Query 018799
Match_columns 350
No_of_seqs 119 out of 163
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 04:07:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018799.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018799hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03661 UPF0121: Uncharacteri 100.0 2.9E-48 6.3E-53 366.5 23.6 209 128-347 24-233 (247)
2 KOG4002 Uncharacterized integr 100.0 7.7E-32 1.7E-36 252.5 18.2 195 129-338 39-242 (264)
3 PF12238 MSA-2c: Merozoite sur 79.6 13 0.00027 35.2 8.8 8 52-59 87-94 (205)
4 PF12238 MSA-2c: Merozoite sur 77.1 8 0.00017 36.5 6.7 10 50-59 106-115 (205)
5 KOG2927 Membrane component of 40.7 40 0.00086 34.4 4.4 49 127-175 184-235 (372)
6 KOG2130 Phosphatidylserine-spe 32.0 37 0.00081 34.4 2.7 19 48-71 314-332 (407)
7 PF04173 DoxD: TQO small subun 30.9 2E+02 0.0043 26.4 7.0 35 268-302 69-103 (167)
8 KOG3533 Inositol 1,4,5-trispho 30.6 1.1E+03 0.024 29.1 14.0 27 45-74 2097-2123(2706)
9 KOG1734 Predicted RING-contain 30.4 1.8E+02 0.0039 29.0 7.0 80 131-216 102-194 (328)
10 PF07681 DoxX: DoxX; InterPro 25.4 1.1E+02 0.0024 23.5 3.9 34 263-296 41-74 (85)
11 PHA03309 transcriptional regul 25.3 1E+02 0.0023 35.3 4.8 8 123-130 1873-1880(2033)
12 PF13210 DUF4018: Domain of un 23.7 5.9E+02 0.013 23.6 8.6 83 245-330 70-166 (192)
13 smart00222 Sec7 Sec7 domain. D 22.7 91 0.002 28.4 3.3 58 2-59 58-118 (187)
No 1
>PF03661 UPF0121: Uncharacterised protein family (UPF0121); InterPro: IPR005344 Uncharacterised integral membrane protein family.; GO: 0016021 integral to membrane
Probab=100.00 E-value=2.9e-48 Score=366.47 Aligned_cols=209 Identities=27% Similarity=0.416 Sum_probs=184.2
Q ss_pred chhhhHHHHHHHHHHHHHhhccccccCcchHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHhHHHHHHHHhccCchHHHH
Q 018799 128 RQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFI 207 (350)
Q Consensus 128 ~~t~~F~~~awvl~~a~l~i~P~~~~~~s~~~YR~allgaa~s~gi~lyq~~g~p~~~n~~~~~~~lq~ll~ddn~qYLl 207 (350)
-++..|..+.|+++++++|++|+++.+..+.+||.+++|++++|||++||+++++++ .++++++++.|||+|||+
T Consensus 24 lq~~~f~~~~~~l~~~~~y~l~~~~~~~~~~~Y~~all~~a~t~~i~l~q~~~~~~~-----~~~~l~~ll~ddn~~YL~ 98 (247)
T PF03661_consen 24 LQFAWFLGHVFTLLCSLLYILPILFFSLAYSAYRKALLGAAATYAIVLYQRLPRFQF-----SRAYLQRLLLDDNFQYLL 98 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHhcccccc-----cHHHHHHHHhcCcHHHHH
Confidence 388899999999999999999998766566799999999999999999999997665 567999999999999999
Q ss_pred HHHHHHHhcccchhhhhhHHHHHHHHHHHHHHHhcCccHHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 018799 208 YCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYR-KYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLL 286 (350)
Q Consensus 208 ~aLifl~s~~p~~laLlP~~lfSlfHvaty~r~~l~~~~l~~-k~~~~~~~~V~~n~~~~m~lvA~~EI~l~~~LIl~lf 286 (350)
||++|++++ |++++|+|+++||+||+++|+++++.+..... .+.+.+++||++|++++|+++|++||++++++|+++|
T Consensus 99 ~al~fl~~~-p~~~~llP~~lfSlfHv~ty~~~~l~~~~~~~~~~~~~i~~~v~~~~~~~m~~~A~~Ei~l~~~li~~lf 177 (247)
T PF03661_consen 99 YALIFLFSP-PITLALLPFFLFSLFHVATYLRKLLPPTGPNSSPLARSIISFVKQNNDKIMRLVANIEIFLLPLLIFMLF 177 (247)
T ss_pred HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999997 89999999999999999999999864321111 1222256889999999999999999999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhhhhhhhccCCCCCCchhhhhhc
Q 018799 287 SWQRNIIQTFMYWQLLKLMYHAPVSAGYHQSVWAKIGRTVNPLVYRYAPFLNTPISAIQRW 347 (350)
