhhCCCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCC
Q 018797 218 DYSILQEKAKAVLRNYPDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRG 296 (350)
Q Consensus 218 ~~~~~~~~l~~~l~~~~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~ 296 (350)
....+.+.+.+.+. ..+.+ .++..++||+|+ ++|||.||++|++++|++.+ ++++|||+.||++||+.+
T Consensus 154 ~~~~~~~~l~~~~~--~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~a---- 223 (272)
T PRK15126 154 DLTRLQIQLNEALG--ERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGSV---- 223 (272)
T ss_pred HHHHHHHHHHHHhc--CCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHHc----
Confidence 22223333332221 13554 456679999999 99999999999999999987 999999999999999999
Q ss_pred CceEEEEcCCCCC--ccceE--EeC--CHHHHHHHHHHHHhcccCCCC
Q 018797 297 QGYPIIVSSTPKE--TKASY--SLN--DPSEVLTFLLRLSRWRKSSSS 338 (350)
Q Consensus 297 ~g~~Vav~na~~~--t~A~y--~l~--~~~eV~~~L~~l~~~~~~~~~ 338 (350)
|+||||+||.++ ..|+| ++. +.+||+++|++++....-.+|
T Consensus 224 -g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~~~~~~~~ 270 (272)
T PRK15126 224 -GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYS 270 (272)
T ss_pred -CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhcCCCCCCC
Confidence 999999999875 46776 665 467999999999865544443
No 15
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=7.4e-31 Score=244.94 Aligned_cols=238 Identities=14% Similarity=0.140 Sum_probs=147.3
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---cc--CceEeccCcceEeCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---LC--NVYYAGSHGMDILAP 146 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l~--~l~~i~~nGa~I~~~ 146 (350)
.++||+|+||||++ ++..++++++++|++|+++ ++|+|||||++..+.+++. +. ..++||+||+.|+.+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 58999999999998 3467999999999999999 5899999999999888763 32 247999999999864
Q ss_pred -CCCcccc-cCccc---c---ccCCCCCCceeecccccchh--HHHHHHHHHHHHHhhccCce-----eee-cc-ceEEE
Q 018797 147 -PRPVKAC-EGKYH---T---LVPGKKGNEVLFQPAKKFLP--AIQEIIKELEEETKKIQGAR-----IED-NR-FCISV 209 (350)
Q Consensus 147 -~~~~~~~-~~~~~---~---~~~~~~~~~~~~~~~~~~~~--~i~~v~~~l~~~~~~~~g~~-----ve~-~~-~~~~~ 209 (350)
.+..+.. .-+.. . ...........+....-|.. ..... ..........+... +.. .. ..+.+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYY-TVHESFLTGIPLVFREVEKMDPNLQFPKVMM 156 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchh-HHHhhhhccCCccccchhhccccCCceEEEE
Confidence 3432211 00000 0 00000000000000000000 00000 00000000000000 000 00 01111
Q ss_pred EEecCChhhHHHHHHHHHHHHhhCCCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHH
Q 018797 210 HFRQVREEDYSILQEKAKAVLRNYPDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDA 288 (350)
Q Consensus 210 ~~r~~~~~~~~~~~~~l~~~l~~~~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~M 288 (350)
+ . ..+....+.+.+.+.+. ..+.+ .++..++||+|+ |+|||.||++|++++|++.+ ++++|||+.||++|
T Consensus 157 -~-~-~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD~~NDi~M 227 (270)
T PRK10513 157 -I-D-EPEILDAAIARIPAEVK--ERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGDQENDIAM 227 (270)
T ss_pred -e-C-CHHHHHHHHHHhHHHhc--CcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHH
Confidence 1 1 11112222222222211 23554 456789999999 99999999999999999987 99999999999999
Q ss_pred HHHHHhCCCceEEEEcCCCCC--ccceEEeCC--HHHHHHHHHHHH
Q 018797 289 FKVIKGRGQGYPIIVSSTPKE--TKASYSLND--PSEVLTFLLRLS 330 (350)
Q Consensus 289 f~~~~~~~~g~~Vav~na~~~--t~A~y~l~~--~~eV~~~L~~l~ 330 (350)
|+.+ |+||||+||.++ ..|+|++.+ .+||+++|++++
T Consensus 228 l~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 9999 999999999885 689999864 578999999875
No 16
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.97 E-value=5.1e-30 Score=239.94 Aligned_cols=227 Identities=15% Similarity=0.257 Sum_probs=148.7
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---ccCceEeccCcceEeCC
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---LCNVYYAGSHGMDILAP 146 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l~~l~~i~~nGa~I~~~ 146 (350)
..+++||+|+||||++ ++..++++++++|++|+++ ++|+|||||++..+.+++. +...++||+||+.|+.+
T Consensus 5 ~~~~lI~~DlDGTLL~-----~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~ 79 (271)
T PRK03669 5 QDPLLIFTDLDGTLLD-----SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLD 79 (271)
T ss_pred CCCeEEEEeCccCCcC-----CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEec
Confidence 3578999999999998 2457899999999999998 6999999999999988763 33357999999999976
Q ss_pred CCCc-ccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHH---------------HhhccCce-----eee-cc
Q 018797 147 PRPV-KACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEE---------------TKKIQGAR-----IED-NR 204 (350)
Q Consensus 147 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~---------------~~~~~g~~-----ve~-~~ 204 (350)
.+.. ...+.. ....... +.+.++.+.+... .....+.. ++. ..
T Consensus 80 ~~~~~~~~~~~------------~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (271)
T PRK03669 80 EQWQDHPDFPR------------IISGISH---GEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHE 144 (271)
T ss_pred CcccCCCCceE------------eecCCCH---HHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccc
Confidence 4311 000000 0000000 0111111111100 00000000 000 00
Q ss_pred ceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCcceEEEeC
Q 018797 205 FCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGL---SNPNDVLPLYIGD 281 (350)
Q Consensus 205 ~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi---~~~~~~~vi~~GD 281 (350)
....+.+.. +++ ..+++.+.+... .+.++++..++||+|+ ++|||.||++|++++|+ +.+ ++++|||
T Consensus 145 ~~~~~~~~~-~~~----~~~~~~~~l~~~-~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viafGD 214 (271)
T PRK03669 145 ASVTLIWRD-SDE----RMAQFTARLAEL-GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGLGD 214 (271)
T ss_pred cCceeEecC-CHH----HHHHHHHHHHHC-CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEEcC
Confidence 111111211 111 122333334332 4666556579999999 99999999999999999 766 9999999
Q ss_pred CCCCHHHHHHHHhCCCceEEEEcCCCCC--------ccceEEeC--CHHHHHHHHHHHHhc
Q 018797 282 DRTDEDAFKVIKGRGQGYPIIVSSTPKE--------TKASYSLN--DPSEVLTFLLRLSRW 332 (350)
Q Consensus 282 ~~ND~~Mf~~~~~~~~g~~Vav~na~~~--------t~A~y~l~--~~~eV~~~L~~l~~~ 332 (350)
+.||++||+.+ |+||||+|+..+ ..|+|+++ +++|+.+.|++++..
T Consensus 215 s~NDi~Ml~~a-----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 215 GPNDAPLLDVM-----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred CHHHHHHHHhC-----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 99999999999 999999987632 26889987 567999999999864
No 17
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=4.9e-30 Score=233.66 Aligned_cols=214 Identities=18% Similarity=0.231 Sum_probs=146.7
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-c-cCceEeccCcceEeCCC-C
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-L-CNVYYAGSHGMDILAPP-R 148 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l-~~l~~i~~nGa~I~~~~-~ 148 (350)
.++||+||||||++ ++..++++++++|++|++. ++|+|||||++..+.+++. + .+.++|++||+.|+.+. +
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 47999999999998 3457999999999999988 5899999999999887653 2 13579999999998763 2
Q ss_pred CcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceee-ecc---ceEEEEEecCChhhHHHHHH
Q 018797 149 PVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIE-DNR---FCISVHFRQVREEDYSILQE 224 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve-~~~---~~~~~~~r~~~~~~~~~~~~ 224 (350)
..... .+ .+...++.+.+..........+.. ... ..+ ..++.. .. +
T Consensus 78 ~~~~~------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~----~ 127 (230)
T PRK01158 78 KRIFL------------------GD----IEECEKAYSELKKRFPEASTSLTKLDPDYRKTEV-ALRRTV---PV----E 127 (230)
T ss_pred CEEEE------------------cc----hHHHHHHHHHHHHhccccceeeecCCccccccee-eecccc---cH----H
Confidence 22110 00 011122222222111000000000 000 011 111111 11 2
Q ss_pred HHHHHHhhCC-CcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEE
Q 018797 225 KAKAVLRNYP-DFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIV 303 (350)
Q Consensus 225 ~l~~~l~~~~-~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav 303 (350)
.+.+.++.+. .+.+..+..++||.|+ +++||.|+++|++++|++.+ ++++|||+.||++||+.+ |++|+|
T Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam 198 (230)
T PRK01158 128 EVRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVAV 198 (230)
T ss_pred HHHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEEe
Confidence 2333444442 3555555678999999 99999999999999999877 999999999999999999 999999
Q ss_pred cCCCCC--ccceEEeCC--HHHHHHHHHHHH
Q 018797 304 SSTPKE--TKASYSLND--PSEVLTFLLRLS 330 (350)
Q Consensus 304 ~na~~~--t~A~y~l~~--~~eV~~~L~~l~ 330 (350)
+|+.++ ..|+|++.+ .+||+++|++++
T Consensus 199 ~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 199 ANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred cCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 999875 589999864 578999999874
No 18
>PLN02887 hydrolase family protein
Probab=99.96 E-value=2.7e-29 Score=255.08 Aligned_cols=247 Identities=17% Similarity=0.182 Sum_probs=150.8
Q ss_pred HHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---cc-C-------ce
Q 018797 67 KAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---LC-N-------VY 134 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l~-~-------l~ 134 (350)
..++.+.++||+|+||||++ ++..+++++++||++++++ +.|+|||||++..+..++. +. . .+
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p 376 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSP 376 (580)
T ss_pred hhhccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeeccc
Confidence 34677899999999999998 3568999999999999999 6899999999999887663 22 1 25
Q ss_pred EeccCcceEeCCCCCcccc-cCcc--c-cccC---CCCCCceeecccccchhHHHHHHHHHHHHHhhccCcee-------
Q 018797 135 YAGSHGMDILAPPRPVKAC-EGKY--H-TLVP---GKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARI------- 200 (350)
Q Consensus 135 ~i~~nGa~I~~~~~~~~~~-~~~~--~-~~~~---~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~v------- 200 (350)
+|++||+.|++..+..+.. .-.. . .+.. ........+....-|..........+........-..+
T Consensus 377 ~I~~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 456 (580)
T PLN02887 377 GVFLQGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLL 456 (580)
T ss_pred EEeecCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhh
Confidence 6778999998655543221 0000 0 0000 00000000100000100000000000000000000000
Q ss_pred eeccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEE
Q 018797 201 EDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYI 279 (350)
Q Consensus 201 e~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~ 279 (350)
...... .+-+...++.....+.+.+.+.+. ..+.+ .++..++||+|+ |+|||.||++|++++|++.+ ++++|
T Consensus 457 ~~~~i~-Ki~~~~~~e~~~~~l~~~l~~~~~--~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~e---eviAF 529 (580)
T PLN02887 457 AAADIQ-KVIFLDTAEGVSSVLRPYWSEATG--DRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSPD---EIMAI 529 (580)
T ss_pred cccCee-EEEEEcChHHHHHHHHHHHHHHhc--CcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCHH---HEEEE
Confidence 000111 111111111111122222222221 13554 456789999999 99999999999999999987 99999
Q ss_pred eCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--CHHHHHHHHHHHH
Q 018797 280 GDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--DPSEVLTFLLRLS 330 (350)
Q Consensus 280 GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~~~eV~~~L~~l~ 330 (350)
||+.||++||+.+ |+||||+||.++ ..|+|++. +.+||+.+|++++
T Consensus 530 GDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 530 GDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred ecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999 999999999875 68999986 4578999999874
No 19
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.96 E-value=2e-28 Score=223.42 Aligned_cols=211 Identities=25% Similarity=0.378 Sum_probs=143.0
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhccc--CceEeccCcceEeCCCCCccc
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVELC--NVYYAGSHGMDILAPPRPVKA 152 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l~--~l~~i~~nGa~I~~~~~~~~~ 152 (350)
||+|+||||++ ++..++++++++|++|++. ++++|+|||++..+.+++... ..++|++||+.|..+.+..+.
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence 79999999999 3466999999999999988 689999999999999988532 368999999999555554332
Q ss_pred ccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHH-------------------------hhccCcee-------
Q 018797 153 CEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEET-------------------------KKIQGARI------- 200 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~-------------------------~~~~g~~v------- 200 (350)
.+. .. ...+.++.+.+...- ........
T Consensus 76 ~~~-----------------i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (254)
T PF08282_consen 76 EKP-----------------ID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDD 135 (254)
T ss_dssp EES-----------------B----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHH
T ss_pred hhh-----------------ee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccc
Confidence 110 00 011111111111100 00000000
Q ss_pred --eeccceEEEEEecCChhhHHHHHHHHHHHHhhCCC-cE-EecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcce
Q 018797 201 --EDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPD-FD-LSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLP 276 (350)
Q Consensus 201 --e~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~-l~-v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~v 276 (350)
......+.++ .+.+....+.+.+.+. +++ +. +.++..++||.|+ ++|||.|+++|++.+|++.+ ++
T Consensus 136 ~~~~~i~ki~~~---~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~~ 205 (254)
T PF08282_consen 136 LEDEEIFKILFF---PDPEDLEQLREELKKK---FPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---DI 205 (254)
T ss_dssp HHCSSESEEEEE---SCHHHHHHHHHHHHHH---HTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---GE
T ss_pred cccccceeeecc---ccchhhhhhhhhhccc---cCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---ee
Confidence 0011222211 1222233333333333 333 23 3567899999999 99999999999999999987 99
Q ss_pred EEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCCH--HHHHHHH
Q 018797 277 LYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLNDP--SEVLTFL 326 (350)
Q Consensus 277 i~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~~--~eV~~~L 326 (350)
++|||+.||++||+.+ |+||+|+|+.++ ..|+|++.+. ++|+++|
T Consensus 206 ~~~GD~~ND~~Ml~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 206 IAFGDSENDIEMLELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp EEEESSGGGHHHHHHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred EEeecccccHhHHhhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 9999999999999999 999999999875 5899998743 6888775
No 20
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.96 E-value=3.6e-29 Score=224.11 Aligned_cols=200 Identities=25% Similarity=0.342 Sum_probs=143.2
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhcccCceEeccCcceEeCCCCCcccc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVELCNVYYAGSHGMDILAPPRPVKAC 153 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l~~l~~i~~nGa~I~~~~~~~~~~ 153 (350)
+|++||||||++. +...++++++++|++|+++ .+++|+|||++..+..+++..+.+++++||+.|+.+++.....
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc
Confidence 5899999999983 2257999999999999999 6899999999999999886445889999999999765432110
Q ss_pred cCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecC--ChhhHHHHHHHHHHHHh
Q 018797 154 EGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQV--REEDYSILQEKAKAVLR 231 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~--~~~~~~~~~~~l~~~l~ 231 (350)
+. .....+..+.+++...+..+....++..+|.+..++.++++.. .......+.+.++....
T Consensus 77 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (204)
T TIGR01484 77 PS----------------DVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGR 140 (204)
T ss_pred cc----------------ccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhcc
Confidence 00 0000011111222222222223455667788888899998764 11112223333333211
Q ss_pred hCCCcEEe-cCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEE
Q 018797 232 NYPDFDLS-EGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIV 303 (350)
Q Consensus 232 ~~~~l~v~-~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav 303 (350)
.++++.+. ++..++||+|+ +++||.|+++++++++++.+ ++++|||+.||++||+.+ |++|+|
T Consensus 141 ~~~~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 141 NDLELEAIYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred ccCcEEEEEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 13457777 68999999999 99999999999999998876 999999999999999999 899987
No 21
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.96 E-value=8.1e-28 Score=224.30 Aligned_cols=239 Identities=14% Similarity=0.176 Sum_probs=145.8
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-c-cCceEeccCcceEeCC-CC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-L-CNVYYAGSHGMDILAP-PR 148 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l-~~l~~i~~nGa~I~~~-~~ 148 (350)
.++||+|+||||++ ++..++++++++|++++++ +.|+|||||++..+..++. + ...++||+||+.|+.. ++
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 57999999999998 3467999999999999999 5899999999999888764 2 2357999999999975 34
Q ss_pred Ccccc-cCcc---cccc---CCCCCCceeecccccch-hHHHHHHHHHHHHHhhcc---Cc-e--ee-------eccceE
Q 018797 149 PVKAC-EGKY---HTLV---PGKKGNEVLFQPAKKFL-PAIQEIIKELEEETKKIQ---GA-R--IE-------DNRFCI 207 (350)
Q Consensus 149 ~~~~~-~~~~---~~~~---~~~~~~~~~~~~~~~~~-~~i~~v~~~l~~~~~~~~---g~-~--ve-------~~~~~~ 207 (350)
..+.. +-.. ..+. .........+....-+. .....+... ..+....+ .. + +. .....+
T Consensus 78 ~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T PRK10530 78 KVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRT-LNWAQTLPPEQRPTFTQVDSLAQAARQVNAIW 156 (272)
T ss_pred EEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHH-hhhhhccchhcccceEEcccHHHHHhhcCCcE
Confidence 33221 1000 0000 00000000000000000 000000000 00000000 00 0 00 000001
Q ss_pred EEEEecCChhhHHHHHHHHHHHHhhCCCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCH
Q 018797 208 SVHFRQVREEDYSILQEKAKAVLRNYPDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDE 286 (350)
Q Consensus 208 ~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~ 286 (350)
.+.....+. ..+.+..+.+.+.+ ++.+ .++..++||.|+ +++||.|++++++++|++.+ ++++|||+.||+
T Consensus 157 ~i~~~~~~~---~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~GD~~NDi 228 (272)
T PRK10530 157 KFALTHEDL---PQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFGDNFNDI 228 (272)
T ss_pred EEEEecCCH---HHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeCCChhhH
Confidence 111111111 11222222233333 3443 345568999999 99999999999999999977 999999999999
Q ss_pred HHHHHHHhCCCceEEEEcCCCCC--ccceEEeCC--HHHHHHHHHHHH
Q 018797 287 DAFKVIKGRGQGYPIIVSSTPKE--TKASYSLND--PSEVLTFLLRLS 330 (350)
Q Consensus 287 ~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~--~~eV~~~L~~l~ 330 (350)
+||+.+ |+||+|+|+.++ ..|+|++.+ .+||+++|++++
T Consensus 229 ~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 229 SMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999 999999999764 589999864 578999999875
No 22
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.96 E-value=9e-28 Score=222.03 Aligned_cols=227 Identities=18% Similarity=0.192 Sum_probs=153.2
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---ccc-CceEeccCcceEeCCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFV---ELC-NVYYAGSHGMDILAPP 147 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~l~-~l~~i~~nGa~I~~~~ 147 (350)
+.+|++||||||+++.+ . +..++++++++++++.++ ++|++||||++..+..+. +++ +.++|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~-~-~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-G-DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCC-C-ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence 57899999999998532 1 356889999999999988 499999999999998884 432 3468999999998754
Q ss_pred CCcc-cccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHH
Q 018797 148 RPVK-ACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKA 226 (350)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l 226 (350)
.... ..|.. .....+. ...+......+....+....+.+.+.+.+.+. .+....+.+.+
T Consensus 79 ~~~~~~~~~~---------------~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l 138 (249)
T TIGR01485 79 AEVPDQHWAE---------------YLSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQL 138 (249)
T ss_pred CCcCCHHHHH---------------HHhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHH
Confidence 2211 01110 0011111 12222222111111122223334455555432 22223345556
Q ss_pred HHHHhhCC-CcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc
Q 018797 227 KAVLRNYP-DFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS 304 (350)
Q Consensus 227 ~~~l~~~~-~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~ 304 (350)
.+.+..+. .+.+ .++..++||+|+ +++||.|+++|++.+|++.+ .+++|||+.||++||+.+. +++|+|+
T Consensus 139 ~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~~----~~~va~~ 210 (249)
T TIGR01485 139 TEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIGS----VRGVIVS 210 (249)
T ss_pred HHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHccC----CcEEEEC
Confidence 66665542 2443 567789999999 99999999999999999877 9999999999999999841 6899999
Q ss_pred CCCCCc--c-------ceEEeC--CHHHHHHHHHHH
Q 018797 305 STPKET--K-------ASYSLN--DPSEVLTFLLRL 329 (350)
Q Consensus 305 na~~~t--~-------A~y~l~--~~~eV~~~L~~l 329 (350)
|+.++. . +.|+++ .++|+++.|+++
T Consensus 211 na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 211 NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 997642 2 227776 468999999875
No 23
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.96 E-value=3.8e-28 Score=220.31 Aligned_cols=212 Identities=16% Similarity=0.189 Sum_probs=139.8
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCCccc
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRPVKA 152 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~~~~ 152 (350)
|++|+||||++ ++..++++++++|++|++. ++|+|||||++..+..++. +. ..++|++||+.|+...+...
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~- 74 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDD- 74 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCce-
Confidence 58999999998 3467999999999999999 5999999999999888764 32 46899999999987653211
Q ss_pred ccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHHhh
Q 018797 153 CEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVLRN 232 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~ 232 (350)
.|. . ..... +................-....... +.......+. + .+..+++.
T Consensus 75 ~~~--------------~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~----~~~~~~~~ 127 (225)
T TIGR01482 75 IFL--------------A-YLEEE---WFLDIVIAKTFPFSRLKVQYPRRAS--LVKMRYGIDV---D----TVREIIKE 127 (225)
T ss_pred EEe--------------c-ccCHH---HHHHHHHhcccchhhhccccccccc--eEEEeecCCH---H----HHHHHHHh
Confidence 010 0 00111 1111000000000000000000000 1011111111 1 12223333
Q ss_pred CC-CcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--
Q 018797 233 YP-DFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE-- 309 (350)
Q Consensus 233 ~~-~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~-- 309 (350)
+. .+.+.++..++||+|+ +++||.|+++|++++|++.+ ++++|||+.||++||+.+ |++|+|+||.++
T Consensus 128 ~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~~k 198 (225)
T TIGR01482 128 LGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPELK 198 (225)
T ss_pred cCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHHHH
Confidence 32 2333355679999999 99999999999999999977 999999999999999999 999999999875
Q ss_pred ccceEEeCC--HHH----HHHHHHHH
Q 018797 310 TKASYSLND--PSE----VLTFLLRL 329 (350)
Q Consensus 310 t~A~y~l~~--~~e----V~~~L~~l 329 (350)
..|+|++.+ .++ |.++|+++
T Consensus 199 ~~A~~vt~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 199 EWADYVTESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred HhcCeecCCCCCCcHHHHHHHHHHhh
Confidence 689999864 467 88888765
No 24
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.95 E-value=8.1e-28 Score=217.39 Aligned_cols=207 Identities=19% Similarity=0.305 Sum_probs=140.5
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCCc
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRPV 150 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~~ 150 (350)
++||+|+||||++ +++.++++++++|++|++. .+|+|+|||++..+..++. +. ..++|++||+.|+.+.+.+
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 6899999999998 3467999999999999998 5899999999999888764 22 3479999999999865332
Q ss_pred ccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHH
Q 018797 151 KACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVL 230 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l 230 (350)
.. + .....+. ....... .+......... ......+. ......+ .+++.+
T Consensus 77 ~~-~-----------------~~~~~~~--~~~~~~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~----~~~~~l 125 (215)
T TIGR01487 77 FL-A-----------------NMEEEWF--LDEEKKK--RFPRDRLSNEY--PRASLVIM---REGKDVD----EVREII 125 (215)
T ss_pred EE-e-----------------cccchhh--HHHhhhh--hhhhhhccccc--ceeEEEEe---cCCccHH----HHHHHH
Confidence 10 0 0000000 0000000 00000000000 00111111 1111122 233344
Q ss_pred hhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC-
Q 018797 231 RNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE- 309 (350)
Q Consensus 231 ~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~- 309 (350)
+.. ++.+..+..++||+|. +++||.|++++++.+|++.+ .+++|||+.||++||+.+ |++|+|+|+.++
T Consensus 126 ~~~-~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~~~ 195 (215)
T TIGR01487 126 KER-GLNLVDSGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADDQL 195 (215)
T ss_pred HhC-CeEEEecCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccHHH
Confidence 433 5665555678999999 99999999999999999876 899999999999999999 999999999875
Q ss_pred -ccceEEeCC--HHHHHHHH
Q 018797 310 -TKASYSLND--PSEVLTFL 326 (350)
Q Consensus 310 -t~A~y~l~~--~~eV~~~L 326 (350)
..|+|++.+ .++|+++|
T Consensus 196 k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 196 KEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHhCCEEcCCCCCchhhhhC
Confidence 589999864 46788764
No 25
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.95 E-value=7.2e-27 Score=216.80 Aligned_cols=220 Identities=16% Similarity=0.204 Sum_probs=141.2
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCCcc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRPVK 151 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~~~ 151 (350)
+||+|+||||++. +..+.++++++|++|++. ++++|+|||++..+..++. +. ..++||+||+.|+.+.+...
T Consensus 1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCccc
Confidence 5899999999983 232445799999999998 6999999999999988774 22 35899999999998654321
Q ss_pred cccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHH---------------hhccCcee------eeccceEEEE
Q 018797 152 ACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEET---------------KKIQGARI------EDNRFCISVH 210 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~---------------~~~~g~~v------e~~~~~~~~~ 210 (350)
.. ..++ +...-+. ..+.++.+.+.... ....+... ........+.
T Consensus 76 ~~------------~~~~-~~~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (256)
T TIGR01486 76 EP------------EYPV-IALGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETIL 141 (256)
T ss_pred CC------------CeEE-EEcCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCcee
Confidence 00 0000 0000000 11112211111000 00000000 0000111111
Q ss_pred EecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCC--CCCCcceEEEeCCCCCHHH
Q 018797 211 FRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLS--NPNDVLPLYIGDDRTDEDA 288 (350)
Q Consensus 211 ~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~--~~~~~~vi~~GD~~ND~~M 288 (350)
+ +. ...+.+.+.+... ++.++.+..++||.|+ +++||.|+++|++.+|++ .+ ++++|||+.||++|
T Consensus 142 ~---~~----~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND~~M 209 (256)
T TIGR01486 142 W---SE----ERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPNDLPL 209 (256)
T ss_pred c---Ch----HHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhhHHH
Confidence 1 11 1223344444443 4666555579999999 999999999999999998 66 99999999999999
Q ss_pred HHHHHhCCCceEEEEcCCCC---C--cc--c-eEEeC--CHHHHHHHHHHHH
Q 018797 289 FKVIKGRGQGYPIIVSSTPK---E--TK--A-SYSLN--DPSEVLTFLLRLS 330 (350)
Q Consensus 289 f~~~~~~~~g~~Vav~na~~---~--t~--A-~y~l~--~~~eV~~~L~~l~ 330 (350)
|+.+ |+||+|+|+.+ + .. | +|++. +.+||++.|++++
T Consensus 210 l~~a-----g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 210 LEVV-----DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred HHHC-----CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 9999 99999999973 2 33 4 48885 4689999999874
No 26
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.95 E-value=2.1e-27 Score=217.68 Aligned_cols=216 Identities=19% Similarity=0.187 Sum_probs=146.5
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---cc-CceEeccCcceEeCCCCC
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---LC-NVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l~-~l~~i~~nGa~I~~~~~~ 149 (350)
+|++||||||++ ++..+++.+ ++++ +.++ .+++|+|||++..+.+++. +. +.++||+||+.|+.+...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 589999999998 245677766 7776 5555 6899999999999999874 32 346999999999765421
Q ss_pred c-ccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeecc--ceEEEEEecCChhhHHHHHHHH
Q 018797 150 V-KACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNR--FCISVHFRQVREEDYSILQEKA 226 (350)
Q Consensus 150 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~--~~~~~~~r~~~~~~~~~~~~~l 226 (350)
. ...|. . .....+. ..++ .......++..++... ....++|+..++.. ...+++
T Consensus 74 ~~~~~~~--------------~-~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 130 (236)
T TIGR02471 74 QPDRFWQ--------------K-HIDHDWR--RQAV----VEALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQI 130 (236)
T ss_pred CCChhHH--------------H-HHhcCCC--HHHH----HHHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHH
Confidence 1 00010 0 0001111 1122 2233445666555443 13455665433211 112333
Q ss_pred HHHHhhCC-CcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc
Q 018797 227 KAVLRNYP-DFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS 304 (350)
Q Consensus 227 ~~~l~~~~-~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~ 304 (350)
.+.+..+. .+.+ .++..++||+|+ +++||.|+++|++++|++.+ .+++|||+.||++||+.+ |+||+|+
T Consensus 131 ~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~ 201 (236)
T TIGR02471 131 RQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVG 201 (236)
T ss_pred HHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEc
Confidence 44444332 2333 456678999999 99999999999999999876 999999999999999998 9999999
Q ss_pred CCCCC--ccce----EEeCC--HHHHHHHHHHH
Q 018797 305 STPKE--TKAS----YSLND--PSEVLTFLLRL 329 (350)
Q Consensus 305 na~~~--t~A~----y~l~~--~~eV~~~L~~l 329 (350)
|+.++ ..|+ |++.+ .+||+++|+++
T Consensus 202 na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 202 NHDPELEGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 99875 4677 88764 57899999875
No 27
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.95 E-value=2.9e-27 Score=219.22 Aligned_cols=232 Identities=19% Similarity=0.292 Sum_probs=141.1
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCCcc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRPVK 151 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~~~ 151 (350)
++|+|+||||++ ++..++++++++|++|+++ ++|+|||||++..+.+++. +. ..++||+||+.|+...+..+
T Consensus 1 li~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLN-----DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 589999999998 3467999999999999999 6899999999999888764 32 34899999999998754332
Q ss_pred ccc-Ccc--c-ccc---CCCCCCceeecccccc-----hhHHHHHHHHHHHHHhhccC-ceeeeccceEEEEEecCChhh
Q 018797 152 ACE-GKY--H-TLV---PGKKGNEVLFQPAKKF-----LPAIQEIIKELEEETKKIQG-ARIEDNRFCISVHFRQVREED 218 (350)
Q Consensus 152 ~~~-~~~--~-~~~---~~~~~~~~~~~~~~~~-----~~~i~~v~~~l~~~~~~~~g-~~ve~~~~~~~~~~r~~~~~~ 218 (350)
... -+. . .+. .........+....-| .+.................. ...........+.+ .+.+.
T Consensus 76 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 153 (256)
T TIGR00099 76 YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLF--LDPED 153 (256)
T ss_pred eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEE--CCHHH
Confidence 110 000 0 000 0000000000000000 00000000000000000000 00000111111111 11111
Q ss_pred HHHHHHHHHHHHh--hC-CCcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHh
Q 018797 219 YSILQEKAKAVLR--NY-PDFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKG 294 (350)
Q Consensus 219 ~~~~~~~l~~~l~--~~-~~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~ 294 (350)
. +.+.+.+. .+ +.+.+ .++..++||+|+ ++|||.|++++++.+|++.+ ++++|||+.||++||+.+
T Consensus 154 ~----~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~nD~~m~~~~-- 223 (256)
T TIGR00099 154 L----DLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMNDIEMLEAA-- 223 (256)
T ss_pred H----HHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHHhHHHHHhC--
Confidence 2 22333333 12 24554 467789999999 99999999999999999877 999999999999999999
Q ss_pred CCCceEEEEcCCCCC--ccceEEeCC--HHHHHHHH
Q 018797 295 RGQGYPIIVSSTPKE--TKASYSLND--PSEVLTFL 326 (350)
Q Consensus 295 ~~~g~~Vav~na~~~--t~A~y~l~~--~~eV~~~L 326 (350)
|++|+|+|+.++ ..|+|++.+ .+||+++|
T Consensus 224 ---~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 224 ---GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ---CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 999999998764 579999864 46788764
No 28
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.94 E-value=8.5e-26 Score=211.64 Aligned_cols=232 Identities=16% Similarity=0.242 Sum_probs=146.1
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~ 149 (350)
.++||+|+||||++. +..++++++++|++|.+. ++++|||||++..+..++. +. ..+++|+||+.|+.+++.
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 579999999999983 356789999999999998 6899999999999888764 21 347999999999875432
Q ss_pred cccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHh---------------hccCcee---e---eccceEE
Q 018797 150 VKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETK---------------KIQGARI---E---DNRFCIS 208 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~---------------~~~g~~v---e---~~~~~~~ 208 (350)
... . .+. ......+++...+ -+ .+...++...+..... ...+... + .......
T Consensus 79 ~~~--~-~~~-~~~~~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PRK00192 79 FPF--Q-PDG-ERLKGDYWVIELG-PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP 152 (273)
T ss_pred ccc--C-Ccc-ccccCCceEEEcC-CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc
Confidence 100 0 000 0000001111000 00 0112222222111000 0000000 0 0000000
Q ss_pred EEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCC-CCCcceEEEeCCCCCHH
Q 018797 209 VHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSN-PNDVLPLYIGDDRTDED 287 (350)
Q Consensus 209 ~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~-~~~~~vi~~GD~~ND~~ 287 (350)
+.+.. . ....+.+.+.++.+ ++.+..+..++||.|. + +||+|+++|++.+|++. + ++++|||+.||++
T Consensus 153 ~~~~~-~----~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~NDi~ 221 (273)
T PRK00192 153 FLWNG-S----EAAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPNDLP 221 (273)
T ss_pred eeecC-c----hHHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhhHH
Confidence 10000 1 12233344445444 4666666789999999 9 99999999999999998 7 9999999999999
Q ss_pred HHHHHHhCCCceEEEEcCCCCCc------cc-eEEe--C--CHHHHHHHHHHHHh
Q 018797 288 AFKVIKGRGQGYPIIVSSTPKET------KA-SYSL--N--DPSEVLTFLLRLSR 331 (350)
Q Consensus 288 Mf~~~~~~~~g~~Vav~na~~~t------~A-~y~l--~--~~~eV~~~L~~l~~ 331 (350)
||+.+ |++|+|+||.++. .| ++++ . +.+||++.|++++.
T Consensus 222 m~~~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 222 MLEAA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHHhC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 99999 9999999998752 33 4666 3 46799999998864
No 29
>PLN02382 probable sucrose-phosphatase
Probab=99.93 E-value=5e-25 Score=217.16 Aligned_cols=233 Identities=18% Similarity=0.154 Sum_probs=150.8
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHH-HHHHhc-CCEEEEcCCChhhHHhhh---cc-cCceEeccCcceE
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAV-REVAKY-FPTAIISGRSREKVMGFV---EL-CNVYYAGSHGMDI 143 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL-~~L~~~-~~v~I~SGR~~~~v~~~~---~l-~~l~~i~~nGa~I 143 (350)
...+.+|++||||||++.. ++..++.....++ +++.++ ..++++|||+...+.++. .+ .+.++|++||+.|
T Consensus 6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 4678999999999999842 1246776666666 777777 589999999977776654 33 2446888899999
Q ss_pred eCCCCCcc-cccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHH
Q 018797 144 LAPPRPVK-ACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSIL 222 (350)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~ 222 (350)
+..+.... ..|... ....+.. ..+.+.+..+.........+.....+.++... +....+
T Consensus 83 ~~~~~~~~d~~w~~~---------------l~~~w~~--~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~---~~~~~~ 142 (413)
T PLN02382 83 AYGESMVPDHGWVEY---------------LNKKWDR--EIVVEETSKFPELKLQPETEQRPHKVSFYVDK---KKAQEV 142 (413)
T ss_pred EeCCCCccChhHHHH---------------HhccCCh--hhHHHHHhcCCCcccCCcccCCCeEEEEEech---HHhHHH
Confidence 86442211 112100 0111111 11222221110001112223344555554432 222344
Q ss_pred HHHHHHHHhhCC-CcEE-ecCCeEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCcceEEEeCCCCCHHHHHHHHhCCC
Q 018797 223 QEKAKAVLRNYP-DFDL-SEGKKVMEIRPSIEWDKGHALEYLLDTL---GLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQ 297 (350)
Q Consensus 223 ~~~l~~~l~~~~-~l~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~l---gi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~ 297 (350)
.+.+.+.+.... .+.+ .++..++||.|+ +++||.||++|++++ |++.+ .+++|||+.||++||+.+
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a----- 213 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP----- 213 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC-----
Confidence 455555554431 3443 577789999999 999999999999999 88876 999999999999999999
Q ss_pred c-eEEEEcCCCCCc----------cceEEeC---CHHHHHHHHHHHHhccc
Q 018797 298 G-YPIIVSSTPKET----------KASYSLN---DPSEVLTFLLRLSRWRK 334 (350)
Q Consensus 298 g-~~Vav~na~~~t----------~A~y~l~---~~~eV~~~L~~l~~~~~ 334 (350)
| +||+|+||.++. .|++++. +++||.++|+++.-...
T Consensus 214 g~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~~ 264 (413)
T PLN02382 214 DVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGPN 264 (413)
T ss_pred CCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCCC
Confidence 8 899999998642 2345532 46899999998874443
No 30
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.93 E-value=1.2e-24 Score=197.31 Aligned_cols=194 Identities=17% Similarity=0.261 Sum_probs=123.5
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---ccCceEeccCcceEeCCCCC-
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---LCNVYYAGSHGMDILAPPRP- 149 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l~~l~~i~~nGa~I~~~~~~- 149 (350)
+||+|+||||++. +..++++++++|++|++. ++|+|||||++..+..++. +...++||+||+.|+.+...
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 5899999999983 344566699999999998 5999999999999988764 33268999999999986432
Q ss_pred cccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHH---------------hhccCce------eeeccceEE
Q 018797 150 VKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEET---------------KKIQGAR------IEDNRFCIS 208 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~---------------~~~~g~~------ve~~~~~~~ 208 (350)
....|.. ....... ..+.++.+.+.... ....+.. .+.......
T Consensus 76 ~~~~~~~------------~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (221)
T TIGR02463 76 EEPGYPR------------IILGISY---GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVP 140 (221)
T ss_pred cCCCceE------------EecCCCH---HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcc
Confidence 1110000 0000000 11112211111100 0000000 000011111
Q ss_pred EEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHH
Q 018797 209 VHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDA 288 (350)
Q Consensus 209 ~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~M 288 (350)
+... .+. ...+.+++.++.. ++.+.++..++||.|+ +++||.|++++++++|++.+ ++++|||+.||++|
T Consensus 141 ~~~~-~~~----~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~m 210 (221)
T TIGR02463 141 LLWR-DSD----SRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLPL 210 (221)
T ss_pred EEec-Cch----hHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHHH
Confidence 1110 111 2223344455444 4666666789999999 99999999999999999987 99999999999999
Q ss_pred HHHHHhCCCceEEEE
Q 018797 289 FKVIKGRGQGYPIIV 303 (350)
Q Consensus 289 f~~~~~~~~g~~Vav 303 (350)
|+.+ |+|||+
T Consensus 211 l~~a-----g~~va~ 220 (221)
T TIGR02463 211 LEVA-----DYAVVI 220 (221)
T ss_pred HHhC-----CceEEe
Confidence 9999 999997
No 31
>PTZ00174 phosphomannomutase; Provisional
Probab=99.92 E-value=2.2e-24 Score=199.35 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=123.3
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhccc---C-ceEeccCcceEeC
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVELC---N-VYYAGSHGMDILA 145 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l~---~-l~~i~~nGa~I~~ 145 (350)
.+.++|++|+||||++ ++..++++++++|+++++. +.|+|||||++..+.+.++.. . .++||+||+.|+.
