Query 018798
Match_columns 350
No_of_seqs 165 out of 770
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 06:13:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018798.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018798hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cxla3 b.71.1.1 (A:407-496) C 17.7 45 0.0033 23.7 3.2 32 14-45 3-34 (90)
2 d1va4a_ c.69.1.12 (A:) Arylest 13.6 94 0.0068 23.5 4.6 60 259-323 1-62 (271)
3 d1cyga3 b.71.1.1 (A:403-491) C 13.3 69 0.005 22.6 3.2 32 14-45 3-34 (89)
4 d3bmva3 b.71.1.1 (A:407-495) C 12.9 1.1E+02 0.0084 21.3 4.3 32 14-45 3-34 (89)
5 d1fh9a_ c.1.8.3 (A:) Xylanase 11.0 21 0.0015 30.5 -0.6 48 263-315 76-127 (312)
6 d1i1wa_ c.1.8.3 (A:) Xylanase 11.0 18 0.0013 31.2 -1.1 26 292-317 104-130 (303)
7 d1d7ya3 d.87.1.1 (A:309-405) N 10.7 60 0.0044 22.7 2.1 11 267-277 7-17 (97)
8 d1ta3b_ c.1.8.3 (B:) Xylanase 9.9 23 0.0017 30.2 -0.7 22 293-314 102-127 (301)
9 d2gycb1 b.43.3.2 (B:1-209) Rib 9.8 1.3E+02 0.0098 24.0 4.4 37 233-269 156-194 (209)
10 d2cuqa1 g.39.1.3 (A:43-74) Fou 9.5 28 0.002 20.0 -0.2 16 226-243 9-24 (32)
No 1
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]}
Probab=17.69 E-value=45 Score=23.65 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=25.0
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 018798 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (350)
Q Consensus 14 ~~~L~~~~~~~~i~~~~~~~~~~L~Idr~~g~ 45 (350)
.-++|..+|.|+++..-+.+...++|+|...+
T Consensus 3 ~~~rw~~~DvyvyeR~~g~~~vlVAiNr~~~~ 34 (90)
T d1cxla3 3 TQERWINNDVLIYERKFGSNVAVVAVNRNLNA 34 (90)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred cEEEEECCCEEEEEEEcCCCEEEEEEECCCCC
Confidence 45789999999999875544567899997544
No 2
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=13.56 E-value=94 Score=23.49 Aligned_cols=60 Identities=13% Similarity=0.031 Sum_probs=38.0
Q ss_pred EEEEEeecCcceeEeEecCCCCCCceEEe-cCCCcHHHHHHHHHHHHHhcC-CeEEEECcCCCCccc
Q 018798 259 ASFVQVRGSIPFLWEQTVDLTYKPKFEIL-RAEEAPRVVERHFLDLRKKYG-NVLAVDLVNKPMHFY 323 (350)
Q Consensus 259 ~SfvQiRGSVPlfWsQ~~~l~~kP~i~i~-~~~~~~~a~~~HF~~l~~~YG-~i~iVNLl~~kg~E~ 323 (350)
+|||.+.| +.++|.+..+ .|++.+. +...+...+..-.+.|.++ | .++++++-+...++.
T Consensus 1 s~f~~~dG-~~l~y~~~G~---g~~vv~lHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~ 62 (271)
T d1va4a_ 1 STFVAKDG-TQIYFKDWGS---GKPVLFSHGWLLDADMWEYQMEYLSSR-GYRTIAFDRRGFGRSDQ 62 (271)
T ss_dssp CEEECTTS-CEEEEEEESS---SSEEEEECCTTCCGGGGHHHHHHHHTT-TCEEEEECCTTSTTSCC
T ss_pred CEEEeECC-eEEEEEEEcC---CCeEEEECCCCCCHHHHHHHHHHHHhC-CCEEEEEeccccccccc
Confidence 47888888 9999998753 3666654 3333444455445555554 3 588899987644443
No 3
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=13.35 E-value=69 Score=22.57 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=24.9
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 018798 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (350)
Q Consensus 14 ~~~L~~~~~~~~i~~~~~~~~~~L~Idr~~g~ 45 (350)
.-++|..+|.|+++...+.+...++|+|...+
T Consensus 3 ~~~rwi~~DvyvyeR~fg~~~vlVAiNr~~~~ 34 (89)
T d1cyga3 3 TEQRWINGDVYVYERQFGKDVVLVAVNRSSSS 34 (89)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred eeEEEECCCEEEEEEecCCcEEEEEEECCCCC
Confidence 45789999999999876544567899997544
No 4
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}
Probab=12.94 E-value=1.1e+02 Score=21.29 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=24.9
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 018798 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (350)
Q Consensus 14 ~~~L~~~~~~~~i~~~~~~~~~~L~Idr~~g~ 45 (350)
.-++|..+|.|+++...+.+...++|+|...+
T Consensus 3 ~~~~~in~DvyvyeR~~~~~~vlVAiNr~~~~ 34 (89)