Q Consensus 287 t~rrSii~~fiY~~FLrlRY~sp~~S~ytR~af~~l~~~id~li~~~~P~l~tp~~~~q~W 347 (350)
++++||+++++|++|||+||++ ++|+|+|++|+++++++|+++++. +.|+..++.|
T Consensus 178 ~~~~s~i~~~iY~~FLklRY~~-~~s~y~r~~f~~l~~~id~~v~hp----~~P~~v~~~~ 233 (247)
T PF03661_consen 178 FGRRSIILPFIYYQFLKLRYAS-SRSPYTRSAFAQLRVRIDGLVSHP----SCPPFVRQVY 233 (247)
T ss_pred HccchHHHHHHHHHHHHHHHhC-CCCcHHHHHHHHHHHHHHHHHcCC----CCCHHHHHHH
Confidence 9999999999999999999996 469999999999999999999877 6666666554
No 2
>KOG4002 consensus Uncharacterized integral membrane protein [Function unknown]
Probab=99.98 E-value=7.7e-32 Score=252.53 Aligned_cols=195 Identities=21% Similarity=0.378 Sum_probs=162.7
Q ss_pred hhhhHHHHHHHHHHHHHhhccccccCcchHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHhHHHHHHHHhccCchHHHHH
Q 018799 129 QTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIY 208 (350)
Q Consensus 129 ~t~~F~~~awvl~~a~l~i~P~~~~~~s~~~YR~allgaa~s~gi~lyq~~g~p~~~n~~~~~~~lq~ll~ddn~qYLl~ 208 (350)
...++.+..-.+.+++.|++|+.+.+.+. .++ .+++.+.+++.+++|+...- . .++.++++++.||||||++|
T Consensus 39 ~s~L~alr~~~fy~s~~y~~~~~~f~~~~-~~~-~~l~na~t~al~l~qr~~~~-~----l~~~f~arli~eds~~Ylv~ 111 (264)
T KOG4002|consen 39 SSVLYALRLSTFYFSVTYLIPLYGFGKIA-SQK-FFLANAATSALRLHQRLAMF-A----LNKLFLARLIIEDSVHYLVY 111 (264)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HHH-HHHHHhHhhhhhHHHHHhHH-H----HHHHHHHHHHHccchHHHHH
Confidence 44455555555578999999987643322 255 68889999999999998643 2 25679999999999999999
Q ss_pred HHHHHHhcccchhhhhhHHHHHHHHHHHHHHHhc---Cc--cHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHH
Q 018799 209 CLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNF---SR--SILYRKYLEDACVWVESNS--TTLSILTSHAEIGLGFLL 281 (350)
Q Consensus 209 aLifl~s~~p~~laLlP~~lfSlfHvaty~r~~l---~~--~~l~~k~~~~~~~~V~~n~--~~~m~lvA~~EI~l~~~L 281 (350)
+++|++.+ |+.+.|+|+++|+++|+++|+++.+ +. ++..+..+++ ++.++ +.+|.++|+.||++++++
T Consensus 112 slifl~~~-p~~~sL~P~l~ya~lH~~ty~~kvL~~~~~ns~~~~~s~i~~----f~~q~~~q~~l~~va~~eifll~~l 186 (264)
T KOG4002|consen 112 SLIFLFLR-PFSFSLLPVLIYAVLHASTYLNKVLLVIGQNSSGFFLSMISK----FEAQYTLQNALKLVAFNEIFLLPRL 186 (264)
T ss_pred HHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 99999998 8999999999999999999999965 33 4555555555 34444 899999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhhhhhhhc-cCC-CCC
Q 018799 282 IISLLSWQRNIIQTFMYWQLLKLMYHAPVSAGYHQSVWAKIGRTVNPLVYR-YAP-FLN 338 (350)
Q Consensus 282 Il~lft~rrSii~~fiY~~FLrlRY~sp~~S~ytR~af~~l~~~id~li~~-~~P-~l~ 338 (350)
+.++|.+++|++.+++|++||||||. +|+|+|++|+|++.++|++++| .|| +++
T Consensus 187 ~~~iF~~~gsll~~v~Y~~Fl~LRY~---rs~y~R~aFaq~rlrmd~~vs~~s~Ppfik 242 (264)
T KOG4002|consen 187 FFLIFSGKGSLLAPVIYYRFLKLRYR---RSPYMRAAFAQLRLRMDALVSRPSCPPFIK 242 (264)
T ss_pred HHHHHhccchhhhHhhHhhheeeeec---CChhHHHHHHHHHHHHHHHHcCCCCChHHH
Confidence 99999999999999999999999997 9999999999999999999988 444 444
No 3
>PF12238 MSA-2c: Merozoite surface antigen 2c; InterPro: IPR021060 This family of proteins are restricted to the apicomplexan Babesia bovis. Proteins in this entry are typically between 263 and 318 amino acids in length and plasma membrane glycoproteins. These antigens present on the merozoite surface (MSA) and are involved in the parasite invasion of the bovine erythrocyte. MSA-2c has been suggested as a possible antigen for a vaccine candidate [].