T Consensus 3 ~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 4678999999999998 4578999999999999999 689999999999999888632 2 3679999999996
Q ss_pred CCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHH-----hhccCceeeeccceEEEEE-ecCC-hhh
Q 018797 146 PPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEET-----KKIQGARIEDNRFCISVHF-RQVR-EED 218 (350)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~-----~~~~g~~ve~~~~~~~~~~-r~~~-~~~ 218 (350)
. +..++. ..+...-+ ...+.++.+.+.... ....+.+++.......+.+ .... ...
T Consensus 78 ~-~~~i~~---------------~~i~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (247)
T PTZ00174 78 D-GELFHS---------------QSILKFLG-EEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEE 140 (247)
T ss_pred C-CeEEEE---------------EcchhcCC-HHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHH
Confidence 3 332210 00000000 123344444332210 0111222222110011110 0000 000
Q ss_pred --------H-HHHHHHHHHHH-hhCCCcE--Eec-CCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeC----
Q 018797 219 --------Y-SILQEKAKAVL-RNYPDFD--LSE-GKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGD---- 281 (350)
Q Consensus 219 --------~-~~~~~~l~~~l-~~~~~l~--v~~-g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD---- 281 (350)
. ....+++.+.+ +.++++. ..+ +..++||+|+ |+|||.||++|++.+ + ++++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~~----~---eviafGD~~~~ 212 (247)
T PTZ00174 141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLENDF----K---EIHFFGDKTFE 212 (247)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhhh----h---hEEEEcccCCC
Confidence 0 01112222223 3344433 333 4579999999 999999999999982 3 9999999
Q ss_pred CCCCHHHHHHHHhCCCceEEEEcCCCC
Q 018797 282 DRTDEDAFKVIKGRGQGYPIIVSSTPK 308 (350)
Q Consensus 282 ~~ND~~Mf~~~~~~~~g~~Vav~na~~ 308 (350)
+.||++||+.++. -|++|+|+++
T Consensus 213 ~~NDieMl~~~~~----~g~~v~n~~~ 235 (247)
T PTZ00174 213 GGNDYEIYNDPRT----IGHSVKNPED 235 (247)
T ss_pred CCCcHhhhhcCCC----ceEEeCCHHH
Confidence 8999999997632 2344447654
No 32
>PLN02423 phosphomannomutase
Probab=99.92 E-value=1.4e-23 Score=193.68 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=132.9
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhccc---C-ceEeccCcceEeCC
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVELC---N-VYYAGSHGMDILAP 146 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l~---~-l~~i~~nGa~I~~~ 146 (350)
..++++|+|+||||++ ++..++++++++|++|++++.|+|||||++..+.+.++.. . .+++++||+.|...
T Consensus 5 ~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 5 KPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKD 79 (245)
T ss_pred ccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeC
Confidence 4456777999999998 3567999999999999988889999999999998877532 1 47899999999853
Q ss_pred CCCcccccCccccccCCCCCCceeecccccch--hHHHHHHHHHHHHHh-----hccCceeeeccceEEEE--EecCChh
Q 018797 147 PRPVKACEGKYHTLVPGKKGNEVLFQPAKKFL--PAIQEIIKELEEETK-----KIQGARIEDNRFCISVH--FRQVREE 217 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~v~~~l~~~~~-----~~~g~~ve~~~~~~~~~--~r~~~~~ 217 (350)
+ ..++. .+-..++ ..+.++.+.++.... ...+.+++.....+.+. +.++...
T Consensus 80 g-~~i~~------------------~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~ 140 (245)
T PLN02423 80 G-KLIGT------------------QSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQE 140 (245)
T ss_pred C-EEEEE------------------ecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHh
Confidence 3 32210 0000001 223444444333211 12244444322221111 1111111
Q ss_pred ------hH---H-HHHHHHHHHHhhCCCcEE--e-cCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeC---
Q 018797 218 ------DY---S-ILQEKAKAVLRNYPDFDL--S-EGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGD--- 281 (350)
Q Consensus 218 ------~~---~-~~~~~l~~~l~~~~~l~v--~-~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD--- 281 (350)
.+ . ...+....+.+.++++.+ + +|..++||+|+ |+|||.||+.|+ +.+ ++++|||
T Consensus 141 ~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~~---e~~aFGD~~~ 211 (245)
T PLN02423 141 ERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DFD---EIHFFGDKTY 211 (245)
T ss_pred HHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----CcC---eEEEEeccCC
Confidence 01 1 111222233344655443 3 45689999999 999999999999 444 9999999
Q ss_pred -CCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHH
Q 018797 282 -DRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLS 330 (350)
Q Consensus 282 -~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~ 330 (350)
+.||++||+.-. -.+++| .+|+++.+.|.+++
T Consensus 212 ~~~ND~eMl~~~~----~~~~~~-------------~~~~~~~~~~~~~~ 244 (245)
T PLN02423 212 EGGNDHEIFESER----TIGHTV-------------TSPDDTREQCTALF 244 (245)
T ss_pred CCCCcHHHHhCCC----cceEEe-------------CCHHHHHHHHHHhc
Confidence 799999999741 245554 77888888888764
No 33
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.9e-23 Score=213.27 Aligned_cols=229 Identities=27% Similarity=0.343 Sum_probs=185.4
Q ss_pred HHHHHHh-ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhh-cccCceEecc
Q 018797 63 DKMMKAA-KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF--PTAIISGRSREKVMGFV-ELCNVYYAGS 138 (350)
Q Consensus 63 ~~~~~~~-~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~-~l~~l~~i~~ 138 (350)
+.+...+ ++++++|++|||||+.+.. |..+...|+.|+.++ .++|+|||++..+...+ +.++++++++
T Consensus 492 ~~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aE 563 (732)
T KOG1050|consen 492 EHIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAE 563 (732)
T ss_pred hHhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecc
Confidence 3444444 5999999999998888732 222899999999984 69999999999997654 6789999999
Q ss_pred CcceEeCCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhh
Q 018797 139 HGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREED 218 (350)
Q Consensus 139 nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~ 218 (350)
||++++.+.+ |. ... .+ ++|.+.+.++++.+++++||+++|.++..+.|||++++.+.
T Consensus 564 hG~f~r~~~~-----w~--------------~~~--~~-~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~ 621 (732)
T KOG1050|consen 564 HGYFVRIPGK-----WE--------------TCV--LD-LDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEF 621 (732)
T ss_pred cCceeccCCc-----ee--------------eec--cc-ccHHHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcch
Confidence 9999999876 42 111 12 46889999999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHhh-CCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCC
Q 018797 219 YSILQEKAKAVLRN-YPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQ 297 (350)
Q Consensus 219 ~~~~~~~l~~~l~~-~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~ 297 (350)
...++.++.+.+.. ...+.+..|+..+|++|. |++||.|+..++..+. .+.++++|+||+.+|++||.++.....
T Consensus 622 g~~qA~el~~~l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~---~~~df~~c~g~d~tDed~~~~~~~~~~ 697 (732)
T KOG1050|consen 622 GELQAKELLEHLESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMV---KEPDFVLCIGDDRTDEDMFEFISKAKD 697 (732)
T ss_pred hHHHHHHHHHHhcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHhcC---CCcceEEEecCCCChHHHHHHHhhccC
Confidence 65555555555544 225888999999999999 9999999999999998 234599999999999999999976432
Q ss_pred ------ceEEEEcCCCCCccceEEeCCHHHHHHHHH
Q 018797 298 ------GYPIIVSSTPKETKASYSLNDPSEVLTFLL 327 (350)
Q Consensus 298 ------g~~Vav~na~~~t~A~y~l~~~~eV~~~L~ 327 (350)
-|.++||. +.+.|+|.+.++.+|.+.|.
T Consensus 698 ~~~~~~~F~~~~g~--~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 698 PEKVEEIFACTVGQ--KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred CcccceEEEEEcCC--CCcccccccCChHHHHhhcc
Confidence 24455554 78999999999999998875
No 34
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.91 E-value=5e-24 Score=196.84 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=135.2
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc---c-cCceEeccCcceEeCC
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE---L-CNVYYAGSHGMDILAP 146 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---l-~~l~~i~~nGa~I~~~ 146 (350)
.+++|++|+||||++ .+.....++.+.++...+. +.++++|||+...+.+++. + .+.++||++|+.|+..
T Consensus 1 ~~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLID-----GDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBH-----CHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcC-----CCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEc
Confidence 368999999999992 1122334444444411222 5799999999999998763 3 3578999999999983
Q ss_pred CCC-cccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCce----eeeccceEEEEEecCChhhHHH
Q 018797 147 PRP-VKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGAR----IEDNRFCISVHFRQVREEDYSI 221 (350)
Q Consensus 147 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~----ve~~~~~~~~~~r~~~~~~~~~ 221 (350)
... ....|.. .....|.. ..+.+.+ ...++.. .+.+.+.+++.++.... ..
T Consensus 76 ~~~~~d~~w~~---------------~i~~~w~~--~~v~~~l----~~~~~l~~q~~~~q~~~k~sy~~~~~~~---~~ 131 (247)
T PF05116_consen 76 ENWQPDEEWQA---------------HIDERWDR--ERVEEIL----AELPGLRPQPESEQRPFKISYYVDPDDS---AD 131 (247)
T ss_dssp STTEE-HHHHH---------------HHHTT--H--HHHHHHH----HCHCCEEEGGCCCGCCTCECEEEETTSH---CH
T ss_pred CCCcChHHHHH---------------HHHhcCCh--HHHHHHH----HHhhCcccCCccccCCeeEEEEEecccc---hh
Confidence 321 1111211 01112211 3333333 3334432 23445677777654332 24
Q ss_pred HHHHHHHHHhhCCCc--EE-ecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCc
Q 018797 222 LQEKAKAVLRNYPDF--DL-SEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQG 298 (350)
Q Consensus 222 ~~~~l~~~l~~~~~l--~v-~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g 298 (350)
+.+.+++.++.. ++ .+ .++...++|.|. +++||.||++|+++++++.+ .++++|||.||++||... .
T Consensus 132 ~~~~i~~~l~~~-~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~ 201 (247)
T PF05116_consen 132 ILEEIRARLRQR-GLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----D 201 (247)
T ss_dssp HHHHHHHHHHCC-TCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----S
T ss_pred HHHHHHHHHHHc-CCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----C
Confidence 456677777665 34 33 467789999999 99999999999999999976 999999999999999666 7
Q ss_pred eEEEEcCCCCC--------cc-ce--EEeCC--HHHHHHHHHHH
Q 018797 299 YPIIVSSTPKE--------TK-AS--YSLND--PSEVLTFLLRL 329 (350)
Q Consensus 299 ~~Vav~na~~~--------t~-A~--y~l~~--~~eV~~~L~~l 329 (350)
.+|+|+|+.++ .. .. |+.+. ..||++-|+.+
T Consensus 202 ~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~~ 245 (247)
T PF05116_consen 202 HGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQHF 245 (247)
T ss_dssp EEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHHT
T ss_pred CEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHHc
Confidence 89999999776 11 12 55543 46888877653
No 35
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.90 E-value=5.5e-22 Score=201.64 Aligned_cols=232 Identities=18% Similarity=0.212 Sum_probs=142.1
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-c-cCceEeccCcceEeCCC
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-L-CNVYYAGSHGMDILAPP 147 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l-~~l~~i~~nGa~I~~~~ 147 (350)
-++++||+|+||||++. +..++++++++|++|+++ ++|+|||||++..+..+++ + ...++||+||+.|+.+.
T Consensus 414 ~~~KLIfsDLDGTLLd~-----d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNP-----LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred ceeeEEEEECcCCCcCC-----CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 47899999999999983 346778999999999998 6899999999999888764 2 13579999999999876
Q ss_pred CCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHh-------hccCceeee------------------
Q 018797 148 RPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETK-------KIQGARIED------------------ 202 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~-------~~~g~~ve~------------------ 202 (350)
+... .+.. .+....+.+.+...-++ ..+.++.+.+.+... ...+.++..
T Consensus 489 ~~~~-~~~~----~~~~~~~~iI~~~~l~~-e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~ 562 (694)
T PRK14502 489 DYFR-LPFA----YDRVAGNYLVIELGMAY-KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLK 562 (694)
T ss_pred Cccc-cccc----ccccCCCeEEEEcCCCH-HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHH
Confidence 5210 0000 00000111122111111 122333332222100 000011100
Q ss_pred -------ccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcc
Q 018797 203 -------NRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVL 275 (350)
Q Consensus 203 -------~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~ 275 (350)
+.+...+.+.. + .+..+.+.+.+++. ++.+..++.++||. + ++|||.||++|++.+|++.+ .
T Consensus 563 ~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~---e 631 (694)
T PRK14502 563 QAELAKQREYSETVHIEG-D----KRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG---N 631 (694)
T ss_pred HHHHHhhccCceeEEEcC-C----HHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc---c
Confidence 00001111110 1 12334455555554 57777799999998 6 89999999999999999875 6
Q ss_pred eEEE--eCCCCCHHHHHHHHhCCCceEEEEcCCCCCc------cceEEeC--CHHHHHHHHHHHH
Q 018797 276 PLYI--GDDRTDEDAFKVIKGRGQGYPIIVSSTPKET------KASYSLN--DPSEVLTFLLRLS 330 (350)
Q Consensus 276 vi~~--GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t------~A~y~l~--~~~eV~~~L~~l~ 330 (350)
+++| ||+.||++||+++ |+||+|++...+- ... .++ .|.|=.+.+.+++
T Consensus 632 ViafalGDs~NDisMLe~A-----g~gVAM~~~~~~~~~l~~~~~~-~~~~~GP~GW~eai~~~L 690 (694)
T PRK14502 632 IHTFGLGDSENDYSMLETV-----DSPILVQRPGNKWHKMRLRNPS-YVKGVGPEGFSRAVTDII 690 (694)
T ss_pred eEEEEcCCcHhhHHHHHhC-----CceEEEcCCCCCCCccCCCCce-ecCCCCcHHHHHHHHHHH
Confidence 6666 9999999999999 9999997754321 111 222 4666555555554
No 36
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.88 E-value=5.4e-22 Score=180.87 Aligned_cols=203 Identities=23% Similarity=0.341 Sum_probs=118.2
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-cc-CceEeccCcceEeCCCCCcc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-LC-NVYYAGSHGMDILAPPRPVK 151 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l~-~l~~i~~nGa~I~~~~~~~~ 151 (350)
++|+|+||||++. ..++++++++|++|++. ++++|+|||++..+..++. +. ..++||+||+.|+.+.....
T Consensus 1 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~ 74 (225)
T TIGR02461 1 VIFTDLDGTLLPP------GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFP 74 (225)
T ss_pred CEEEeCCCCCcCC------CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCcccc
Confidence 5899999999982 23567899999999998 6899999999999888764 21 34799999999998753110
Q ss_pred cccCccccccCCCCCCceeecccccchhHHHHHHHHHHH-H------------HhhccCceee------eccceEEEEEe
Q 018797 152 ACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEE-E------------TKKIQGARIE------DNRFCISVHFR 212 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~-~------------~~~~~g~~ve------~~~~~~~~~~r 212 (350)
+... ........+.+...-+ ...+.++.+.+.+ + .....+...+ ...+.-.+ +.
T Consensus 75 --~~~~---~~~~~~~~~i~~~~l~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~-~~ 147 (225)
T TIGR02461 75 --FPVG---AGREVGNYEVIELGKP-VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI-FL 147 (225)
T ss_pred --cccc---ccccCCCeEEEEcCCC-HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc-cC
Confidence 0000 0000000011110000 0112222222221 0 0000000000 00000000 11
Q ss_pred cCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 213 QVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 213 ~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
. +.+.+.. +.+.++. .++.+.++..++++ +. ++|||.|+++|++.+++... ...+++|||+.||++||+.+
T Consensus 148 ~-~~e~~~~----~~~~~~~-~~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~a 218 (225)
T TIGR02461 148 W-SREGWEA----ILVTARA-RGLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVV 218 (225)
T ss_pred C-CHHHHHH----HHHHHHH-cCCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhC
Confidence 1 1111222 2222333 25777777677775 67 99999999999999977432 23899999999999999999
Q ss_pred HhCCCceEEEEc
Q 018797 293 KGRGQGYPIIVS 304 (350)
Q Consensus 293 ~~~~~g~~Vav~ 304 (350)
|+||+|+
T Consensus 219 -----g~~v~v~ 225 (225)
T TIGR02461 219 -----DLAFLVG 225 (225)
T ss_pred -----CCcEecC
Confidence 9999985
No 37
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.88 E-value=3.4e-21 Score=178.63 Aligned_cols=205 Identities=15% Similarity=0.157 Sum_probs=131.8
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-c-cCceEeccCcceEeCCCCC
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE-L-CNVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-l-~~l~~i~~nGa~I~~~~~~ 149 (350)
.++||+||||||+++ +..++++++++|++|+++ ++|+++|||++..+..++. + ...++|++||+.|+.|.+.
T Consensus 1 ~KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~ 75 (302)
T PRK12702 1 MRLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHY 75 (302)
T ss_pred CcEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcccc
Confidence 478999999999994 346788999999999998 6999999999999888764 2 1348999999999988652
Q ss_pred ccc-----ccCccccccCCCCCCceeecccccchh---HHHHHHHHHH-----------HHHhhccCceee------ecc
Q 018797 150 VKA-----CEGKYHTLVPGKKGNEVLFQPAKKFLP---AIQEIIKELE-----------EETKKIQGARIE------DNR 204 (350)
Q Consensus 150 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~v~~~l~-----------~~~~~~~g~~ve------~~~ 204 (350)
... .|. .....+ .+.....+.. .++++...+. +.+....|.-.+ .+.
T Consensus 76 ~~~~~~~~~~~-------~~~~~~-~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re 147 (302)
T PRK12702 76 FPAGILDEQWQ-------HRPPYY-VCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKRE 147 (302)
T ss_pred ccccccccccc-------cCCCce-EEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhcc
Confidence 200 000 000111 1122222211 1222221110 001112222111 233
Q ss_pred ceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEc---------------------CCCCCHHHHHHHHH
Q 018797 205 FCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRP---------------------SIEWDKGHALEYLL 263 (350)
Q Consensus 205 ~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p---------------------~~~~~KG~Al~~Ll 263 (350)
++..+.+...+. .+ .+.+++. ++.++.|..++.+.. . +++||.|+++|.
T Consensus 148 ~SEp~~w~~~~~----~~----~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~ 217 (302)
T PRK12702 148 YSEIFSYSGDPA----RL----REAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLL 217 (302)
T ss_pred CCcceEecCCHH----HH----HHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHH
Confidence 444454443221 11 4445554 688888877877764 3 679999999999
Q ss_pred HHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC
Q 018797 264 DTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST 306 (350)
Q Consensus 264 ~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na 306 (350)
+.+.-.. ....+|++|||.||++||+++ .++|.|.+.
T Consensus 218 ~~y~~~~-~~~~tiaLGDspND~~mLe~~-----D~~vvi~~~ 254 (302)
T PRK12702 218 DCYQRHL-GPIKALGIGCSPPDLAFLRWS-----EQKVVLPSP 254 (302)
T ss_pred HHHHhcc-CCceEEEecCChhhHHHHHhC-----CeeEEecCC
Confidence 9987653 345999999999999999999 799998553
No 38
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1.9e-22 Score=208.24 Aligned_cols=324 Identities=27% Similarity=0.311 Sum_probs=242.8
Q ss_pred CCCCCccccCCCCCCC----CCCCCchHHhHHH-hhCCCCCCcHHHHHHHhccCCEEEEEecCcccCCCCCCCCCCCCCH
Q 018797 24 NGGDHSINERTTSNPP----DSVTSDASYNSWM-MEHPSALGSFDKMMKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSD 98 (350)
Q Consensus 24 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~al~~f~~~~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~ 98 (350)
++++.+...+|.+... +.......+..|+ -.+|+++++||.+......+++|.++|+||||.++..+|++++++.
T Consensus 135 ve~~~~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~ 214 (732)
T KOG1050|consen 135 VEVYEEGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLST 214 (732)
T ss_pred HHhccCCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHH
Confidence 3455667778877643 3344555689999 7899999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEcCCChhh----------HHhhhcccCceEeccCcceEeCCCC-CcccccCccccccCCCCC-
Q 018797 99 EMRAAVREVAKYFPTAIISGRSREK----------VMGFVELCNVYYAGSHGMDILAPPR-PVKACEGKYHTLVPGKKG- 166 (350)
Q Consensus 99 ~~~~aL~~L~~~~~v~I~SGR~~~~----------v~~~~~l~~l~~i~~nGa~I~~~~~-~~~~~~~~~~~~~~~~~~- 166 (350)
.+|.+..+.++.++.++++||++.. +.+++.+.++++++++|++|..+.+ ..+..-...+..+.....
T Consensus 215 c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~K 294 (732)
T KOG1050|consen 215 CSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLK 294 (732)
T ss_pred HHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHH
Confidence 9999999999999999999999887 7888888899999999999998762 211000000000000000
Q ss_pred CceeecccccchhHHHHHHHHHHHHHhhccCceeeeccceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEE
Q 018797 167 NEVLFQPAKKFLPAIQEIIKELEEETKKIQGARIEDNRFCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVME 246 (350)
Q Consensus 167 ~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~ve~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lE 246 (350)
.....++..++.+|+.++.........++++..+++.+++++.|+++++...+....+.+..+...+|.+.+..+..+.|
T Consensus 295 l~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vae 374 (732)
T KOG1050|consen 295 LLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAE 374 (732)
T ss_pred HHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhh
Confidence 00011222233334333322222223345566667778899999998887766544455555556666677788889999
Q ss_pred EEcCCCCCHHHHHHHHHHHcCCCC--CCCcceEEEeCCCCCHHHHHHHHhC-CCceEEEEcCCCCCccceEEeCCHHHHH
Q 018797 247 IRPSIEWDKGHALEYLLDTLGLSN--PNDVLPLYIGDDRTDEDAFKVIKGR-GQGYPIIVSSTPKETKASYSLNDPSEVL 323 (350)
Q Consensus 247 I~p~~~~~KG~Al~~Ll~~lgi~~--~~~~~vi~~GD~~ND~~Mf~~~~~~-~~g~~Vav~na~~~t~A~y~l~~~~eV~ 323 (350)
++|.+.|.||.++..+...++... +.++...++||+.+|++.+..++.. ..+++++|+.+...+.+.+.++++..+.
T Consensus 375 v~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~ 454 (732)
T KOG1050|consen 375 VCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYK 454 (732)
T ss_pred heeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhh
Confidence 999999999999999999988876 6778999999999999999999877 4578999999888889999999988887
Q ss_pred H-HHHHHHhcccCCCCchhhhhhhccC
Q 018797 324 T-FLLRLSRWRKSSSSSKQLAQIWGIG 349 (350)
Q Consensus 324 ~-~L~~l~~~~~~~~~~~~~~~~~~~~ 349 (350)
. ++..+..|.+.... .|-.+|++|
T Consensus 455 ~v~~~~~~~W~~~~~~--~l~~~~~~~ 479 (732)
T KOG1050|consen 455 YVSTHDVVYWAKSFLQ--GLKRIWKVG 479 (732)
T ss_pred hhcchhHHHHHHHHHH--hhhhhhhhc
Confidence 7 78888888766555 677788876
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.64 E-value=7.8e-15 Score=129.07 Aligned_cols=206 Identities=18% Similarity=0.244 Sum_probs=124.7
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh---hcccCceEeccCcceEeCCC
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGF---VELCNVYYAGSHGMDILAPP 147 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~---~~l~~l~~i~~nGa~I~~~~ 147 (350)
-..+||+|+||||+++.-+| +.....+.+|.+. ++|+.||.+++.++..+ +++++.++|++||+.|+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCCCCC------CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 45799999999999954333 2346677888887 69999999999887665 57778999999999999987
Q ss_pred CCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhccCcee-----------------e------ecc
Q 018797 148 RPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKIQGARI-----------------E------DNR 204 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~~g~~v-----------------e------~~~ 204 (350)
+..-.. .......-+. ..+.-..+..+.+.+... +.+-|... | .+.
T Consensus 80 ~~~~~~---------~~~r~~~g~~-~~elg~~l~~ire~l~kL-ee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 80 GWFPFD---------GKPREISGIS-HIELGKVLEKIREKLDKL-EEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cccccC---------CCCceecceE-eeehhhhHHHHHHHHHHH-HHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 642110 0000000000 001111223333332211 11112100 0 011
Q ss_pred ceEEEEEecCChhhHHHHHHHHHHHHhhCCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCC
Q 018797 205 FCISVHFRQVREEDYSILQEKAKAVLRNYPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRT 284 (350)
Q Consensus 205 ~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N 284 (350)
++.++..|..+ .....+...|..- +++++.|..+..+... ...||.|+.++++.+..-.+. ..++++||+.|
T Consensus 149 yseti~~rs~d-----~~~~~~~~~L~e~-glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~n 220 (274)
T COG3769 149 YSETIIWRSSD-----ERMAQFTARLNER-GLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGDGPN 220 (274)
T ss_pred hhhheeecccc-----hHHHHHHHHHHhc-CceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCCCCC
Confidence 11122222111 1112233334433 6888888777777776 567999999999986443321 15999999999
Q ss_pred CHHHHHHHHhCCCceEEEEcCCC
Q 018797 285 DEDAFKVIKGRGQGYPIIVSSTP 307 (350)
Q Consensus 285 D~~Mf~~~~~~~~g~~Vav~na~ 307 (350)
|.+||+++ .+.+.|++-.
T Consensus 221 D~Pl~ev~-----d~AfiV~~ln 238 (274)
T COG3769 221 DAPLLEVM-----DYAFIVKGLN 238 (274)
T ss_pred cccHHHhh-----hhheeecccc
Confidence 99999999 7999998643
No 40
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.54 E-value=3.7e-13 Score=116.71 Aligned_cols=216 Identities=19% Similarity=0.287 Sum_probs=139.7
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhcc---c-CceEeccCcceEe
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVEL---C-NVYYAGSHGMDIL 144 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l---~-~l~~i~~nGa~I~ 144 (350)
++-.+.|+.+|.||||++ .+..+++++.+.|++|.+...+.++-|..++++.+.++. . -.|..++||..-+
T Consensus 7 ~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~y 81 (252)
T KOG3189|consen 7 ARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAY 81 (252)
T ss_pred hcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEe
Confidence 345668999999999999 368899999999999999999999999999999998863 2 3578899999877
Q ss_pred CCCCCcccccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhh-----ccCceeeeccceEEEE--EecCChh
Q 018797 145 APPRPVKACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKK-----IQGARIEDNRFCISVH--FRQVREE 217 (350)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~-----~~g~~ve~~~~~~~~~--~r~~~~~ 217 (350)
..+...-. +.+...+.++ .++++......|+.. -.|.++|.+.-.+.+. -|++..+
T Consensus 82 k~gk~~~~--------------Qsi~~~LGee---~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 82 KGGKLLSK--------------QSIINHLGEE---KLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred eCCcchhH--------------HHHHHHHhHH---HHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 65543210 0010011211 123333222233332 3588888766554443 3544433
Q ss_pred hH-------------HHHHHHHHHHHhhCCCcEEe-cCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeC--
Q 018797 218 DY-------------SILQEKAKAVLRNYPDFDLS-EGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGD-- 281 (350)
Q Consensus 218 ~~-------------~~~~~~l~~~l~~~~~l~v~-~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD-- 281 (350)
.. +.+.+.+++.++++ ++++. -|...+||-|. ||+|-+.|++|-.. |++ .+.+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~-gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT 216 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEALREEFADY-GLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKT 216 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHhccc-CeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEecccc
Confidence 11 12333444444444 56764 46889999999 99999999998765 665 8999999
Q ss_pred --CCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHHHHHHHHHHHh
Q 018797 282 --DRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSEVLTFLLRLSR 331 (350)
Q Consensus 282 --~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~eV~~~L~~l~~ 331 (350)
+.||-+.|.--+ .--+++.+|++..+.++.++.
T Consensus 217 ~~GGNDyEIf~dpr-----------------tiGhsV~~PdDT~~~~~~if~ 251 (252)
T KOG3189|consen 217 MPGGNDYEIFADPR-----------------TIGHSVTSPDDTVRICEEIFK 251 (252)
T ss_pred CCCCCcceeeeCCc-----------------cccccccCchHHHHHHHHHhc
Confidence 456766554332 122344566666666666543
No 41
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.38 E-value=6.7e-12 Score=111.82 Aligned_cols=191 Identities=19% Similarity=0.251 Sum_probs=120.9
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhhHHhhhc-c---c-CceEeccCcceEeCCCCCcccccCccccccCCCCCCceeeccc
Q 018797 100 MRAAVREVAKYFPTAIISGRSREKVMGFVE-L---C-NVYYAGSHGMDILAPPRPVKACEGKYHTLVPGKKGNEVLFQPA 174 (350)
Q Consensus 100 ~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~-l---~-~l~~i~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (350)
|.+.|++|.+...|+|+||-.+.++.+.+. . . ..|+.++||...+..+... |.. .+.....
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~---~~~-----------~~~~~lg 66 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELI---WSQ-----------SIAEFLG 66 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEE---EE-------------HHHHHH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCch---hhH-----------hHHHHcC
Confidence 678999999999999999999999999883 2 1 3489999999988765432 100 0000111
Q ss_pred ccchhHHHHHHHHHHHHHh-----hccCceeeeccceEEEEE--ecCChhh---HH------HHHHHHH-HHHhhCCC--
Q 018797 175 KKFLPAIQEIIKELEEETK-----KIQGARIEDNRFCISVHF--RQVREED---YS------ILQEKAK-AVLRNYPD-- 235 (350)
Q Consensus 175 ~~~~~~i~~v~~~l~~~~~-----~~~g~~ve~~~~~~~~~~--r~~~~~~---~~------~~~~~l~-~~l~~~~~-- 235 (350)
+ ...+++.+.+..++. ...|.+||++.-.+++.. |+++.+. |. .+++.+. .+-+++|+
T Consensus 67 e---e~~~~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~ 143 (220)
T PF03332_consen 67 E---EKLQKLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFG 143 (220)
T ss_dssp H---HHHHHHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCS
T ss_pred H---HHHHHHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCc
Confidence 1 122333333333322 235889999988888763 4444321 21 1233333 33345775
Q ss_pred cEEe-cCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeC----CCCCHHHHHHHHhCCCceEEEEcCCCCCc
Q 018797 236 FDLS-EGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGD----DRTDEDAFKVIKGRGQGYPIIVSSTPKET 310 (350)
Q Consensus 236 l~v~-~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD----~~ND~~Mf~~~~~~~~g~~Vav~na~~~t 310 (350)
+++. -|...+||.|+ ||||..+|++|.+.. ++ .+++||| +.||-++|...+ -.|++
T Consensus 144 L~~siGGqiSiDvfp~-GwDKty~Lr~l~~~~-~~-----~I~FfGDkt~pGGNDyei~~~~r----t~g~~-------- 204 (220)
T PF03332_consen 144 LTFSIGGQISIDVFPK-GWDKTYCLRHLEDEG-FD-----EIHFFGDKTFPGGNDYEIFEDPR----TIGHT-------- 204 (220)
T ss_dssp EEEEEETTTEEEEEET-T-SGGGGGGGTTTTT--S-----EEEEEESS-STTSTTHHHHHSTT----SEEEE--------
T ss_pred eEEecCCceEEccccC-CccHHHHHHHHHhcc-cc-----eEEEEehhccCCCCCceeeecCC----ccEEE--------
Confidence 6664 56899999999 999999999987643 32 9999999 679999988653 23554
Q ss_pred cceEEeCCHHHHHHHHHHHHh
Q 018797 311 KASYSLNDPSEVLTFLLRLSR 331 (350)
Q Consensus 311 ~A~y~l~~~~eV~~~L~~l~~ 331 (350)
+.+|++.++.|++|+.
T Consensus 205 -----V~~p~DT~~~l~~l~~ 220 (220)
T PF03332_consen 205 -----VTSPEDTIKQLKELFF 220 (220)
T ss_dssp ------SSHHHHHHHHHHHHH
T ss_pred -----eCCHHHHHHHHHHHhC
Confidence 4788999999988863
No 42
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.35 E-value=1.3e-11 Score=131.96 Aligned_cols=187 Identities=12% Similarity=0.143 Sum_probs=110.6
Q ss_pred CCEEEE--EecCcccCCCCCCCCCCCCCHHHHHHHHHHHh--c---CCEEEEcCCChhhHHhhh---ccc---CceEecc
Q 018797 72 KKIAVF--LNYDGTLSPIVDDPDRVFMSDEMRAAVREVAK--Y---FPTAIISGRSREKVMGFV---ELC---NVYYAGS 138 (350)
Q Consensus 72 k~~lif--~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~--~---~~v~I~SGR~~~~v~~~~---~l~---~l~~i~~ 138 (350)
.+++++ +|+|.| +. +.+..++.++.+.+ . +.|+++|||+...+.+++ ++| +.++||+
T Consensus 769 ~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~ 838 (1050)
T TIGR02468 769 RKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICN 838 (1050)
T ss_pred cceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Confidence 345555 999999 22 11222222333321 1 469999999999999987 354 4689999
Q ss_pred CcceEeCCCC------Ccc--cccCccccccCCCCCCceeecccccchhHHHHHHHHHHHHHhhc--------cCceee-
Q 018797 139 HGMDILAPPR------PVK--ACEGKYHTLVPGKKGNEVLFQPAKKFLPAIQEIIKELEEETKKI--------QGARIE- 201 (350)
Q Consensus 139 nGa~I~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~--------~g~~ve- 201 (350)
-|++|+.+.. ... ..|+. .....|. -+.+.+.+......+ ++...+
T Consensus 839 vGTeIyy~~~~~~~~~~~~~D~~w~~---------------hI~~rW~--ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~ 901 (1050)
T TIGR02468 839 SGSELYYPSLNGSEEGKLVADQDYHS---------------HIEYRWG--GEGLRKTLVKWAASINEKKGENEEQIVEED 901 (1050)
T ss_pred CCcceeccCcCCCCCCCceECHHHHH---------------HHHccCC--cHHHHHHHHHHhhhcccccccccccceecC
Confidence 9999998731 110 01110 1111221 122333333322211 223333
Q ss_pred ---eccceEEEEEecCChhhHHHHHHHHHHHHhhCC-CcEE-e-cCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcc
Q 018797 202 ---DNRFCISVHFRQVREEDYSILQEKAKAVLRNYP-DFDL-S-EGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVL 275 (350)
Q Consensus 202 ---~~~~~~~~~~r~~~~~~~~~~~~~l~~~l~~~~-~l~v-~-~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~ 275 (350)
...+|+++...+.+. ....+++++.|.... ..++ + ++..+|+|.|. .++||.||++|+.+||++.+ .
T Consensus 902 ~~~q~~~k~SY~v~d~~~---~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~ 974 (1050)
T TIGR02468 902 EESSTDHCYAFKVKDPSK---VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---N 974 (1050)
T ss_pred hhhCCCceEEEEecCccc---CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---H
Confidence 345788775333221 123345555555542 2333 2 45689999999 99999999999999999987 7
Q ss_pred e-EEEeCCCC-C-HHHHHHH
Q 018797 276 P-LYIGDDRT-D-EDAFKVI 292 (350)
Q Consensus 276 v-i~~GD~~N-D-~~Mf~~~ 292 (350)
+ +++||+.| | ++|+.-+
T Consensus 975 v~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 975 MAVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred eEEEeccCCCCCHHHHhCCc
Confidence 7 55999999 9 5565433
No 43
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.19 E-value=7.3e-11 Score=101.32 Aligned_cols=72 Identities=24% Similarity=0.238 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCCH--HH-HHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLNDP--SE-VLTFLLR 328 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~~--~e-V~~~L~~ 328 (350)
+|..+++.+++++|++.+ .++++||+.||++|++.+ |++++|.++... ..|+|++.++ +| +.++++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 578899999999999877 999999999999999999 899999998654 5789999865 34 9999999
Q ss_pred HHhcc
Q 018797 329 LSRWR 333 (350)
Q Consensus 329 l~~~~ 333 (350)
+++..
T Consensus 148 ~~~~~ 152 (154)
T TIGR01670 148 LLLAQ 152 (154)
T ss_pred HHHhh
Confidence 88753
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.12 E-value=1.5e-10 Score=102.23 Aligned_cols=56 Identities=27% Similarity=0.386 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN 317 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~ 317 (350)
+|..+++.+++.+|++.+ ++++|||+.||++|++.+ |++++|+++.+. ..|+|++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 467889999999999877 999999999999999999 999999876543 47899986
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.02 E-value=1.1e-10 Score=111.87 Aligned_cols=67 Identities=21% Similarity=0.214 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCC--HHHHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLND--PSEVLTFLL 327 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~--~~eV~~~L~ 327 (350)
+-.|+.+++.+++.+|++.+ ++++|||+.||++|++.+ |+||+| |+.++ ..|++++++ -++|+-+|.
T Consensus 246 ~k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 35899999999999999887 999999999999999999 999999 88764 589999974 456766654
No 46
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.86 E-value=8.3e-09 Score=84.33 Aligned_cols=55 Identities=24% Similarity=0.396 Sum_probs=43.8
Q ss_pred EEEEecCcccCCCCCC---CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 75 AVFLNYDGTLSPIVDD---PDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 75 lif~D~DGTLl~~~~~---p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+++||+||||.+.... .....+.+.+.+.|++|+++ .+++|+|||....+...+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH
Confidence 4799999999984311 01136788999999999998 6899999999888888774
No 47
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.77 E-value=1.4e-08 Score=87.50 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=55.4
Q ss_pred EEEEecCcccCCCCCC------CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH---hhh-c-------ccCceEe
Q 018797 75 AVFLNYDGTLSPIVDD------PDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVM---GFV-E-------LCNVYYA 136 (350)
Q Consensus 75 lif~D~DGTLl~~~~~------p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~---~~~-~-------l~~l~~i 136 (350)
+|++|+||||+....- -....+++.+.+++++++++ .+|+++|||+...+. +++ . +|..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 4899999999984200 00147899999999999999 589999999988764 443 2 4556889
Q ss_pred ccCcceEeCCCC
Q 018797 137 GSHGMDILAPPR 148 (350)
Q Consensus 137 ~~nGa~I~~~~~ 148 (350)
++||+.+....+
T Consensus 81 ~~~g~~~~~~~~ 92 (157)
T smart00775 81 LSPDRLFAALHR 92 (157)
T ss_pred EcCCcchhhhhc
Confidence 999998865433
No 48
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.68 E-value=9.8e-08 Score=86.27 Aligned_cols=47 Identities=28% Similarity=0.350 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST 306 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na 306 (350)
+-.|..+++.+++.+|++.+ .++++||+.||.+||+.+ |++|++...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~~ 188 (212)
T COG0560 142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNPK 188 (212)
T ss_pred cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCcC
Confidence 46899999999999999977 999999999999999999 999998543
No 49
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.54 E-value=5.1e-08 Score=84.95 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCCH--H-HHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLNDP--S-EVLTFLLR 328 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~~--~-eV~~~L~~ 328 (350)
.|-..++.+++.++++.+ ++++|||+.||++|++.+ |++++|+|+.++ ..|+|++..+ + .|.++++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 456789999999999876 999999999999999999 999999999874 6899998643 3 35677777
Q ss_pred HHh
Q 018797 329 LSR 331 (350)
Q Consensus 329 l~~ 331 (350)
++.
