Citrus Sinensis ID: 018803

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNVY
Secondary Structure (PSIPRED)
ccccccEEEEEEEEccccEEEEEEEcHHHHHHHHHHHHHHEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEEccHHHHHHHHcccccccccccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEEccccccccEEccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEHHHHHHcHcccccEEEEEcccEEEEEEcccHHHHHEHHHHHHHcccccccccccccccccccccccccccccccccEEccccccEccccccccHccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcEEEEEcccccccccccccEEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mksiktwrllkrnsfsdgvkFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQtemeakfspfdiskgsrfssgrlkslprgivqarsdlelrplwstsssrkkfgvysnrnllaipagikqkdNVDAIVRKFLPENFTVILFHYdgdvnawrgldwsnKAIHIAAQNQTKWWfakrflhpdvvsnydYIFLwdedlgvenfdprryLEIVksegfeisqpaldpnsteiHHKFTIRARTKKFHRRVYDlrgsvkctnisegppctgfvegmapvfsRSAWYCAWHLIQNDLVhgwgmdmklgycaqgdrtknvgiidSEYVVHQGiqtlggqpptrkvicipfllcfnvy
Flexible Loop (DISEMBL)
mksiktwrllkrnsfsdgvkFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTemeakfspfdiskgsrfssgrlkslprgivqarsdlelrplwstsssrkkfgvysnrnllaipagikqkdNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGfeisqpaldpnsteihhkftirartkkfhRRVYDLrgsvkctnisegppcTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIqtlggqpptrkvICIPFLLCFNVY
Low Complexity Region (SEG)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNVY
Disordered region (IsUnstruct)
*****TWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEA***********************************PLW******KKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ*AL***STEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNV*
Disordered Region (DISOPRED)
********LLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTT***********************************IVQARSDLE********************NLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRA**KKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ*******************LLCFNVY
Disordered Region (DISEMBL)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNVY
Disordered Region (DISPRO)
**SIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYK***********************LKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNVY
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVICIPFLLCFNVY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
449488425	410	PREDICTED: uncharacterized protein LOC10	0.945	0.807	0.747	1e-149
449457799	419	PREDICTED: uncharacterized protein LOC10	0.945	0.789	0.728	1e-147
357446399	403	Lysine ketoglutarate reductase trans-spl	0.942	0.818	0.731	1e-146
357446401	355	Lysine ketoglutarate reductase trans-spl	0.942	0.929	0.731	1e-146
356555066	411	PREDICTED: uncharacterized protein LOC10	0.942	0.802	0.723	1e-143
356549391	399	PREDICTED: uncharacterized protein LOC10	0.908	0.796	0.726	1e-143
224078896	370	predicted protein [Populus trichocarpa]	0.894	0.845	0.760	1e-142
356519538	397	PREDICTED: uncharacterized protein LOC10	0.911	0.803	0.724	1e-140
297843944	436	predicted protein [Arabidopsis lyrata su	0.965	0.775	0.687	1e-137
356546282	388	PREDICTED: uncharacterized protein LOC10	0.911	0.822	0.705	1e-136

>gi|449488425|ref|XP_004158032.1| PREDICTED: uncharacterized protein LOC101230572 [Cucumis sativus]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/333 (74%), Positives = 285/333 (85%), Gaps = 2/333 (0%)

Query: 1   MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           MK +K+W +L  KRN FSD  K+G KMKQL FM ++C+VMLF++YRTT YQY QT++E  
Sbjct: 1   MKPLKSWDILLRKRNLFSDAGKYGFKMKQLPFMGVICSVMLFIIYRTTNYQYLQTKIETA 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             PFD +K     S  L  LPRGIV+ARSDLELRPLW TSSSR K   YSNRNLLAIP G
Sbjct: 61  LQPFDTAKDYPEESQNLNGLPRGIVEARSDLELRPLWGTSSSRLKGHDYSNRNLLAIPVG 120

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK+NV++IV+KF+PENFT+ILFHYDG+V+ W  LDW N AIHIA +NQTKWW+AKRFL
Sbjct: 121 IKQKENVNSIVQKFIPENFTIILFHYDGNVDGWWDLDWCNDAIHIAVRNQTKWWYAKRFL 180

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
            P VVS YDYIFLWDEDLGVE+F PRRYLEIVKSEG EISQPALDPNST+IHH+ T+RAR
Sbjct: 181 QPAVVSIYDYIFLWDEDLGVEHFSPRRYLEIVKSEGLEISQPALDPNSTDIHHRITVRAR 240

