Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018799
MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIW
DLFKKQDPDLVVESMSQPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSN
TTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYG
KPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRR
NFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLSWQRNIIQTFMYWQ
LLKLMYHAPVSAGYHQSVWAKIGRTVNPLVYRYAPFLNTPISAIQRWWLR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018799
        (350 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2076874 - symbol:AT3G02420 "AT3G02420" species...  1272  1.2e-129  1


>TAIR|locus:2076874 [details] [associations]
            symbol:AT3G02420 "AT3G02420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            InterPro:IPR005344 Pfam:PF03661 GO:GO:0005783 GO:GO:0016021
            GO:GO:0009506 EMBL:AC021640 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0016020 EMBL:AF380625 EMBL:AY056084 EMBL:AY085605
            IPI:IPI00526967 RefSeq:NP_566171.1 UniGene:At.24531 IntAct:Q9M898
            STRING:Q9M898 PaxDb:Q9M898 PRIDE:Q9M898 EnsemblPlants:AT3G02420.1
            GeneID:821152 KEGG:ath:AT3G02420 TAIR:At3g02420 eggNOG:NOG295209
            HOGENOM:HOG000005885 InParanoid:Q9M898 OMA:QRYIDPD PhylomeDB:Q9M898
            ProtClustDB:CLSN2687999 Genevestigator:Q9M898 Uniprot:Q9M898
        Length = 348

 Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
 Identities = 240/359 (66%), Positives = 273/359 (76%)

Query:     1 MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIW 60
             M E  EDSQ++K+IAAAA+DY+ND RWADYWSNILIPPHMA+R +VVDH+KRKFYQRYI 
Sbjct:     1 MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYI- 59

Query:    61 DLFKKQDPDLVVESMS---------QPTQXXXXXXXXXXXNDRPRQRNSAXXXXXXXXXX 111
                   DPDLVVE MS         +PT            N++ R RNS           
Sbjct:    60 ------DPDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSA 113

Query:   112 XXXXXXXXXXXXVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSS 171
                         +RWD QTIQFSVNAWVFV+A+LA+ PLIP+NLSNRAYRLSFMGTACSS
Sbjct:   114 TTGATPSS----MRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSS 169

Query:   172 IYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSV 231
             +YSLYSLYG+PRAWNMQ LQVYFQSI+A KDFIYFIYCL+FVTSHLCLKFALIPILCR++
Sbjct:   170 LYSLYSLYGRPRAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRAL 229

Query:   232 EHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEXXXXXXXXXXXXXWQRN 291
             E VAKFLRRNF RS +YRKYLED CVWVESN+TTL+IL+S AE             WQRN
Sbjct:   230 EQVAKFLRRNFGRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRN 289

Query:   292 IIQTFMYWQLLKLMYHAPVSAGYHQSVWAKIGRTVNPLVYRYAPFLNTPISAIQRWWLR 350
             IIQTFMYWQLLKLMY APV+AGYHQS W++IGRTV P++ RYAPFLNTP+SA+QRWW R
Sbjct:   290 IIQTFMYWQLLKLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 348


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.136   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      350       304   0.00098  115 3  11 22  0.43    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  257 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.97u 0.10s 21.07t   Elapsed:  00:00:01
  Total cpu time:  20.97u 0.10s 21.07t   Elapsed:  00:00:01
  Start:  Fri May 10 05:09:48 2013   End:  Fri May 10 05:09:49 2013

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