T Consensus 154 il~ 156 (169)
T TIGR02726 154 ILK 156 (169)
T ss_pred HHH
Confidence 765
No 50
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.35 E-value=2e-07 Score=78.57 Aligned_cols=72 Identities=25% Similarity=0.284 Sum_probs=61.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCC---HHHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLND---PSEVLTFL 326 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~---~~eV~~~L 326 (350)
--+|-.|.+.|++.+++..+ ++.|+||+.||+++|+.+ |+++++.+|.+. ..|.|+++- .-.|.+++
T Consensus 81 ~~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~ 152 (170)
T COG1778 81 ISDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVC 152 (170)
T ss_pred hHhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHH
Confidence 35899999999999999987 999999999999999999 999999999886 579999863 33466666
Q ss_pred HHHHh
Q 018797 327 LRLSR 331 (350)
Q Consensus 327 ~~l~~ 331 (350)
+-++.
T Consensus 153 dlil~ 157 (170)
T COG1778 153 DLILQ 157 (170)
T ss_pred HHHHH
Confidence 65554
No 51
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.34 E-value=8.1e-06 Score=75.56 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=48.7
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcC---CChhhHHhhh---cc--cCceEeccCcceEe
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISG---RSREKVMGFV---EL--CNVYYAGSHGMDIL 144 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SG---R~~~~v~~~~---~l--~~l~~i~~nGa~I~ 144 (350)
+++++|+||||+.. ...++ ...++|++|+++ .+|+++|| |++..+...+ ++ +..-+++++|+.+.
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 47899999999983 33444 789999999998 58999995 8888877765 33 23347777777543
No 52
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.27 E-value=1.4e-06 Score=72.00 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=40.1
Q ss_pred EEEEEecCcccCCCCCCC-CCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 018797 74 IAVFLNYDGTLSPIVDDP-DRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVM 125 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p-~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~ 125 (350)
+++++|+||||+.....+ ....+.+++.++|+++.+. +.|+++|||+...+.
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 489999999998742111 1234678999999999877 689999999987655
No 53
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.26 E-value=1.9e-06 Score=80.68 Aligned_cols=72 Identities=19% Similarity=0.132 Sum_probs=54.8
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCC-CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---cccC-ceEeccCcceEe
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFM-SDEMRAAVREVAKY-FPTAIISGRSREKVMGFV---ELCN-VYYAGSHGMDIL 144 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~i-s~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~l~~-l~~i~~nGa~I~ 144 (350)
....+|+|||||||++... ..++ ++.+.++|.+|+++ .+++|+|++++..+...+ ++.. +..+.++|....
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred ccceEEEEecCCCCcCCCC---ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 4667999999999999421 1224 49999999999999 589999999998887765 4543 236777777765
Q ss_pred C
Q 018797 145 A 145 (350)
Q Consensus 145 ~ 145 (350)
.
T Consensus 201 ~ 201 (301)
T TIGR01684 201 E 201 (301)
T ss_pred C
Confidence 4
No 54
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.24 E-value=4.4e-05 Score=70.99 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCC-----C---CccceEEeCCHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTP-----K---ETKASYSLNDPSEVLT 324 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~-----~---~t~A~y~l~~~~eV~~ 324 (350)
+-...+.+++.+|++.+ .+++|||+. +|+.+=+.+ |+ +|.|..+. . +..++|++++..++.+
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~-----G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDC-----GMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 45577888899998877 999999996 998877777 64 56664432 1 1257889999888877
Q ss_pred HH
Q 018797 325 FL 326 (350)
Q Consensus 325 ~L 326 (350)
+|
T Consensus 253 ~l 254 (257)
T TIGR01458 253 LI 254 (257)
T ss_pred HH
Confidence 64
No 55
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.91 E-value=2.2e-05 Score=73.62 Aligned_cols=71 Identities=15% Similarity=0.032 Sum_probs=54.2
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCC---CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---cccCc-eEeccCcce
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFM---SDEMRAAVREVAKY-FPTAIISGRSREKVMGFV---ELCNV-YYAGSHGMD 142 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~i---s~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~l~~l-~~i~~nGa~ 142 (350)
...+++++|+||||++. ...+ ++.+.++|.+|++. .+++|+|+.++..+...+ ++... ..+.++|..
T Consensus 126 ~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 126 EIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred eeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 56789999999999994 3344 68999999999998 589999988888777765 44432 356677766
Q ss_pred EeCC
Q 018797 143 ILAP 146 (350)
Q Consensus 143 I~~~ 146 (350)
....
T Consensus 201 ~~k~ 204 (303)
T PHA03398 201 AGEY 204 (303)
T ss_pred cccc
Confidence 6554
No 56
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.43 E-value=0.00042 Score=63.65 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=48.3
Q ss_pred hhCCCCCCcHHHHHHHhccCCE-EEEEecCcccCCCCCC--CCCCCCCH---------------------------HHHH
Q 018797 53 MEHPSALGSFDKMMKAAKEKKI-AVFLNYDGTLSPIVDD--PDRVFMSD---------------------------EMRA 102 (350)
Q Consensus 53 ~~~~~al~~f~~~~~~~~~k~~-lif~D~DGTLl~~~~~--p~~~~is~---------------------------~~~~ 102 (350)
.+.|=-..+-++|.+..++++. .|+||+||||++.... -.....++ ...+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~e 121 (237)
T TIGR01672 42 EQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQ 121 (237)
T ss_pred ccCCeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHH
Confidence 4555555677999998987754 9999999999986430 00000111 1778
Q ss_pred HHHHHHhc-CCEEEEcCCC
Q 018797 103 AVREVAKY-FPTAIISGRS 120 (350)
Q Consensus 103 aL~~L~~~-~~v~I~SGR~ 120 (350)
.|+.+.++ .+++|||+|.
T Consensus 122 lL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 122 LIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred HHHHHHHCCCEEEEEeCCC
Confidence 88888888 5899999993
No 57
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.35 E-value=0.00033 Score=58.03 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=40.9
Q ss_pred EEEEEecCcccCCCCCCCCCC-------CCCHHHHHHHHHHHhc-CCEEEEcCC-ChhhHHhhhc
Q 018797 74 IAVFLNYDGTLSPIVDDPDRV-------FMSDEMRAAVREVAKY-FPTAIISGR-SREKVMGFVE 129 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~-------~is~~~~~aL~~L~~~-~~v~I~SGR-~~~~v~~~~~ 129 (350)
+++++|+||||.+........ .+-+.+.+.|+.|.++ .+++|+|++ +...+...+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHH
Confidence 478999999999852110011 2457999999999887 589999999 6666666554
No 58
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.29 E-value=0.00023 Score=58.85 Aligned_cols=56 Identities=29% Similarity=0.395 Sum_probs=41.5
Q ss_pred EEEEEecCcccCCCC--CCC-CCCCCCHHHHHHHHHHHhc-CCEEEEcCCC--------hhhHHhhhc
Q 018797 74 IAVFLNYDGTLSPIV--DDP-DRVFMSDEMRAAVREVAKY-FPTAIISGRS--------REKVMGFVE 129 (350)
Q Consensus 74 ~lif~D~DGTLl~~~--~~p-~~~~is~~~~~aL~~L~~~-~~v~I~SGR~--------~~~v~~~~~ 129 (350)
+++++|+||||++.. .++ ....+.+.++++|+.|++. .+++|+|+++ ...+..++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~ 68 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLE 68 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHH
Confidence 478999999999521 001 1245678899999999988 6999999998 556665553
No 59
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.26 E-value=0.0017 Score=67.01 Aligned_cols=59 Identities=19% Similarity=0.292 Sum_probs=45.4
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhc
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF--PTAIISGRSREKVMGFVE 129 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~ 129 (350)
.....+.+++..||+++....- ...+-+...++|++|++.+ +++|+||.+...+..+++
T Consensus 360 ~~~g~~~~~v~~~~~~~g~i~~--~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 360 ESQGKTVVFVAVDGELLGVIAL--RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred hhCCcEEEEEEECCEEEEEEEe--cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHH
Confidence 3455678888899998875321 2356789999999998864 899999999988777664
No 60
>PRK10444 UMP phosphatase; Provisional
Probab=97.24 E-value=0.00034 Score=64.80 Aligned_cols=49 Identities=10% Similarity=0.133 Sum_probs=40.7
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 128 (350)
+++++|+||||... ..+.+...++|++|++. .+++++|+|+......+.
T Consensus 2 ~~v~~DlDGtL~~~------~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~ 51 (248)
T PRK10444 2 KNVICDIDGVLMHD------NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLA 51 (248)
T ss_pred cEEEEeCCCceEeC------CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Confidence 57999999999983 25678999999999998 589999999987655543
No 61
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.21 E-value=0.00069 Score=58.81 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=35.3
Q ss_pred CCEEEEEecCcccCCCCC------CCCCCC-CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 72 KKIAVFLNYDGTLSPIVD------DPDRVF-MSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~------~p~~~~-is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
+.+++++|+||||+...+ +|++-+ +-+.+.++|++|.+. .+++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 457888999999997421 111111 236789999999887 58999997654
No 62
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.09 E-value=0.00035 Score=62.85 Aligned_cols=58 Identities=31% Similarity=0.433 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC-CccceEEeCCH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK-ETKASYSLNDP 319 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~-~t~A~y~l~~~ 319 (350)
.|+..++.+++.++++.+ ++++|||+.+|++|.+.+ |++|++...+. ...|+|++.+.
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~ 210 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKK 210 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCC
Confidence 489999999999999876 999999999999999999 89998853221 24789998754
No 63
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.09 E-value=0.00052 Score=64.50 Aligned_cols=44 Identities=11% Similarity=0.119 Sum_probs=35.1
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSRE 122 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~ 122 (350)
.+++++|+||||... .. .-+.+.++|++|.+. .+++++|+|+..
T Consensus 2 ~~~~~~D~DGtl~~~-----~~-~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG-----ER-VVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred ccEEEEeCCCceEcC-----Ce-eCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 357999999999982 22 344589999999988 589999998754
No 64
>PLN02645 phosphoglycolate phosphatase
Probab=96.94 E-value=0.00078 Score=64.42 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCC--C--------CccceEEeCCHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTP--K--------ETKASYSLNDPSEV 322 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~--~--------~t~A~y~l~~~~eV 322 (350)
+-..++.+++.++++.+ ++++|||+. +|+.+=+.+ |+ +|.|..+. . .-.++|++++..++
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHc-----CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 34577888889998877 999999997 999887777 64 56664332 1 12478999888887
Q ss_pred HHHHH
Q 018797 323 LTFLL 327 (350)
Q Consensus 323 ~~~L~ 327 (350)
.++++
T Consensus 304 ~~~~~ 308 (311)
T PLN02645 304 LTLKA 308 (311)
T ss_pred HHHhh
Confidence 76654
No 65
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.92 E-value=0.0011 Score=58.50 Aligned_cols=47 Identities=28% Similarity=0.323 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCC
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTP 307 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~ 307 (350)
-.|+.+++.+++.+|++.+ .+++|||+.+|++|++.+ |+++++...+
T Consensus 146 ~~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~~~ 192 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGDEG 192 (201)
T ss_pred ccHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECCCc
Confidence 3799999999999999876 999999999999999999 9999986533
No 66
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.79 E-value=0.003 Score=56.74 Aligned_cols=67 Identities=22% Similarity=0.274 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCCHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTP--K----ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~--~----~t~A~y~l~~~~eV~~~L 326 (350)
.|..+++.+++.++++.+ .+++|||+.+|+.+.+.+ |+ +|.|..+. . ...++|++++..++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 457889999999999876 999999999999999998 65 56665432 1 136889999999998887
Q ss_pred HH
Q 018797 327 LR 328 (350)
Q Consensus 327 ~~ 328 (350)
.+
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 67
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.70 E-value=0.0012 Score=57.67 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE--EEEcCCCC--C---ccceEEeCCHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP--IIVSSTPK--E---TKASYSLNDPSEVL 323 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~--Vav~na~~--~---t~A~y~l~~~~eV~ 323 (350)
+-..+...++++|++.+ ++++|||+.+|+.+=+.+ |+. |.|.-+.. . ..|++++.++.++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 35667888899999877 999999999999887777 763 45543321 1 24899998887764
No 68
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.65 E-value=0.0011 Score=57.14 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=36.1
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 248 RPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 248 ~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.+. +.+|+.+++.+++.++++.+ .+++|||+.||++|++.+
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhcC
Confidence 455 78999999999999998766 899999999999999864
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.65 E-value=0.0023 Score=56.68 Aligned_cols=46 Identities=26% Similarity=0.281 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS 305 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n 305 (350)
+-.|..+++.+++..+++.+ .++++||+.+|++|++.+ |.+++|..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence 56789999999999998866 999999999999999999 88888764
No 70
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.65 E-value=0.0045 Score=56.91 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=28.2
Q ss_pred hhCCCCCCcHHHHHHHhccC-CEEEEEecCcccCC
Q 018797 53 MEHPSALGSFDKMMKAAKEK-KIAVFLNYDGTLSP 86 (350)
Q Consensus 53 ~~~~~al~~f~~~~~~~~~k-~~lif~D~DGTLl~ 86 (350)
.+.|=-..+.++|.+...++ ...|.+|+|||++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 42 EQAPVHWVSVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred ccCCeeEEEHHHhhhhccCCCCcEEEEECcCcccc
Confidence 45666667889999888887 55999999999996
No 71
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.58 E-value=0.0073 Score=62.48 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--CHHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--DPSEVLTFLL 327 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~~~eV~~~L~ 327 (350)
+|...++.+.+ ..+ .++++||+.||.+|++.+ |.||+|+++.+. ..|++++. +.+++..+++
T Consensus 454 ~K~~~v~~l~~----~~~---~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 454 DKAALIKELQE----KGR---VVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred HHHHHHHHHHH----cCC---EEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 78888777765 223 899999999999999999 899999986543 47899984 6666666553
No 72
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.57 E-value=0.0029 Score=68.49 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=52.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEe--CCHH
Q 018797 245 MEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSL--NDPS 320 (350)
Q Consensus 245 lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l--~~~~ 320 (350)
-++.|. +|..+++.+.+ ..+ .++++||+.||.+|++.+ |.||+|+++.+. ..|++++ ++.+
T Consensus 694 ~~~~p~---~K~~~i~~l~~----~~~---~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~ 758 (834)
T PRK10671 694 AGVLPD---GKAEAIKRLQS----QGR---QVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLM 758 (834)
T ss_pred eCCCHH---HHHHHHHHHhh----cCC---EEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 344554 58887777653 233 899999999999999999 999999998764 4677776 4677
Q ss_pred HHHHHHH
Q 018797 321 EVLTFLL 327 (350)
Q Consensus 321 eV~~~L~ 327 (350)
++..+++
T Consensus 759 ~i~~~i~ 765 (834)
T PRK10671 759 GVADALA 765 (834)
T ss_pred HHHHHHH
Confidence 8888775
No 73
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.56 E-value=0.0032 Score=53.53 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=41.0
Q ss_pred cCCEEEEEecCcccCCCC----CCC-CCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 71 EKKIAVFLNYDGTLSPIV----DDP-DRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~----~~p-~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.+.+++++|+||||++-. ++- +-+...-.-=..|+.|.+. +.++|+|||.-.-++...+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 467999999999999721 110 1111222234578888888 6999999999998887653
No 74
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.46 E-value=0.0037 Score=68.33 Aligned_cols=61 Identities=21% Similarity=0.261 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCC--HHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLND--PSEVLTFL 326 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~--~~eV~~~L 326 (350)
+|...++.+- ..| + .+.++||+.||.+||+.+ +.||+|+++.+. ..|+|++.+ ...+.+.+
T Consensus 618 ~K~~iV~~lq-~~g---~---~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 618 HKSELVELLQ-EQG---E---IVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHH-hcC---C---eEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 6766666443 222 2 677899999999999999 899999987553 479999976 45555444
No 75
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.46 E-value=0.0034 Score=56.32 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC-CccceE--EeCCHHHHHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK-ETKASY--SLNDPSEVLTFLLR 328 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~-~t~A~y--~l~~~~eV~~~L~~ 328 (350)
+..|...++.+ +..+. .++++||+.||++|++.+ |++|++.-.+. ...|+- ++.+.+++.+.|..
T Consensus 130 ~~~K~~~l~~l-~~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAF-KSLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHH-HhhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 45899988887 44542 799999999999999999 99999864332 123332 34677887776664
Q ss_pred H
Q 018797 329 L 329 (350)
Q Consensus 329 l 329 (350)
-
T Consensus 198 ~ 198 (203)
T TIGR02137 198 A 198 (203)
T ss_pred H
Confidence 4
No 76
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.44 E-value=0.0032 Score=55.84 Aligned_cols=51 Identities=14% Similarity=0.178 Sum_probs=39.5
Q ss_pred ceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceE-EeCCHHHHHHHHHHHH
Q 018797 275 LPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASY-SLNDPSEVLTFLLRLS 330 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y-~l~~~~eV~~~L~~l~ 330 (350)
.+++|||+.||+.|.+.+ |.||+++.... ...+.+ ++.++.++.++|.+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 899999999999999999 77887654321 124455 7889999988887764
No 77
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.37 E-value=0.0015 Score=69.61 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=49.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--CH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--DP 319 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~~ 319 (350)
+.++.|. +|...++.+.+ .. .++++||+.||.+||+.+ +.||+|+++.+. ..|++++. +.
T Consensus 610 ~~~~~p~---~K~~~v~~l~~-----~~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 610 RAGLLPE---DKVKAVTELNQ-----HA---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred ecCCCHH---HHHHHHHHHhc-----CC---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCH
Confidence 3445564 79998887653 12 799999999999999999 899999987653 46888874 45
Q ss_pred HHHHHHH
Q 018797 320 SEVLTFL 326 (350)
Q Consensus 320 ~eV~~~L 326 (350)
.++..++
T Consensus 674 ~~l~~~i 680 (741)
T PRK11033 674 RGLAQMI 680 (741)
T ss_pred HHHHHHH
Confidence 5555443
No 78
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.34 E-value=0.0046 Score=50.99 Aligned_cols=61 Identities=18% Similarity=0.239 Sum_probs=45.1
Q ss_pred HHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEE-cC--CCCC--ccceEEeCCHHHHHHHHHHH
Q 018797 261 YLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIV-SS--TPKE--TKASYSLNDPSEVLTFLLRL 329 (350)
Q Consensus 261 ~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav-~n--a~~~--t~A~y~l~~~~eV~~~L~~l 329 (350)
.+++.|+-+.+ .++++||+.||+.||+.+ ..||++ ++ ++.. ..|++++.+..++.+.+...
T Consensus 84 ~ii~eLkk~~~---k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 84 KIIRELKKRYE---KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred HHHHHhcCCCc---EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 34444544544 999999999999999999 688764 33 3333 48999999998888877654
No 79
>PLN02954 phosphoserine phosphatase
Probab=96.31 E-value=0.0092 Score=53.71 Aligned_cols=67 Identities=24% Similarity=0.266 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCC-C---CccceEEeCCHHHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTP-K---ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~-~---~t~A~y~l~~~~eV~~~L 326 (350)
+-.|..+++.+++.+|.. .+++|||+.||+.|.+.+ +..+.++.+... . ...|+|++.+..++.++|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPG---GADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcC---CCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 457999999999999864 899999999999995554 112334333221 1 135899999988887654
No 80
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.30 E-value=0.0062 Score=62.63 Aligned_cols=62 Identities=21% Similarity=0.181 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc-CCCCC--ccceEEe--CCHHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS-STPKE--TKASYSL--NDPSEVLTFLL 327 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~-na~~~--t~A~y~l--~~~~eV~~~L~ 327 (350)
+|...++.+.+.. + .++++||+.||.+|++.+ |.||+|+ ++.+. ..|++++ ++..++.++++
T Consensus 413 ~K~~~i~~l~~~~----~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 413 DKLEIVKELREKY----G---PVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred HHHHHHHHHHhcC----C---EEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 7877777765433 3 899999999999999999 8999999 55443 4789998 67777776554
No 81
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.26 E-value=0.005 Score=64.67 Aligned_cols=69 Identities=19% Similarity=0.207 Sum_probs=53.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--CH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--DP 319 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~~ 319 (350)
+-++.|. +|...++.+.+.- . .++++||+.||.++|+.+ +.||+|+++.+. ..|++++- ++
T Consensus 489 ~a~~~Pe---dK~~~v~~lq~~g----~---~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~ 553 (675)
T TIGR01497 489 IAEATPE---DKIALIRQEQAEG----K---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDP 553 (675)
T ss_pred EcCCCHH---HHHHHHHHHHHcC----C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCH
Confidence 3455565 8999999886542 2 799999999999999999 899999987653 57899874 45
Q ss_pred HHHHHHHH
Q 018797 320 SEVLTFLL 327 (350)
Q Consensus 320 ~eV~~~L~ 327 (350)
..+.+.++
T Consensus 554 s~Iv~av~ 561 (675)
T TIGR01497 554 TKLIEVVH 561 (675)
T ss_pred HHHHHHHH
Confidence 66655553
No 82
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.25 E-value=0.012 Score=51.16 Aligned_cols=54 Identities=19% Similarity=0.114 Sum_probs=42.6
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCC-hhhHHhhh
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRS-REKVMGFV 128 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~-~~~v~~~~ 128 (350)
...+++++|+||||+.. +...+.+.+.++|+.|.+. .+++|+|+.+ ...+..++
T Consensus 23 ~~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred CCCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH
Confidence 56788999999999984 2336778999999999988 6899999998 44444443
No 83
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.20 E-value=0.0067 Score=51.27 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=35.4
Q ss_pred EEEEecCcccCCCCCC-----CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 75 AVFLNYDGTLSPIVDD-----PDRVFMSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 75 lif~D~DGTLl~~~~~-----p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
+++||+||||.+.... ++...+-+.+.++|+.|.++ .+++|+|..+.
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 6899999999985320 01123467889999999988 58999998763
No 84
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.18 E-value=0.013 Score=55.43 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=46.2
Q ss_pred cCCEEEEEecCcccCCCCCC----CC---CCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 71 EKKIAVFLNYDGTLSPIVDD----PD---RVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~----p~---~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
++..++++|+||||...... +. +..+.+.+.++|++|.+. .+++|+|||+.......+.
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 34678999999999985431 11 245678999999999988 5899999999987776654
No 85
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.14 E-value=0.013 Score=54.86 Aligned_cols=68 Identities=21% Similarity=0.185 Sum_probs=48.2
Q ss_pred CCCCcHHHHHHHhccCCEEEEEecCcccCCCC--------CC-C------------CCCCCCHHHHHHHHHHHhc-CCEE
Q 018797 57 SALGSFDKMMKAAKEKKIAVFLNYDGTLSPIV--------DD-P------------DRVFMSDEMRAAVREVAKY-FPTA 114 (350)
Q Consensus 57 ~al~~f~~~~~~~~~k~~lif~D~DGTLl~~~--------~~-p------------~~~~is~~~~~aL~~L~~~-~~v~ 114 (350)
.|-..|++..+..++++.+|++|+|+|++... .. | ....+-+.+.+.|+.|.+. .+++
T Consensus 59 ~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~ 138 (266)
T TIGR01533 59 LAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIF 138 (266)
T ss_pred HHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEE
Confidence 34456666665556888999999999998633 11 1 0123446778999999888 5899
Q ss_pred EEcCCChhhH
Q 018797 115 IISGRSREKV 124 (350)
Q Consensus 115 I~SGR~~~~v 124 (350)
|+|+|+....
T Consensus 139 iVTnR~~~~~ 148 (266)
T TIGR01533 139 YVSNRSEKEK 148 (266)
T ss_pred EEeCCCcchH
Confidence 9999985543
No 86
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.10 E-value=0.0036 Score=53.99 Aligned_cols=44 Identities=32% Similarity=0.471 Sum_probs=30.8
Q ss_pred EEEEEecCcccCCCC------CCCCC-CCCCHHHHHHHHHHHhcC-CEEEEc
Q 018797 74 IAVFLNYDGTLSPIV------DDPDR-VFMSDEMRAAVREVAKYF-PTAIIS 117 (350)
Q Consensus 74 ~lif~D~DGTLl~~~------~~p~~-~~is~~~~~aL~~L~~~~-~v~I~S 117 (350)
+++|+|+||||.... .+|++ ..+.+.+.++|++|.+.+ .++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 378999999999642 23444 235567999999998885 788887
No 87
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.10 E-value=0.0095 Score=50.52 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=43.6
Q ss_pred CCEEEEEecCcccCCCCC--CCCCC-------------------CCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 72 KKIAVFLNYDGTLSPIVD--DPDRV-------------------FMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~--~p~~~-------------------~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
++.++++|+||||+.... .++.. .+-|.+.+.|..|.+..+++|+|+.+...+...++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 477899999999998531 11100 22467889999998668999999999998887764
No 88
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.07 E-value=0.015 Score=54.53 Aligned_cols=70 Identities=26% Similarity=0.443 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCC--CC----CccceEEeCCHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSST--PK----ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na--~~----~t~A~y~l~~~~eV~~~L 326 (350)
.|..++..++++++++.+ ++++|||+.+|+.+-+.+ |+ +|.+..+ .. ...|+|++.++.++..++
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~A-----G~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQV-----GLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 567889999999999876 999999999999888887 54 4445443 22 236899999999999998
Q ss_pred HHHHh
Q 018797 327 LRLSR 331 (350)
Q Consensus 327 ~~l~~ 331 (350)
.+|+.
T Consensus 268 ~~~~~ 272 (273)
T PRK13225 268 TQLMR 272 (273)
T ss_pred HHHhc
Confidence 88763
No 89
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.06 E-value=0.0098 Score=55.72 Aligned_cols=68 Identities=22% Similarity=0.279 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCCHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTP--K----ETKASYSLNDPSEVLT 324 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~--~----~t~A~y~l~~~~eV~~ 324 (350)
+-.+..+++.+++.+|++.+ .+++|||+.+|+.|-+.+ |+ .+.|..+. . ...++++++++.++..
T Consensus 156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 45677899999999999877 999999999999999988 75 45555432 1 2468999999988876
Q ss_pred HHH
Q 018797 325 FLL 327 (350)
Q Consensus 325 ~L~ 327 (350)
++.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 554
No 90
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.04 E-value=0.045 Score=60.86 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=46.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC---CccceEEeCC
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK---ETKASYSLND 318 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~---~t~A~y~l~~ 318 (350)
+-.+.|. .|+.-|+.+.+..| . .+.++||+.||.+|++.+ ..||.+..... ...|+|++.+
T Consensus 748 ~aR~sP~---qK~~IV~~lk~~~~---~---~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 748 CCRVSPS---QKADVVRLVKKSTG---K---TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred EeCCCHH---HHHHHHHHHHhcCC---C---eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhh
Confidence 3456676 99999988876544 2 799999999999999999 68887644321 2478999876
No 91
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.01 E-value=0.014 Score=51.93 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE-EEEcCC--CC----CccceEEeCCHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP-IIVSST--PK----ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~-Vav~na--~~----~t~A~y~l~~~~eV~~~L 326 (350)
-|...++.+++.+|++.+ .+++|||+.+|+.+-+.+ |.. |.+.-+ .. +..|+|+++++.++..+|
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 456888999999999877 999999999999988888 654 334322 21 246899999999998776
Q ss_pred H
Q 018797 327 L 327 (350)
Q Consensus 327 ~ 327 (350)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 5
No 92
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.95 E-value=0.0088 Score=54.81 Aligned_cols=47 Identities=17% Similarity=0.170 Sum_probs=37.0
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEc---CCChhhHHhhh
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIIS---GRSREKVMGFV 128 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~S---GR~~~~v~~~~ 128 (350)
++||+||||... .. +-+...++|+.+.++ .++.++| ||+...+.+.+
T Consensus 1 ~lfD~DGvL~~~-----~~-~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLG-----HK-PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcC-----Cc-cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 478999999983 22 344889999999988 6899998 89998765543
No 93
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.89 E-value=0.027 Score=48.48 Aligned_cols=56 Identities=23% Similarity=0.267 Sum_probs=48.1
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+-..+-+++|+|.||++.. ....+|+.++=+.++... ..++|+|-.+...|..++.
T Consensus 25 ~~Gikgvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWD----NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HcCCcEEEEeccCceeccc----CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 4577889999999999973 456789999999999999 5899999998888888775
No 94
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.88 E-value=0.03 Score=50.55 Aligned_cols=46 Identities=24% Similarity=0.411 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEE
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPII 302 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Va 302 (350)
|--|.+-++-+++.-+++- .++++|||.+|.+||+.++.+| |..|+
T Consensus 189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAva 234 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVA 234 (315)
T ss_pred CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEE
Confidence 4456677777777777653 5899999999999999998764 45555
No 95
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.87 E-value=0.0069 Score=48.05 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=31.9
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREK 123 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 123 (350)
+++|+||||... ..+-|...++|++|++. .+++++|-.+...
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s 43 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRERGKPVVFLTNNSSRS 43 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 689999999982 34456789999999998 5899998776544
No 96
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=95.80 E-value=0.015 Score=51.82 Aligned_cols=64 Identities=19% Similarity=0.308 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE-EEEcC--CCC----CccceEEeCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP-IIVSS--TPK----ETKASYSLNDPSEVLTF 325 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~-Vav~n--a~~----~t~A~y~l~~~~eV~~~ 325 (350)
-+..++..+++.+|++++ ++++|||+.+|+.+-+.+ |+. |.+.- ... ...|+|++.++.++..+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 142 PHPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 346789999999999877 899999999999999998 754 33422 111 24689999998887654
No 97
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.80 E-value=0.033 Score=48.42 Aligned_cols=47 Identities=26% Similarity=0.268 Sum_probs=40.5
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CC--EEEEcCC
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FP--TAIISGR 119 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~--v~I~SGR 119 (350)
.+...+.+++|.|.||++ |....++++..+.++++.+. +. ++|+|-.
T Consensus 37 k~~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred hhcCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 357889999999999998 45678999999999999988 43 9999976
No 98
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.76 E-value=0.15 Score=57.11 Aligned_cols=70 Identities=16% Similarity=0.297 Sum_probs=48.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCC--CC-ccceEEeCCHHH
Q 018797 245 MEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTP--KE-TKASYSLNDPSE 321 (350)
Q Consensus 245 lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~--~~-t~A~y~l~~~~e 321 (350)
--+.|. .|+.-|+.+.+..+ . .++++||+.||.+|++.+ ..||.++... .. -.|||++..
T Consensus 852 cR~sP~---QKa~IV~~vk~~~~---~---vtlaIGDGaNDv~mIq~A-----dVGIGIsG~EG~qA~~aSDfaI~~--- 914 (1178)
T PLN03190 852 CRVAPL---QKAGIVALVKNRTS---D---MTLAIGDGANDVSMIQMA-----DVGVGISGQEGRQAVMASDFAMGQ--- 914 (1178)
T ss_pred ecCCHH---HHHHHHHHHHhcCC---c---EEEEECCCcchHHHHHhc-----CeeeeecCchhHHHHHhhccchhh---
Confidence 345676 89888887765432 2 789999999999999999 5677543221 11 378888865
Q ss_pred HHHHHHHHHhc
Q 018797 322 VLTFLLRLSRW 332 (350)
Q Consensus 322 V~~~L~~l~~~ 332 (350)
.++|++|+=+
T Consensus 915 -Fr~L~rLLlv 924 (1178)
T PLN03190 915 -FRFLVPLLLV 924 (1178)
T ss_pred -hHHHHHHHHH
Confidence 3566666643
No 99
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.73 E-value=0.019 Score=51.39 Aligned_cols=68 Identities=24% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCCHHHHHHH
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTP--K----ETKASYSLNDPSEVLTF 325 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~--~----~t~A~y~l~~~~eV~~~ 325 (350)
--|...+++++++++++.+ .+++|||+.+|+.+-+.+ |. .|.+..+. + +..|+|++++..++.++
T Consensus 138 Kp~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 138 KPDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CCCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 3567899999999999876 999999999999998888 65 34454332 1 13589999999998887
Q ss_pred HHH
Q 018797 326 LLR 328 (350)
Q Consensus 326 L~~ 328 (350)
+.+
T Consensus 210 i~~ 212 (214)
T PRK13288 210 VGD 212 (214)
T ss_pred Hhh
Confidence 754
No 100
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=95.71 E-value=0.9 Score=44.24 Aligned_cols=199 Identities=15% Similarity=0.121 Sum_probs=97.0
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh----cc-------cCceEecc
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFV----EL-------CNVYYAGS 138 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~----~l-------~~l~~i~~ 138 (350)
++-+|+-||=|+||.....+ -..+..+..-|-+|-+. ..|+|+|.=.|....++. |+ +.+.-.--
T Consensus 145 ~~L~LvTFDgDvTLY~DG~s---l~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk 221 (408)
T PF06437_consen 145 YGLKLVTFDGDVTLYEDGAS---LEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQK 221 (408)
T ss_pred CCceEEEEcCCcccccCCCC---CCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHh
Confidence 37799999999999984322 11245566666666655 799999998887644432 11 12212222
Q ss_pred CcceEeCCCCCcccccCcc--ccccCCCCCCceeecccccch-hHHHHHHHH----HHHHHhh--ccCceeeeccceEEE
Q 018797 139 HGMDILAPPRPVKACEGKY--HTLVPGKKGNEVLFQPAKKFL-PAIQEIIKE----LEEETKK--IQGARIEDNRFCISV 209 (350)
Q Consensus 139 nGa~I~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~~----l~~~~~~--~~g~~ve~~~~~~~~ 209 (350)
+...|++...+......+. ..+..-...+|.+..+ ..|. ..+.++.+. +....++ .| +.|-.|...+.+
T Consensus 222 ~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m-~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp-a~IiRK~RAVGi 299 (408)
T PF06437_consen 222 SNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEM-KTWSEEDITELLDIAEAALRDCVKRLNLP-ATIIRKERAVGI 299 (408)
T ss_pred cCEEEecccceeEEEecCCCCCCeEEccHHhccCccc-cCcCHHHHHHHHHHHHHHHHHHHHHcCCC-eeEEeecceeeE
Confidence 2333333322211000000 0000000112322111 1121 123333333 2222222 23 444445555544
Q ss_pred EEecC---ChhhHHHHHHHHHHHHhhCC-C----cEEecC--CeEEEEEcCCCCCHHHHHHHHHHHc----CCCCCCCcc
Q 018797 210 HFRQV---REEDYSILQEKAKAVLRNYP-D----FDLSEG--KKVMEIRPSIEWDKGHALEYLLDTL----GLSNPNDVL 275 (350)
Q Consensus 210 ~~r~~---~~~~~~~~~~~l~~~l~~~~-~----l~v~~g--~~~lEI~p~~~~~KG~Al~~Ll~~l----gi~~~~~~~ 275 (350)
-...- ..+..+++.=.++..++..+ + +....| .-|+|| | ||.-||+-+.+.+ ++..+ +
T Consensus 300 vP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----G-dKs~GV~~lQ~y~~~~~~i~~~---~ 371 (408)
T PF06437_consen 300 VPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----G-DKSLGVRALQKYFDPEGGIKPS---E 371 (408)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----C-CcHHhHHHHHHHHHhccCCCcc---c
Confidence 32110 11223343334455555542 1 344444 345665 3 8999999999999 89888 9
Q ss_pred eEEEeCC
Q 018797 276 PLYIGDD 282 (350)
Q Consensus 276 vi~~GD~ 282 (350)
++.+||-
T Consensus 372 tLHVGDQ 378 (408)
T PF06437_consen 372 TLHVGDQ 378 (408)
T ss_pred eeeehhh
Confidence 9999994
No 101
>PRK06769 hypothetical protein; Validated
Probab=95.69 E-value=0.0091 Score=52.03 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC------------CccceEEeCCHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK------------ETKASYSLNDPSEV 322 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~------------~t~A~y~l~~~~eV 322 (350)
-.....++++++++.+ ++++|||+.+|+.+=+.+ |+ +|.+..+.. +..++|++.++.++
T Consensus 96 p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 96 TGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKV-----NATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 4566778888898776 999999999998877777 64 455554321 12477888888777
Q ss_pred HHHH
Q 018797 323 LTFL 326 (350)
Q Consensus 323 ~~~L 326 (350)
..+|
T Consensus 168 ~~~l 171 (173)
T PRK06769 168 VNWI 171 (173)
T ss_pred HHHH
Confidence 6654
No 102
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.69 E-value=0.018 Score=58.88 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=39.3
Q ss_pred ccCCEEEEEecCcccCCCCC------CCCCCC-CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 70 KEKKIAVFLNYDGTLSPIVD------DPDRVF-MSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~------~p~~~~-is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
+++.+++|||+||||..... +|++-. +-+.+.++|++|.+. ..++|+|..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 47789999999999996321 222222 467889999999998 58999998655
No 103
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.66 E-value=0.019 Score=52.14 Aligned_cols=64 Identities=19% Similarity=0.216 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE-EEEcCCC---C----CccceEEeCCHHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP-IIVSSTP---K----ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~-Vav~na~---~----~t~A~y~l~~~~eV~~~L 326 (350)
+...+..+++.+|++++ ++++|||+.+|+.+-+.+ |+. |++.-+. . ...|+|++.++.++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45678999999999877 999999999999999888 653 4443221 1 135899999998876554
No 104
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.64 E-value=0.0087 Score=52.33 Aligned_cols=64 Identities=20% Similarity=0.261 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC-----Cccc--eEEeCCHHHHHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK-----ETKA--SYSLNDPSEVLTFLL 327 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~-----~t~A--~y~l~~~~eV~~~L~ 327 (350)
-..+..+++.+|++.+ ++++|||+.+|+.+-+.+ |+ .|.+..+.. +..+ ++++.+..++.++|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4567788889999877 999999999999888887 64 344543321 1245 788888888777664
No 105
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.56 E-value=0.018 Score=60.84 Aligned_cols=70 Identities=23% Similarity=0.180 Sum_probs=56.1
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEe--CC
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSL--ND 318 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l--~~ 318 (350)
.+-|+.|. +|-..++.|.+.- . .++.+||+.||-++|..+ ..||+|+.+.+- ..|+.++ +|
T Consensus 579 v~AellPe---dK~~~V~~l~~~g----~---~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~d 643 (713)
T COG2217 579 VRAELLPE---DKAEIVRELQAEG----R---KVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDD 643 (713)
T ss_pred heccCCcH---HHHHHHHHHHhcC----C---EEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCC
Confidence 35678887 8999998887543 2 899999999999999999 799999997663 5788886 35
Q ss_pred HHHHHHHHH
Q 018797 319 PSEVLTFLL 327 (350)
Q Consensus 319 ~~eV~~~L~ 327 (350)
...|.++++
T Consensus 644 L~~v~~ai~ 652 (713)
T COG2217 644 LSAVPEAID 652 (713)
T ss_pred HHHHHHHHH
Confidence 677766664
No 106
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.55 E-value=0.0099 Score=51.31 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
|-..++.+++.++++.+ ++++|||+.+|+.+-+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 45677888899998876 999999999999988877
No 107
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.50 E-value=0.017 Score=50.38 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=44.2
Q ss_pred CCEEEEEecCcccCCC---CCC--CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 72 KKIAVFLNYDGTLSPI---VDD--PDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 72 k~~lif~D~DGTLl~~---~~~--p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
..++++||+||||++- .+. .+-...+.+--.+|+.|++. .+++|+|+++...+...++
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~ 69 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAE 69 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHH
Confidence 3689999999999983 111 01123456677899999988 5999999999998888775
No 108
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.46 E-value=0.012 Score=60.59 Aligned_cols=65 Identities=22% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC-ccceEEeCCHHHHHHHH
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE-TKASYSLNDPSEVLTFL 326 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~-t~A~y~l~~~~eV~~~L 326 (350)
.-|+..++.|.++-|. .+.||||+.||..|++.++- |.||.=..+... .+|+|++..-..|.+.|
T Consensus 767 tQKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~~---GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAADV---GIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred hHHHHHHHHHHHhhCc------eEEEEcCCCccchheeeccc---ceeeecccccccchhccccHHHHHHHHHHh
Confidence 4799888888887772 79999999999999999953 777754444433 48999987554444433
No 109
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.45 E-value=0.02 Score=55.74 Aligned_cols=48 Identities=19% Similarity=0.334 Sum_probs=38.9
Q ss_pred CCEEEEEecCcccCCCC------CCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCC
Q 018797 72 KKIAVFLNYDGTLSPIV------DDPDRVFMSDEMRAAVREVAKY-FPTAIISGR 119 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~------~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR 119 (350)
+++++|+|.||||.... ..+++..+-|.+.++|.+|.+. .+++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 57899999999999842 2234566778899999999887 689999984
No 110
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=95.43 E-value=0.033 Score=50.34 Aligned_cols=68 Identities=24% Similarity=0.280 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC----CccceEEeCCHHHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK----ETKASYSLNDPSEVLTFLL 327 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~----~t~A~y~l~~~~eV~~~L~ 327 (350)
.-..+..+++.+|++++ .+++|||+.+|+.|=+.+.- ...+|..+.... ...|++++.++.++...|.