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKK HRRVYDLRG+VKC++ SE PPCTGFVEGMAPVFS+SAW+C WHLIQNDLVHGWGMD
Sbjct: 241 TKKIHRRVYDLRGNVKCSDESEEPPCTGFVEGMAPVFSKSAWHCTWHLIQNDLVHGWGMD 300

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           MKLGYCAQGDRTKNVG+IDS+Y+VH+GIQTLGG
Sbjct: 301 MKLGYCAQGDRTKNVGVIDSQYIVHKGIQTLGG 333

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457799|ref|XP_004146635.1| PREDICTED: uncharacterized protein LOC101217607 [Cucumis sativus]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/342 (72%), Positives = 285/342 (83%), Gaps = 11/342 (3%)

Query: 1   MKSIKTWRLL--KRNSFSDGV---------KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQ 49
           MK +K+W +L  KRN FSD           K+G KMKQL FM ++C+VMLF++YRTT YQ
Sbjct: 1   MKPLKSWDILLRKRNLFSDACPKHTMVVQGKYGFKMKQLPFMGVICSVMLFIIYRTTNYQ 60

Query: 50  YKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSN 109
           Y QT++E    PFD +K     S  L  LPRGIV+ARSDLELRPLW TSSSR K   YSN
Sbjct: 61  YLQTKIETALQPFDTAKDYPEESQNLNGLPRGIVEARSDLELRPLWGTSSSRLKGHDYSN 120

Query: 110 RNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQT 169
           RNLLAIP GIKQK+NV++IV+KF+PENFT+ILFHYDG+V+ W  LDW N AIHIA +NQT
Sbjct: 121 RNLLAIPVGIKQKENVNSIVQKFIPENFTIILFHYDGNVDGWWDLDWCNDAIHIAVRNQT 180

Query: 170 KWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEI 229
           KWW+AKRFL P VVS YDYIFLWDEDLGVE+F PRRYLEIVKSEG EISQPALDPNST+I
Sbjct: 181 KWWYAKRFLQPAVVSIYDYIFLWDEDLGVEHFSPRRYLEIVKSEGLEISQPALDPNSTDI 240

Query: 230 HHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQN 289
           HH+ T+RARTKK HRRVYDLRG+VKC++ SE PPCTGFVEGMAPVFS+SAW+C WHLIQN
Sbjct: 241 HHRITVRARTKKIHRRVYDLRGNVKCSDESEEPPCTGFVEGMAPVFSKSAWHCTWHLIQN 300

Query: 290 DLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           DLVHGWGMDMKLGYCAQGDRTKNVG+IDS+Y+VH+GIQTLGG
Sbjct: 301 DLVHGWGMDMKLGYCAQGDRTKNVGVIDSQYIVHKGIQTLGG 342

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446399|ref|XP_003593477.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula] gi|355482525|gb|AES63728.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/331 (73%), Positives = 282/331 (85%), Gaps = 1/331 (0%)

Query: 1   MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFS 60
           MKS++ W + K++  SDG K   +MKQL FMA++CTVMLF+VYRTT YQY Q E++ K+S
Sbjct: 4   MKSLR-WLMRKKSGLSDGGKSSFRMKQLPFMAVVCTVMLFIVYRTTKYQYHQEEIDKKWS 62

Query: 61  PFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIK 120
            +  ++    +S +LK LPRGI+Q  SDLELRPLW  S+SR K   YSNRNLLAIP GIK
Sbjct: 63  LWGKAEAYLTTSQKLKGLPRGIIQDSSDLELRPLWLRSNSRSKSRDYSNRNLLAIPVGIK 122

Query: 121 QKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHP 180
           QK NV+A+V+KFLPENFT+ILFHYDG+V+ W  LDWS+KAIHI AQNQTKWWFAKRFLHP
Sbjct: 123 QKHNVNAMVQKFLPENFTIILFHYDGNVDGWWNLDWSSKAIHIVAQNQTKWWFAKRFLHP 182

Query: 181 DVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK 240
           D+VS YDYIFLWDEDLGVE+F P RY++IVK EG EISQPALDPNSTEIHH+ T+RAR K
Sbjct: 183 DIVSIYDYIFLWDEDLGVEHFSPSRYVKIVKEEGLEISQPALDPNSTEIHHRITVRARNK 242

Query: 241 KFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMK 300
           KFHRRVY+ RGS +C++ SEGPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWGMDMK
Sbjct: 243 KFHRRVYERRGSTRCSDASEGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGMDMK 302

Query: 301 LGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           LGYCAQGDRTK VG++DS+YVVH+GIQTLGG
Sbjct: 303 LGYCAQGDRTKKVGVVDSQYVVHKGIQTLGG 333

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446401|ref|XP_003593478.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula] gi|355482526|gb|AES63729.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/331 (73%), Positives = 282/331 (85%), Gaps = 1/331 (0%)