Probab=79.55 E-value=13 Score=35.17 Aligned_cols=8 Identities=38% Similarity=0.912 Sum_probs=5.1
Q ss_pred HHHHHHHh
Q 018799 52 RKFYQRYI 59 (350)
Q Consensus 52 ~k~y~~~i 59 (350)
+||||+||
T Consensus 87 ~~YyKkhI 94 (205)
T PF12238_consen 87 TKYYKKHI 94 (205)
T ss_pred HHHHHHhc
Confidence 35667776
No 4
>PF12238 MSA-2c: Merozoite surface antigen 2c; InterPro: IPR021060 This family of proteins are restricted to the apicomplexan Babesia bovis. Proteins in this entry are typically between 263 and 318 amino acids in length and plasma membrane glycoproteins. These antigens present on the merozoite surface (MSA) and are involved in the parasite invasion of the bovine erythrocyte. MSA-2c has been suggested as a possible antigen for a vaccine candidate [].
Probab=77.12 E-value=8 Score=36.45 Aligned_cols=10 Identities=20% Similarity=0.358 Sum_probs=7.1
Q ss_pred HHHHHHHHHh
Q 018799 50 YKRKFYQRYI 59 (350)
Q Consensus 50 ~k~k~y~~~i 59 (350)
.--||++.++
T Consensus 106 ~lv~~ck~Fl 115 (205)
T PF12238_consen 106 GLVKFCKDFL 115 (205)
T ss_pred HHHHHHHHHh
Confidence 3457888888
No 5
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.66 E-value=40 Score=34.42 Aligned_cols=49 Identities=35% Similarity=0.562 Sum_probs=25.0
Q ss_pred cchhhhHHHHHHHHHHHHHhh--ccccccCcchHHHHHHH-HHHHHHHHHHH
Q 018799 127 DRQTIQFSVNAWVFVVAMLAI--FPLIPRNLSNRAYRLSF-MGTACSSIYSL 175 (350)
Q Consensus 127 d~~t~~F~~~awvl~~a~l~i--~P~~~~~~s~~~YR~al-lgaa~s~gi~l 175 (350)
||+...-.+.+.+++++++++ +|+-|...-...|.++. .|+++++.++|
T Consensus 184 ep~~~~~~vl~~~fvl~tlaivLFPLWP~~mR~gvyY~sig~~gfl~~IlvL 235 (372)
T KOG2927|consen 184 EPRPLMWQVLGVLFVLVTLAIVLFPLWPRRMRQGVYYLSIGAGGFLAFILVL 235 (372)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhcccCcHHHhcceeeeecchhHHHHHHHHH
Confidence 566665555555555555553 67766544333444455 33344444443
No 6
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=31.95 E-value=37 Score=34.40 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhhhcccCCCCcc
Q 018799 48 DHYKRKFYQRYIWDLFKKQDPDLV 71 (350)
Q Consensus 48 ~~~k~k~y~~~i~~~~~~~Dp~~~ 71 (350)
-|+-+||++. ++.||||+.