T Consensus 147 ~P~~l~~~~~~~~~~~~---~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPE---EALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChh---heEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 45778899999999854 99999999999999999820 013444443211 2469999999999887775
No 111
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.27 E-value=0.026 Score=51.77 Aligned_cols=47 Identities=11% Similarity=0.056 Sum_probs=37.5
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREK 123 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 123 (350)
.+..++++|+||||... ..+-+.+.++|++|.+. .+++|+|..++..
T Consensus 6 ~~~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred hcCCEEEEecccccccC------CccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 34567999999999973 34568899999999988 5899988876653
No 112
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.22 E-value=0.047 Score=40.54 Aligned_cols=56 Identities=32% Similarity=0.429 Sum_probs=43.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCC-CCCHHHHHHHHhCCCce-EEEEcCCCC--C------ccceEEeCCHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDD-RTDEDAFKVIKGRGQGY-PIIVSSTPK--E------TKASYSLNDPS 320 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~-~ND~~Mf~~~~~~~~g~-~Vav~na~~--~------t~A~y~l~~~~ 320 (350)
..++.+++.++++.+ .+++|||+ .+|+.+=+.+ |+ +|.|..+.. + ..++|++.+..
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~-----G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAA-----GIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHT-----TSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHc-----CCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 456788889999877 99999999 9999988888 54 677766532 1 36788887754
No 113
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.06 E-value=0.029 Score=50.54 Aligned_cols=68 Identities=21% Similarity=0.065 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC----CCCccceEEeCCHHHHHHHHHH
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST----PKETKASYSLNDPSEVLTFLLR 328 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na----~~~t~A~y~l~~~~eV~~~L~~ 328 (350)
..|..+++. ++.... .+++|||+.||+.|.+.+ |..++-+.- .....+.+...+-.+|.+.|+.
T Consensus 147 ~~K~~~l~~----~~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~ 214 (219)
T PRK09552 147 CCKPSLIRK----LSDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELKH 214 (219)
T ss_pred CchHHHHHH----hccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHHH
Confidence 457766554 555554 899999999999999888 775552110 0123466667888999999988
Q ss_pred HHhc
Q 018797 329 LSRW 332 (350)
Q Consensus 329 l~~~ 332 (350)
+.+.
T Consensus 215 ~~~~ 218 (219)
T PRK09552 215 LLEV 218 (219)
T ss_pred Hhcc
Confidence 7653
No 114
>PLN02954 phosphoserine phosphatase
Probab=95.04 E-value=0.04 Score=49.54 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 97 SDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 97 s~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
-+.+.+.|+.|++. .+++|+||.....+..++.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~ 119 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAA 119 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 35667777888777 5799999999888777653
No 115
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.01 E-value=0.039 Score=50.36 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=40.9
Q ss_pred cCCEEEEEecCcccCCCCC------------C---------CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 018797 71 EKKIAVFLNYDGTLSPIVD------------D---------PDRVFMSDEMRAAVREVAKY-FPTAIISGRSREK 123 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~------------~---------p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 123 (350)
.++-+++||+|.|++.... + ...+..-+.++++++.|.++ +.|+++|||+...
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 5788999999999997320 0 11344567899999999998 5899999998754
No 116
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.91 E-value=0.039 Score=47.36 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=37.4
Q ss_pred EEEEecCcccCCCC------CCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCCChhhHH
Q 018797 75 AVFLNYDGTLSPIV------DDPDRVFMSDEMRAAVREVAKYF-PTAIISGRSREKVM 125 (350)
Q Consensus 75 lif~D~DGTLl~~~------~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~ 125 (350)
+|++|+||||+... .--....+.+...+.++++++++ .++-+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 48999999999841 00011145677888999999995 89999999985433
No 117
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.84 E-value=0.046 Score=48.95 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 018797 97 SDEMRAAVREVAKY-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 97 s~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 128 (350)
.+.+.+.|+.|++. .+++|+||.....+..++
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l 119 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK 119 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 34566677777766 478888887776666554
No 118
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.83 E-value=0.038 Score=48.91 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 98 DEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 98 ~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
+.+.+.|+.|.+..+++|+|+.....+..++.
T Consensus 71 pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~ 102 (205)
T PRK13582 71 PGAVEFLDWLRERFQVVILSDTFYEFAGPLMR 102 (205)
T ss_pred CCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHH
Confidence 44567788887667899999999988887653
No 119
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.77 E-value=0.038 Score=50.65 Aligned_cols=80 Identities=34% Similarity=0.516 Sum_probs=51.2
Q ss_pred EEcCCCCCHHHHHHHHHHHc---CCCCCCCcceEEEeCCCCCHHHHHHHHhC-----CCceEEE--EcCCCCCccceEEe
Q 018797 247 IRPSIEWDKGHALEYLLDTL---GLSNPNDVLPLYIGDDRTDEDAFKVIKGR-----GQGYPII--VSSTPKETKASYSL 316 (350)
Q Consensus 247 I~p~~~~~KG~Al~~Ll~~l---gi~~~~~~~vi~~GD~~ND~~Mf~~~~~~-----~~g~~Va--v~na~~~t~A~y~l 316 (350)
..|. +.-||..++.+++.. |.+.+ .++|+||+.||.=....++.. ..||+.. +...+....|.-+.
T Consensus 144 ~C~~-NmCK~~il~~~~~~~~~~g~~~~---rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~ 219 (234)
T PF06888_consen 144 LCPP-NMCKGKILERLLQEQAQRGVPYD---RVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVP 219 (234)
T ss_pred cCCC-ccchHHHHHHHHHHHhhcCCCcc---eEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEe
Confidence 4466 889999999999874 55444 999999999998766555432 1133321 11111123555443
Q ss_pred -CCHHHHHHHHHHHH
Q 018797 317 -NDPSEVLTFLLRLS 330 (350)
Q Consensus 317 -~~~~eV~~~L~~l~ 330 (350)
.+..++.+.|..|+
T Consensus 220 W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 220 WSSGEEILEILLQLI 234 (234)
T ss_pred cCCHHHHHHHHHhhC
Confidence 57778888887663
No 120
>PTZ00445 p36-lilke protein; Provisional
Probab=94.75 E-value=0.078 Score=47.62 Aligned_cols=65 Identities=14% Similarity=0.219 Sum_probs=45.4
Q ss_pred CCCCcHHHHHHHh-ccCCEEEEEecCcccCC-----CCCCCC------CCCCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 018797 57 SALGSFDKMMKAA-KEKKIAVFLNYDGTLSP-----IVDDPD------RVFMSDEMRAAVREVAKY-FPTAIISGRSRE 122 (350)
Q Consensus 57 ~al~~f~~~~~~~-~~k~~lif~D~DGTLl~-----~~~~p~------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~ 122 (350)
+...+-+.+...+ +.+.++|++|+|-||+. .. +|. -..++++.+..+.+|.+. ++|+|+|=.+..
T Consensus 26 ~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~-~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 26 NPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYI-DPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhccccc-CCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 3333434444444 47899999999999998 21 121 123789999999999887 799999966543
No 121
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=94.75 E-value=0.041 Score=58.00 Aligned_cols=69 Identities=17% Similarity=0.233 Sum_probs=53.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--CH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLN--DP 319 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~--~~ 319 (350)
+-++.|. +|-.-|+.+.+. | + .+..+||+.||-++|+.+ ..||+|+++.+ +..|+.++- ++
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G---R---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C---C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 4566776 898888887653 2 2 789999999999999999 79999998765 358899874 46
Q ss_pred HHHHHHHH
Q 018797 320 SEVLTFLL 327 (350)
Q Consensus 320 ~eV~~~L~ 327 (350)
..+.+.++
T Consensus 553 s~Iv~av~ 560 (679)
T PRK01122 553 TKLIEVVE 560 (679)
T ss_pred HHHHHHHH
Confidence 66655554
No 122
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.72 E-value=0.034 Score=50.11 Aligned_cols=15 Identities=33% Similarity=0.760 Sum_probs=13.1
Q ss_pred CEEEEEecCcccCCC
Q 018797 73 KIAVFLNYDGTLSPI 87 (350)
Q Consensus 73 ~~lif~D~DGTLl~~ 87 (350)
++++++|+||||+..
T Consensus 3 ~~~vifDfDgTi~~~ 17 (219)
T PRK09552 3 SIQIFCDFDGTITNN 17 (219)
T ss_pred CcEEEEcCCCCCCcc
Confidence 568999999999983
No 123
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=94.70 E-value=0.05 Score=59.39 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC-CCC--CccceEEeC--CHHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS-TPK--ETKASYSLN--DPSEVLTFLL 327 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n-a~~--~t~A~y~l~--~~~eV~~~L~ 327 (350)
+|-..++.+-+ .| + .+.++||+.||.+|++.+ +.||+||+ +.+ +..|++++. +...+..+++
T Consensus 605 ~K~~iv~~lq~-~g---~---~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 605 HKMKIVKALQK-RG---D---VVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHHHH-CC---C---EEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 78766666443 33 3 899999999999999999 89999985 333 247899984 4666655543
No 124
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.68 E-value=0.031 Score=47.67 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=40.0
Q ss_pred EEEEEecCcccCCCCCCCCC--------------CCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 74 IAVFLNYDGTLSPIVDDPDR--------------VFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~--------------~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
+++++|+||||+.....+.. -..-|.+.+.|..+++.+.++|.|..+...+...+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHH
Confidence 57999999999986543211 113477888999998889999999999988887764
No 125
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.62 E-value=0.043 Score=60.85 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=45.4
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC
Q 018797 245 MEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS-STPK--ETKASYSLND 318 (350)
Q Consensus 245 lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~-na~~--~t~A~y~l~~ 318 (350)
-.+.|. +|..-|+.+.+. | + .+.++||+.||.+||+.+ ..||+|+ ++.+ +..|++++.+
T Consensus 727 ar~sP~---~K~~iV~~lq~~-g---~---~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~d 788 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR-K---A---FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSD 788 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc-C---C---eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEec
Confidence 344454 788888877653 2 2 788999999999999999 7999998 5544 2589999864
No 126
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.51 E-value=0.06 Score=48.46 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE-EEEcCCCC-----CccceEEeCCHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP-IIVSSTPK-----ETKASYSLNDPSEV 322 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~-Vav~na~~-----~t~A~y~l~~~~eV 322 (350)
-+...++.+++.+|++++ ++++|||+.+|+++-+.+ |.. |.+..... ...|++++.+..++
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 456789999999999877 999999999999999998 754 44433221 13577777776664
No 127
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.42 E-value=0.072 Score=58.03 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=47.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLND 318 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~~ 318 (350)
-+-.+.|. +|-.-|+.|.+. | + .+.++||+.||.++|+.+ ..||+|+++.+ +..|+.++-+
T Consensus 582 vfAr~~Pe---~K~~iV~~lq~~-G---~---vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 582 IFARLTPM---QKSRIIGLLKKA-G---H---TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILLE 644 (867)
T ss_pred EEEECCHH---HHHHHHHHHHhC-C---C---EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEec
Confidence 34456676 898888886543 3 2 789999999999999999 79999998765 3589998753
No 128
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.41 E-value=0.11 Score=56.89 Aligned_cols=62 Identities=19% Similarity=0.248 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 018797 242 KKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLND 318 (350)
Q Consensus 242 ~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~~ 318 (350)
.-+-.+.|. +|-.-|+.|.+ .| . -+..+||+.||-++|+.+ ..||+|+++.+ +..|+.++-+
T Consensus 616 ~VfAr~sPe---~K~~IV~~Lq~-~G---~---vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 616 TLFARLTPM---HKERIVTLLKR-EG---H---VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILLE 679 (902)
T ss_pred cEEEEcCHH---HHHHHHHHHHH-CC---C---EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEec
Confidence 346677887 89998888765 33 2 789999999999999999 79999998765 3589999854
No 129
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.37 E-value=0.046 Score=57.59 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=51.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--CH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLN--DP 319 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~--~~ 319 (350)
+-++.|. +|-..++.+.+. | + .+...||+.||-++|+.+ ..||+|+++.+ +..|+.++- +.
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G---H---IVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C---C---EEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 4566776 888888876543 2 2 688999999999999999 79999998766 358899974 45
Q ss_pred HHHHHHH
Q 018797 320 SEVLTFL 326 (350)
Q Consensus 320 ~eV~~~L 326 (350)
.-+.+.+
T Consensus 549 s~Iv~av 555 (673)
T PRK14010 549 TKLMEVV 555 (673)
T ss_pred HHHHHHH
Confidence 5554444
No 130
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.36 E-value=0.052 Score=48.67 Aligned_cols=35 Identities=14% Similarity=0.006 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 95 FMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 95 ~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
.+.+...+.|+.+++..+++|+||-....+..++.
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~ 102 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR 102 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHH
Confidence 45566777888887777899999999888777664
No 131
>PRK08238 hypothetical protein; Validated
Probab=94.33 E-value=0.11 Score=52.83 Aligned_cols=47 Identities=9% Similarity=-0.005 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhcccC--ceEeccCcce
Q 018797 96 MSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVELCN--VYYAGSHGMD 142 (350)
Q Consensus 96 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l~~--l~~i~~nGa~ 142 (350)
+.+++.+.|+++++. .+++|+|+.+...++.+++..+ ..++|+++..
T Consensus 73 ~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~~ 122 (479)
T PRK08238 73 YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFASDGTT 122 (479)
T ss_pred CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCcc
Confidence 458899999999988 4899999999988887654221 3466666543
No 132
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=94.29 E-value=0.12 Score=48.01 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCC-CCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC------------------------
Q 018797 255 KGHALEYLLDTLGLS-NPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK------------------------ 308 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~------------------------ 308 (350)
+...+...++.+|+. .+ ++++|||+.+|+.+=+.+ |+ .|.|..+..
T Consensus 160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T PRK13478 160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNA-----GMWTVGVILSGNELGLSEEEYQALSAAELAARRERA 231 (267)
T ss_pred ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHC-----CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHH
Confidence 356788899999985 45 899999999998877777 64 445544321
Q ss_pred -----CccceEEeCCHHHHHHHHHHHH
Q 018797 309 -----ETKASYSLNDPSEVLTFLLRLS 330 (350)
Q Consensus 309 -----~t~A~y~l~~~~eV~~~L~~l~ 330 (350)
+..|+++++++.++..+|..+.
T Consensus 232 ~~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 232 RARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2358999999999998887554
No 133
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=94.26 E-value=0.096 Score=45.90 Aligned_cols=30 Identities=27% Similarity=0.189 Sum_probs=21.0
Q ss_pred HHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 100 MRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 100 ~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+.+.|+.|+++ .+++|+|+.....+..+++
T Consensus 85 ~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 115 (201)
T TIGR01491 85 AEELVRWLKEKGLKTAIVSGGIMCLAKKVAE 115 (201)
T ss_pred HHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 35556666666 4788888888777776653
No 134
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=94.24 E-value=0.092 Score=45.06 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=45.9
Q ss_pred ccCCEEEEEecCcccCCCCCCCCC------------------------------CCCCHHHHHHHHHHHhcCCEEEEcCC
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDR------------------------------VFMSDEMRAAVREVAKYFPTAIISGR 119 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~------------------------------~~is~~~~~aL~~L~~~~~v~I~SGR 119 (350)
..++..+++|+|.||+.....|.. ..+-|...+.|.+|++...++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 568899999999999985443310 01235778899999877889999999
Q ss_pred ChhhHHhhhc
Q 018797 120 SREKVMGFVE 129 (350)
Q Consensus 120 ~~~~v~~~~~ 129 (350)
+...+...+.
T Consensus 83 ~~~yA~~vl~ 92 (156)
T TIGR02250 83 TRAYAQAIAK 92 (156)
T ss_pred cHHHHHHHHH
Confidence 9988887764
No 135
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=94.23 E-value=0.091 Score=45.47 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=31.2
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 249 PSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 249 p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
+. |..|+..++.+++.+ .+ .+++|||+.||+.|.+.+
T Consensus 145 ~~-g~~K~~~~~~~~~~~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 145 PC-GCCKGKVIHKLSEPK---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CC-CCCHHHHHHHHHhhc---Cc---eEEEECCCcchhchHhcC
Confidence 55 788999999998775 23 899999999999988776
No 136
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.18 E-value=0.076 Score=47.70 Aligned_cols=66 Identities=20% Similarity=0.083 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCC----CCccceEEeCCHHHHHHHHHH
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTP----KETKASYSLNDPSEVLTFLLR 328 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~----~~t~A~y~l~~~~eV~~~L~~ 328 (350)
..|..+++.+.. ..+ .+++|||+.||+.|.+.+ |+.++=+.-. ....+.+...+-.+|.+.|++
T Consensus 143 ~~K~~~l~~~~~----~~~---~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PND---YHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cCC---cEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 468888776542 333 899999999999999988 7766543210 112343345677888888876
Q ss_pred HH
Q 018797 329 LS 330 (350)
Q Consensus 329 l~ 330 (350)
..
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 54
No 137
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.17 E-value=0.061 Score=59.48 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC-CC--CccceEEeCC
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST-PK--ETKASYSLND 318 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na-~~--~t~A~y~l~~ 318 (350)
+|-.-|+.+-+ .| . -+.++||+.||.+||+.+ ..||+|++. .+ +..|++++.|
T Consensus 671 qK~~IV~~lq~-~g---~---vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 671 QKLIIVEGCQR-QG---A---IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred HHHHHHHHHHH-CC---C---EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence 56665555442 33 2 689999999999999999 799999964 33 3588999865
No 138
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.13 E-value=0.15 Score=44.53 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=34.8
Q ss_pred CEEEEEecCcccCCCCCC----CCCCCCCHHHHHHHHHHHhc-CCEEEEcCCC
Q 018797 73 KIAVFLNYDGTLSPIVDD----PDRVFMSDEMRAAVREVAKY-FPTAIISGRS 120 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~----p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 120 (350)
.+++++|.||||...... +..-.+-+.+.++|++|.+. .+++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 478999999998764311 11223446779999999888 5899999875
No 139
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=94.07 E-value=0.075 Score=45.63 Aligned_cols=32 Identities=22% Similarity=0.125 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 98 DEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 98 ~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+.+.+.|+.+.+. .+++|+||.....+..++.
T Consensus 76 ~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~ 108 (177)
T TIGR01488 76 PGARELISWLKERGIDTVIVSGGFDFFVEPVAE 108 (177)
T ss_pred cCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 5567777777766 4789999988887777653
No 140
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.06 E-value=0.068 Score=58.79 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=47.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS-STPK--ETKASYSLND 318 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~-na~~--~t~A~y~l~~ 318 (350)
+-.+.|. +|..-|+.|.+. | + .+.++||+.||.+||+.+ ..||+|+ ++.+ +..|++++.+
T Consensus 649 far~sPe---~K~~iV~~lq~~-g---~---vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~d 711 (941)
T TIGR01517 649 LARSSPL---DKQLLVLMLKDM-G---E---VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLD 711 (941)
T ss_pred EEECCHH---HHHHHHHHHHHC-C---C---EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEec
Confidence 4466676 899888887653 3 2 789999999999999999 7999999 6654 2578999864
No 141
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=94.00 E-value=0.043 Score=48.47 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
+.+..+++.++++.+ .++++||+.||..|++.+
T Consensus 182 k~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 182 KIFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hhHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 367888999998876 999999999999999987
No 142
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.97 E-value=0.098 Score=45.77 Aligned_cols=57 Identities=18% Similarity=0.108 Sum_probs=41.8
Q ss_pred CEEEEEecCcccCCCCCC-----------CC----------CCCCCHHHHHHHHHHHhc-CCEEEEcCC-ChhhHHhhhc
Q 018797 73 KIAVFLNYDGTLSPIVDD-----------PD----------RVFMSDEMRAAVREVAKY-FPTAIISGR-SREKVMGFVE 129 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~-----------p~----------~~~is~~~~~aL~~L~~~-~~v~I~SGR-~~~~v~~~~~ 129 (350)
.+|++||+|+||-++.-. |. ...+-+.+.+.|+.|.+. .+++|+|++ +...+..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 478999999999873211 11 123457889999999888 589999988 7777776665
No 143
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=93.89 E-value=0.1 Score=56.03 Aligned_cols=61 Identities=26% Similarity=0.287 Sum_probs=47.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLND 318 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~~ 318 (350)
-+-++.|. +|-.-|+.+.+ .| + -+.++||+.||-++|+.+ ..||+|+++.+ +..|+.++-+
T Consensus 514 vfAr~~Pe---~K~~iV~~lq~-~G---~---~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 514 GFAEVFPE---HKYEIVEILQK-RG---H---LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred EEEecCHH---HHHHHHHHHHh-cC---C---EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEc
Confidence 35567776 78888877653 33 2 799999999999999999 79999998765 3578998753
No 144
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.88 E-value=0.099 Score=57.20 Aligned_cols=62 Identities=23% Similarity=0.278 Sum_probs=49.5
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 018797 242 KKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK--ETKASYSLND 318 (350)
Q Consensus 242 ~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~--~t~A~y~l~~ 318 (350)
.-+-.+.|. +|-.-|+.|.+. | + -+..+||+.||-++|+.+ ..||+|+++.+ +..|+.++-|
T Consensus 616 ~VfAr~sPe---~K~~iV~~Lq~~-G---~---vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld 679 (903)
T PRK15122 616 TVFAKLTPL---QKSRVLKALQAN-G---H---TVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILLE 679 (903)
T ss_pred CEEEEeCHH---HHHHHHHHHHhC-C---C---EEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEec
Confidence 345667777 899888887653 3 2 788999999999999999 79999998765 3589999853
No 145
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.84 E-value=0.055 Score=47.04 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=27.5
Q ss_pred CHHHHHHHH---HHHcCCCCCCCcceEEEeCCCCCHHHHH
Q 018797 254 DKGHALEYL---LDTLGLSNPNDVLPLYIGDDRTDEDAFK 290 (350)
Q Consensus 254 ~KG~Al~~L---l~~lgi~~~~~~~vi~~GD~~ND~~Mf~ 290 (350)
+|..+++.+ ... +.+.. .++++||+.||++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 499999999 444 55554 9999999999999986
No 146
>PRK06769 hypothetical protein; Validated
Probab=93.77 E-value=0.095 Score=45.59 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=37.4
Q ss_pred CCEEEEEecCcccCCCCC--CCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 72 KKIAVFLNYDGTLSPIVD--DPDRVFMSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~--~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
..++|++|.||||..... .++.-.+-+.+++.|++|.+. .+++|+|+.+.
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 467899999999976421 112334558899999999988 58999998753
No 147
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.67 E-value=0.16 Score=48.79 Aligned_cols=58 Identities=21% Similarity=0.257 Sum_probs=44.5
Q ss_pred CCEEEEEecCcccCCCC--CC-CCC---CCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 72 KKIAVFLNYDGTLSPIV--DD-PDR---VFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~--~~-p~~---~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.+++|++|+|+||...+ ++ +.. ....+.+.++|++|.+. ..++|||..+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Confidence 46899999999999854 21 111 12347899999999988 5899999999998888764
No 148
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=93.58 E-value=0.12 Score=46.14 Aligned_cols=59 Identities=17% Similarity=0.079 Sum_probs=44.5
Q ss_pred ccCCEEEEEecCcccCCCCCC-C-CCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 70 KEKKIAVFLNYDGTLSPIVDD-P-DRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~-p-~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
..+++++++|+|+||+.+... + ..-..-|-+.+-|+.+.+++.|+|=|..+...+...+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l 78 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKM 78 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHH
Confidence 356789999999999975211 1 1123457788999999999999999999888777755
No 149
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.55 E-value=0.14 Score=49.19 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=34.2
Q ss_pred ceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCC--CC-----ccceEEeCCHHHHHHHH
Q 018797 275 LPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTP--KE-----TKASYSLNDPSEVLTFL 326 (350)
Q Consensus 275 ~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~--~~-----t~A~y~l~~~~eV~~~L 326 (350)
.+++|||+. +|+.+=+.+ |+ +|.|..+. .+ -.++|++++..++..+|
T Consensus 265 ~~~mIGD~~~tDI~ga~~~-----G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 265 ALYMVGDNPASDIIGAQNY-----GWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred eEEEEcCChhhhhhhHHhC-----CceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 899999997 999876666 64 67776641 11 24688998887777665
No 150
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=93.51 E-value=0.12 Score=44.47 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=43.5
Q ss_pred CEEEEEecCcccCCCCCCCCC--C-----------------CCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 73 KIAVFLNYDGTLSPIVDDPDR--V-----------------FMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~--~-----------------~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
+..+++|+|+||+.....|.. . ..-|.+.+.|.+|.+...++|.|.-+...+..++.
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLD 76 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHH
Confidence 457899999999986544421 0 23467889999998888899999999888777764
No 151
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=93.22 E-value=0.12 Score=57.60 Aligned_cols=69 Identities=22% Similarity=0.180 Sum_probs=51.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCC--HHH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLND--PSE 321 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~--~~e 321 (350)
+--+.|. +|..-|+.|.+ .| . .+..+||+.||.+||+.+ ..||+|+++.-...|++++.+ -+.
T Consensus 782 fAR~sP~---qK~~iV~~lq~-~g---~---~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQK-LD---Y---TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASISC 846 (1054)
T ss_pred EEecCHH---HHHHHHHHHHh-CC---C---eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHHH
Confidence 4456776 88888777654 33 2 789999999999999999 799999987444578888764 345
Q ss_pred HHHHHH
Q 018797 322 VLTFLL 327 (350)
Q Consensus 322 V~~~L~ 327 (350)
|...++
T Consensus 847 I~~~I~ 852 (1054)
T TIGR01657 847 VPNVIR 852 (1054)
T ss_pred HHHHHH
Confidence 555544
No 152
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=93.15 E-value=0.2 Score=47.05 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=15.8
Q ss_pred HHHhccCCEEEEEecCcccCC
Q 018797 66 MKAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~ 86 (350)
+-+.....++++||+||||++
T Consensus 55 ~~~~~~~~k~vIFDlDGTLiD 75 (273)
T PRK13225 55 PQSYPQTLQAIIFDFDGTLVD 75 (273)
T ss_pred hhhhhhhcCEEEECCcCcccc
Confidence 333444567899999999998
No 153
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.05 E-value=0.12 Score=48.42 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=34.9
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
+...+++|+||||.. ....=|...++|++|+++ .+++++|-.+.
T Consensus 7 ~y~~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~g~~~iflTNn~~ 51 (269)
T COG0647 7 KYDGFLFDLDGVLYR------GNEAIPGAAEALKRLKAAGKPVIFLTNNST 51 (269)
T ss_pred hcCEEEEcCcCceEe------CCccCchHHHHHHHHHHcCCeEEEEeCCCC
Confidence 455699999999998 234557899999999999 58888875543
No 154
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=92.99 E-value=0.22 Score=45.79 Aligned_cols=64 Identities=14% Similarity=0.120 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCC-CCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC------------------------
Q 018797 255 KGHALEYLLDTLGLS-NPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK------------------------ 308 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~------------------------ 308 (350)
+-......++.+|+. .+ ++++|||+.+|+.+=+.+ |. .|.|..+..
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA-----GMWTVGLILSSNELGLSEEEYRALDPAELEARRAEA 229 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC-----CCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHH
Confidence 356778889999984 55 899999999999877777 63 455544321
Q ss_pred -----CccceEEeCCHHHHHHHH
Q 018797 309 -----ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 309 -----~t~A~y~l~~~~eV~~~L 326 (350)
+..|+++++++.++..+|
T Consensus 230 ~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 230 TARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHhcCCCEehhcHHHHHHhh
Confidence 135889998888876554
No 155
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=92.79 E-value=0.18 Score=45.03 Aligned_cols=65 Identities=14% Similarity=0.080 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHcCCC-CCCCcceEEEeCCCCCHHHHHHHHhCCCceEE--EEcCCCC------CccceEEeCCHHHHHH
Q 018797 254 DKGHALEYLLDTLGLS-NPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPI--IVSSTPK------ETKASYSLNDPSEVLT 324 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~V--av~na~~------~t~A~y~l~~~~eV~~ 324 (350)
-+...+..+++++|+. ++ .+++|||+.+|+.+=+.+ |+.+ .+..+.. ...|++++.+..++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 3568899999999996 45 999999999999988888 7654 4433211 2357888888877665
Q ss_pred HH
Q 018797 325 FL 326 (350)
Q Consensus 325 ~L 326 (350)
.|
T Consensus 218 ~~ 219 (220)
T TIGR03351 218 LL 219 (220)
T ss_pred hh
Confidence 43
No 156
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.75 E-value=0.35 Score=47.56 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCCC---ccceEEeCCHHHH-HHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPKE---TKASYSLNDPSEV-LTFLLR 328 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~~---t~A~y~l~~~~eV-~~~L~~ 328 (350)
-+.......++.+|+.++ .+++|||+.+|+.+=+.+ |+ .|.|...... ..|++++.+.+++ ...|+.
T Consensus 273 P~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~A-----Gm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~ 344 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDA-----RMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKN 344 (381)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhh
Confidence 356788899999999887 999999999998877777 54 4556553321 3589999999997 567777
Q ss_pred HHhcccC
Q 018797 329 LSRWRKS 335 (350)
Q Consensus 329 l~~~~~~ 335 (350)
|+....+
T Consensus 345 l~~~~~~ 351 (381)
T PLN02575 345 LADIESP 351 (381)
T ss_pred hhhcCcc
Confidence 7776543
No 157
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.63 E-value=0.036 Score=50.70 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=38.8
Q ss_pred cCCEEEEEecCcccCCCCCC------------CC---------CCCCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 018797 71 EKKIAVFLNYDGTLSPIVDD------------PD---------RVFMSDEMRAAVREVAKY-FPTAIISGRSREK 123 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~------------p~---------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 123 (350)
.++.+|+||+|+|++..... |. ....-|.+++.++.+.++ +.|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence 68999999999998752110 10 122335588999999998 5899999998774
No 158
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.43 E-value=0.3 Score=43.47 Aligned_cols=65 Identities=20% Similarity=0.337 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHc-CCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCC--C-C-CccceEEeCCHHHHHHHH
Q 018797 254 DKGHALEYLLDTL-GLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSST--P-K-ETKASYSLNDPSEVLTFL 326 (350)
Q Consensus 254 ~KG~Al~~Ll~~l-gi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na--~-~-~t~A~y~l~~~~eV~~~L 326 (350)
-+....+.+++.+ |++++ ++++|||+. +|+.+=+.+ |. +|.+... + + ...++|++.+..++..+|
T Consensus 153 P~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 153 PDKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CCHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 3456788999999 99877 999999998 799877777 65 3444332 1 1 236788999988887654
No 159
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=92.32 E-value=0.16 Score=43.97 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=13.1
Q ss_pred CEEEEEecCcccCCC
Q 018797 73 KIAVFLNYDGTLSPI 87 (350)
Q Consensus 73 ~~lif~D~DGTLl~~ 87 (350)
+.+++||+||||++.
T Consensus 1 ~~~iiFD~dgTL~~~ 15 (188)
T TIGR01489 1 KVVVVSDFDGTITLN 15 (188)
T ss_pred CeEEEEeCCCcccCC
Confidence 468999999999984
No 160
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=92.28 E-value=0.23 Score=44.35 Aligned_cols=16 Identities=38% Similarity=0.376 Sum_probs=13.2
Q ss_pred CCEEEEEecCcccCCC
Q 018797 72 KKIAVFLNYDGTLSPI 87 (350)
Q Consensus 72 k~~lif~D~DGTLl~~ 87 (350)
..++++||+||||++.
T Consensus 5 ~~~~iiFD~DGTL~d~ 20 (226)
T PRK13222 5 DIRAVAFDLDGTLVDS 20 (226)
T ss_pred cCcEEEEcCCcccccC
Confidence 4568999999999963
No 161
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=92.17 E-value=0.17 Score=45.37 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 96 MSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 96 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+.+.+.+.|+.|.++ .+++|+||.....+..++.
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~ 105 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMDFFVYPLLE 105 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 445566777777776 5899999998877777653
No 162
>PRK11590 hypothetical protein; Provisional
Probab=92.11 E-value=0.19 Score=45.07 Aligned_cols=43 Identities=19% Similarity=0.082 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS 305 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n 305 (350)
|-.|-..|+.. ++.+.. ...+-|||.||++||+.+ +.+++|..
T Consensus 161 g~~K~~~l~~~---~~~~~~---~~~aY~Ds~~D~pmL~~a-----~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERK---IGTPLR---LYSGYSDSKQDNPLLYFC-----QHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHH---hCCCcc---eEEEecCCcccHHHHHhC-----CCCEEECc
Confidence 44555444443 454433 678999999999999999 88998854
No 163
>PRK11587 putative phosphatase; Provisional
Probab=91.89 E-value=0.38 Score=43.11 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC---CccceEEeCCHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK---ETKASYSLNDPSEV 322 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~---~t~A~y~l~~~~eV 322 (350)
+.......++.+|++++ ++++|||+.+|+.+=+.+ |. .|.|.+... ...|++++.+..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 35677888899999877 999999999998876666 64 567765432 13678888877664
No 164
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=91.83 E-value=0.33 Score=44.01 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE--EEEcCCCC--CccceEEeCCHHHHHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP--IIVSSTPK--ETKASYSLNDPSEVLTFLLRL 329 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~--Vav~na~~--~t~A~y~l~~~~eV~~~L~~l 329 (350)
+-...+.+++.+|++++ .+++|||+.+|+.+=+.+ |.. +.|.+... +..+...+.+.+++.++|..|
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 36678999999999887 999999999997665555 663 55666432 234555566667777777665
No 165
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=91.80 E-value=0.37 Score=42.33 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=24.9
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 248 RPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 248 ~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.+- |.+|+..+..+.+.. + .++++||+..|+++-+..
T Consensus 142 s~f-G~dK~~vI~~l~e~~----e---~~fy~GDsvsDlsaakls 178 (220)
T COG4359 142 SQF-GHDKSSVIHELSEPN----E---SIFYCGDSVSDLSAAKLS 178 (220)
T ss_pred ccc-CCCcchhHHHhhcCC----c---eEEEecCCcccccHhhhh
Confidence 344 788887777766532 2 688888888887765444
No 166
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=91.68 E-value=0.21 Score=44.95 Aligned_cols=43 Identities=21% Similarity=0.088 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS 305 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n 305 (350)
|-.|-..|+..+ +.+. ....+.|||.||.+||+.+ |.+++|..
T Consensus 160 g~~Kv~rl~~~~---~~~~---~~~~aYsDS~~D~pmL~~a-----~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPL---KLYSGYSDSKQDNPLLAFC-----EHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHh---CCCh---hheEEecCCcccHHHHHhC-----CCcEEECc
Confidence 445555555444 4332 2678999999999999999 88998854
No 167
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=91.65 E-value=0.35 Score=43.82 Aligned_cols=14 Identities=43% Similarity=0.541 Sum_probs=12.3
Q ss_pred CEEEEEecCcccCC
Q 018797 73 KIAVFLNYDGTLSP 86 (350)
Q Consensus 73 ~~lif~D~DGTLl~ 86 (350)
.++++||+||||++
T Consensus 2 ~~avIFD~DGvLvD 15 (221)
T COG0637 2 IKAVIFDMDGTLVD 15 (221)
T ss_pred CcEEEEcCCCCcCc
Confidence 36799999999998
No 168
>PRK09449 dUMP phosphatase; Provisional
Probab=91.53 E-value=0.62 Score=41.70 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCC-CCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcC-CCC---CccceEEeCCHHHHHHHHH
Q 018797 256 GHALEYLLDTLGLS-NPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSS-TPK---ETKASYSLNDPSEVLTFLL 327 (350)
Q Consensus 256 G~Al~~Ll~~lgi~-~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~n-a~~---~t~A~y~l~~~~eV~~~L~ 327 (350)
-...+.+++.+|+. .+ .+++|||+. +|+.+=+.+ |+ +|.+.. +.. ...++|++.+..++.++|+
T Consensus 153 p~~~~~~~~~~~~~~~~---~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 153 VAIFDYALEQMGNPDRS---RVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHHHHHHcCCCCcc---cEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 46788999999974 34 899999997 798877766 65 355542 211 2368999999999888765
No 169
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=91.48 E-value=0.38 Score=44.22 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC-----CccceEEeCCHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK-----ETKASYSLNDPSE 321 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~-----~t~A~y~l~~~~e 321 (350)
-+.......++++|++++ .+++|||+.+|+.+=+.+ |+ .|.+..+.. +..|+|++.++.+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 345778899999999877 999999999999877776 65 344543221 2368899998877
No 170
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=91.46 E-value=0.3 Score=42.99 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 96 MSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 96 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+-+.+.+.|+.+++. .+++|+||.....+..+++
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 345566666776666 4778888877766666543
No 171
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.15 E-value=0.26 Score=46.02 Aligned_cols=53 Identities=23% Similarity=0.327 Sum_probs=38.0
Q ss_pred cCCEEEEEecCcccCCCC---------CCC------C-------CCCCCHHHHHHHHHHHhc-CCEEEEcCCChhh
Q 018797 71 EKKIAVFLNYDGTLSPIV---------DDP------D-------RVFMSDEMRAAVREVAKY-FPTAIISGRSREK 123 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~---------~~p------~-------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 123 (350)
..+-++++|+|+|++... ..+ + .+..-+.+++..+.+.+. +.|+++|||+-..