T d3bmva3 3 TQQRWINNDVYIYERKFGNNVALVAINRNLST 34 (89)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred eeEEEECCCEEEEEEecCCcEEEEEEECCCCC
Confidence 34789999999999876654567899997644
No 5
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]}
Probab=11.02 E-value=21 Score=30.50 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=29.9
Q ss_pred EeecCcceeEeEecCCCCCCceEEecCCCcHHHHHHHHHHHHHhcCC-eE---EEEC
Q 018798 263 QVRGSIPFLWEQTVDLTYKPKFEILRAEEAPRVVERHFLDLRKKYGN-VL---AVDL 315 (350)
Q Consensus 263 QiRGSVPlfWsQ~~~l~~kP~i~i~~~~~~~~a~~~HF~~l~~~YG~-i~---iVNL 315 (350)
-+||-+|+.++|.+.... . ...++...++..|+..+.++|++ +. |+|=
T Consensus 76 ~v~gh~lvw~~~~p~~~~--~---~~~~~~~~~~~~~i~~v~~ry~g~i~~WdV~NE 127 (312)
T d1fh9a_ 76 ELYGHTLVWHSQLPDWAK--N---LNGSAFESAMVNHVTKVADHFEGKVASWDVVNE 127 (312)
T ss_dssp EEEEEEEEESSSCCHHHH--T---CCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEC
T ss_pred EEEEeccccccccccccc--c---cchHHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 368887776666543211 0 01223347789999999999987 43 6663
No 6
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]}
Probab=11.01 E-value=18 Score=31.20 Aligned_cols=26 Identities=31% Similarity=0.488 Sum_probs=18.9
Q ss_pred cHHHHHHHHHHHHHhcCC-eEEEECcC
Q 018798 292 APRVVERHFLDLRKKYGN-VLAVDLVN 317 (350)
Q Consensus 292 ~~~a~~~HF~~l~~~YG~-i~iVNLl~ 317 (350)
...+++.|+..+..+|++ +...+.+|
T Consensus 104 ~~~~~~~~i~~v~~rY~g~i~~WdVvN 130 (303)
T d1i1wa_ 104 LTNVMKNHITTLMTRYKGKIRAWDVVN 130 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCchhhhcc
Confidence 346789999999999976 54444443
No 7
>d1d7ya3 d.87.1.1 (A:309-405) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=10.68 E-value=60 Score=22.73 Aligned_cols=11 Identities=18% Similarity=0.785 Sum_probs=8.7
Q ss_pred CcceeEeEecC
Q 018798 267 SIPFLWEQTVD 277 (350)
Q Consensus 267 SVPlfWsQ~~~ 277 (350)
.||-|||..-+
T Consensus 7 ~vP~FWSdQ~d 17 (97)
T d1d7ya3 7 ELPWYWSDQGA 17 (97)
T ss_dssp CCCEEEEEETT
T ss_pred CCCcEEeccCC
Confidence 58999998643
No 8
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}
Probab=9.87 E-value=23 Score=30.24 Aligned_cols=22 Identities=18% Similarity=0.469 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhcCC-eE---EEE
Q 018798 293 PRVVERHFLDLRKKYGN-VL---AVD 314 (350)
Q Consensus 293 ~~a~~~HF~~l~~~YG~-i~---iVN 314 (350)
...+.+|+..+..+|++ +. |||
T Consensus 102 ~~~~~~~I~~v~~rY~g~i~~WDVvN 127 (301)
T d1ta3b_ 102 RSVMTNHINEVVGRYKGKIMHWDVVN 127 (301)
T ss_dssp HHHHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcceEEeec
Confidence 46789999999999975 54 555
No 9
>d2gycb1 b.43.3.2 (B:1-209) Ribosomal protein L3 {Escherichia coli [TaxId: 562]}
Probab=9.85 E-value=1.3e+02 Score=23.99 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=27.2
Q ss_pred cccCCCCCceeeeEEEeEEE--eeCCeeEEEEEeecCcc
Q 018798 233 RRGADSDGYVANFVETEQVV--QMNGFMASFVQVRGSIP 269 (350)
Q Consensus 233 ~RGiD~~G~vANfVETEqIv--~~~~~~~SfvQiRGSVP 269 (350)
..|.---|+-.|.--||+=+ ..=+.-..|+-++||||
T Consensus 156 ~~g~~maG~mG~~~~T~~n~~I~~Id~~~n~i~vkGsVP 194 (209)
T d2gycb1 156 FKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVP 194 (209)
T ss_dssp CSSSCCCCCCCCCEEEEEEEEEEECCSSSSEEEEESCCS
T ss_pred eeccccCCccCCceEEEecCEEEEEeCCCCEEEEEecCc
Confidence 36777789999999999832 22123346899999997
No 10
>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.53 E-value=28 Score=19.97 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=11.0
Q ss_pred CCCcccccccCCCCCcee
Q 018798 226 RNGTRMWRRGADSDGYVA 243 (350)
Q Consensus 226 raGtRy~~RGiD~~G~vA 243 (350)
-||.||..| |+.-+++
T Consensus 9 LaGqrFTSr--de~pYC~ 24 (32)
T d2cuqa1 9 LAGQQFTSR--DEDPYCV 24 (32)
T ss_dssp CTTCCEEEC--SSSEEEH
T ss_pred ccCCccccC--CCCccHH
Confidence 489999998 5554444
Done!