T Consensus 314 pkls~~w~~~-----L~~~~pel~ 332 (407)
T KOG2130|consen 314 PKLSRKWARL-----LALQRPELA 332 (407)
T ss_pred cchhhHHHHH-----HhhcChhHH
Confidence 3667778764 457899984
No 7
>PF04173 DoxD: TQO small subunit DoxD; InterPro: IPR007301 P97207 from SWISSPROT is a subunit of the terminal quinol oxidase present in the plasma membrane of Acidianus ambivalens, with calculated molecular mass of 20.4 kDa []. Thiosulphate:quinone oxidoreductase (TQO) is one of the early steps in elemental sulphur oxidation. A novel TQO enzyme was purified from the thermo-acidophilic archaeon A. ambivalens and shown to consist of a large subunit (DoxD) and a smaller subunit (DoxA). The DoxD- and DoxA-like two subunits are fused together in a single polypeptide in Q8AAF0 from SWISSPROT.
Probab=30.93 E-value=2e+02 Score=26.40 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 018799 268 ILTSHAEIGLGFLLIISLLSWQRNIIQTFMYWQLL 302 (350)
Q Consensus 268 ~lvA~~EI~l~~~LIl~lft~rrSii~~fiY~~FL 302 (350)
.+.+..|+..++.++++++|+=.++...++=..++
T Consensus 69 v~ft~vE~~~Gl~LilGL~TRLaa~~~~~l~~~i~ 103 (167)
T PF04173_consen 69 VVFTIVEIIFGLLLILGLFTRLAALVALGLALGIL 103 (167)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455699999999999999988887766666555
No 8
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=30.61 E-value=1.1e+03 Score=29.11 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHHhhhhcccCCCCccccc
Q 018799 45 DVVDHYKRKFYQRYIWDLFKKQDPDLVVES 74 (350)
Q Consensus 45 ~~~~~~k~k~y~~~i~~~~~~~Dp~~~~~~ 74 (350)
+.++-.|+-|-|.+. ...||-++.-|.
T Consensus 2097 qLV~vikkAY~q~~~---~~~qDd~~~dd~ 2123 (2706)
T KOG3533|consen 2097 QLVHVIKKAYEQTNS---LFRQDDKFNDDD 2123 (2706)
T ss_pred HHHHHHHHHHHhhhh---hhhccccCCcCC
Confidence 667777777777655 334455664444
No 9
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=30.40 E-value=1.8e+02 Score=28.96 Aligned_cols=80 Identities=14% Similarity=0.316 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHHHhhc-------ccccc--CcchH----HHHHHHHHHHHHHHHHHHHHhCCCCcchhHhHHHHHHHH
Q 018799 131 IQFSVNAWVFVVAMLAIF-------PLIPR--NLSNR----AYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSI 197 (350)
Q Consensus 131 ~~F~~~awvl~~a~l~i~-------P~~~~--~~s~~----~YR~allgaa~s~gi~lyq~~g~p~~~n~~~~~~~lq~l 197 (350)
--+++.+|.++|++.+.+ |+.+. .+-|+ .|++++++.++.|.+.++...|-.-. + .+.+.-
T Consensus 102 w~rfl~~WlmF~~~tafi~~ka~rkp~~g~tpRlVYkwFl~lyklSy~~g~vGyl~im~~~~g~n~~--F----~~~~~~ 175 (328)
T KOG1734|consen 102 WYRFLFCWLMFCGFTAFITLKALRKPISGDTPRLVYKWFLFLYKLSYLLGVVGYLAIMFAQFGLNFT--F----FYLKTT 175 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhceeeE--E----eecchh
Confidence 345667888887777643 55321 01122 67888899999999999888884321 1 133334
Q ss_pred hccCchHHHHHHHHHHHhc
Q 018799 198 IATKDFIYFIYCLSFVTSH 216 (350)
Q Consensus 198 l~ddn~qYLl~aLifl~s~ 216 (350)
.+|-..-.++|+|.+-...
T Consensus 176 ~md~gi~~lfyglYyGvlg 194 (328)
T KOG1734|consen 176 YMDFGISFLFYGLYYGVLG 194 (328)
T ss_pred HhhhhHHHHHHHHHHHhhh
Confidence 4466666777777665444
No 10
>PF07681 DoxX: DoxX; InterPro: IPR011637 These proteins appear to have some sequence similarity with IPR007301 from INTERPRO but their function is unknown []. They are predicted inner membrane proteins.