T Consensus 99 ~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 99 HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 356889999999999310 000 1 233456889999999988 5899999998643
No 172
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=91.13 E-value=0.18 Score=44.31 Aligned_cols=46 Identities=17% Similarity=0.285 Sum_probs=33.1
Q ss_pred CEEEEEecCcccCCCCC----CCCCCCCCHHHHHHHHHHHhc-CCEEEEcC
Q 018797 73 KIAVFLNYDGTLSPIVD----DPDRVFMSDEMRAAVREVAKY-FPTAIISG 118 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~----~p~~~~is~~~~~aL~~L~~~-~~v~I~SG 118 (350)
.+++|+|-||||--... .+++-..-+.+++|+.+|.+. ..++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 67899999999986322 122234456788999999887 47888774
No 173
>PLN02940 riboflavin kinase
Probab=90.45 E-value=0.45 Score=46.87 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=21.0
Q ss_pred HHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 018797 100 MRAAVREVAKY-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 100 ~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 128 (350)
+.+.|+.|.+. .+++|+|+.+...+...+
T Consensus 98 v~elL~~Lk~~g~~l~IvTn~~~~~~~~~l 127 (382)
T PLN02940 98 ANRLIKHLKSHGVPMALASNSPRANIEAKI 127 (382)
T ss_pred HHHHHHHHHHCCCcEEEEeCCcHHHHHHHH
Confidence 45567777776 589999998887766544
No 174
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=90.18 E-value=0.45 Score=41.30 Aligned_cols=48 Identities=27% Similarity=0.416 Sum_probs=36.7
Q ss_pred EEEEEecCcccCCCC---CCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 74 IAVFLNYDGTLSPIV---DDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 74 ~lif~D~DGTLl~~~---~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
+++|+|.||||.... ..+++..+-+.+.++|++|++. .+++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 689999999999422 1233444567899999999988 68999998764
No 175
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.00 E-value=0.18 Score=43.73 Aligned_cols=36 Identities=8% Similarity=0.018 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-+-..+..+++.+|++++ .+++|||+.+|+.+=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 455779999999999866 999999999998877766
No 176
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=89.93 E-value=0.6 Score=41.61 Aligned_cols=60 Identities=17% Similarity=0.264 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCCC-------CccceEEeCCHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTPK-------ETKASYSLNDPSEV 322 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~~-------~t~A~y~l~~~~eV 322 (350)
+....+.+++.+|++.+ .+++|||+. +|+.+=+.+ |+ +|.+..... ...++|++.+..++
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 45678899999999877 999999997 999888877 65 455654322 12466777766543
No 177
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=89.85 E-value=0.56 Score=44.25 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceE-EEEcCCC--CC--ccceEEeCCHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYP-IIVSSTP--KE--TKASYSLNDPSEV 322 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~-Vav~na~--~~--t~A~y~l~~~~eV 322 (350)
+...+..+++.+|++++ .+++|||+.+|+.+=+.+ |+. |+|..+. .+ ..|++++.+..++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 35688899999999877 999999999999988888 754 4454432 11 3589999887654
No 178
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.71 E-value=0.86 Score=42.41 Aligned_cols=64 Identities=9% Similarity=0.081 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCC-CC--ccceEEeCCHHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTP-KE--TKASYSLNDPSEVLTFL 326 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~-~~--t~A~y~l~~~~eV~~~L 326 (350)
+-.....+++++|++.+ .+++|||+.+|+.+=+.+ |+ .|++.... .. ..|++++.++.++...+
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVD 234 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHHH
Confidence 35678899999999887 999999999998877777 65 34454221 11 36899999998865433
No 179
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=89.58 E-value=0.86 Score=45.96 Aligned_cols=67 Identities=19% Similarity=0.213 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCC--C--CccceEEeCCHHHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTP--K--ETKASYSLNDPSEVLTFLLR 328 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~--~--~t~A~y~l~~~~eV~~~L~~ 328 (350)
.|-..+...++.++. + ++++|||+.+|+.+-+.+ |+ .|.+.... . ...++|++.+..++..+|..
T Consensus 386 ~kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 386 NKSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST 455 (459)
T ss_pred CCcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence 355677888887764 3 899999999999988888 75 55564432 1 13689999999999888765
Q ss_pred HH
Q 018797 329 LS 330 (350)
Q Consensus 329 l~ 330 (350)
+.
T Consensus 456 ~~ 457 (459)
T PRK06698 456 VQ 457 (459)
T ss_pred Hh
Confidence 53
No 180
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.44 E-value=0.27 Score=53.94 Aligned_cols=61 Identities=23% Similarity=0.303 Sum_probs=46.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC-CCC--CccceEEeCC
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS-TPK--ETKASYSLND 318 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n-a~~--~t~A~y~l~~ 318 (350)
-+--+.|. +|..-|+.|-++ | . -+.+.||+.||.+|++.+ ..||+|+. +.+ +..|+.++.+
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g---~---vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-G---H---VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-C---C---EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEeec
Confidence 35566776 898888877665 4 2 899999999999999999 79999885 443 2467777654
No 181
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=89.27 E-value=0.19 Score=44.25 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFK 290 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~ 290 (350)
-..+..+++.+|++.+ ++++|||+.+|+.+=+
T Consensus 164 p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 164 PEPLILAAKALGVEAC---HAAMVGDTVDDIITGR 195 (197)
T ss_pred HHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHHH
Confidence 5667888999999877 9999999999987543
No 182
>PRK11587 putative phosphatase; Provisional
Probab=88.99 E-value=0.21 Score=44.86 Aligned_cols=29 Identities=21% Similarity=0.159 Sum_probs=20.2
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
.+.|+||+||||++. . +...++++++.+.
T Consensus 3 ~k~viFDlDGTL~Ds-----~----~~~~~a~~~~~~~ 31 (218)
T PRK11587 3 CKGFLFDLDGTLVDS-----L----PAVERAWSNWADR 31 (218)
T ss_pred CCEEEEcCCCCcCcC-----H----HHHHHHHHHHHHH
Confidence 467999999999993 1 2345666666555
No 183
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=88.84 E-value=0.61 Score=45.89 Aligned_cols=17 Identities=6% Similarity=0.247 Sum_probs=14.4
Q ss_pred ccCCEEEEEecCcccCC
Q 018797 70 KEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~ 86 (350)
...-+.++||+||||++
T Consensus 128 ~~~~~~VIFDlDGTLID 144 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIE 144 (381)
T ss_pred cCCCCEEEEcCcCccee
Confidence 35677899999999997
No 184
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=88.81 E-value=0.28 Score=43.22 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVI 292 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~ 292 (350)
....+.+++.+|++++ .+++|||+. +|+.+=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4568889999999877 999999997 898877666
No 185
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=88.76 E-value=0.24 Score=44.14 Aligned_cols=14 Identities=36% Similarity=0.486 Sum_probs=12.7
Q ss_pred CEEEEEecCcccCC
Q 018797 73 KIAVFLNYDGTLSP 86 (350)
Q Consensus 73 ~~lif~D~DGTLl~ 86 (350)
.++|+||+||||++
T Consensus 3 ~~~viFD~DGTL~d 16 (214)
T PRK13288 3 INTVLFDLDGTLIN 16 (214)
T ss_pred ccEEEEeCCCcCcc
Confidence 46899999999998
No 186
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=88.70 E-value=0.83 Score=49.03 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=51.4
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC--C
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLN--D 318 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~--~ 318 (350)
-+-|+.|. +|..-++.|.+.-+ -++.+||+.||-++|..+ ..||+++.+..- ..|+.++= +
T Consensus 765 V~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~ 829 (951)
T KOG0207|consen 765 VYAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRND 829 (951)
T ss_pred EEeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccc
Confidence 35677787 78877777765432 789999999999999999 699999988542 47899862 3
Q ss_pred HHHHHHHH
Q 018797 319 PSEVLTFL 326 (350)
Q Consensus 319 ~~eV~~~L 326 (350)
-.+|...+
T Consensus 830 L~~v~~ai 837 (951)
T KOG0207|consen 830 LRDVPFAI 837 (951)
T ss_pred hhhhHHHH
Confidence 34554444
No 187
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.55 E-value=0.33 Score=51.52 Aligned_cols=60 Identities=23% Similarity=0.265 Sum_probs=45.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVS-STPK--ETKASYSLND 318 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~-na~~--~t~A~y~l~~ 318 (350)
+--+.|. +|-+-++.|-+ .| + .+..-||+.||-++||.+ ..||||| ++.+ +++|+-+|.|
T Consensus 658 FaR~~P~---HK~kIVeaLq~-~g---e---ivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 658 FARAEPQ---HKLKIVEALQS-RG---E---VVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred EEecCch---hHHHHHHHHHh-cC---C---EEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEec
Confidence 3445565 88888877654 22 2 677789999999999999 7999999 7765 4688999864
No 188
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=88.43 E-value=0.19 Score=51.15 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=43.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCC
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLND 318 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~ 318 (350)
+-++.|. +|...++.+.+. | . .++++||+.||.+|++.+ +.||+|+ + ...|+.++-+
T Consensus 387 ~~~~~p~---~K~~~v~~l~~~-g---~---~v~~vGDg~nD~~al~~A-----dvgia~~-a--~~~adivl~~ 443 (499)
T TIGR01494 387 FARVTPE---EKAALVEALQKK-G---R---VVAMTGDGVNDAPALKKA-----DVGIAMG-A--KAAADIVLLD 443 (499)
T ss_pred eeccCHH---HHHHHHHHHHHC-C---C---EEEEECCChhhHHHHHhC-----CCccccc-h--HHhCCeEEec
Confidence 4456665 788777776432 2 2 799999999999999999 7899997 2 3468888753
No 189
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.35 E-value=0.31 Score=44.46 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCC-CCCHHHHHHHHhCCCce-EEEEcCCCCC--------ccceEEeCCHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDD-RTDEDAFKVIKGRGQGY-PIIVSSTPKE--------TKASYSLNDPSEVLT 324 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~-~ND~~Mf~~~~~~~~g~-~Vav~na~~~--------t~A~y~l~~~~eV~~ 324 (350)
+.......++.+|++++ ++++|||+ ..|+..=+.+ |+ +|.+...... ..+++.+.+-.++.+
T Consensus 165 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 45677888899999877 99999999 5998876666 64 4445432111 235556666566554
Q ss_pred H
Q 018797 325 F 325 (350)
Q Consensus 325 ~ 325 (350)
+
T Consensus 237 ~ 237 (238)
T PRK10748 237 L 237 (238)
T ss_pred h
Confidence 4
No 190
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=88.33 E-value=0.49 Score=39.26 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=41.6
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhcc
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVEL 130 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~l 130 (350)
.+.++++|+.. ...+=+++.+.|++|.+...++|+||-.+..+.++..+
T Consensus 17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~ 65 (152)
T COG4087 17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF 65 (152)
T ss_pred ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH
Confidence 35689999998 35677899999999999999999999999988887653
No 191
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=88.31 E-value=0.65 Score=41.37 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=20.3
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
.++|+||+||||++. ...+......+.+.+.+.
T Consensus 2 ~~~viFDlDGTL~ds-----~~~~~~~~~~~~~~~~~~ 34 (221)
T TIGR02253 2 IKAIFFDLDDTLIDT-----SGLAEKARRNAIEVLIEA 34 (221)
T ss_pred ceEEEEeCCCCCcCC-----CCccCHHHHHHHHHHHHC
Confidence 467999999999994 223333334444445544
No 192
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=87.64 E-value=0.31 Score=46.03 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=14.8
Q ss_pred ccCCEEEEEecCcccCC
Q 018797 70 KEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~ 86 (350)
..+.++|+||+||||++
T Consensus 37 ~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 37 SALPEALLFDCDGVLVE 53 (286)
T ss_pred ccCCcEEEEeCceeEEc
Confidence 35668899999999999
No 193
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=87.63 E-value=0.3 Score=44.91 Aligned_cols=30 Identities=30% Similarity=0.244 Sum_probs=20.6
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+.+.|+||+||||++. . +-..++++++.+.
T Consensus 21 ~~k~viFDlDGTLiDs-----~----~~~~~a~~~~~~~ 50 (248)
T PLN02770 21 PLEAVLFDVDGTLCDS-----D----PLHYYAFREMLQE 50 (248)
T ss_pred ccCEEEEcCCCccCcC-----H----HHHHHHHHHHHHH
Confidence 4568999999999993 1 2345566665544
No 194
>PLN02645 phosphoglycolate phosphatase
Probab=87.62 E-value=1.9 Score=41.16 Aligned_cols=50 Identities=6% Similarity=0.095 Sum_probs=39.5
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGF 127 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~ 127 (350)
+.++++||+||||... . .+-+...++|++|+++ .+++++|+|+......+
T Consensus 27 ~~~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~ 77 (311)
T PLN02645 27 SVETFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQY 77 (311)
T ss_pred hCCEEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHH
Confidence 4668999999999983 2 3457789999999998 58999999995544443
No 195
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=87.61 E-value=0.54 Score=40.90 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=31.2
Q ss_pred CEEEEEecCcccCCCCCC-----C-----C----------CCCCCHHHHHHHHHHHhc-CCEEEEcCCChh-hHHhhhcc
Q 018797 73 KIAVFLNYDGTLSPIVDD-----P-----D----------RVFMSDEMRAAVREVAKY-FPTAIISGRSRE-KVMGFVEL 130 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~-----p-----~----------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~-~v~~~~~l 130 (350)
.+||+||+|+||-+.--+ | . .-.+-+....+|+.|... ..+++||--+.. ..+++++.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~ 82 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL 82 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence 468999999999984211 1 0 012335678888888877 578888854433 44455543
No 196
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=87.43 E-value=0.54 Score=40.81 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
+-...+.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 34688899999999877 999999999887665555
No 197
>PRK11590 hypothetical protein; Provisional
Probab=87.37 E-value=0.33 Score=43.51 Aligned_cols=15 Identities=40% Similarity=0.747 Sum_probs=13.4
Q ss_pred CCEEEEEecCcccCC
Q 018797 72 KKIAVFLNYDGTLSP 86 (350)
Q Consensus 72 k~~lif~D~DGTLl~ 86 (350)
++++++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 677999999999995
No 198
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=86.46 E-value=0.36 Score=41.67 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
+....+.+++.+|++.+ .+++|||+.+|+.+=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 34577899999999876 999999999999887777
No 199
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=86.41 E-value=0.48 Score=42.31 Aligned_cols=28 Identities=21% Similarity=0.175 Sum_probs=19.7
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
++|+||+||||++. . +...++++++.+.
T Consensus 2 k~iiFD~DGTL~ds-----~----~~~~~~~~~~~~~ 29 (220)
T TIGR03351 2 SLVVLDMAGTTVDE-----D----GLVYRALRQAVTA 29 (220)
T ss_pred cEEEEecCCCeecc-----C----chHHHHHHHHHHH
Confidence 57899999999983 1 2456666666554
No 200
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=86.22 E-value=0.7 Score=42.38 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=13.2
Q ss_pred CEEEEEecCcccCCC
Q 018797 73 KIAVFLNYDGTLSPI 87 (350)
Q Consensus 73 ~~lif~D~DGTLl~~ 87 (350)
.++|+||+||||++.
T Consensus 2 ~k~viFD~DGTLiDs 16 (253)
T TIGR01422 2 IEAVIFDWAGTTVDF 16 (253)
T ss_pred ceEEEEeCCCCeecC
Confidence 568999999999993
No 201
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=85.63 E-value=0.76 Score=42.95 Aligned_cols=29 Identities=28% Similarity=0.305 Sum_probs=21.1
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
.++|+||+||||++. .+...+++.++.+.
T Consensus 13 ~k~viFDlDGTL~Ds---------~~~~~~a~~~~~~~ 41 (272)
T PRK13223 13 PRLVMFDLDGTLVDS---------VPDLAAAVDRMLLE 41 (272)
T ss_pred CCEEEEcCCCccccC---------HHHHHHHHHHHHHH
Confidence 458999999999993 13456777776655
No 202
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=85.61 E-value=0.76 Score=51.03 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=32.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-++-+|.. =.-|+.-++.+.+..+. .+++|||+.||..|++.+
T Consensus 771 sViCCR~s-PlQKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 771 SVICCRVS-PLQKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred EEEEccCC-HHHHHHHHHHHHhcCCc------eEEEeeCCCccchheeeC
Confidence 34555544 45788888777544443 899999999999999988
No 203
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=85.52 E-value=0.52 Score=41.74 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=31.8
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHH
Q 018797 248 RPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIK 293 (350)
Q Consensus 248 ~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~ 293 (350)
+.. +-.|+.+|..|.+ +.+.. .++.+||+.||++|..-+.
T Consensus 154 tsd-sggKa~~i~~lrk--~~~~~---~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 154 TSD-SGGKAEVIALLRK--NYNYK---TIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred ccc-CCccHHHHHHHHh--CCChh---eeEEecCCccccccCCchh
Confidence 344 5689999999999 44444 9999999999999887654
No 204
>PHA02597 30.2 hypothetical protein; Provisional
Probab=85.23 E-value=0.42 Score=41.97 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCCC--ccceEEeCCHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPKE--TKASYSLNDPSEVL 323 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~~--t~A~y~l~~~~eV~ 323 (350)
.|-..+..+++.+| + + .+++|||+.+|+.+=+.+-. |+ .|.|..+..+ ..+.|.+.+..|+.
T Consensus 131 ~kp~~~~~a~~~~~-~-~---~~v~vgDs~~di~aA~~a~~---Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 131 SKEKLFIKAKEKYG-D-R---VVCFVDDLAHNLDAAHEALS---QLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred ccHHHHHHHHHHhC-C-C---cEEEeCCCHHHHHHHHHHHc---CCcEEEecchhhccccchhhhhccHHHHh
Confidence 35678899999999 3 3 79999999999765554310 33 4455443322 24557777766553
No 205
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=84.84 E-value=0.59 Score=41.57 Aligned_cols=36 Identities=17% Similarity=0.016 Sum_probs=21.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeC---CCCCHHHHHHHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGD---DRTDEDAFKVIK 293 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD---~~ND~~Mf~~~~ 293 (350)
..++.+++.+++... ++.+++.+| ...|-++|+.+-
T Consensus 124 ~~~~~~l~~~~l~~~-fd~i~~~~~~~~~KP~~~~~~~~~ 162 (224)
T TIGR02254 124 ETQYKRLRKSGLFPF-FDDIFVSEDAGIQKPDKEIFNYAL 162 (224)
T ss_pred HHHHHHHHHCCcHhh-cCEEEEcCccCCCCCCHHHHHHHH
Confidence 344667888888642 335555544 246766666543
No 206
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=84.62 E-value=0.79 Score=39.47 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-+-...+..+++++++.+ .+++|||+.+|+.+-+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 456778899999999876 999999999998887777
No 207
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=83.92 E-value=0.52 Score=42.66 Aligned_cols=15 Identities=40% Similarity=0.490 Sum_probs=13.1
Q ss_pred CCEEEEEecCcccCC
Q 018797 72 KKIAVFLNYDGTLSP 86 (350)
Q Consensus 72 k~~lif~D~DGTLl~ 86 (350)
+.++|+||+||||++
T Consensus 9 ~~k~vIFDlDGTL~d 23 (224)
T PRK14988 9 DVDTVLLDMDGTLLD 23 (224)
T ss_pred cCCEEEEcCCCCccc
Confidence 356799999999998
No 208
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=83.76 E-value=0.81 Score=39.17 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=25.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDA 288 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~M 288 (350)
-...+.+++.+|++++ ++++|||+..|+.+
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHH
Confidence 4556788899999877 99999999999765
No 209
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=83.73 E-value=0.6 Score=41.88 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=14.5
Q ss_pred cCCEEEEEecCcccCCC
Q 018797 71 EKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~ 87 (350)
.+.+.|+||+||||++.
T Consensus 5 ~~~k~iiFD~DGTL~d~ 21 (222)
T PRK10826 5 RQILAAIFDMDGLLIDS 21 (222)
T ss_pred ccCcEEEEcCCCCCCcC
Confidence 45788999999999983
No 210
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=83.66 E-value=1.7 Score=35.50 Aligned_cols=36 Identities=28% Similarity=0.292 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHc-CCCCCCCcceEEEeC-CCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTL-GLSNPNDVLPLYIGD-DRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~l-gi~~~~~~~vi~~GD-~~ND~~Mf~~~ 292 (350)
-|..+++.+++.+ +++.+ ++++||| ..+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 59877 9999999 79999888777
No 211
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=83.44 E-value=1.1 Score=42.12 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=43.5
Q ss_pred ccCCEEEEEecCcccCCCCC-CCC-----------CCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 018797 70 KEKKIAVFLNYDGTLSPIVD-DPD-----------RVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~-~p~-----------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 128 (350)
...+..|++|+|-||+.... +.. ...++++.++-+++|.++ .|+=|-+..+.++=.+++
T Consensus 19 g~~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m 90 (277)
T TIGR01544 19 GAAKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYM 90 (277)
T ss_pred ChhheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHH
Confidence 36788999999999998642 211 346788889989998877 688888787776544443
No 212
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=83.39 E-value=0.92 Score=39.02 Aligned_cols=48 Identities=15% Similarity=0.285 Sum_probs=34.3
Q ss_pred CEEEEEecCcccCCCCC------CCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCC
Q 018797 73 KIAVFLNYDGTLSPIVD------DPDRVFMSDEMRAAVREVAKY-FPTAIISGRS 120 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~------~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 120 (350)
++++|||.||||..... .++.-.+-+.+.++|++|.++ .+++|+|-.+
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 46899999999988321 111223446788999999987 5888888653
No 213
>PLN02940 riboflavin kinase
Probab=83.35 E-value=2 Score=42.31 Aligned_cols=61 Identities=23% Similarity=0.139 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC----CccceEEeCCHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK----ETKASYSLNDPSEV 322 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~----~t~A~y~l~~~~eV 322 (350)
-+.......++.+|++++ ++++|||+.+|+.+=+.+ |+ .|.|..... ...|++++.+..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 456788999999999887 999999999998877777 65 455654332 24678888887764
No 214
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=83.00 E-value=0.73 Score=41.53 Aligned_cols=15 Identities=33% Similarity=0.485 Sum_probs=13.0
Q ss_pred CEEEEEecCcccCCC
Q 018797 73 KIAVFLNYDGTLSPI 87 (350)
Q Consensus 73 ~~lif~D~DGTLl~~ 87 (350)
.+.++||+||||++.
T Consensus 4 ~~~iiFDlDGTL~Ds 18 (220)
T COG0546 4 IKAILFDLDGTLVDS 18 (220)
T ss_pred CCEEEEeCCCccccC
Confidence 567999999999993
No 215
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=82.57 E-value=1.2 Score=41.38 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=13.7
Q ss_pred CCEEEEEecCcccCCC
Q 018797 72 KKIAVFLNYDGTLSPI 87 (350)
Q Consensus 72 k~~lif~D~DGTLl~~ 87 (350)
+.++|+||+||||++.
T Consensus 3 ~~k~vIFDlDGTLiDs 18 (267)
T PRK13478 3 KIQAVIFDWAGTTVDF 18 (267)
T ss_pred ceEEEEEcCCCCeecC
Confidence 3578999999999994
No 216
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=82.35 E-value=1.4 Score=39.42 Aligned_cols=41 Identities=5% Similarity=0.056 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEE
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPII 302 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Va 302 (350)
-+.......++.+|++++ .+++|||+.+|+.+=+.+ |+.++
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~i 183 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA-----GMEVF 183 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC-----CCEEE
Confidence 457889999999999876 999999999998877777 76654
No 217
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=82.32 E-value=5.7 Score=37.38 Aligned_cols=55 Identities=20% Similarity=0.153 Sum_probs=41.4
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCC-CHHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFM-SDEMRAAVREVAKYF-PTAIISGRSREKVMGFV 128 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~i-s~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~ 128 (350)
...-+|++|+|.||..... ..++ .+...+.|.+|.+.+ .+++=|--+.+-+..-+
T Consensus 120 ~~phVIVfDlD~TLItd~~---~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl 176 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEG---DVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSL 176 (297)
T ss_pred CCCcEEEEECCCcccccCC---ccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH
Confidence 5778999999999998532 2333 578899999999996 56777766777666544
No 218
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=82.29 E-value=0.56 Score=42.47 Aligned_cols=28 Identities=32% Similarity=0.376 Sum_probs=20.0
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+.|+||+||||++.. +...++++.+.+.
T Consensus 13 k~viFD~DGTL~Ds~---------~~~~~a~~~~~~~ 40 (229)
T PRK13226 13 RAVLFDLDGTLLDSA---------PDMLATVNAMLAA 40 (229)
T ss_pred CEEEEcCcCccccCH---------HHHHHHHHHHHHH
Confidence 578999999999931 3356666666655
No 219
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=82.20 E-value=0.54 Score=41.57 Aligned_cols=25 Identities=28% Similarity=0.312 Sum_probs=17.2
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAK 109 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~ 109 (350)
|+||+||||++. .+-..++++++.+
T Consensus 1 iiFDlDGTL~Ds---------~~~~~~~~~~~~~ 25 (205)
T TIGR01454 1 VVFDLDGVLVDS---------FAVMREAFAIAYR 25 (205)
T ss_pred CeecCcCccccC---------HHHHHHHHHHHHH
Confidence 579999999993 1345666666644
No 220
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=82.01 E-value=0.9 Score=40.60 Aligned_cols=30 Identities=27% Similarity=0.154 Sum_probs=20.0
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+.++++||+||||++.. +-..+++.++.+.
T Consensus 3 ~~~~viFD~DGTL~d~~---------~~~~~a~~~~~~~ 32 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSE---------VICSRAYVTMFAE 32 (221)
T ss_pred CCCEEEECCCCCCCCCh---------HHHHHHHHHHHHH
Confidence 35689999999999831 2234556665544
No 221
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=81.92 E-value=2.9 Score=37.14 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=29.7
Q ss_pred CCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHh---hhccc
Q 018797 94 VFMSDEMRAAVREVAKY-FPTAIISGRSREKVMG---FVELC 131 (350)
Q Consensus 94 ~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~---~~~l~ 131 (350)
.++++..++.+.+|++. .+++++||--+.-+.. .+++|
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence 46788899999999998 5899999987765544 45554
No 222
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=81.91 E-value=1.3 Score=39.73 Aligned_cols=15 Identities=40% Similarity=0.696 Sum_probs=13.4
Q ss_pred CCEEEEEecCcccCC
Q 018797 72 KKIAVFLNYDGTLSP 86 (350)
Q Consensus 72 k~~lif~D~DGTLl~ 86 (350)
-+++.+||+||||+.
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 567889999999998
No 223
>PRK10444 UMP phosphatase; Provisional
Probab=81.71 E-value=4.2 Score=37.51 Aligned_cols=61 Identities=18% Similarity=0.175 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCCC--------CccceEEeCCHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTPK--------ETKASYSLNDPSEV 322 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~~--------~t~A~y~l~~~~eV 322 (350)
-+...++.+++.++++.+ .+++|||+. +|+.+=+.+ |+ +|.|..+.- +..++|++.+..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~-----G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHc-----CCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 456778889999998877 999999996 899887777 54 566654421 12467888776554
No 224
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.69 E-value=1.9 Score=40.40 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCC-CCCHHHHHHHHhCCCce-EEEEcCC
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDD-RTDEDAFKVIKGRGQGY-PIIVSST 306 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~-~ND~~Mf~~~~~~~~g~-~Vav~na 306 (350)
...++.+++++|++.+ ++++|||+ .+|+.+=+.+ |+ +|.|..+
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~~G 249 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVLSG 249 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEECCC
Confidence 4567888899999877 99999999 5999876666 64 4566543
No 225
>PRK09449 dUMP phosphatase; Provisional
Probab=81.68 E-value=1.3 Score=39.58 Aligned_cols=14 Identities=21% Similarity=0.100 Sum_probs=12.5
Q ss_pred CEEEEEecCcccCC
Q 018797 73 KIAVFLNYDGTLSP 86 (350)
Q Consensus 73 ~~lif~D~DGTLl~ 86 (350)
.+.|+||+||||++
T Consensus 3 ~k~iiFDlDGTLid 16 (224)
T PRK09449 3 YDWILFDADETLFH 16 (224)
T ss_pred ccEEEEcCCCchhc
Confidence 46799999999997
No 226
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=81.65 E-value=1.6 Score=40.59 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=21.5
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
.-..++|+||+||||++. . ..-..++++++.+.
T Consensus 21 ~~~~k~vIFDlDGTLvDS-----~---~~~~~~a~~~~~~~ 53 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVED-----D---SELERKAWRALAEE 53 (260)
T ss_pred cCCceEEEEeCCCceeCC-----c---hHHHHHHHHHHHHH
Confidence 345688999999999982 1 11224566666655
No 227
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=81.51 E-value=0.64 Score=38.90 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.+...+.++++++|++. .+++|||+.+|+.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHHc
Confidence 35788999999999863 799999999998765544
No 228
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=81.33 E-value=2.4 Score=38.87 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHHh--c-CCEEEEcCCChhhHHhhh
Q 018797 95 FMSDEMRAAVREVAK--Y-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 95 ~is~~~~~aL~~L~~--~-~~v~I~SGR~~~~v~~~~ 128 (350)
.+.+.|.++|+.+++ . ..++|+|--.--.+..++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL 107 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL 107 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH
Confidence 345667777777754 2 467777777776666666
No 229
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=81.10 E-value=1.4 Score=36.98 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-|...++.+++.+|++.+ ++++|||+..|+.+=+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 467788999999999877 999999998887766665
No 230
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=79.77 E-value=3.8 Score=43.94 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=30.3
Q ss_pred ceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC---CccceEEeC
Q 018797 275 LPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK---ETKASYSLN 317 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~---~t~A~y~l~ 317 (350)
-+.+.||+.||-++|+.+ ..|||||=+.- +..|+.+|-
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmILL 747 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILL 747 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEEe
Confidence 567889999999999999 79999975532 357888753
No 231
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=79.74 E-value=1.6 Score=37.51 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=20.3
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF 111 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~ 111 (350)
+++||+||||++. .+....+++++.+..
T Consensus 1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~~ 28 (185)
T TIGR01990 1 AVIFDLDGVITDT---------AEYHYLAWKALADEL 28 (185)
T ss_pred CeEEcCCCccccC---------hHHHHHHHHHHHHHc
Confidence 4789999999983 235667777776653
No 232
>PLN02811 hydrolase
Probab=79.70 E-value=2.9 Score=37.46 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcC---CCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC----CccceEEeCCHHH
Q 018797 255 KGHALEYLLDTLG---LSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK----ETKASYSLNDPSE 321 (350)
Q Consensus 255 KG~Al~~Ll~~lg---i~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~----~t~A~y~l~~~~e 321 (350)
+-......++.++ +..+ ++++|||+..|+.+=+.+ |+ .|.|..... ...+++++.+..+
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNA-----GMSVVMVPDPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHC-----CCeEEEEeCCCCcHhhhhchhhHhcCHhh
Confidence 4557788888886 8766 999999999998887777 65 445544321 1235555555543
No 233
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=79.64 E-value=0.72 Score=40.79 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=17.5
Q ss_pred EEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 76 VFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 76 if~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
|+||+||||++. .+...++++.+.+.
T Consensus 1 viFD~DGTL~Ds---------~~~~~~~~~~~~~~ 26 (213)
T TIGR01449 1 VLFDLDGTLVDS---------APDIAAAVNMALAA 26 (213)
T ss_pred CeecCCCccccC---------HHHHHHHHHHHHHH
Confidence 579999999982 12345566666554
No 234
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=79.34 E-value=5.7 Score=35.29 Aligned_cols=64 Identities=25% Similarity=0.479 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCCCC-----ccceEEeCCHHHHHHHHHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTPKE-----TKASYSLNDPSEVLTFLLR 328 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~~~-----t~A~y~l~~~~eV~~~L~~ 328 (350)
..=+++++.+|++++ ++++|||+. ||+..-+.+ |+ +|.+...... ....+.+.+-.++.+.+..
T Consensus 158 ~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 158 EIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred HHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 556788999999877 999999977 775655655 65 4444433211 3577778777777776653
No 235
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=78.41 E-value=5.2 Score=36.37 Aligned_cols=17 Identities=24% Similarity=0.200 Sum_probs=14.2
Q ss_pred cCCEEEEEecCcccCCC
Q 018797 71 EKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~ 87 (350)
++.++|+||+||||++.
T Consensus 8 ~~~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 8 GRISALTFDLDDTLYDN 24 (238)
T ss_pred CCceeEEEcCcccccCC
Confidence 34578999999999993
No 236
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=77.96 E-value=2.2 Score=36.63 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=19.8
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
++|+||+||||++.. +...++++++.+.
T Consensus 2 ~~iiFD~DGTL~ds~---------~~~~~~~~~~~~~ 29 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA---------PLHAQAWKHLADK 29 (185)
T ss_pred CeEEEcCCCcccCCh---------HHHHHHHHHHHHH
Confidence 578999999999931 3455666666554
No 237
>PF11798 IMS_HHH: IMS family HHH motif; InterPro: IPR024728 This helix-hairpin-helix motif is found in proteins belonging to the type-Y family of DNA polymerases []. This type of polymerases are thought to be involved in UV protection and mutation [, ]. ; PDB: 3PZP_B 2OH2_B 2W7O_B 3IN5_B 1T94_A 2W7P_B 2W8K_A 2AGQ_A 1RYR_A 3RAX_A ....
Probab=77.37 E-value=0.86 Score=28.13 Aligned_cols=9 Identities=44% Similarity=1.328 Sum_probs=7.2
Q ss_pred hhhhhhccC
Q 018797 341 QLAQIWGIG 349 (350)
Q Consensus 341 ~~~~~~~~~ 349 (350)
++..+||||
T Consensus 12 pi~~~~GIG 20 (32)
T PF11798_consen 12 PIRKFWGIG 20 (32)
T ss_dssp BGGGSTTS-
T ss_pred CHHhhCCcc
Confidence 788999998
No 238
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=77.37 E-value=3.2 Score=36.52 Aligned_cols=36 Identities=14% Similarity=0.300 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-+....+.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 142 P~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CCHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 346778889999999887 999999999886655555
No 239
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=77.36 E-value=1.3 Score=38.88 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
....+.+++.+|++++ .+++|||+.+|+.+-+.+
T Consensus 151 ~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~ 184 (198)
T TIGR01428 151 PQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF 184 (198)
T ss_pred HHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC
Confidence 5678899999999877 999999999998887777
No 240
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=77.06 E-value=1.2 Score=44.80 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=19.3
Q ss_pred EEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHH
Q 018797 74 IAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREV 107 (350)
Q Consensus 74 ~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L 107 (350)
+.++||+||||++. ...+.....++++++
T Consensus 242 k~vIFDlDGTLiDs-----~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 242 QALIFDMDGTLFQT-----DKILELSLDDTFDHL 270 (459)
T ss_pred hheeEccCCceecc-----hhHHHHHHHHHHHHH
Confidence 67999999999993 223344445555554
No 241
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=76.51 E-value=6.6 Score=34.48 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=51.3
Q ss_pred HHhhCCCCCCcHHHHHHHhcc-CCEEEEEecCcccCCCCCC---------C-------------------CCCCCCHHHH
Q 018797 51 WMMEHPSALGSFDKMMKAAKE-KKIAVFLNYDGTLSPIVDD---------P-------------------DRVFMSDEMR 101 (350)
Q Consensus 51 ~~~~~~~al~~f~~~~~~~~~-k~~lif~D~DGTLl~~~~~---------p-------------------~~~~is~~~~ 101 (350)
...+.|--+-+-.+|...+.+ +.+.|-||+|.|++-...- | +.-.|+.+..
T Consensus 40 l~~qa~ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA 119 (237)
T COG3700 40 LAEQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVA 119 (237)
T ss_pred HhhhCCeeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHH
Confidence 445677777888899888875 5688889999999842110 1 1224555544
Q ss_pred HHHHHH-HhcC-CEEEEcCCChhhHHhhh
Q 018797 102 AAVREV-AKYF-PTAIISGRSREKVMGFV 128 (350)
Q Consensus 102 ~aL~~L-~~~~-~v~I~SGR~~~~v~~~~ 128 (350)
..|-.+ ++++ .++.+|||+..++...-
T Consensus 120 ~qLI~MHq~RGD~i~FvTGRt~gk~d~vs 148 (237)
T COG3700 120 RQLIDMHQRRGDAIYFVTGRTPGKTDTVS 148 (237)
T ss_pred HHHHHHHHhcCCeEEEEecCCCCcccccc
Confidence 433334 4455 79999999998766543
No 242
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=76.28 E-value=2.3 Score=38.50 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=51.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC----------CCC-
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTL---GLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS----------TPK- 308 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~l---gi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n----------a~~- 308 (350)
..-...|+ +.-||..+..+.... |+..+ .++|+||+.||.=-...+++ --|+|.- +.+
T Consensus 153 hsC~~CPs-NmCKg~Vl~~~~~s~~~~gv~ye---r~iYvGDG~nD~CP~l~Lr~----~D~ampRkgfpl~k~~~~~p~ 224 (256)
T KOG3120|consen 153 HSCNLCPS-NMCKGLVLDELVASQLKDGVRYE---RLIYVGDGANDFCPVLRLRA----CDVAMPRKGFPLWKLISANPM 224 (256)
T ss_pred CccCcCch-hhhhhHHHHHHHHHHhhcCCcee---eEEEEcCCCCCcCcchhccc----CceecccCCCchHhhhhcCcc
Confidence 34455898 999999999998765 44443 89999999999855444432 2233321 111
Q ss_pred CccceEEe-CCHHHHHHHHHHHHhc
Q 018797 309 ETKASYSL-NDPSEVLTFLLRLSRW 332 (350)
Q Consensus 309 ~t~A~y~l-~~~~eV~~~L~~l~~~ 332 (350)
.-.|+-+. .+-.++.+.|..++..
T Consensus 225 ~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 225 LLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred eeeeeEEecccHHHHHHHHHHHHHH
Confidence 12344433 4667777777777653
No 243
>PRK08238 hypothetical protein; Validated
Probab=76.12 E-value=2.4 Score=43.15 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCC
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTP 307 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~ 307 (350)
-.|... +.+.++.. ..+++||+.+|++|++.+ |.+|+|...+
T Consensus 127 ~~K~~~---l~~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 127 AAKAAA---LVEAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred chHHHH---HHHHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 346544 44666532 568899999999999999 7899987654
No 244
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=75.29 E-value=3.7 Score=35.41 Aligned_cols=45 Identities=24% Similarity=0.242 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCC
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSST 306 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na 306 (350)
-+...+..+++.++++.+ ++++|||+. +|+.+=+.+ |+ +|.+..+
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~g 138 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEPL 138 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEccC
Confidence 457789999999999877 999999998 798776666 64 5556444
No 245
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=74.91 E-value=4.6 Score=37.14 Aligned_cols=35 Identities=34% Similarity=0.229 Sum_probs=27.9
Q ss_pred hhCCCCCCcHHHHHHHhccCCEEEEEecCcccCCC
Q 018797 53 MEHPSALGSFDKMMKAAKEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 53 ~~~~~al~~f~~~~~~~~~k~~lif~D~DGTLl~~ 87 (350)
..+-+|=..|+...+..++|+++|++|+|-|.++.
T Consensus 59 Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 59 QAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred HHhhhHHHHHHhhhccccCCCceEEEecchHhhcC
Confidence 34666667777666667789999999999999984
No 246
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.81 E-value=8.5 Score=38.86 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=46.6
Q ss_pred HHHHHhc-cCCEEEEEecCcccCCCCCCC---CCCCC--------CHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc-
Q 018797 64 KMMKAAK-EKKIAVFLNYDGTLSPIVDDP---DRVFM--------SDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE- 129 (350)
Q Consensus 64 ~~~~~~~-~k~~lif~D~DGTLl~~~~~p---~~~~i--------s~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~- 129 (350)
.++++.. ..++.+++|+|+||..-+-.. +.-.+ -.+..+-|..|.+. +-++|||=.....+++.+.
T Consensus 212 Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k 291 (574)
T COG3882 212 SLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK 291 (574)
T ss_pred HHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhh
Confidence 3344333 567999999999999732111 11122 24567778888888 4789999999999998775
Q ss_pred ccC
Q 018797 130 LCN 132 (350)
Q Consensus 130 l~~ 132 (350)
.|+
T Consensus 292 hp~ 294 (574)
T COG3882 292 HPD 294 (574)
T ss_pred CCC
Confidence 344
No 247
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=74.73 E-value=2.6 Score=35.22 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=31.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.+..+.+.+++.+|++++ .+++|||+..|+.+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999877 999999999998887777
No 248
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=74.32 E-value=4.2 Score=38.86 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=34.0
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-----CCEEEEc
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-----FPTAIIS 117 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-----~~v~I~S 117 (350)
..+..-++||+||.|+- ...+-++..+|++.|.++ +|+++.|
T Consensus 32 s~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 35778999999999998 356677899999999876 3666666
No 249
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=73.93 E-value=13 Score=34.47 Aligned_cols=34 Identities=29% Similarity=0.544 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDA 288 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~M 288 (350)
|.+||.++..+++..|..++ .+|+|-|+.-.+.-
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~s 193 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKS 193 (252)
T ss_pred CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHH
Confidence 89999999999999999877 99999998754443
No 250
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=73.80 E-value=4.2 Score=33.30 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHcC--CCCCCCcceEEEeCCCCCHHHHH
Q 018797 254 DKGHALEYLLDTLG--LSNPNDVLPLYIGDDRTDEDAFK 290 (350)
Q Consensus 254 ~KG~Al~~Ll~~lg--i~~~~~~~vi~~GD~~ND~~Mf~ 290 (350)
.|...+..+++++| ++++ ++++|||+..|++-++
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHH
Confidence 57889999999999 8877 9999999999876555
No 251
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=73.76 E-value=1.9 Score=38.21 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
....+.+++.+|++++ .+++|||...|+.+=+.+
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence 4578888999999877 999999999998877777
No 252
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=73.39 E-value=8.4 Score=36.82 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.|...+..+++.+|+..+ .+++|||+..|+.+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999999877 999999999998887775
No 253
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=72.65 E-value=2 Score=37.06 Aligned_cols=11 Identities=45% Similarity=0.978 Sum_probs=10.2
Q ss_pred EEEecCcccCC
Q 018797 76 VFLNYDGTLSP 86 (350)
Q Consensus 76 if~D~DGTLl~ 86 (350)
+++|+||||+.
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
Confidence 68999999998
No 254
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=71.76 E-value=4.3 Score=36.75 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=47.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCC-CCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCCCccceEEeCCHH
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLS-NPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPKETKASYSLNDPS 320 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~~t~A~y~l~~~~ 320 (350)
+-+=+.|. -.|-++.++..|+. +. .+++|-||.+-+..=+.+ |+ +|.|+.......++|.+.+.-
T Consensus 155 ~~~vcKP~-----~~afE~a~k~agi~~p~---~t~FfDDS~~NI~~ak~v-----Gl~tvlv~~~~~~~~~d~~l~~ih 221 (244)
T KOG3109|consen 155 KTVVCKPS-----EEAFEKAMKVAGIDSPR---NTYFFDDSERNIQTAKEV-----GLKTVLVGREHKIKGVDYALEQIH 221 (244)
T ss_pred CceeecCC-----HHHHHHHHHHhCCCCcC---ceEEEcCchhhHHHHHhc-----cceeEEEEeeecccchHHHHHHhh
Confidence 34446666 36788999999998 44 999999999887655555 54 566765554445666655433
Q ss_pred HHHHHHHHH
Q 018797 321 EVLTFLLRL 329 (350)
Q Consensus 321 eV~~~L~~l 329 (350)
...+.+-.|
T Consensus 222 ~~k~a~p~l 230 (244)
T KOG3109|consen 222 NNKEALPEL 230 (244)
T ss_pred chhhhchHH
Confidence 333333333
No 255
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=71.68 E-value=4.5 Score=35.32 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeC---CCCCHHHHHHHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGD---DRTDEDAFKVIK 293 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD---~~ND~~Mf~~~~ 293 (350)
..++.+++.+|+... .+.+++.++ ..-|-++|..+-
T Consensus 120 ~~~~~~l~~~gl~~~-fd~i~~s~~~~~~KP~~~~~~~~~ 158 (198)
T TIGR01428 120 AMLKSLVKHAGLDDP-FDAVLSADAVRAYKPAPQVYQLAL 158 (198)
T ss_pred HHHHHHHHHCCChhh-hheeEehhhcCCCCCCHHHHHHHH
Confidence 345677888888532 223443332 235778877764
No 256
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=71.41 E-value=4.6 Score=34.80 Aligned_cols=30 Identities=27% Similarity=0.336 Sum_probs=21.0
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+.++|+||+||||++. .+...++++++.+.
T Consensus 4 ~~~~viFD~DGTLiDs---------~~~~~~a~~~~~~~ 33 (188)
T PRK10725 4 RYAGLIFDMDGTILDT---------EPTHRKAWREVLGR 33 (188)
T ss_pred cceEEEEcCCCcCccC---------HHHHHHHHHHHHHH
Confidence 4578999999999983 12356666666554
No 257
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=70.89 E-value=9.2 Score=33.70 Aligned_cols=13 Identities=38% Similarity=0.774 Sum_probs=12.0
Q ss_pred EEEEEecCcccCC
Q 018797 74 IAVFLNYDGTLSP 86 (350)
Q Consensus 74 ~lif~D~DGTLl~ 86 (350)
+.|+||+||||++
T Consensus 3 k~viFDldGtL~d 15 (211)
T TIGR02247 3 KAVIFDFGGVLLP 15 (211)
T ss_pred eEEEEecCCceec
Confidence 5799999999998
No 258
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=70.74 E-value=1.7 Score=37.11 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 256 GHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 256 G~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
....+.+++.+|++++ .+++|||+..|+.+=+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 5678899999999877 999999999998877776
No 259
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=70.04 E-value=5.1 Score=40.92 Aligned_cols=41 Identities=27% Similarity=0.276 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcC
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSS 305 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~n 305 (350)
-.|-.+++ +.+|.+.. . ++.||+.+|.+||+.+ +.+++|..
T Consensus 175 e~Kv~rl~---~~~g~~~~---~-~aYgDS~sD~plL~~a-----~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVL---KEFGDALP---D-LGLGDRETDHDFMSIC-----KEGYMVPR 215 (497)
T ss_pred HHHHHHHH---HHhCCCCc---e-EEEECCccHHHHHHhC-----CccEEeCC
Confidence 34666665 55664432 3 8999999999999999 67888876
No 260
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=69.86 E-value=7 Score=33.21 Aligned_cols=11 Identities=27% Similarity=0.694 Sum_probs=10.4
Q ss_pred EEEecCcccCC
Q 018797 76 VFLNYDGTLSP 86 (350)
Q Consensus 76 if~D~DGTLl~ 86 (350)
++||+||||++
T Consensus 2 vlFDlDgtLv~ 12 (183)
T TIGR01509 2 ILFDLDGVLVD 12 (183)
T ss_pred eeeccCCceec
Confidence 78999999999
No 261
>PHA02597 30.2 hypothetical protein; Provisional
Probab=69.51 E-value=7 Score=34.11 Aligned_cols=15 Identities=27% Similarity=0.399 Sum_probs=12.8
Q ss_pred CEEEEEecCcccCCC
Q 018797 73 KIAVFLNYDGTLSPI 87 (350)
Q Consensus 73 ~~lif~D~DGTLl~~ 87 (350)
.++|+||+||||+++
T Consensus 2 ~k~viFDlDGTLiD~ 16 (197)
T PHA02597 2 KPTILTDVDGVLLSW 16 (197)
T ss_pred CcEEEEecCCceEch
Confidence 367999999999994
No 262
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=68.46 E-value=5.1 Score=33.32 Aligned_cols=27 Identities=33% Similarity=0.413 Sum_probs=18.9
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+|+||+||||++. .+....+++++.+.
T Consensus 1 ~iifD~DGTL~d~---------~~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVDS---------SFAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCccccc---------HHHHHHHHHHHHHH
Confidence 3789999999993 13456666666655
No 263
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=68.31 E-value=3.2 Score=36.94 Aligned_cols=36 Identities=22% Similarity=0.107 Sum_probs=23.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEEeCCC---CCHHHHHHHHh
Q 018797 258 ALEYLLDTLGLSNPNDVLPLYIGDDR---TDEDAFKVIKG 294 (350)
Q Consensus 258 Al~~Ll~~lgi~~~~~~~vi~~GD~~---ND~~Mf~~~~~ 294 (350)
..+..++.+|+... ++.++..++-. =|-.+|+.+-+
T Consensus 127 ~~~~~l~~~gl~~~-Fd~v~~s~~~g~~KP~~~~f~~~~~ 165 (229)
T COG1011 127 HQERKLRQLGLLDY-FDAVFISEDVGVAKPDPEIFEYALE 165 (229)
T ss_pred HHHHHHHHcCChhh-hheEEEecccccCCCCcHHHHHHHH
Confidence 34566777886532 45666666633 48999998865
No 264
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=68.07 E-value=3 Score=36.48 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeC--CCCCHHHHHHHHhCC-C-ceEEEEcCC
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGD--DRTDEDAFKVIKGRG-Q-GYPIIVSST 306 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD--~~ND~~Mf~~~~~~~-~-g~~Vav~na 306 (350)
+.-..+..+++.+|+.. ..++.+. ...+..+++.++.++ + +-.+.||.+
T Consensus 152 D~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 152 DNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp SEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred ccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 34455578888999962 3444444 556654455665544 2 334445554
No 265
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=66.88 E-value=10 Score=33.07 Aligned_cols=23 Identities=13% Similarity=0.046 Sum_probs=19.0
Q ss_pred CCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 267 GLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 267 gi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
|++.+ .+++|||+..|+..-+.+
T Consensus 127 gl~p~---e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 127 VLKPA---QILFFDDRTDNVREVWGY 149 (174)
T ss_pred CCCHH---HeEEEcChhHhHHHHHHh
Confidence 57766 999999999998876655
No 266
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=66.09 E-value=4.9 Score=35.18 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=18.8
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+|+||+||||++.. +...++++++.+.
T Consensus 2 ~viFD~DGTLiDs~---------~~~~~a~~~~~~~ 28 (197)
T TIGR01548 2 ALVLDMDGVMADVS---------QSYRRAIIDTVEH 28 (197)
T ss_pred ceEEecCceEEech---------HHHHHHHHHHHHH
Confidence 47999999999931 2356666666554
No 267
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=65.65 E-value=7.7 Score=33.45 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=22.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCC-------CCCHHHHHHHHh
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDD-------RTDEDAFKVIKG 294 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~-------~ND~~Mf~~~~~ 294 (350)
..+..+++.+|+... .+.+++..|- .-|-++|..+-+
T Consensus 109 ~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 109 AHARRALNRLGIEDC-FDGIFCFDTANPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred HHHHHHHHHcCcHhh-hCeEEEeecccCccCCCCCCHHHHHHHHH
Confidence 356777888888632 3355555443 337777776643
No 268
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=65.32 E-value=7.6 Score=33.97 Aligned_cols=14 Identities=21% Similarity=0.259 Sum_probs=12.1
Q ss_pred EEEEEecCcccCCC
Q 018797 74 IAVFLNYDGTLSPI 87 (350)
Q Consensus 74 ~lif~D~DGTLl~~ 87 (350)
++|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 36899999999994
No 269
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=65.31 E-value=6.3 Score=42.97 Aligned_cols=63 Identities=24% Similarity=0.266 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeC--CHHHHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKETKASYSLN--DPSEVLTFLLR 328 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~--~~~eV~~~L~~ 328 (350)
.|..-++. ++++|. .+-..||+.||=.+|+++ ..||.-+.+....+|.|.-. +-..|.+.|++
T Consensus 840 qK~~Lie~-lQkl~y------~VgfCGDGANDCgALKaA-----dvGISLSeaEASvAApFTSk~~~I~cVp~vIrE 904 (1140)
T KOG0208|consen 840 QKAELIEA-LQKLGY------KVGFCGDGANDCGALKAA-----DVGISLSEAEASVAAPFTSKTPSISCVPDVIRE 904 (1140)
T ss_pred hHHHHHHH-HHhcCc------EEEecCCCcchhhhhhhc-----ccCcchhhhhHhhcCccccCCCchhhHhHHHhh
Confidence 66655544 555664 788999999999999999 67888887655557777654 55667766654
No 270
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=65.13 E-value=13 Score=36.34 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
--|-..+..+++.+++..+ .+++|||+.+|+.+=+.+
T Consensus 104 KP~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a 140 (354)
T PRK05446 104 KPKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM 140 (354)
T ss_pred CCCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence 3456688888899998877 999999999998877766
No 271
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=64.28 E-value=8 Score=35.54 Aligned_cols=43 Identities=23% Similarity=0.396 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCCC
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSSTP 307 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na~ 307 (350)
.-=++.++++++.++ +++.|||+. ||...=+.+ |+ ++.|.|..
T Consensus 172 ~If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~-----G~~ailv~~~~ 216 (237)
T KOG3085|consen 172 RIFQLALERLGVKPE---ECVHIGDLLENDYEGARNL-----GWHAILVDNSI 216 (237)
T ss_pred HHHHHHHHHhCCChH---HeEEecCccccccHhHHHc-----CCEEEEEcccc
Confidence 345677889999987 999999976 998766666 64 78888753
No 272
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=63.73 E-value=21 Score=34.08 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=34.0
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-----CCEEEEc---CCChhhHHh
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-----FPTAIIS---GRSREKVMG 126 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-----~~v~I~S---GR~~~~v~~ 126 (350)
.++||+||||... ..+-+...++|+.|.+. .++.++| |++...+.+
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 5899999999982 34578899999999874 3666665 666665443
No 273
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=63.59 E-value=4.1 Score=35.79 Aligned_cols=13 Identities=8% Similarity=0.220 Sum_probs=11.8
Q ss_pred EEEEecCcccCCC
Q 018797 75 AVFLNYDGTLSPI 87 (350)
Q Consensus 75 lif~D~DGTLl~~ 87 (350)
+|+||+||||++.
T Consensus 2 ~viFDldgvL~d~ 14 (199)
T PRK09456 2 LYIFDLGNVIVDI 14 (199)
T ss_pred EEEEeCCCccccC
Confidence 6899999999984
No 274
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=63.13 E-value=17 Score=33.15 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=15.8
Q ss_pred ccCCEEEEEecCcccCCC
Q 018797 70 KEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~ 87 (350)
.+.++|++||+|-|+++-
T Consensus 10 ~~~ril~~FDFD~TIid~ 27 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQ 27 (256)
T ss_pred cCCcEEEEEecCceeecC
Confidence 468999999999999974
No 275
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.95 E-value=4.8 Score=29.04 Aligned_cols=28 Identities=21% Similarity=0.479 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHH
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKV 291 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~ 291 (350)
.-|+.|++.+| .+++|||-.-|++|++.
T Consensus 5 YDVqQlLK~~G-------~ivyfg~r~~~iemm~~ 32 (68)
T COG4483 5 YDVQQLLKKFG-------IIVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHHCC-------eeeecCCHHHHHHHHHH
Confidence 34788999998 78999999999999875
No 276
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=62.13 E-value=4.5 Score=35.46 Aligned_cols=14 Identities=21% Similarity=0.491 Sum_probs=10.4
Q ss_pred CEE-EEEecCcccCC
Q 018797 73 KIA-VFLNYDGTLSP 86 (350)
Q Consensus 73 ~~l-if~D~DGTLl~ 86 (350)
|++ |++|+||||.+
T Consensus 1 ~~i~I~iDiDgVLad 15 (191)
T PF06941_consen 1 RKIRIAIDIDGVLAD 15 (191)
T ss_dssp --EEEEEESBTTTB-
T ss_pred CCcEEEEECCCCCcc
Confidence 356 99999999998
No 277
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=61.69 E-value=16 Score=33.22 Aligned_cols=45 Identities=20% Similarity=0.363 Sum_probs=32.4
Q ss_pred EEcCCCC-CHHHHHHHHHHHcCCCCCCCcceEEEeCCCC--CHHHHHHHHhC
Q 018797 247 IRPSIEW-DKGHALEYLLDTLGLSNPNDVLPLYIGDDRT--DEDAFKVIKGR 295 (350)
Q Consensus 247 I~p~~~~-~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N--D~~Mf~~~~~~ 295 (350)
..|. ++ ..-.||++|-+++.-.. +-++||+|+.| |++.|+.++..
T Consensus 72 ~~~r-g~~qRn~AL~~ir~~~~~~~---~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 72 LKPR-GVEQRNLALRWIREHLSAKL---DGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred CCcc-cHHHHHHHHHHHHhccccCc---ceEEEEccCCCcccHHHHHHHhcc
Confidence 3455 33 44578888888764222 28999999988 88999999864
No 278
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=61.29 E-value=8.2 Score=34.97 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
.+......+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 456678899999999877 999999999998876666
No 279
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=59.12 E-value=6.1 Score=34.89 Aligned_cols=15 Identities=40% Similarity=0.778 Sum_probs=13.1
Q ss_pred CCEEEEEecCcccCC
Q 018797 72 KKIAVFLNYDGTLSP 86 (350)
Q Consensus 72 k~~lif~D~DGTLl~ 86 (350)
++.++|+|+|||++-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 577899999999985
No 280
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=59.08 E-value=4.8 Score=33.80 Aligned_cols=31 Identities=16% Similarity=-0.051 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 259 LEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 259 l~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
..+.++.+|.+.+ .+++|||+.+|..+.+..
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~n 134 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPEN 134 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCccC
Confidence 5566788898877 999999999998865444
No 281
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=58.25 E-value=14 Score=33.69 Aligned_cols=56 Identities=25% Similarity=0.353 Sum_probs=42.9
Q ss_pred CEEEEEecCcccC-CCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 73 KIAVFLNYDGTLS-PIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 73 ~~lif~D~DGTLl-~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+.++.+=||||=. ....+|+..++..+..+||.++.....-++.+||+=..|-..-
T Consensus 2 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~ 58 (227)
T TIGR00071 2 KIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAMG 58 (227)
T ss_pred eEEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCccccc
Confidence 4678889999955 5566777778889999999998765445788999887776643
No 282
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.22 E-value=9 Score=32.56 Aligned_cols=27 Identities=26% Similarity=0.357 Sum_probs=18.0
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
+|+||+||||++.. +...++++.+.+.
T Consensus 1 ~viFD~DGTL~D~~---------~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVH---------GGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccH---------HHHHHHHHHhhhh
Confidence 47899999999831 2355566655433
No 283
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=57.31 E-value=34 Score=32.30 Aligned_cols=24 Identities=17% Similarity=0.201 Sum_probs=18.0
Q ss_pred hccCCEEEEEecCcccCCCCCCCC
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPD 92 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~ 92 (350)
..+...++++|.||-+.....+|+
T Consensus 191 l~Ad~Li~lTDVdGVy~~dP~~~~ 214 (284)
T cd04256 191 LKADLLILLSDVDGLYDGPPGSDD 214 (284)
T ss_pred cCCCEEEEEeCCCeeecCCCCCCC
Confidence 457888899999999986433444
No 284
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=55.89 E-value=5.3 Score=44.69 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCce-EEEEcCCCC-----CccceEEeCCHHHH
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGY-PIIVSSTPK-----ETKASYSLNDPSEV 322 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~-~Vav~na~~-----~t~A~y~l~~~~eV 322 (350)
+......+++.+|++++ ++++|||+.+|+.+=+.+ |+ .|.+..+.. ...|++++.+..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 36778889999999877 999999999998777776 65 455654422 14688999998875
No 285
>PTZ00205 DNA polymerase kappa; Provisional
Probab=55.47 E-value=57 Score=33.96 Aligned_cols=102 Identities=20% Similarity=0.339 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcCCC-C-C--HH-HHHH----HHHHHcCCCCCCCcceEEEeCCCCC
Q 018797 217 EDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPSIE-W-D--KG-HALE----YLLDTLGLSNPNDVLPLYIGDDRTD 285 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~~~-~-~--KG-~Al~----~Ll~~lgi~~~~~~~vi~~GD~~ND 285 (350)
+.+..+-.++.+++..| |.+...+ ...|+|++.... . + .. ..++ .+.+.+|++ +.+|=+.|
T Consensus 204 ~~Y~~~S~~I~~il~~ysp~ve~~SIDEafLDlT~~~~~~~~~~~~~~iA~~IR~~I~~~tgLt-------~SiGIA~N- 275 (571)
T PTZ00205 204 DAYNEESNTVRRIVAEYDPNYISFGLDELTLEVSAYIERFEGTKTAEDVASELRVRVFGETKLT-------ASAGIGPT- 275 (571)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEeechhceeccCCchhhccCCCCHHHHHHHHHHHHHHHHCCc-------EEEEEcCC-
Confidence 44566777788888887 4555544 578999986410 0 0 01 1112 222334543 33333332
Q ss_pred HHHHHHHHhCCCceEEEEcCCCCCccceEEe--CCHHHHHHHHHHHHhcccCCCCchhhhhhhccC
Q 018797 286 EDAFKVIKGRGQGYPIIVSSTPKETKASYSL--NDPSEVLTFLLRLSRWRKSSSSSKQLAQIWGIG 349 (350)
Q Consensus 286 ~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l--~~~~eV~~~L~~l~~~~~~~~~~~~~~~~~~~~ 349 (350)
.+|..+. ++-.+ ....+++ .++.++.+||..| |+..|||||
T Consensus 276 -klLAKiA----------Sd~~K-PnG~~vl~l~~~~~v~~fL~~L-----------pV~ki~GIG 318 (571)
T PTZ00205 276 -AALAKIA----------SNINK-PNGQHDLNLHTRGDVMTYVRDL-----------GLRSVPGVG 318 (571)
T ss_pred -HHHHHHh----------hhccC-CCCCeEEecCCHHHHHHHHhCC-----------CcceeCCcC
Confidence 2333321 11111 2445555 4788899988766 889999998
No 286
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=55.25 E-value=17 Score=40.70 Aligned_cols=31 Identities=29% Similarity=0.321 Sum_probs=21.7
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY 110 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~ 110 (350)
++.+.|+||+||||++. .+...++++++.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS---------~~~~~~a~~~~~~~ 103 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNS---------EEPSRRAAVDVFAE 103 (1057)
T ss_pred CCCCEEEECCCCCeEeC---------hHHHHHHHHHHHHH
Confidence 35678999999999993 13445666666554
No 287
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=55.01 E-value=8.9 Score=41.21 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=24.3
Q ss_pred ceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC
Q 018797 275 LPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK 308 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~ 308 (350)
.++.+||+.||..+|+.+ ..|||.=|++.
T Consensus 808 ~TLMCGDGTNDVGALK~A-----hVGVALL~~~~ 836 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQA-----HVGVALLNNPE 836 (1160)
T ss_pred EEEEecCCCcchhhhhhc-----ccceehhcCCh
Confidence 689999999999999999 68888655443
No 288
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=54.75 E-value=13 Score=34.83 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHcCCC-CCCCcceEEEeCCCCCHHHHHHHHhCCCceEE
Q 018797 254 DKGHALEYLLDTLGLS-NPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPI 301 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~V 301 (350)
.+...+...++.++.+ .+ .+++|||+.+|+.+-+.+ |+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~~---~~~~vgD~~~d~~~a~~~-----Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYD---VLLAVDDRDQVVDMWRRI-----GLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCce---EEEEEcCcHHHHHHHHHh-----CCeE
Confidence 4455677777777773 34 899999999999999988 7653
No 289
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=54.24 E-value=49 Score=30.81 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=16.2
Q ss_pred HhccCCEEEEEecCcccCCC
Q 018797 68 AAKEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~ 87 (350)
..++...++++|.||-+...
T Consensus 166 ~l~Ad~liilTDVdGVy~~d 185 (266)
T PRK12314 166 LVKADLLIILSDIDGLYDKN 185 (266)
T ss_pred HhCCCEEEEEeCCCcccCCC
Confidence 34678889999999999763
No 290
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=52.72 E-value=20 Score=32.29 Aligned_cols=45 Identities=18% Similarity=0.280 Sum_probs=25.0
Q ss_pred EcCCCC-CHHHHHHHHHHHcCCCCCCCcceEEEeCCCC--CHHHHHHHHhCC
Q 018797 248 RPSIEW-DKGHALEYLLDTLGLSNPNDVLPLYIGDDRT--DEDAFKVIKGRG 296 (350)
Q Consensus 248 ~p~~~~-~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N--D~~Mf~~~~~~~ 296 (350)
.|. |+ ..-.||++|-....-. ..-++||+|+.| |+.+|+.++...
T Consensus 55 ~~r-g~~qRn~AL~~ir~~~~~~---~~GVVyFaDDdNtYdl~LF~emR~~k 102 (207)
T PF03360_consen 55 KPR-GVHQRNAALRWIRNNANHR---LDGVVYFADDDNTYDLRLFDEMRKTK 102 (207)
T ss_dssp --T-SHHHHHHHHHHHHSTTTSS---S-EEEEE--TTSEE-HHHHHHHCT-S
T ss_pred ccc-cHHHHHHHHHHHHhcccCC---CCcEEEECCCCCeeeHHHHHHHHhhh
Confidence 355 55 3445666665222222 238999999998 999999997643
No 291
>PTZ00489 glutamate 5-kinase; Provisional
Probab=52.68 E-value=54 Score=30.58 Aligned_cols=18 Identities=17% Similarity=0.318 Sum_probs=15.2
Q ss_pred hccCCEEEEEecCcccCC
Q 018797 69 AKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~ 86 (350)
..+...++++|.||-+..
T Consensus 160 l~Ad~LiilTDVdGVy~~ 177 (264)
T PTZ00489 160 FKADLLVILSDIDGYYTE 177 (264)
T ss_pred hCCCEEEEeeccCeeEcC
Confidence 457789999999999985
No 292
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=50.34 E-value=20 Score=29.96 Aligned_cols=62 Identities=23% Similarity=0.306 Sum_probs=39.9
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCCCh--hhHHhhhcccCceEeccCcceEeCCCCC
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISGRSR--EKVMGFVELCNVYYAGSHGMDILAPPRP 149 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~--~~v~~~~~l~~l~~i~~nGa~I~~~~~~ 149 (350)
+-++|+||.|+.-. +...++ .-+.|+.+.+.+ +++|+|--.. +.|+++-. +-|+.++.|...
T Consensus 45 iAildL~G~~l~l~---S~R~~~--~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~--------~f~A~ly~P~~d 109 (138)
T PF04312_consen 45 IAILDLDGELLDLK---SSRNMS--RSEVIEWISEYGKPVIVATDVSPPPETVKKIAR--------SFNAVLYTPERD 109 (138)
T ss_pred EEEEecCCcEEEEE---eecCCC--HHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHH--------HhCCcccCCCCc
Confidence 45699999999743 223444 466777888885 8999997543 44554432 235666777643
No 293
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=49.63 E-value=39 Score=25.42 Aligned_cols=81 Identities=12% Similarity=0.185 Sum_probs=42.5
Q ss_pred HhHHHhhCCCCCCcHHHHHHHhc-cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHh
Q 018797 48 YNSWMMEHPSALGSFDKMMKAAK-EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMG 126 (350)
Q Consensus 48 ~~~~~~~~~~al~~f~~~~~~~~-~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~ 126 (350)
+..|...++..+..+.++..... .+-.++++++|.. . .++..+.+.+.. .++.+.++... .+.+
T Consensus 27 ~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~~v~~d~~--~----------~~~~~~~~~~~~--~~~~~~~~~~~-~~~~ 91 (116)
T cd02966 27 WASWCPPCRAEMPELEALAKEYKDDGVEVVGVNVDDD--D----------PAAVKAFLKKYG--ITFPVLLDPDG-ELAK 91 (116)
T ss_pred ecccChhHHHHhHHHHHHHHHhCCCCeEEEEEECCCC--C----------HHHHHHHHHHcC--CCcceEEcCcc-hHHH
Confidence 34566666667777777765554 4557778887754 1 123444444433 34444455432 3333
Q ss_pred hh---cccCceEeccCcceE
Q 018797 127 FV---ELCNVYYAGSHGMDI 143 (350)
Q Consensus 127 ~~---~l~~l~~i~~nGa~I 143 (350)
.+ +.|.++++-.+|-.+
T Consensus 92 ~~~~~~~P~~~l~d~~g~v~ 111 (116)
T cd02966 92 AYGVRGLPTTFLIDRDGRIR 111 (116)
T ss_pred hcCcCccceEEEECCCCcEE
Confidence 33 345555555555444
No 294
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=49.45 E-value=31 Score=35.81 Aligned_cols=58 Identities=10% Similarity=0.266 Sum_probs=44.8
Q ss_pred cCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhcc
Q 018797 71 EKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVEL 130 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l 130 (350)
....+++++.||+++....- ...+-++..++|++|++. .+++|+||.+...+..+.+.
T Consensus 383 ~g~~~~~~~~~~~~~g~~~~--~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 383 QGSTSVLVAVNGELAGVFAL--EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCCEEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 44577888999998764211 124678999999999988 58999999999888887653
No 295
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=49.28 E-value=18 Score=31.09 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=26.7
Q ss_pred HHHHHHHHHHcC--CCCCCCcceEEEeCCC--------CCHHHHHHH
Q 018797 256 GHALEYLLDTLG--LSNPNDVLPLYIGDDR--------TDEDAFKVI 292 (350)
Q Consensus 256 G~Al~~Ll~~lg--i~~~~~~~vi~~GD~~--------ND~~Mf~~~ 292 (350)
...++.+++.+| ++.+ ++++|||+. +|+.+=+.+
T Consensus 111 p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred cHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHHC
Confidence 457889999998 7766 999999986 577655555
No 296
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=47.79 E-value=26 Score=31.78 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCcce-EEEeCCC-CCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLP-LYIGDDR-TDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~v-i~~GD~~-ND~~Mf~~~ 292 (350)
-+-...+.+++.++++.. ++ ++|||+. +|+.+=+.+
T Consensus 189 P~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 189 PSPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CCHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 456677888999998765 65 9999998 899876666
No 297
>PRK14557 pyrH uridylate kinase; Provisional
Probab=46.50 E-value=55 Score=30.17 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=42.8
Q ss_pred hccCCEEEE-EecCcccCCC-CCCCCCCCCCH----HH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhhcccC
Q 018797 69 AKEKKIAVF-LNYDGTLSPI-VDDPDRVFMSD----EM---------RAAVREVAKY-FPTAIISGRSREKVMGFVELCN 132 (350)
Q Consensus 69 ~~~k~~lif-~D~DGTLl~~-~~~p~~~~is~----~~---------~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~l~~ 132 (350)
.++...+++ +|.||-.... ..+|+...++. ++ ..|++...+. .+++|++|+....+..++.-.
T Consensus 152 l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~- 230 (247)
T PRK14557 152 MNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGE- 230 (247)
T ss_pred hCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcccCHHHHHHHHHHHHHHCCCcEEEEeCCCChHHHHHHcCC-
Confidence 456777777 4999998863 22333222111 11 1223333333 589999999999998888421
Q ss_pred ceEeccCcceEeCCCC
Q 018797 133 VYYAGSHGMDILAPPR 148 (350)
Q Consensus 133 l~~i~~nGa~I~~~~~ 148 (350)
..|+.|.....
T Consensus 231 -----~~GT~i~~~~~ 241 (247)
T PRK14557 231 -----HVGTLINDDAS 241 (247)
T ss_pred -----CCcEEEecCcc
Confidence 23666654433
No 298
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=46.40 E-value=32 Score=32.23 Aligned_cols=55 Identities=24% Similarity=0.315 Sum_probs=43.5
Q ss_pred CEEEEEecCcccCC-CCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 018797 73 KIAVFLNYDGTLSP-IVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGF 127 (350)
Q Consensus 73 ~~lif~D~DGTLl~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~ 127 (350)
++++-+=||||-.. ...+|+..++..+..+||.++.....-++++||+=..|-..
T Consensus 3 ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~~i~~AGRTD~GVHA~ 58 (266)
T COG0101 3 RIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHAL 58 (266)
T ss_pred eEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcceeEEecCCCcCcccc
Confidence 67788999999875 45667777888899999999886655789999987766554
No 299
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=45.74 E-value=63 Score=28.44 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=34.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC
Q 018797 245 MEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST 306 (350)
Q Consensus 245 lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na 306 (350)
.++|-+ |.--++..++.++++.. ..++|||..+|+.+=..+ +-. ++.+.+.
T Consensus 101 c~cRKP----~~gm~~~~~~~~~iD~~---~s~~VGD~~~Dlq~a~n~---gi~-~~~~~~~ 151 (181)
T COG0241 101 CDCRKP----KPGMLLSALKEYNIDLS---RSYVVGDRLTDLQAAENA---GIK-GVLVLTG 151 (181)
T ss_pred CcccCC----ChHHHHHHHHHhCCCcc---ceEEecCcHHHHHHHHHC---CCC-ceEEEcC
Confidence 445544 34456677788888877 999999999997655544 333 5655554
No 300
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=45.72 E-value=42 Score=30.28 Aligned_cols=62 Identities=18% Similarity=0.269 Sum_probs=38.4
Q ss_pred HhccCCEEEEEecCcccCCCC-CCCCCC---CCC-HHH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIV-DDPDRV---FMS-DEM---------RAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~-~~p~~~---~is-~~~---------~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
..++++.++++|.||-+.... ..|+.. .++ +++ ..+++.+.+. .++.|+.|+..+.+.+++.
T Consensus 144 ~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~ 220 (229)
T cd04239 144 EIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALK 220 (229)
T ss_pred HcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHHc
Confidence 356788889999999997531 122222 122 222 1334444444 5899999998888877764
No 301
>PRK00358 pyrH uridylate kinase; Provisional
Probab=45.57 E-value=44 Score=30.17 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=39.1
Q ss_pred HHhccCCEEEEEecCcccCCC-CCCCCCCC---CCH-HH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 67 KAAKEKKIAVFLNYDGTLSPI-VDDPDRVF---MSD-EM---------RAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~~-~~~p~~~~---is~-~~---------~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
...++.+.++++|.||-.... ..+|+... ++. +. ..+++.+.+. .++.|++|+....+.+++.
T Consensus 145 ~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~ 222 (231)
T PRK00358 145 EEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEKGLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVK 222 (231)
T ss_pred HHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHcCCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHC
Confidence 335678888999999999752 22233222 221 11 1233333344 5899999998888888774
No 302
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=45.23 E-value=69 Score=29.45 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=36.0
Q ss_pred cHHHHHHHhccCCEEEEEec-CcccCCC----CC-CCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChh
Q 018797 61 SFDKMMKAAKEKKIAVFLNY-DGTLSPI----VD-DPDRVFMSDEMRAAVREVAKY-FPTAIISGRSRE 122 (350)
Q Consensus 61 ~f~~~~~~~~~k~~lif~D~-DGTLl~~----~~-~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~ 122 (350)
.++++.+.+...++++.+|+ ||.+.+. +. +.-.........+.++++.+. ...+++|+++..
T Consensus 112 ~~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~ 180 (254)
T TIGR00735 112 LIYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKD 180 (254)
T ss_pred HHHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcc
Confidence 34455555544788889995 5654420 00 000011234567777888777 578888998774
No 303
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=44.69 E-value=19 Score=31.32 Aligned_cols=43 Identities=26% Similarity=0.291 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCc-eEEEEcC
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQG-YPIIVSS 305 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g-~~Vav~n 305 (350)
=+.|+++.++.++++.+ +++.+||.. +|+=.=.. .| ++|.|..
T Consensus 95 ~~~~fr~Al~~m~l~~~---~vvmVGDqL~TDVlggnr-----~G~~tIlV~P 139 (175)
T COG2179 95 FGRAFRRALKEMNLPPE---EVVMVGDQLFTDVLGGNR-----AGMRTILVEP 139 (175)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcchhhhhhhcccc-----cCcEEEEEEE
Confidence 37899999999999988 999999976 56421111 14 5777764
No 304
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=44.21 E-value=7.5 Score=27.91 Aligned_cols=27 Identities=26% Similarity=0.585 Sum_probs=17.2
Q ss_pred HHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHH
Q 018797 258 ALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKV 291 (350)
Q Consensus 258 Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~ 291 (350)
=|+.|++++| .+|++||-.-|++|++.
T Consensus 6 DVqQLLK~fG-------~~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFG-------IIIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCC-------EEEEeCChHHHHHHHHH
Confidence 3678888888 68999999999998753
No 305
>PRK03609 umuC DNA polymerase V subunit UmuC; Reviewed
Probab=44.11 E-value=65 Score=32.04 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 217 EDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+....+.+.+.+++.+| |.+.+.+ ...++||.-.
T Consensus 75 ~~y~~~s~~i~~~l~~~tp~ve~~siDE~~lDvt~~ 110 (422)
T PRK03609 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 (422)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEeccccceecCCCC
Confidence 34456666777777776 5566655 5789999754
No 306
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=43.32 E-value=35 Score=31.57 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=22.3
Q ss_pred CcHHHHHHHhc--cCCEEEEEecCcccCCCC
Q 018797 60 GSFDKMMKAAK--EKKIAVFLNYDGTLSPIV 88 (350)
Q Consensus 60 ~~f~~~~~~~~--~k~~lif~D~DGTLl~~~ 88 (350)
.+|+.+.++.. ....+|++|+|-||+.+.
T Consensus 5 ~s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~ 35 (252)
T PF11019_consen 5 YSFHEVQDYLENADQDTLVVFDIDDTLITPK 35 (252)
T ss_pred cCHHHHHHHHHcCCCCeEEEEEcchhhhcCc
Confidence 46777765553 388999999999999853
No 307
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=43.30 E-value=41 Score=35.33 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=46.9
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCC--------CHHHHHHHHHHHhcC-CEEEEcCCChhhHH---hhhc-ccCceEecc
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFM--------SDEMRAAVREVAKYF-PTAIISGRSREKVM---GFVE-LCNVYYAGS 138 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~i--------s~~~~~aL~~L~~~~-~v~I~SGR~~~~v~---~~~~-l~~l~~i~~ 138 (350)
..++|++|+|||++...- =...| +...-..-.++.+++ +++.+|.|+..... .++. +...+.+--
T Consensus 529 n~kIVISDIDGTITKSDv--LGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDV--LGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred CCcEEEecCCCceEhhhh--hhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 457899999999997310 00111 123344455556675 89999999886533 3442 334456666
Q ss_pred CcceEeCCCCC
Q 018797 139 HGMDILAPPRP 149 (350)
Q Consensus 139 nGa~I~~~~~~ 149 (350)
.|=.|..|.+.