Probab=25.40 E-value=1.1e+02 Score=23.52 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=26.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Q 018799 263 STTLSILTSHAEIGLGFLLIISLLSWQRNIIQTF 296 (350)
Q Consensus 263 ~~~~m~lvA~~EI~l~~~LIl~lft~rrSii~~f 296 (350)
-.-...+++..|+..++.++++++++-.+++..+
T Consensus 41 ~~~~~~~~~~~E~~~gl~l~~G~~tr~aa~~~~~ 74 (85)
T PF07681_consen 41 PGLFAYLAGIAELVGGLLLLLGLFTRLAALVLAL 74 (85)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3556677888999999999999999877655543
No 11
>PHA03309 transcriptional regulator ICP4; Provisional
Probab=25.29 E-value=1e+02 Score=35.29 Aligned_cols=8 Identities=25% Similarity=0.821 Sum_probs=4.0
Q ss_pred cccccchh
Q 018799 123 SVRWDRQT 130 (350)
Q Consensus 123 ~~r~d~~t 130 (350)
+.||-+++
T Consensus 1873 pfrwaprq 1880 (2033)
T PHA03309 1873 PFRWAPRQ 1880 (2033)
T ss_pred ccccCccc
Confidence 45565543
No 12
>PF13210 DUF4018: Domain of unknown function (DUF4018)
Probab=23.72 E-value=5.9e+02 Score=23.60 Aligned_cols=83 Identities=18% Similarity=0.315 Sum_probs=60.1
Q ss_pred cHHHHHHHHH----HHHHH--HhhhhhHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhcCCCCCh-----
Q 018799 245 SILYRKYLED----ACVWV--ESNSTTLSILTSHAEIGLGFLLIISLLSWQRNIIQTFMYWQLLKLMYHAPVSAG----- 313 (350)
Q Consensus 245 ~~l~~k~~~~----~~~~V--~~n~~~~m~lvA~~EI~l~~~LIl~lft~rrSii~~fiY~~FLrlRY~sp~~S~----- 313 (350)
.|+|..++-- +.-|. ...+++.+++++..-|+++-.|++-+|-.=|=++.-++|+.-|-.-|. -+|
T Consensus 70 P~LwkLlLl~lhImitfWlTg~NrnQqllRF~SIitIG~~S~l~~~vfPyIRlifsyi~~~VALGfGY~---i~pl~saa 146 (192)
T PF13210_consen 70 PPLWKLLLLVLHIMITFWLTGANRNQQLLRFISIITIGIMSILLVPVFPYIRLIFSYIVEVVALGFGYA---INPLFSAA 146 (192)
T ss_pred CcHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh---hhHHHHhc
Confidence 3566543322 23566 344689999999999999999888888777778888899999998886 333
Q ss_pred ---hHHHHHHHHHHhhhhhh
Q 018799 314 ---YHQSVWAKIGRTVNPLV 330 (350)
Q Consensus 314 ---ytR~af~~l~~~id~li 330 (350)
=+-.+|.+.+.-.++-+
T Consensus 147 ~~kdt~d~w~nkG~l~~~~i 166 (192)
T PF13210_consen 147 ELKDTDDFWENKGHLKKPQI 166 (192)
T ss_pred CccchhHHHHhcCCCCCCcC
Confidence 35667777776666555
No 13
>smart00222 Sec7 Sec7 domain. Domain named after the S. cerevisiae SEC7 gene product, which is required for proper protein transport through the Golgi. The domain facilitates guanine nucleotide exchange on the small GTPases, ARFs (ADP ribosylation factors).
Probab=22.75 E-value=91 Score=28.40 Aligned_cols=58 Identities=10% Similarity=0.292 Sum_probs=41.0
Q ss_pred CCCccchHHHHHHHHhhccCCC---CcchHHHhhhccCCCCCCCChhHHHHHHHHHHHHHh
Q 018799 2 GEEREDSQKIKRIAAAAYDYDN---DPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYI 59 (350)
Q Consensus 2 ~~~~~~~~~~~~~a~~~yD~~~---d~~w~~Y~~n~~~pp~~~~~~~~~~~~k~k~y~~~i 59 (350)
|+.++.++++=++=.+.|||.+ |..=..+++.+.+|....--+.+++.|=++||+.+-
T Consensus 58 ~~~~~~~~~vL~~y~~~f~f~~~~i~~ALR~~l~~f~lpgE~q~Idrile~Fs~~y~~~N~ 118 (187)
T smart00222 58 GEHDEFNRLVLHAFVDLFDFSAKDLDQALREFLESFRLPGEAQKIDRLLEAFSSRYCECNP 118 (187)
T ss_pred cCCChHHHHHHHHHHHhcCcCCCcHHHHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHCC
Confidence 4445666777666778899988 667788999999997644445556666666666665
Done!