T Consensus 607 dGPViLSPd~l 617 (738)
T KOG2116|consen 607 DGPVILSPDSL 617 (738)
T ss_pred CCCEEeCCCcc
Confidence 67777777764
No 308
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=42.24 E-value=47 Score=32.17 Aligned_cols=51 Identities=16% Similarity=0.286 Sum_probs=41.0
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCCh
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSR 121 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~ 121 (350)
.+.+..||+=|+||.=.+-++||-..+|.+.-..|.+.|. .+|++-|---+
T Consensus 4 ~~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~--~~F~VLTnGEH 54 (389)
T TIGR02399 4 INTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLE--KEFYVLTNGEH 54 (389)
T ss_pred cCCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhc--CcEEEEeCCcc
Confidence 3578899999999999999999988889888888887776 45666664433
No 309
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=42.03 E-value=56 Score=30.35 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=16.5
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
....+.+.++++|.||-+..
T Consensus 179 ~~l~A~~li~ltdv~Gv~~~ 198 (268)
T PRK14058 179 GALKAEALVLLSDVPGLLRD 198 (268)
T ss_pred HHcCCCEEEEEeCChhhccC
Confidence 34568889999999999976
No 310
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=41.67 E-value=41 Score=31.69 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=30.6
Q ss_pred CCCHHHHHH-HHHHHcC--CCCCCCcceEEEeCCCCCHHHHHHHH
Q 018797 252 EWDKGHALE-YLLDTLG--LSNPNDVLPLYIGDDRTDEDAFKVIK 293 (350)
Q Consensus 252 ~~~KG~Al~-~Ll~~lg--i~~~~~~~vi~~GD~~ND~~Mf~~~~ 293 (350)
..+|..++. ...+.++ .+.+ .+|++||+.||+.|..-++
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~---~vI~vGDs~~Dl~ma~g~~ 231 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRS---NIILLGDSQGDLRMADGVA 231 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcc---eEEEECcChhhhhHhcCCC
Confidence 357887766 5778888 5655 8999999999999976664
No 311
>PRK03858 DNA polymerase IV; Validated
Probab=41.31 E-value=1.4e+02 Score=29.25 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 215 REEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 215 ~~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+.+....+.+.+.+++.+| |.+...+ ...++||+..
T Consensus 72 d~~~y~~~s~~i~~~l~~~s~~ve~~siDe~~ldvt~~ 109 (396)
T PRK03858 72 RMSAYSRASKAVFEVFRDTTPLVEGLSIDEAFLDVGGL 109 (396)
T ss_pred CHHHHHHHHHHHHHHHHHhCCceEEecCCeEEEEcccc
Confidence 3344456667777777776 4455544 5789999864
No 312
>PRK14558 pyrH uridylate kinase; Provisional
Probab=41.03 E-value=57 Score=29.48 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=38.4
Q ss_pred hccCCEEEEEecCcccCCC-CCCCCCCC---CC-HHHH---------HHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 69 AKEKKIAVFLNYDGTLSPI-VDDPDRVF---MS-DEMR---------AAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~-~~~p~~~~---is-~~~~---------~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.+++..++++|.||-.... ..+|+... ++ .++. .+++-+.+. .++.|++|+....+..++.
T Consensus 145 l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~ 220 (231)
T PRK14558 145 MKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKALK 220 (231)
T ss_pred cCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHHC
Confidence 4678899999999999863 22333222 33 1222 333333344 5899999998777777663
No 313
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=40.77 E-value=95 Score=28.88 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=16.1
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
...++...++++|.||-+..
T Consensus 172 ~~l~ad~li~~TdVdGVy~~ 191 (262)
T cd04255 172 EVIGARNLIFVKDEDGLYTA 191 (262)
T ss_pred HHhCCCEEEEEeccCeeECC
Confidence 33567889999999999974
No 314
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=39.84 E-value=40 Score=30.98 Aligned_cols=21 Identities=10% Similarity=0.143 Sum_probs=16.8
Q ss_pred HHhccCCEEEEEecCcccCCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~~ 87 (350)
...++.+.++++|.||-+...
T Consensus 153 ~~l~Ad~liilTDVdGvy~~d 173 (251)
T cd04242 153 GLVNADLLILLSDVDGLYDKN 173 (251)
T ss_pred HHcCCCEEEEecCcCEEEeCC
Confidence 335688899999999999763
No 315
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=38.98 E-value=17 Score=37.16 Aligned_cols=20 Identities=30% Similarity=0.301 Sum_probs=15.6
Q ss_pred hcCCEEEEcCCChhhHHhhh
Q 018797 109 KYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 109 ~~~~v~I~SGR~~~~v~~~~ 128 (350)
++...+|+|+-+...++.+.
T Consensus 121 ~~g~~vvVSASp~~~Vepfa 140 (497)
T PLN02177 121 SFGKRYIITASPRIMVEPFV 140 (497)
T ss_pred hCCCEEEEECCcHHHHHHHH
Confidence 33457999999998888776
No 316
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=38.50 E-value=1.2e+02 Score=27.93 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=17.6
Q ss_pred HHHhccCCEEEEEecCcccCCC
Q 018797 66 MKAAKEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~~ 87 (350)
++..+..+.++++|.||-+-..
T Consensus 157 A~~l~pd~v~f~tdVdGVy~~~ 178 (252)
T COG1608 157 AKELKPDRVIFLTDVDGVYDRD 178 (252)
T ss_pred HHHhCCCEEEEEecCCceecCC
Confidence 3345688999999999999874
No 317
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=38.40 E-value=1.1e+02 Score=24.00 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHh
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKG 294 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~ 294 (350)
.|-..++.|++.+.-. ..|.||||. -|.+....+.+
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHHH
Confidence 8999999999988543 899999955 79888776643
No 318
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=38.32 E-value=80 Score=33.89 Aligned_cols=61 Identities=21% Similarity=0.245 Sum_probs=38.4
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCC-------------------------CCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVF-------------------------MSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~-------------------------is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
..++...++++|.||-+.....+|+... |-++. ++...+.+. .+++|++|+..
T Consensus 179 ~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl-~aa~~a~~~gi~v~I~~g~~~ 257 (715)
T TIGR01092 179 ELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKV-KAAVWAAYGGTPVIIASGTAP 257 (715)
T ss_pred HcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHH-HHHHHHHHCCCeEEEeCCCCc
Confidence 3467889999999999976433332211 22333 233334444 57899999988
Q ss_pred hhHHhhhc
Q 018797 122 EKVMGFVE 129 (350)
Q Consensus 122 ~~v~~~~~ 129 (350)
..+.+++.
T Consensus 258 ~~l~~~l~ 265 (715)
T TIGR01092 258 KNITKVVE 265 (715)
T ss_pred chHHHHhc
Confidence 77877773
No 319
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=38.28 E-value=64 Score=29.19 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=38.8
Q ss_pred HhccCCEEEEEecCcccCCCC-CCCCCCC---CCH-H---------HHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIV-DDPDRVF---MSD-E---------MRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~-~~p~~~~---is~-~---------~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
..++++.++++|.||-+.... ..|+... ++. + -..+++-+.+. .++.|++|+..+.+.+++.
T Consensus 146 ~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~~~~~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~ 222 (231)
T cd04254 146 EINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSKGLKVMDATAFTLCRDNNLPIVVFNINEPGNLLKAVK 222 (231)
T ss_pred HcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhcchhhhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHC
Confidence 346788888999999998532 2233221 221 1 12233333444 5899999999999988874
No 320
>cd01701 PolY_Rev1 DNA polymerase Rev1. Rev1 is a translesion synthesis (TLS) polymerase found in eukaryotes. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Rev1 has both structural and enzymatic roles. Structurally, it is believed to interact with other nonclassical polymerases and replication machinery to act as a scaffold. Enzymatically, it catalyzes the specific insertion of dCMP opposite abasic sites. Rev1 interacts with the Rev7 subunit of the B-family TLS polymerase Pol zeta (Rev3/Rev7). Rev1 is known to actively promote the introduction of mutations, potentially making it a significant target for cancer treatment.
Probab=37.42 E-value=2.8e+02 Score=27.36 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHHhhCC-CcEEec-CCeEEEEEcC
Q 018797 217 EDYSILQEKAKAVLRNYP-DFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~~-~l~v~~-g~~~lEI~p~ 250 (350)
+....+.+++.+++..|. .+.+.+ ...++|+...
T Consensus 122 ~~Y~~~s~~i~~il~~~s~~ve~~SiDE~~lDvt~~ 157 (404)
T cd01701 122 EAYEEVSLTFYEILASYTDNIEAVSCDEALIDITSL 157 (404)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEcccceEEEEcccc
Confidence 345566677777777773 455554 5789999865
No 321
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=37.41 E-value=1.1e+02 Score=27.42 Aligned_cols=60 Identities=22% Similarity=0.293 Sum_probs=35.4
Q ss_pred hccCCEEEEEecCcccCCC-CCCCCCC---CCCHH-------------------HHHHHHHHHhc-CCEEEEcCCChhhH
Q 018797 69 AKEKKIAVFLNYDGTLSPI-VDDPDRV---FMSDE-------------------MRAAVREVAKY-FPTAIISGRSREKV 124 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~-~~~p~~~---~is~~-------------------~~~aL~~L~~~-~~v~I~SGR~~~~v 124 (350)
.++...++++|.||-+... ..+|+.. .++.+ -..+++.+.+. .+++|++|+....+
T Consensus 128 l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~g~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l 207 (221)
T TIGR02076 128 SKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSSSVKAGSNEVVDPLAAKIIERSKIRTIVVNGRDPENL 207 (221)
T ss_pred cCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCCCccCCCCceeHHHHHHHHHHCCCcEEEECCCCccHH
Confidence 4678888999999999752 2223322 12111 12233333344 47888888877777
Q ss_pred Hhhh
Q 018797 125 MGFV 128 (350)
Q Consensus 125 ~~~~ 128 (350)
..++
T Consensus 208 ~~~l 211 (221)
T TIGR02076 208 EKVL 211 (221)
T ss_pred HHHH
Confidence 6655
No 322
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=36.87 E-value=60 Score=29.49 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcC--CChhhHHhhhc
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISG--RSREKVMGFVE 129 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG--R~~~~v~~~~~ 129 (350)
-+.+++.|+|||+... +.+.+.++++++.. .-++++| |+.+.+..++.
T Consensus 43 ~~~l~ivDldga~~g~----------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 43 VDKIHVVDLDGAFEGK----------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CCEEEEEECcchhcCC----------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 3557779999999762 12577888888774 3355555 46677877765
No 323
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=36.24 E-value=62 Score=35.22 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCC---CccceEEeC
Q 018797 253 WDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPK---ETKASYSLN 317 (350)
Q Consensus 253 ~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~---~t~A~y~l~ 317 (350)
-||-.-++-|.+ .| + -+.+-||+.||-++|+.+ ..|++||-+.- +..++.++-
T Consensus 725 ~DK~lLVk~L~~-~g---~---VVAVTGDGTNDaPALkeA-----DVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 725 NDKHLLVKGLIK-QG---E---VVAVTGDGTNDAPALKEA-----DVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred chHHHHHHHHHh-cC---c---EEEEecCCCCCchhhhhc-----ccchhccccchhhhhhhCCeEEE
Confidence 488877777762 22 2 566779999999999999 78999987643 356777754
No 324
>cd01703 PolY_Pol_iota DNA Polymerase iota. Pol iota, also called Rad30B, is a translesion synthesis (TLS) polymerase. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol iota is thought to be one of the least efficient polymerases, particularly when opposite pyrimidines; it can incorporate the correct nucleotide opposite a purine much more efficiently than opposite a pyrimidine, and prefers to insert guanosine instead of adenosine opposite thymidine. Pol iota is believed to use Hoogsteen rather than Watson-Crick base pairing, which may explain the varying efficiency for different template nucleotides.
Probab=35.89 E-value=2.5e+02 Score=27.57 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhhC-C--CcEEec-CCeEEEEEcC
Q 018797 219 YSILQEKAKAVLRNY-P--DFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 219 ~~~~~~~l~~~l~~~-~--~l~v~~-g~~~lEI~p~ 250 (350)
..++.+++.+++..| | .+...+ ...++|++..
T Consensus 72 Y~~~S~~i~~~l~~~sp~~~ve~~SiDE~~lDvt~~ 107 (379)
T cd01703 72 FRDMSKKVYRLLRSYSWNDRVERLGFDENFMDVTEM 107 (379)
T ss_pred HHHHHHHHHHHHHHcCCHhhEEecCCCcEEEEccCc
Confidence 345556677777776 4 344443 5789999865
No 325
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=35.79 E-value=52 Score=27.96 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~ 292 (350)
-|-..++.|++.+.-. ....+++||+..+|..+.+.+
T Consensus 102 ~K~~~l~~i~~~~~~~--~~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQ--GNPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCC--CCCEEEEeCCCchhHHHHHHc
Confidence 4888999999877521 112777899999999999988
No 326
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=35.23 E-value=30 Score=34.06 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=31.5
Q ss_pred hccCCEEEEEecCcccCCCCC------CCCC-CCCCHHHHHHHHHHHhc-CCEEEEc
Q 018797 69 AKEKKIAVFLNYDGTLSPIVD------DPDR-VFMSDEMRAAVREVAKY-FPTAIIS 117 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~------~p~~-~~is~~~~~aL~~L~~~-~~v~I~S 117 (350)
.++..+++.|||||||..... +|.+ ..+.++.-.-|+.|.+. +.++|.|
T Consensus 71 v~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~ift 127 (422)
T KOG2134|consen 71 VNGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFT 127 (422)
T ss_pred cCCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEe
Confidence 357788899999999997432 1222 23345556667777776 4566555
No 327
>PRK01810 DNA polymerase IV; Validated
Probab=35.10 E-value=4.5e+02 Score=25.83 Aligned_cols=36 Identities=11% Similarity=0.211 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 215 REEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 215 ~~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+.+....+.+.+.+++..| |.+.+.+ ...++||...
T Consensus 79 d~~~y~~~s~~i~~~l~~~sp~ve~~siDe~~ldvt~~ 116 (407)
T PRK01810 79 NFDRYREASRQMFQILSEFTPLVQPVSIDEGYLDITDC 116 (407)
T ss_pred ChHHHHHHHHHHHHHHHHhCCceEEecCCeEEEeccCc
Confidence 3444456667777777776 4566554 5789999854
No 328
>PRK14556 pyrH uridylate kinase; Provisional
Probab=35.07 E-value=77 Score=29.37 Aligned_cols=61 Identities=10% Similarity=0.072 Sum_probs=40.7
Q ss_pred hccCCEEEEEecCcccCCC-CCCCCCCC---CC------HH----HHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 69 AKEKKIAVFLNYDGTLSPI-VDDPDRVF---MS------DE----MRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~-~~~p~~~~---is------~~----~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.++...++++|.||-.... ..+|+-.. ++ .. -..+++.+.+. .+++|+.|+....+.+++.
T Consensus 163 l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~ 238 (249)
T PRK14556 163 IGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVL 238 (249)
T ss_pred cCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHHc
Confidence 4678888999999998752 22333111 11 11 12456666666 5999999999999998874
No 329
>COG4996 Predicted phosphatase [General function prediction only]
Probab=34.69 E-value=21 Score=29.78 Aligned_cols=14 Identities=29% Similarity=0.218 Sum_probs=12.1
Q ss_pred EEEEEecCcccCCC
Q 018797 74 IAVFLNYDGTLSPI 87 (350)
Q Consensus 74 ~lif~D~DGTLl~~ 87 (350)
++|++|.||||-++
T Consensus 1 ~~i~~d~d~t~wdh 14 (164)
T COG4996 1 RAIVFDADKTLWDH 14 (164)
T ss_pred CcEEEeCCCccccc
Confidence 36899999999984
No 330
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=34.59 E-value=79 Score=29.47 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=38.5
Q ss_pred cCCEEEEEecCcccCCCCCC---------------------CCCCCCCHHHHHHHHHHHhcC-------CEEEEcCCChh
Q 018797 71 EKKIAVFLNYDGTLSPIVDD---------------------PDRVFMSDEMRAAVREVAKYF-------PTAIISGRSRE 122 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~~~~~---------------------p~~~~is~~~~~aL~~L~~~~-------~v~I~SGR~~~ 122 (350)
.++.=|+||-|++|...... |-..-+-.....+|.+|++.. +++|+|.|+..
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~ap 198 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAP 198 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCc
Confidence 46677999999999983211 000111245677888888751 48999999987
Q ss_pred hHHhhh
Q 018797 123 KVMGFV 128 (350)
Q Consensus 123 ~v~~~~ 128 (350)
.-.+.+
T Consensus 199 ah~RvI 204 (264)
T PF06189_consen 199 AHERVI 204 (264)
T ss_pred hhHHHH
Confidence 765544
No 331
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=34.03 E-value=78 Score=28.83 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=29.8
Q ss_pred CEEEEEec--CcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcC--CChhhHHhhhc
Q 018797 73 KIAVFLNY--DGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISG--RSREKVMGFVE 129 (350)
Q Consensus 73 ~~lif~D~--DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG--R~~~~v~~~~~ 129 (350)
..++++|+ |||+... ..+.++++.+.. .-+|++| |+.+.+..++.
T Consensus 163 ~~ii~tdi~~dGt~~G~------------~~~li~~l~~~~~ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 163 GGIIYTDIAKDGKMSGP------------NFELTGQLVKATTIPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CEEEEecccCcCCCCcc------------CHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHH
Confidence 57777777 7888762 255666666553 3467777 67778887764
No 332
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=33.83 E-value=75 Score=30.74 Aligned_cols=48 Identities=17% Similarity=0.301 Sum_probs=38.0
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCCh
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSR 121 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~ 121 (350)
+..||+=|+||.=.+-++||-..+|.+.-..|.++|. .+|++-|---+
T Consensus 1 enlLivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~--~~F~VLTnGEH 48 (381)
T PF09506_consen 1 ENLLIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLE--GHFYVLTNGEH 48 (381)
T ss_pred CCeeEEecCCccchhhccCccccccCHHHHHHHHHhc--CcEEEEeCCcc
Confidence 3578999999999999999988888888888877776 45666664433
No 333
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=33.76 E-value=23 Score=36.25 Aligned_cols=56 Identities=20% Similarity=0.191 Sum_probs=38.8
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEE
Q 018797 245 MEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYS 315 (350)
Q Consensus 245 lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~ 315 (350)
-|..|. +|=..++.-.. ... .+...||+.||-++|..+ ..|++|.++... ..|+.+
T Consensus 491 AeatPE---dK~~~I~~eQ~----~gr---lVAMtGDGTNDAPALAqA-----dVg~AMNsGTqAAkEAaNMV 548 (681)
T COG2216 491 AEATPE---DKLALIRQEQA----EGR---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMV 548 (681)
T ss_pred hcCChH---HHHHHHHHHHh----cCc---EEEEcCCCCCcchhhhhc-----chhhhhccccHHHHHhhccc
Confidence 455565 66555444322 222 888999999999999999 799999887542 355555
No 334
>PLN02458 transferase, transferring glycosyl groups
Probab=33.49 E-value=69 Score=30.92 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEEeCCCC--CHHHHHHHHhC
Q 018797 255 KGHALEYLLDTLGLSNPNDVLPLYIGDDRT--DEDAFKVIKGR 295 (350)
Q Consensus 255 KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N--D~~Mf~~~~~~ 295 (350)
.-.||++|-++. ++ -++||+|+.| |++.|+.++..
T Consensus 190 RN~AL~~IR~h~-l~-----GVVyFADDdNtYsl~LFeEmR~i 226 (346)
T PLN02458 190 RNLALRHIEHHK-LS-----GIVHFAGLSNVYDLDFFDEIRDI 226 (346)
T ss_pred HHHHHHHHHhcC-cC-----ceEEEccCCCcccHHHHHHHhcC
Confidence 457888877643 22 8999999988 88999999864
No 335
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=33.43 E-value=1.1e+02 Score=32.90 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=37.7
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCCC-------------------------CHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVFM-------------------------SDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~i-------------------------s~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
..++...++++|.||-+.....+|+...+ .++. ++...+.+. .+++|++|+..
T Consensus 187 ~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl-~Aa~~a~~~Gi~v~I~~g~~~ 265 (718)
T PLN02418 187 ELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKV-KAAVNAASAGIPVVITSGYAL 265 (718)
T ss_pred HcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHH-HHHHHHHHCCCcEEEeCCCCc
Confidence 34678899999999999764333321111 1111 233344444 57899999988
Q ss_pred hhHHhhhc
Q 018797 122 EKVMGFVE 129 (350)
Q Consensus 122 ~~v~~~~~ 129 (350)
..+.+++.
T Consensus 266 ~~l~~~l~ 273 (718)
T PLN02418 266 DNIRKVLR 273 (718)
T ss_pred chHHHHhc
Confidence 77777763
No 336
>PRK10671 copA copper exporting ATPase; Provisional
Probab=33.33 E-value=1.1e+02 Score=33.43 Aligned_cols=78 Identities=15% Similarity=0.260 Sum_probs=49.7
Q ss_pred HHHhhCCCCCCcHHHHHHH-hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhh
Q 018797 50 SWMMEHPSALGSFDKMMKA-AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGF 127 (350)
Q Consensus 50 ~~~~~~~~al~~f~~~~~~-~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~ 127 (350)
.|+.+++-....+++.... ......++++-.||+++....- .-.+-+...++|++|.+. .+++++||.+...+..+
T Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l--~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~i 683 (834)
T PRK10671 606 ALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAI--RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAI 683 (834)
T ss_pred HHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEc--cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 4665554322333333222 3344566777789997743211 123567788999999888 58999999999887766
Q ss_pred hc
Q 018797 128 VE 129 (350)
Q Consensus 128 ~~ 129 (350)
.+
T Consensus 684 a~ 685 (834)
T PRK10671 684 AK 685 (834)
T ss_pred HH
Confidence 54
No 337
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=33.32 E-value=1.1e+02 Score=28.15 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=15.8
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
.+.++.+.++++|.||-+.+
T Consensus 175 ~~L~A~~li~~tdv~Gv~~~ 194 (257)
T cd04251 175 AALKAERLILLTDVEGLYLD 194 (257)
T ss_pred HHcCCCEEEEEeCChhheeC
Confidence 34568899999999998753
No 338
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=33.27 E-value=81 Score=29.57 Aligned_cols=42 Identities=31% Similarity=0.378 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCCcceEEEeCCC-CCHHHHHHHHhCCCce-EEEEcCC
Q 018797 257 HALEYLLDTLGLSNPNDVLPLYIGDDR-TDEDAFKVIKGRGQGY-PIIVSST 306 (350)
Q Consensus 257 ~Al~~Ll~~lgi~~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~-~Vav~na 306 (350)
...+..++.++.+.+ .++++||+. +|+.+=+.+ |+ ++.|..+
T Consensus 194 ~i~~~al~~~~~~~~---~~~mVGD~~~TDI~~a~~~-----G~~t~LV~TG 237 (269)
T COG0647 194 AIYEAALEKLGLDRS---EVLMVGDRLDTDILGAKAA-----GLDTLLVLTG 237 (269)
T ss_pred HHHHHHHHHhCCCcc---cEEEEcCCchhhHHHHHHc-----CCCEEEEccC
Confidence 345777888999877 999999987 898776666 65 4556544
No 339
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=33.13 E-value=1.4e+02 Score=27.93 Aligned_cols=59 Identities=25% Similarity=0.298 Sum_probs=36.1
Q ss_pred HHHHHhccCCEEEEEecCcccCCCCCCCC-------------------CCCCCHHHHHHHHHHHhcC-CEEEEcCCChhh
Q 018797 64 KMMKAAKEKKIAVFLNYDGTLSPIVDDPD-------------------RVFMSDEMRAAVREVAKYF-PTAIISGRSREK 123 (350)
Q Consensus 64 ~~~~~~~~k~~lif~D~DGTLl~~~~~p~-------------------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 123 (350)
+++.+.++.+.++++|.+|-|-+..+ |. ..-|-+..+.|++.+..-. ++.|++||-...
T Consensus 170 ~iA~aLkAekLi~ltdv~Gvl~~~~~-~s~i~~~~~~~~~~li~~~~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ 248 (265)
T COG0548 170 ALAAALKAEKLILLTDVPGVLDDKGD-PSLISELDAEEAEELIEQGIITGGMIPKVEAALEALESGVRRVHIISGRVPHS 248 (265)
T ss_pred HHHHHcCCCeEEEEeCCcccccCCCC-ceeeccCCHHHHHHHHhcCCccCccHHHHHHHHHHHHhCCCeEEEecCCCcch
Confidence 45555689999999999999887432 10 0122344445555544443 566677776655
No 340
>PRK14588 tRNA pseudouridine synthase ACD; Provisional
Probab=32.96 E-value=60 Score=30.43 Aligned_cols=56 Identities=23% Similarity=0.250 Sum_probs=41.9
Q ss_pred CEEEEEecCcccCC-CCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 73 KIAVFLNYDGTLSP-IVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 73 ~~lif~D~DGTLl~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+..+.+=||||=.. ...+|+..++..+..+||.++.....-++.+||+=..|-..-
T Consensus 3 ~~~l~iaYdGt~f~G~Q~Q~~~~TVq~~Le~aL~~l~~~~i~i~~AgRTDaGVHA~g 59 (272)
T PRK14588 3 TIALLLEYDGTDFAGSQWQTDGRTVQGALEAAWQALTQERRRIVLAGRTDAGVHARG 59 (272)
T ss_pred eEEEEEEEcCCceeeeEECCCCCCHHHHHHHHHHHhhCCCceEEEecCCCcCcCccc
Confidence 56788899999885 344566668888999999998765435788999877766543
No 341
>PRK12686 carbamate kinase; Reviewed
Probab=32.52 E-value=74 Score=30.51 Aligned_cols=59 Identities=10% Similarity=0.126 Sum_probs=40.0
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
..++.+.++++|.||-+.+.. +|+...++.-..+.++++..... +.||....++...+.
T Consensus 222 ~L~Ad~LIiLTDVdGVy~~~~-~p~ak~I~~I~~~e~~~li~~g~--~~tGGM~pKveAA~~ 280 (312)
T PRK12686 222 QIDADLLIILTGVENVFINFN-KPNQQKLDDITVAEAKQYIAEGQ--FAPGSMLPKVEAAID 280 (312)
T ss_pred HcCCCEEEEEeCchhhccCCC-CCCCeECCccCHHHHHHHhhCCC--ccCCCcHHHHHHHHH
Confidence 346788999999999998743 35544454444455666655543 468999999887553
No 342
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=32.42 E-value=85 Score=28.44 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=38.3
Q ss_pred HhccCCEEEEEe-cCcccCCCC-CCCCCCC---CCH-H---------HHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLN-YDGTLSPIV-DDPDRVF---MSD-E---------MRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D-~DGTLl~~~-~~p~~~~---is~-~---------~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
..+++..++++| .||-..... ..|+... ++- + -..+++-+.+. .+++|++|+..+.+.+++.
T Consensus 147 ~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~~~~~~d~~~~~~a~~~~i~v~i~~g~~~~~l~~~l~ 224 (233)
T TIGR02075 147 EINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKKNLKVMDLTAFALARDNNLPIVVFNIDEPGALKKVIL 224 (233)
T ss_pred HcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhcCHHHHHHHHHHHHHHCCCeEEEEeCCCcchHHHHHC
Confidence 346788888999 999987632 1232211 210 0 12233333443 5899999998888888774
No 343
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=32.21 E-value=1.1e+02 Score=27.90 Aligned_cols=18 Identities=17% Similarity=0.386 Sum_probs=15.4
Q ss_pred hccCCEEEEEecCcccCC
Q 018797 69 AKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~ 86 (350)
.++.+.++++|.||-+..
T Consensus 160 l~A~~li~ltdv~Gv~~~ 177 (252)
T cd04241 160 LKPERVIFLTDVDGVYDK 177 (252)
T ss_pred cCCCEEEEEeCCCeeECC
Confidence 457889999999999976
No 344
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=31.68 E-value=26 Score=35.08 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=13.9
Q ss_pred cCCEEEEEecCcccCC
Q 018797 71 EKKIAVFLNYDGTLSP 86 (350)
Q Consensus 71 ~k~~lif~D~DGTLl~ 86 (350)
...++|++|+|||++.
T Consensus 373 ~n~kiVVsDiDGTITk 388 (580)
T COG5083 373 NNKKIVVSDIDGTITK 388 (580)
T ss_pred CCCcEEEEecCCcEEe
Confidence 4667899999999998
No 345
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=31.44 E-value=1.5e+02 Score=26.42 Aligned_cols=61 Identities=23% Similarity=0.293 Sum_probs=35.5
Q ss_pred hccCCEEEEEecCcccCCCC-CCCCCC---CCCH-HH------------------HHHHHHHHhc-CCEEEEcCCChhhH
Q 018797 69 AKEKKIAVFLNYDGTLSPIV-DDPDRV---FMSD-EM------------------RAAVREVAKY-FPTAIISGRSREKV 124 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~-~~p~~~---~is~-~~------------------~~aL~~L~~~-~~v~I~SGR~~~~v 124 (350)
.++...++++|.||-+.... .+|+.. .++. ++ ..+++-+.+. .++.|+.|+....+
T Consensus 128 l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~g~~~~~d~~a~~~~~~~gi~~~I~~g~~p~~l 207 (221)
T cd04253 128 LGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKSSWKAGSNEPFDPLAAKIIERSGIKTIVVDGRDPENL 207 (221)
T ss_pred cCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCCCcCCCCCcchHHHHHHHHHHCCCeEEEECCCCccHH
Confidence 46788889999999997532 223222 1221 11 1122222333 47888888877777
Q ss_pred Hhhhc
Q 018797 125 MGFVE 129 (350)
Q Consensus 125 ~~~~~ 129 (350)
.+++.
T Consensus 208 ~~~l~ 212 (221)
T cd04253 208 ERALK 212 (221)
T ss_pred HHHHC
Confidence 77663
No 346
>PRK14133 DNA polymerase IV; Provisional
Probab=31.36 E-value=1.6e+02 Score=28.22 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 216 EEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 216 ~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
.+....+.+.+.+++..| |.+.+.+ ...++||...
T Consensus 76 ~~~y~~~s~~i~~~l~~~s~~ve~~siDe~~ldv~~~ 112 (347)
T PRK14133 76 HERYKEVSKNIFKILYEVTPIVEPVSIDEAYLDITNI 112 (347)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEccCCeEEEEccCC
Confidence 334455666677777776 4455544 5789999865
No 347
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=30.98 E-value=35 Score=28.14 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 95 FMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 95 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.+-+.+.++|++|++. .+++|+|+.+...+...+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~ 112 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLE 112 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccc
Confidence 3456789999999866 6999999999988777653
No 348
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=30.91 E-value=74 Score=30.29 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=32.6
Q ss_pred EEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCCChhhHHhh
Q 018797 75 AVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISGRSREKVMGF 127 (350)
Q Consensus 75 lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~ 127 (350)
.+.||.||.|-.- ...-|-..+++..|++.+ .+.++|-.+....+.+
T Consensus 24 tfifDcDGVlW~g------~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y 71 (306)
T KOG2882|consen 24 TFIFDCDGVLWLG------EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQY 71 (306)
T ss_pred EEEEcCCcceeec------CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHH
Confidence 4789999999982 122356778888888876 5788877666544443
No 349
>PRK09411 carbamate kinase; Reviewed
Probab=30.89 E-value=79 Score=30.08 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=35.8
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
..++.+.++++|.||-+.+. .+|+...++.-+.+.++++.. ++|....+++..+.
T Consensus 212 ~L~Ad~LIiLTDVdGV~~n~-~~p~~~~I~~it~~e~~~~~~------~~GgM~pKVeAA~~ 266 (297)
T PRK09411 212 QINADGLVILTDADAVYENW-GTPQQRAIRHATPDELAPFAK------ADGAMGPKVTAVSG 266 (297)
T ss_pred HhCCCEEEEEeCchhhccCC-CCCCCcCCCCcCHHHHHHhcc------CCCCcHHHHHHHHH
Confidence 34678999999999999875 345444444433443433332 58888888877543
No 350
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=30.89 E-value=29 Score=32.43 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=15.4
Q ss_pred ccCCEEEEEecCcccCCC
Q 018797 70 KEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~ 87 (350)
..+++.+++|+|.||+..
T Consensus 86 ~~~kk~lVLDLDeTLvHs 103 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHS 103 (262)
T ss_pred cCCCceEEEeCCCccccc
Confidence 467899999999999873
No 351
>cd00424 PolY Y-family of DNA polymerases. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Most TLS polymerases are members of the Y-family, including Pol eta, Pol kappa/IV, Pol iota, Rev1, and Pol V, which is found exclusively in bacteria. In eukaryotes, the B-family polymerase Pol zeta also functions as a TLS polymerase. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in ord
Probab=30.80 E-value=3e+02 Score=26.29 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 217 EDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+....+.+++.+++.+| |.+.+.+ ...++|++..
T Consensus 73 ~~y~~~s~~i~~~l~~~sp~ve~~siDE~~ldvt~~ 108 (343)
T cd00424 73 DLYRRLSERLLSELEEVAPLVEVASIDELFLDLTGS 108 (343)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEccCCEEEEECCCc
Confidence 44556667777777776 4566544 6789999865
No 352
>PRK12352 putative carbamate kinase; Reviewed
Probab=30.57 E-value=89 Score=30.03 Aligned_cols=60 Identities=7% Similarity=0.026 Sum_probs=39.0
Q ss_pred HHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 66 MKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+.+.++.+.++++|.||-+.+.. +|+...++.-+.+.++++.+... +.+|....++...+
T Consensus 224 A~aL~AdkLI~LTDV~GV~~d~~-~~~~~li~~lt~~e~~~li~~g~--i~~GgM~pKl~aA~ 283 (316)
T PRK12352 224 AREIHADILVITTGVEKVCIHFG-KPQQQALDRVDIATMTRYMQEGH--FPPGSMLPKIIASL 283 (316)
T ss_pred HHHhCCCEEEEEeCchhhccCCC-CCCcccccccCHHHHHHHHhcCC--cCCCCCHHHHHHHH
Confidence 33456889999999999998753 34443455444555566655442 44788888777654
No 353
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=30.52 E-value=83 Score=28.34 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=37.1
Q ss_pred HHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 66 MKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
+.+.++.+.++++|.||-+.. +|. ..++.=..+.+.++.... .+||..+.+++..+.
T Consensus 164 A~~l~A~~li~ltdv~Gv~~~---d~~-~~i~~i~~~e~~~l~~~~---~~tggm~~Kl~~a~~ 220 (231)
T TIGR00761 164 AAALGAEKLVLLTDVPGILNG---DGQ-SLISEIPLEEIEQLIEQG---IITGGMIPKVNAALE 220 (231)
T ss_pred HHHcCCCEEEEEECCCCeecC---CCC-eeccccCHHHHHHHHHcC---CCCCchHHHHHHHHH
Confidence 344568899999999999976 332 222222234445555443 389999999888664
No 354
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=29.73 E-value=46 Score=30.52 Aligned_cols=18 Identities=22% Similarity=0.431 Sum_probs=15.7
Q ss_pred ceEEEeCCCCCHHHHHHH
Q 018797 275 LPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~ 292 (350)
.+++|||+.+|+.+-+.+
T Consensus 186 i~I~IGDs~~Di~aA~~A 203 (237)
T PRK11009 186 IRIFYGDSDNDITAAREA 203 (237)
T ss_pred CeEEEcCCHHHHHHHHHc
Confidence 478999999999887777
No 355
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=29.49 E-value=1.4e+02 Score=29.42 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=35.5
Q ss_pred hccCCEEEEEecCcccCCCC-CCCCCCC---CC---HHHH-------------------HHHHHHHhc-CCEEEEcCCCh
Q 018797 69 AKEKKIAVFLNYDGTLSPIV-DDPDRVF---MS---DEMR-------------------AAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~-~~p~~~~---is---~~~~-------------------~aL~~L~~~-~~v~I~SGR~~ 121 (350)
.++...++++|.||-+.... .+|+... ++ ++.. ++.....+. .+++|++|+..
T Consensus 160 l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l~~~~~s~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~ 239 (368)
T PRK13402 160 ADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAMAGGAGSNVGTGGMRTKIQAAKIAMSHGIETFIGNGFTA 239 (368)
T ss_pred hCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHHhcccccCcCcCCchHHHHHHHHHHHcCCcEEEEcCCCc
Confidence 46788999999999997532 2233221 12 2221 223333333 47888888877
Q ss_pred hhHHhhh
Q 018797 122 EKVMGFV 128 (350)
Q Consensus 122 ~~v~~~~ 128 (350)
..+.+++
T Consensus 240 ~~l~~~l 246 (368)
T PRK13402 240 DIFNQLL 246 (368)
T ss_pred hHHHHHh
Confidence 6666665
No 356
>PRK00021 truA tRNA pseudouridine synthase A; Validated
Probab=29.02 E-value=80 Score=28.94 Aligned_cols=55 Identities=25% Similarity=0.327 Sum_probs=42.1
Q ss_pred CEEEEEecCcccCC-CCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 018797 73 KIAVFLNYDGTLSP-IVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGF 127 (350)
Q Consensus 73 ~~lif~D~DGTLl~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~ 127 (350)
+.++.+=||||-.. ...+|+..++..+..+||.++.....-++.+||+=..|-..
T Consensus 3 ~~~l~i~YdGt~y~G~q~q~~~~TVq~~le~aL~~~~~~~~~~~~agRTD~GVHA~ 58 (244)
T PRK00021 3 RIALTIEYDGTNFHGWQRQPNGRTVQGELEKALSKLAGEPVRVIGAGRTDAGVHAL 58 (244)
T ss_pred EEEEEEEECCCccceeeeCCCCCCHHHHHHHHHHHHhCCCeEEEEEccCCCccccc
Confidence 56788899999885 45567767888899999999875433588899987766654
No 357
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=29.00 E-value=88 Score=29.34 Aligned_cols=55 Identities=13% Similarity=0.157 Sum_probs=36.7
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
..++.+.++++|.||-+.+ +...++.-+.+.++++.+...+ +||....+++..+.
T Consensus 192 ~L~a~klv~ltdv~GV~~~-----~~~~i~~i~~~e~~~l~~~~~~--~~ggM~~Kv~~a~~ 246 (280)
T cd04237 192 ALKADKLIFLTDGPGLLDD-----DGELIRELTAQEAEALLETGAL--LTNDTARLLQAAIE 246 (280)
T ss_pred HcCCCEEEEEeCCCcccCC-----CCCccccCCHHHHHHHHHcCCC--CCCCHHHHHHHHHH
Confidence 3457889999999999964 1233333334556666655443 49999999888764
No 358
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=28.87 E-value=1.9e+02 Score=26.40 Aligned_cols=17 Identities=12% Similarity=0.348 Sum_probs=13.3
Q ss_pred hccCCEEEEEecCcccCC
Q 018797 69 AKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~ 86 (350)
.+++ .++++|.||-+..
T Consensus 168 l~A~-~i~ltdv~Gv~~~ 184 (252)
T cd04249 168 LNAD-LVLLSDVSGVLDA 184 (252)
T ss_pred cCCC-EEEEeCCcccCCC
Confidence 4566 6899999999864
No 359
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=28.66 E-value=1.4e+02 Score=24.92 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=38.2
Q ss_pred CEEEEEecCcccCCCCCCCCCC----CCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHh
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRV----FMSDEMRAAVREVAKY-FPTAIISGRSREKVMG 126 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~----~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~ 126 (350)
.+++-+|+|+||-|...++... .+-+..+..|..|.+. +..++||--+..++..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHH
Confidence 4778899999999976554321 2336678889999998 5778887666665443
No 360
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=28.46 E-value=72 Score=28.85 Aligned_cols=36 Identities=17% Similarity=0.040 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHcCCC-CCCCcceEEEeCC-CCCHHHHHHH
Q 018797 254 DKGHALEYLLDTLGLS-NPNDVLPLYIGDD-RTDEDAFKVI 292 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~-~~~~~~vi~~GD~-~ND~~Mf~~~ 292 (350)
=+-...+.+++.++.. .+ .+++|||+ .+|+.+=+.+
T Consensus 196 P~~~~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~ 233 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKN---RMLMVGDSFYTDILGANRL 233 (242)
T ss_pred CCHHHHHHHHHHcCCCCcc---cEEEECCCcHHHHHHHHHC
Confidence 3455677888888864 34 89999999 5999876666
No 361
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=28.36 E-value=2.4e+02 Score=24.93 Aligned_cols=51 Identities=12% Similarity=0.242 Sum_probs=39.0
Q ss_pred HHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 66 MKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
.+....+..+|++...|. ++.+.++++.+.+. .+++.+||.+-..+.++++
T Consensus 104 ~~~~~~gDvli~iS~SG~-------------s~~v~~a~~~Ak~~G~~vI~IT~~~~s~l~~l~~ 155 (196)
T PRK10886 104 RALGHAGDVLLAISTRGN-------------SRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLG 155 (196)
T ss_pred HHcCCCCCEEEEEeCCCC-------------CHHHHHHHHHHHHCCCEEEEEeCCCCChhhhccc
Confidence 333456778888877765 46789999998888 5899999998888877764
No 362
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=27.99 E-value=39 Score=35.69 Aligned_cols=62 Identities=19% Similarity=0.248 Sum_probs=43.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCCH
Q 018797 243 KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE--TKASYSLNDP 319 (350)
Q Consensus 243 ~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~--t~A~y~l~~~ 319 (350)
.+-+|-|. .|-.-|..|-++-. .+-.-||+.||-+.++.+ ..||+|..+.+. +.++.|+..|
T Consensus 564 gfAgVfpe---hKy~iV~~Lq~r~h-------i~gmtgdgvndapaLKkA-----digiava~atdaar~asdiVltep 627 (942)
T KOG0205|consen 564 GFAGVFPE---HKYEIVKILQERKH-------IVGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEP 627 (942)
T ss_pred CccccCHH---HHHHHHHHHhhcCc-------eecccCCCcccchhhccc-----ccceeeccchhhhcccccEEEcCC
Confidence 34445554 56655555544321 556679999999999999 789999998764 4677777644
No 363
>PRK12434 tRNA pseudouridine synthase A; Reviewed
Probab=27.74 E-value=91 Score=28.66 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=41.7
Q ss_pred CEEEEEecCcccCC-CCCCCC-CCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 73 KIAVFLNYDGTLSP-IVDDPD-RVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 73 ~~lif~D~DGTLl~-~~~~p~-~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+..+.+=||||=.. ...+|+ ..++..+..+||.++.....-++.+||+=..|-..-
T Consensus 3 ~~~l~i~YdGt~y~G~Q~Q~~~~~TVq~~le~aL~~~~~~~~~~~~agRTD~GVHA~~ 60 (245)
T PRK12434 3 NIKLTIQYDGSRYKGWQKLGNNDNTIQGKIESVLSEMTGEEIEIIGCGRTDAGVHALN 60 (245)
T ss_pred eEEEEEEECCCccceEeeCCCCCCCHHHHHHHHHHHHhCCCeEEEEeccCCCCcCccC
Confidence 56788999999776 444564 567888999999998765445778999887776643
No 364
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=27.44 E-value=1e+02 Score=27.79 Aligned_cols=20 Identities=20% Similarity=0.469 Sum_probs=16.6
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
...++++.++++|.||-+..
T Consensus 161 ~~l~A~~li~~tdV~Gv~~~ 180 (248)
T cd02115 161 AALKADRLVILTDVDGVYTA 180 (248)
T ss_pred HHcCCCEEEEEecCCeeecC
Confidence 34568899999999999875
No 365
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=27.22 E-value=1.4e+02 Score=27.59 Aligned_cols=47 Identities=28% Similarity=0.298 Sum_probs=27.2
Q ss_pred cCCEEEEEec--CcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCC--ChhhHHhhhc
Q 018797 71 EKKIAVFLNY--DGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISGR--SREKVMGFVE 129 (350)
Q Consensus 71 ~k~~lif~D~--DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR--~~~~v~~~~~ 129 (350)
+-..+|++|+ ||||..+ +.+.+++|++.. .-+|+||- +.+.++.+-+
T Consensus 160 g~~~ii~TdI~~DGtl~G~------------n~~l~~~l~~~~~ipviaSGGv~s~~Di~~l~~ 211 (241)
T COG0106 160 GLAHILYTDISRDGTLSGP------------NVDLVKELAEAVDIPVIASGGVSSLDDIKALKE 211 (241)
T ss_pred CCCeEEEEecccccccCCC------------CHHHHHHHHHHhCcCEEEecCcCCHHHHHHHHh
Confidence 4556666665 7887773 356666666663 33566663 4455555443
No 366
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=27.19 E-value=2.1e+02 Score=27.96 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=35.4
Q ss_pred hccCCEEEEEecCcccCCCC-CCCCCCC---CC---HHH-------------------HHHHHHHHhc-CCEEEEcCCCh
Q 018797 69 AKEKKIAVFLNYDGTLSPIV-DDPDRVF---MS---DEM-------------------RAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~-~~p~~~~---is---~~~-------------------~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
.++...++++|.||-+.... .+|+... ++ ++. .+|.....+. .+++|++|+..
T Consensus 156 l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~ 235 (363)
T TIGR01027 156 VGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRAGVPVIIASGSKP 235 (363)
T ss_pred cCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45788999999999998532 2333211 11 111 1233333333 47888888876
Q ss_pred hhHHhhhc
Q 018797 122 EKVMGFVE 129 (350)
Q Consensus 122 ~~v~~~~~ 129 (350)
..+.+++.
T Consensus 236 ~~l~~~l~ 243 (363)
T TIGR01027 236 EKIADALE 243 (363)
T ss_pred cHHHHHhc
Confidence 66766663
No 367
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=27.11 E-value=2.1e+02 Score=24.84 Aligned_cols=58 Identities=21% Similarity=0.162 Sum_probs=34.1
Q ss_pred ceEEEeCCCCCHHHHHHHHhC---CCceEEEEcCCCC-C----ccceEEeC-CHHHHHHHHHHHHhcccC
Q 018797 275 LPLYIGDDRTDEDAFKVIKGR---GQGYPIIVSSTPK-E----TKASYSLN-DPSEVLTFLLRLSRWRKS 335 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~~~~---~~g~~Vav~na~~-~----t~A~y~l~-~~~eV~~~L~~l~~~~~~ 335 (350)
.++++|+ ||++|..++++. +.|+.++- ++.. . ..|-.... +.++|++.++.|-+..+.
T Consensus 67 niiviG~--~~~dm~~A~n~l~~~gGG~vvv~-~g~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~~~ 133 (171)
T PF13382_consen 67 NIIVIGT--NDEDMALAANRLIEMGGGIVVVD-DGEVLAELPLPIAGLMSDLPAEEVARQLEELEEALRE 133 (171)
T ss_dssp -EEEEES--SHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHHHT
T ss_pred CEEEEEC--CHHHHHHHHHHHHHhCCCEEEEE-CCEEEEEEeccccceecCCCHHHHHHHHHHHHHHHHH
Confidence 9999997 688998888764 33443332 2211 0 12222222 568899999888876544
No 368
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=27.05 E-value=56 Score=33.35 Aligned_cols=25 Identities=24% Similarity=0.057 Sum_probs=17.1
Q ss_pred CCEEEEEecCcccCCCCCCCCCCCCCHHHH
Q 018797 72 KKIAVFLNYDGTLSPIVDDPDRVFMSDEMR 101 (350)
Q Consensus 72 k~~lif~D~DGTLl~~~~~p~~~~is~~~~ 101 (350)
.+.-+++|+||||+.. ....+.=|+
T Consensus 7 ~~~~~~fD~DGTLlrs-----~ssFpyFml 31 (498)
T PLN02499 7 TSYSVVSELEGTLLKD-----ADPFSYFML 31 (498)
T ss_pred ccceEEEecccceecC-----CCccHHHHH
Confidence 3456899999999982 234455555
No 369
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=26.99 E-value=1.3e+02 Score=32.36 Aligned_cols=58 Identities=10% Similarity=0.197 Sum_probs=43.3
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
....+++++=+||+++....= .-.+-++..++|++|++. .+++++||.....+..+.+
T Consensus 545 ~~g~~~v~va~~~~~~g~i~l--~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~ 603 (741)
T PRK11033 545 SAGKTVVLVLRNDDVLGLIAL--QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAG 603 (741)
T ss_pred hCCCEEEEEEECCEEEEEEEE--ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 344566777789998753211 124568899999999988 6899999999988887764
No 370
>PRK03103 DNA polymerase IV; Reviewed
Probab=26.79 E-value=1.1e+02 Score=30.12 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 215 REEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 215 ~~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+.+....+.+++.+++..| |.+.+.+ ...++||...
T Consensus 77 d~~~y~~~s~~i~~~l~~~sp~ve~~siDe~~lDvt~~ 114 (409)
T PRK03103 77 RMQRYIDVSLQITRILEDFTDLVEPFSIDEQFLDVTGS 114 (409)
T ss_pred CHHHHHHHHHHHHHHHHHhCccceecCCCeeEeeccch
Confidence 3344455666777777776 4566554 5789999854
No 371
>PRK02406 DNA polymerase IV; Validated
Probab=26.68 E-value=1.2e+02 Score=29.20 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 215 REEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 215 ~~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+.+....+.+++.+++..| |.+.+.+ ...++||...
T Consensus 67 d~~~y~~~s~~i~~~l~~~sp~ve~~siDe~~ldvt~~ 104 (343)
T PRK02406 67 RFDVYKEVSRQIREIFRRYTDLIEPLSLDEAYLDVTDN 104 (343)
T ss_pred ChHHHHHHHHHHHHHHHHhCCceEEccCCeEEEeccCc
Confidence 3334455666777777776 4565544 5789999754
No 372
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=26.20 E-value=1.1e+02 Score=28.82 Aligned_cols=57 Identities=26% Similarity=0.325 Sum_probs=35.5
Q ss_pred HHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 67 KAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
...++.+.++++|.||-+.+. .+|+ ..++.-..+.++++.... .+||....+++...
T Consensus 191 ~~l~Ad~li~lTdv~Gv~~~~-~d~~-~~i~~i~~~e~~~l~~~g---~~tGGM~~Kl~aa~ 247 (284)
T CHL00202 191 AKLNAEKLILLTDTPGILADI-NDPN-SLISTLNIKEARNLASTG---IISGGMIPKVNCCI 247 (284)
T ss_pred HHhCCCEEEEEeCChhhcCCC-CCCC-CccccccHHHHHHHHhcC---CCCCCHHHHHHHHH
Confidence 345678999999999999853 2343 233332233444554332 46888888877755
No 373
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=26.06 E-value=2.2e+02 Score=24.45 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=34.5
Q ss_pred HHHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 018797 65 MMKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISGRSR 121 (350)
Q Consensus 65 ~~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~ 121 (350)
+.++......+|.+|+.|.-.+ |++.-+.|.++...+ .++++=|-+.
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~~s----------Se~fA~~l~~~~~~G~~i~f~IGG~~ 107 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKALS----------SEEFADFLERLRDDGRDISFLIGGAD 107 (155)
T ss_pred HHHhcCCCCeEEEEecCCCcCC----------hHHHHHHHHHHHhcCCeEEEEEeCcc
Confidence 3444455669999999998776 678888999888875 5666666554
No 374
>PRK14586 tRNA pseudouridine synthase ACD; Provisional
Probab=25.85 E-value=93 Score=28.60 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=41.3
Q ss_pred CEEEEEecCcccCC-CCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 018797 73 KIAVFLNYDGTLSP-IVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGF 127 (350)
Q Consensus 73 ~~lif~D~DGTLl~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~ 127 (350)
+..+.+=||||=.. ...+|+..++..+..+||.++.....-++.+||+=..|-..
T Consensus 3 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~ 58 (245)
T PRK14586 3 RVAAVVSYDGSNFFGYQGQPDVRTVQGVFEDALERIFKQRIYTQAAGRTDTGVHAN 58 (245)
T ss_pred EEEEEEEEcCCceeeEEECCCCCCHHHHHHHHHHHHhCCCeeEEEecCCccCCCcc
Confidence 56788899999764 34566667888899999999875544577899987766554
No 375
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=25.46 E-value=80 Score=35.29 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 96 MSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 96 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
+-+++.++|+++++. ++++++|||+...+..+.+
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~ 603 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 603 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 467999999999999 6999999999998887763
No 376
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.45 E-value=1.3e+02 Score=26.15 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCC--CCCCcceEEEeCCC-CCHHHHHHHHhCCCceEEEEcCC
Q 018797 257 HALEYLLDTLGLS--NPNDVLPLYIGDDR-TDEDAFKVIKGRGQGYPIIVSST 306 (350)
Q Consensus 257 ~Al~~Ll~~lgi~--~~~~~~vi~~GD~~-ND~~Mf~~~~~~~~g~~Vav~na 306 (350)
.+.+.+++.++.. .....+++.|||-. ||+=|=..+ ..|+|.+..+
T Consensus 118 ~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~----G~~tilv~~g 166 (168)
T PF09419_consen 118 GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRM----GSYTILVTDG 166 (168)
T ss_pred ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhcc----CceEEEEecC
Confidence 3444555555432 00123999999976 887655554 1389988764
No 377
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=25.45 E-value=65 Score=29.54 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.3
Q ss_pred ceEEEeCCCCCHHHHHHH
Q 018797 275 LPLYIGDDRTDEDAFKVI 292 (350)
Q Consensus 275 ~vi~~GD~~ND~~Mf~~~ 292 (350)
.++++||+.+|+.+-+.+
T Consensus 186 i~i~vGDs~~DI~aAk~A 203 (237)
T TIGR01672 186 IRIHYGDSDNDITAAKEA 203 (237)
T ss_pred CeEEEeCCHHHHHHHHHC
Confidence 369999999999877776
No 378
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=24.85 E-value=98 Score=31.87 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=42.1
Q ss_pred CEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-C-CEEEEcCCChhhHHhhhc
Q 018797 73 KIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-F-PTAIISGRSREKVMGFVE 129 (350)
Q Consensus 73 ~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~-~v~I~SGR~~~~v~~~~~ 129 (350)
...++.-.||++...... ...+-+...++|++|++. . +++++||.+...+..+++
T Consensus 342 ~~~~~v~~~~~~~g~i~~--~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~ 398 (536)
T TIGR01512 342 KTIVHVARDGTYLGYILL--SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAR 398 (536)
T ss_pred CeEEEEEECCEEEEEEEE--eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHH
Confidence 455666778888764321 234678999999999998 7 899999999988888764
No 379
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=24.66 E-value=1.9e+02 Score=27.82 Aligned_cols=67 Identities=21% Similarity=0.233 Sum_probs=41.6
Q ss_pred HhccCCEEEEEe----cCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CC-----------EEEEcCCChhhHHhhhccc
Q 018797 68 AAKEKKIAVFLN----YDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FP-----------TAIISGRSREKVMGFVELC 131 (350)
Q Consensus 68 ~~~~k~~lif~D----~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~-----------v~I~SGR~~~~v~~~~~l~ 131 (350)
+.+-+.++|++| |||-+.| ++-|.+|+++ +. |.=.|||..++.....+..
T Consensus 189 a~k~r~klv~TDg~FSMDGdiaP--------------l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~v 254 (417)
T KOG1359|consen 189 ACKMRLKLVVTDGVFSMDGDIAP--------------LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDV 254 (417)
T ss_pred hhhheEEEEEecceeccCCCccc--------------HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcc
Confidence 345677888876 6776665 4556677665 32 2335888887766655421
Q ss_pred -------CceEeccCcceEeCCCC
Q 018797 132 -------NVYYAGSHGMDILAPPR 148 (350)
Q Consensus 132 -------~l~~i~~nGa~I~~~~~ 148 (350)
.-.+-+++|.++..|..
T Consensus 255 diinsTLgKAlGga~GGyttgp~~ 278 (417)
T KOG1359|consen 255 DIINSTLGKALGGASGGYTTGPKP 278 (417)
T ss_pred eehhhhhhhhhcCCCCCCccCChh
Confidence 12345688888877653
No 380
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=24.28 E-value=2.3e+02 Score=25.52 Aligned_cols=59 Identities=8% Similarity=-0.000 Sum_probs=35.9
Q ss_pred CcHHHHHHHhccCCEEEEEecC------cccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCCh
Q 018797 60 GSFDKMMKAAKEKKIAVFLNYD------GTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSR 121 (350)
Q Consensus 60 ~~f~~~~~~~~~k~~lif~D~D------GTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 121 (350)
..|.++.+.+...+..+.+|+- +++....- + ..-..++.+.++.+.+. ...+++||+..
T Consensus 108 ~~~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~-~--~~~~~~~~~~~~~l~~~G~d~i~v~~i~~ 173 (243)
T cd04731 108 ELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGG-R--KPTGLDAVEWAKEVEELGAGEILLTSMDR 173 (243)
T ss_pred HHHHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCC-c--eecCCCHHHHHHHHHHCCCCEEEEeccCC
Confidence 3456666656555788888853 55553211 0 11123466777778777 57899988875
No 381
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=23.85 E-value=1.1e+02 Score=28.40 Aligned_cols=43 Identities=16% Similarity=0.311 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEE
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPII 302 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Va 302 (350)
++.|-.+-++|.+++|-+.. .-++|||+..-+.+=+.+ ++++.
T Consensus 212 kvGK~~cFe~I~~Rfg~p~~---~f~~IGDG~eEe~aAk~l-----~wPFw 254 (274)
T TIGR01658 212 KVGKLQCFKWIKERFGHPKV---RFCAIGDGWEECTAAQAM-----NWPFV 254 (274)
T ss_pred hcchHHHHHHHHHHhCCCCc---eEEEeCCChhHHHHHHhc-----CCCeE
Confidence 78999999999999998665 889999998777766666 67765
No 382
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=23.84 E-value=1.6e+02 Score=27.97 Aligned_cols=66 Identities=20% Similarity=0.403 Sum_probs=50.7
Q ss_pred CCCcEEecCCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC
Q 018797 233 YPDFDLSEGKKVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST 306 (350)
Q Consensus 233 ~~~l~v~~g~~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na 306 (350)
||++..+.+ ..+.... +.++..=+..|++.+++.. .++++|-|+-=+.+++.+-.+ ...|++|=|.
T Consensus 70 ~PGf~~t~~--~~~~~~~-n~er~~~~~~ll~~l~i~~----~~i~~gHSrGcenal~la~~~-~~~g~~lin~ 135 (297)
T PF06342_consen 70 YPGFGFTPG--YPDQQYT-NEERQNFVNALLDELGIKG----KLIFLGHSRGCENALQLAVTH-PLHGLVLINP 135 (297)
T ss_pred CCCCCCCCC--CcccccC-hHHHHHHHHHHHHHcCCCC----ceEEEEeccchHHHHHHHhcC-ccceEEEecC
Confidence 566555544 3445555 7799999999999999984 899999999999999988655 3467777664
No 383
>TIGR02129 hisA_euk phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type. This enzyme acts in the biosynthesis of histidine and has been characterized in S. cerevisiae and Arabidopsis where it complements the E. coli HisA gene. In eukaryotes the gene is known as HIS6. In bacteria, this gene is found in Fibrobacter succinogenes, presumably due to lateral gene transfer from plants in the rumen gut.
Probab=23.83 E-value=1.4e+02 Score=27.69 Aligned_cols=44 Identities=11% Similarity=0.041 Sum_probs=29.0
Q ss_pred CCEEEEEec--CcccCCCCCCCCCCCCCHHHHHHHHHHHhcC-CEEEEcCC--ChhhHHhh
Q 018797 72 KKIAVFLNY--DGTLSPIVDDPDRVFMSDEMRAAVREVAKYF-PTAIISGR--SREKVMGF 127 (350)
Q Consensus 72 k~~lif~D~--DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR--~~~~v~~~ 127 (350)
-..++++|+ |||+..+ ..+.++++++.. .-+|+||- +.+.+..+
T Consensus 171 ~~~il~TdI~rDGtl~G~------------dlel~~~l~~~~~ipVIASGGv~s~eDi~~l 219 (253)
T TIGR02129 171 CDEFLIHAADVEGLCKGI------------DEELVSKLGEWSPIPITYAGGAKSIDDLDLV 219 (253)
T ss_pred CCEEEEeeecccCccccC------------CHHHHHHHHhhCCCCEEEECCCCCHHHHHHH
Confidence 456677665 8999873 366777777764 45777775 45556555
No 384
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=23.76 E-value=2.3e+02 Score=25.62 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=16.1
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
...+++..++++|.||-+..
T Consensus 160 ~~l~A~~li~~tdV~GVy~~ 179 (239)
T cd04246 160 AALKADRCEIYTDVDGVYTA 179 (239)
T ss_pred HHcCCCEEEEEECCCCCCCC
Confidence 33467889999999999975
No 385
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=23.75 E-value=1.5e+02 Score=27.07 Aligned_cols=55 Identities=13% Similarity=0.034 Sum_probs=34.2
Q ss_pred HHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHH-HHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 66 MKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMR-AAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 66 ~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~-~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+.+.++.+.++++|.||-+... ...++.=+. +.++++.+.. .+||..+.+++...
T Consensus 159 A~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~~~~~~~l~~~~---~vtgGM~~Kl~~~~ 214 (248)
T cd04252 159 ARVLEPLKIVFLNETGGLLDGT-----GKKISAINLDEEYDDLMKQP---WVKYGTKLKIKEIK 214 (248)
T ss_pred HHHcCCCeEEEEECCcccCCCC-----CCcccccCHHHHHHHHHHcC---CcCCchHHHHHHHH
Confidence 3445678999999999988541 122222222 3444454433 48999999988644
No 386
>PRK02794 DNA polymerase IV; Provisional
Probab=23.50 E-value=4.6e+02 Score=25.93 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEc
Q 018797 216 EEDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRP 249 (350)
Q Consensus 216 ~~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p 249 (350)
.+....+.+.+.+++..| |.+.+.+ ...++||..
T Consensus 108 ~~~y~~~s~~i~~~l~~~sp~ve~~siDe~~ldvt~ 143 (419)
T PRK02794 108 MEKYVRVGREVRAMMQALTPLVEPLSIDEAFLDLSG 143 (419)
T ss_pred HHHHHHHHHHHHHHHHHhCcceeeccCCeEEEeccc
Confidence 344455666777777776 4555544 578999874
No 387
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=23.44 E-value=53 Score=29.77 Aligned_cols=23 Identities=39% Similarity=0.574 Sum_probs=0.0
Q ss_pred HHHHHHcCCCCCCCcceEEEeCCCCC
Q 018797 260 EYLLDTLGLSNPNDVLPLYIGDDRTD 285 (350)
Q Consensus 260 ~~Ll~~lgi~~~~~~~vi~~GD~~ND 285 (350)
+.-++.+|.+++ +++.||||.||
T Consensus 188 e~al~~~gv~p~---~aVMIGDD~~d 210 (262)
T KOG3040|consen 188 ESALQALGVDPE---EAVMIGDDLND 210 (262)
T ss_pred HHHHHhcCCChH---HheEEcccccc
No 388
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=23.25 E-value=1.4e+02 Score=28.65 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=39.3
Q ss_pred cHHHHHHH----hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 018797 61 SFDKMMKA----AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFV 128 (350)
Q Consensus 61 ~f~~~~~~----~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 128 (350)
+.|.+.+. .++.+.++++|.||-+.+. .+|+...++.-+.+.++++..... +.||-...++...+
T Consensus 210 d~D~lAa~lA~~l~AD~LIiLTDVdGVy~~~-~~p~a~~i~~it~~e~~~~~~~g~--~~tGgM~~Kl~AA~ 278 (310)
T TIGR00746 210 DKDLASEKLAEEVNADILVILTDVDAVYINY-GKPDEKALREVTVEELEDYYKAGH--FAAGSMGPKVEAAI 278 (310)
T ss_pred CHHHHHHHHHHHhCCCEEEEEeCCCceeCCC-CCCCCcCCcCcCHHHHHHHHhcCC--cCCCCcHHHHHHHH
Confidence 44555443 3578899999999999864 345544444333334444443332 45788877777654
No 389
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=22.88 E-value=2.3e+02 Score=22.26 Aligned_cols=47 Identities=15% Similarity=0.376 Sum_probs=36.0
Q ss_pred ccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhc
Q 018797 70 KEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 70 ~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 129 (350)
..+..+|++.+.|. +.++.+.++.++++ .+++.+|+.+-..+.+...
T Consensus 52 ~~~d~vi~is~sg~-------------~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ad 99 (131)
T PF01380_consen 52 DPDDLVIIISYSGE-------------TRELIELLRFAKERGAPVILITSNSESPLARLAD 99 (131)
T ss_dssp STTEEEEEEESSST-------------THHHHHHHHHHHHTTSEEEEEESSTTSHHHHHSS
T ss_pred cccceeEeeecccc-------------chhhhhhhHHHHhcCCeEEEEeCCCCCchhhhCC
Confidence 34566777776653 56899999988887 5899999998888877763
No 390
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=22.85 E-value=2e+02 Score=28.28 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=44.6
Q ss_pred CCCcHHHHHHHhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChh
Q 018797 58 ALGSFDKMMKAAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSRE 122 (350)
Q Consensus 58 al~~f~~~~~~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~ 122 (350)
-...++.+.++...|.++|++ +...||..+.++++.+++|-++++...++|++==.|+
T Consensus 149 f~~d~~~l~~~i~~ktk~i~l-------n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~ 206 (393)
T COG0436 149 FKPDLEDLEAAITPKTKAIIL-------NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYE 206 (393)
T ss_pred CcCCHHHHHhhcCccceEEEE-------eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhh
Confidence 345578888777777787775 3456788889999999999999999888888754444
No 391
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=22.61 E-value=1.5e+02 Score=28.38 Aligned_cols=59 Identities=7% Similarity=0.076 Sum_probs=37.9
Q ss_pred HhccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhcCCEEEEcCCChhhHHhhhc
Q 018797 68 AAKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKYFPTAIISGRSREKVMGFVE 129 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 129 (350)
..++.+.++++|.||-+.+.. +|+...++.-+.+.++++.+... +.+|....++...+.
T Consensus 224 ~L~AD~LIiLTdVdGVy~~~~-~p~~~~i~~It~~e~~~~i~~g~--~~~GgM~pKv~AA~~ 282 (313)
T PRK12454 224 ELNADIFIILTDVEKVYLNYG-KPDQKPLDKVTVEEAKKYYEEGH--FKAGSMGPKILAAIR 282 (313)
T ss_pred HcCCCEEEEEeCCceeeCCCC-CCCCeEccccCHHHHHHHHhcCC--cCCCChHHHHHHHHH
Confidence 346889999999999998743 45544444433444555444333 358888888777653
No 392
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=22.56 E-value=1.6e+02 Score=31.39 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=41.8
Q ss_pred hccCCEEEEEecCcccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 018797 69 AKEKKIAVFLNYDGTLSPIVDDPDRVFMSDEMRAAVREVAKY-FPTAIISGRSREKVMGFV 128 (350)
Q Consensus 69 ~~~k~~lif~D~DGTLl~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 128 (350)
+....+.+++-+|++++....= .-.+-++..+++++|++. .+++++||.....+..+.
T Consensus 422 a~~G~r~l~va~~~~~lG~i~l--~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA 480 (675)
T TIGR01497 422 ARQGGTPLVVCEDNRIYGVIYL--KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480 (675)
T ss_pred HhCCCeEEEEEECCEEEEEEEe--cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 3444566666678888763210 113568999999999998 589999999988777765
No 393
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=22.52 E-value=2.4e+02 Score=27.58 Aligned_cols=20 Identities=10% Similarity=0.204 Sum_probs=16.2
Q ss_pred HhccCCEEEEEecCcccCCC
Q 018797 68 AAKEKKIAVFLNYDGTLSPI 87 (350)
Q Consensus 68 ~~~~k~~lif~D~DGTLl~~ 87 (350)
...+...++++|.||-+...
T Consensus 163 ~l~Ad~LiilTDVdGVy~~d 182 (372)
T PRK05429 163 LVEADLLILLTDVDGLYTAD 182 (372)
T ss_pred HcCCCEEEEecCCCeeEcCC
Confidence 34678899999999999863
No 394
>PRK03352 DNA polymerase IV; Validated
Probab=21.97 E-value=7e+02 Score=23.77 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcC
Q 018797 217 EDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPS 250 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~ 250 (350)
+......+++.+++..| |.+.+.+ ...++|+...
T Consensus 83 ~~y~~~s~~i~~~l~~~s~~ve~~siDe~~ld~t~~ 118 (346)
T PRK03352 83 AAYDAASEEVMATLRDLGVPVEVWGWDEAFLGVDTD 118 (346)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEecCccEEEeCCCC
Confidence 33445566666777666 4455544 5677888753
No 395
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=21.63 E-value=1.2e+02 Score=27.79 Aligned_cols=40 Identities=23% Similarity=0.211 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCC---------CHHHHHHHH
Q 018797 252 EWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRT---------DEDAFKVIK 293 (350)
Q Consensus 252 ~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N---------D~~Mf~~~~ 293 (350)
+..|-.|++ ++..||+.++ ++-++||+=... +++||+.+-
T Consensus 122 Na~k~HA~r-~Lk~LGieDc-Fegii~~e~~np~~~~~vcKP~~~afE~a~ 170 (244)
T KOG3109|consen 122 NAYKVHAIR-ILKKLGIEDC-FEGIICFETLNPIEKTVVCKPSEEAFEKAM 170 (244)
T ss_pred CCcHHHHHH-HHHHhChHHh-ccceeEeeccCCCCCceeecCCHHHHHHHH
Confidence 568888865 4677899876 668888886542 577887774
No 396
>cd03586 PolY_Pol_IV_kappa DNA Polymerase IV/Kappa. Pol IV, also known as Pol kappa, DinB, and Dpo4, is a translesion synthesis (TLS) polymerase. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Known primarily as Pol IV in prokaryotes and Pol kappa in eukaryotes, this polymerase has a propensity for generating frameshift mutations. The eukaryotic Pol kappa differs from Pol IV and Dpo4 by an N-terminal extension of ~75 residues known as the "N-clasp" region. The structure of Pol kappa shows DNA that is almost totally encircled by Pol kappa, with the N-clasp region augmenting the interactions between DNA and the polymerase. Pol kappa is more resistant than Pol eta and Pol iota to bulky guanine adducts and is efficient at catalyzing the incorporation of dCTP. Bacterial pol IV has a
Probab=21.60 E-value=1.6e+02 Score=27.91 Aligned_cols=61 Identities=13% Similarity=0.322 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHHHHhhC-CCcEEec-CCeEEEEEcCC-CC----CHHHHHHHHH-HHcCCCCCCCcceEEEeCC
Q 018797 217 EDYSILQEKAKAVLRNY-PDFDLSE-GKKVMEIRPSI-EW----DKGHALEYLL-DTLGLSNPNDVLPLYIGDD 282 (350)
Q Consensus 217 ~~~~~~~~~l~~~l~~~-~~l~v~~-g~~~lEI~p~~-~~----~KG~Al~~Ll-~~lgi~~~~~~~vi~~GD~ 282 (350)
+....+.+.+.+++..| |.+.+.+ ...++|+.... -. .=...++.-+ +.+|++ -.+.+|++
T Consensus 72 ~~y~~~s~~i~~~l~~~~~~ve~~s~De~~ldv~~~~~~~~~~~~la~~ir~~i~~~~g~~-----~siGia~n 140 (334)
T cd03586 72 DKYREVSRQIMEILREYTPLVEPLSIDEAYLDVTDYVRLFGSATEIAKEIRARIREETGLT-----ASAGIAPN 140 (334)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEecccceeEccccccccCCCHHHHHHHHHHHHHHHHCCc-----eEEEEhhc
Confidence 33455666777777776 4566654 57889987530 01 1122333222 456766 55777775
No 397
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=21.54 E-value=1.4e+02 Score=29.42 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=49.8
Q ss_pred CcEEecCC-----eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCCCCC
Q 018797 235 DFDLSEGK-----KVMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSSTPKE 309 (350)
Q Consensus 235 ~l~v~~g~-----~~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na~~~ 309 (350)
++.+.+|+ -.+|++|+ |++ |..++++|+..+|... .--++||.- ++. -=||-+|.-.-
T Consensus 341 Gy~lvtgGTDnHlvLvDLr~~-G~d-GarvE~vle~~~I~~N---KNtvpGD~S-------al~----PgGiRiGtPAm- 403 (477)
T KOG2467|consen 341 GYKLVTGGTDNHLVLVDLRPK-GVD-GARVEKVLELCHIALN---KNTVPGDKS-------ALS----PGGIRIGTPAM- 403 (477)
T ss_pred CceEecCCccceEEEEecccc-CCc-hHHHHHHHHHhhhhhc---CCcCCCCcc-------ccC----CCceeccchhh-
Confidence 57765543 25899999 887 7788999999999865 556788852 111 11555543111
Q ss_pred ccceEEeCCHHHHHHHHHHHHhc
Q 018797 310 TKASYSLNDPSEVLTFLLRLSRW 332 (350)
Q Consensus 310 t~A~y~l~~~~eV~~~L~~l~~~ 332 (350)
|.--+.-.|-..|.+||.+-+.+
T Consensus 404 TsRG~~e~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 404 TSRGFGEEDFEKVADFIDRAVKI 426 (477)
T ss_pred cccCccHHHHHHHHHHHHHHHHH
Confidence 22222223556788888776654
No 398
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=21.38 E-value=1.6e+02 Score=27.51 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=25.8
Q ss_pred EEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHH
Q 018797 247 IRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAF 289 (350)
Q Consensus 247 I~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf 289 (350)
.++. +-+|....+.|.+.++ -+++|||..+|+.-+
T Consensus 170 lr~~-~~~K~~rr~~I~~~y~-------Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 170 LKKD-KSSKESRRQKVQKDYE-------IVLLFGDNLLDFDDF 204 (266)
T ss_pred eCCC-CCCcHHHHHHHHhcCC-------EEEEECCCHHHhhhh
Confidence 4444 5678888887776443 589999999998654
No 399
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=21.27 E-value=4.1e+02 Score=23.82 Aligned_cols=79 Identities=24% Similarity=0.134 Sum_probs=50.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcceEEEeCCCC--CHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCHHH
Q 018797 244 VMEIRPSIEWDKGHALEYLLDTLGLSNPNDVLPLYIGDDRT--DEDAFKVIKGRGQGYPIIVSSTPKETKASYSLNDPSE 321 (350)
Q Consensus 244 ~lEI~p~~~~~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~N--D~~Mf~~~~~~~~g~~Vav~na~~~t~A~y~l~~~~e 321 (350)
.+.|.-++|..|-.-++.+++.|.-... ..+.-||=.+ |-+.+.. + .|-.+...+..+ .+ + .|.+=
T Consensus 15 ~i~v~Gp~GSGKTaLie~~~~~L~~~~~---~aVI~~Di~t~~Da~~l~~--~--~g~~i~~v~TG~---~C-H-~da~m 82 (202)
T COG0378 15 RIGVGGPPGSGKTALIEKTLRALKDEYK---IAVITGDIYTKEDADRLRK--L--PGEPIIGVETGK---GC-H-LDASM 82 (202)
T ss_pred EEEecCCCCcCHHHHHHHHHHHHHhhCC---eEEEeceeechhhHHHHHh--C--CCCeeEEeccCC---cc-C-CcHHH
Confidence 4455544599999999999999865544 8888999665 5554544 1 155544333221 11 1 34455
Q ss_pred HHHHHHHHHhccc
Q 018797 322 VLTFLLRLSRWRK 334 (350)
Q Consensus 322 V~~~L~~l~~~~~ 334 (350)
+...|++|..|-.
T Consensus 83 ~~~ai~~l~~~~~ 95 (202)
T COG0378 83 NLEAIEELVLDFP 95 (202)
T ss_pred HHHHHHHHhhcCC
Confidence 7788888877743
No 400
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=21.18 E-value=1.8e+02 Score=26.46 Aligned_cols=20 Identities=15% Similarity=0.453 Sum_probs=16.1
Q ss_pred HHhccCCEEEEEecCcccCC
Q 018797 67 KAAKEKKIAVFLNYDGTLSP 86 (350)
Q Consensus 67 ~~~~~k~~lif~D~DGTLl~ 86 (350)
...++.+.++++|.||-+..
T Consensus 165 ~~l~A~~l~~~tDV~GVy~~ 184 (244)
T cd04260 165 AALNAEYVEIYTDVDGIMTA 184 (244)
T ss_pred HHcCCCEEEEEECCCcCCcC
Confidence 34567888899999999975
No 401
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=21.13 E-value=39 Score=28.06 Aligned_cols=71 Identities=20% Similarity=0.279 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCcceEEEeCCCCCHHHHHHHHhCCCceEEEEcCC------C------CC--ccceEEeCCH
Q 018797 254 DKGHALEYLLDTLGLSNPNDVLPLYIGDDRTDEDAFKVIKGRGQGYPIIVSST------P------KE--TKASYSLNDP 319 (350)
Q Consensus 254 ~KG~Al~~Ll~~lgi~~~~~~~vi~~GD~~ND~~Mf~~~~~~~~g~~Vav~na------~------~~--t~A~y~l~~~ 319 (350)
.||.-+..|.-+..+..+ +.-++-|||.+--... .+..||.++++.. + ++ ..|.-++.+|
T Consensus 56 ~k~a~iN~iRT~~li~~a-DvVVvrFGekYKQWNa-----AfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~ 129 (141)
T PF11071_consen 56 HKGAKINAIRTRTLIEKA-DVVVVRFGEKYKQWNA-----AFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETP 129 (141)
T ss_pred chhhhhhHHHHHHHHhhC-CEEEEEechHHHHHHH-----HhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCH
Confidence 344445555555555543 4578899997632111 1111444333332 1 12 3677788899
Q ss_pred HHHHHHHHHHH
Q 018797 320 SEVLTFLLRLS 330 (350)
Q Consensus 320 ~eV~~~L~~l~ 330 (350)
+.|.+.|+-++
T Consensus 130 ~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 130 EQVVEILRYVL 140 (141)
T ss_pred HHHHHHHHHHh
Confidence 99999998665
Done!