Query: 1   MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFS 60
           MKS++ W + K++  SDG K   +MKQL FMA++CTVMLF+VYRTT YQY Q E++ K+S
Sbjct: 4   MKSLR-WLMRKKSGLSDGGKSSFRMKQLPFMAVVCTVMLFIVYRTTKYQYHQEEIDKKWS 62

Query: 61  PFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIK 120
            +  ++    +S +LK LPRGI+Q  SDLELRPLW  S+SR K   YSNRNLLAIP GIK
Sbjct: 63  LWGKAEAYLTTSQKLKGLPRGIIQDSSDLELRPLWLRSNSRSKSRDYSNRNLLAIPVGIK 122

Query: 121 QKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHP 180
           QK NV+A+V+KFLPENFT+ILFHYDG+V+ W  LDWS+KAIHI AQNQTKWWFAKRFLHP
Sbjct: 123 QKHNVNAMVQKFLPENFTIILFHYDGNVDGWWNLDWSSKAIHIVAQNQTKWWFAKRFLHP 182

Query: 181 DVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK 240
           D+VS YDYIFLWDEDLGVE+F P RY++IVK EG EISQPALDPNSTEIHH+ T+RAR K
Sbjct: 183 DIVSIYDYIFLWDEDLGVEHFSPSRYVKIVKEEGLEISQPALDPNSTEIHHRITVRARNK 242

Query: 241 KFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMK 300
           KFHRRVY+ RGS +C++ SEGPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWGMDMK
Sbjct: 243 KFHRRVYERRGSTRCSDASEGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGMDMK 302

Query: 301 LGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           LGYCAQGDRTK VG++DS+YVVH+GIQTLGG
Sbjct: 303 LGYCAQGDRTKKVGVVDSQYVVHKGIQTLGG 333

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555066|ref|XP_003545860.1| PREDICTED: uncharacterized protein LOC100778191 [Glycine max]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 241/333 (72%), Positives = 280/333 (84%), Gaps = 3/333 (0%)

Query: 1   MKSIKT--WRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           M SIK+  W + K++  SDG K   KMK L F+A++CT+MLF+VYRTT YQY Q E++ K
Sbjct: 1   MTSIKSLRWLMRKKSGLSDGGKSSFKMKHLPFLAVLCTIMLFIVYRTTKYQYHQEEIDKK 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
           +S +   K    + G+LK LPRGI+   SDLELRPLWS SSSR K  VYSN NLLA+P G
Sbjct: 61  WSFWGQPKVYPSTYGKLKGLPRGIIHDNSDLELRPLWSRSSSRSK-AVYSNSNLLAVPVG 119

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFL ENFT+ILFHYDG+V+ W  LDWS+KAIHI A+NQTKWWFAKRFL
Sbjct: 120 IKQKQNVDAMVQKFLQENFTIILFHYDGNVDGWWNLDWSSKAIHIIARNQTKWWFAKRFL 179

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPD+VS YDYIFLWDEDLGVE+F P RY+EI+K EG EISQPALDPNSTEIHH+ TIRAR
Sbjct: 180 HPDIVSIYDYIFLWDEDLGVEHFSPSRYVEIIKREGLEISQPALDPNSTEIHHRITIRAR 239

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY+ RGS +C+++SEGPPCTGFVEGMAPVFS+SAWYC WHLIQNDLVHGWG+D
Sbjct: 240 TKKFHRRVYERRGSTRCSDLSEGPPCTGFVEGMAPVFSQSAWYCTWHLIQNDLVHGWGVD 299

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           MKLGYCAQGDRTK VG++DSEYV H+GIQTLGG
Sbjct: 300 MKLGYCAQGDRTKKVGVVDSEYVFHKGIQTLGG 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549391|ref|XP_003543077.1| PREDICTED: uncharacterized protein LOC100776750 [Glycine max]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/333 (72%), Positives = 276/333 (82%), Gaps = 15/333 (4%)

Query: 1   MKSIKT--WRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           M SIK+  W + K++  SDG K   KMKQL F+A++CT+MLF+VYRTT YQY Q E+   
Sbjct: 1   MTSIKSLRWLMRKKSGLSDGGKSSFKMKQLPFLAVLCTIMLFIVYRTTKYQYHQEEVYPS 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
                       +SG+LK LPRGI+   SDLELRPLWS S+SR K  VYSN NLLA+P G
Sbjct: 61  ------------TSGKLKGLPRGIIHDNSDLELRPLWSRSNSRSK-AVYSNSNLLAVPVG 107

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFL ENFT+ILFHYDG+V+ W  LDWS+KAIHI A+NQTKWWFAKRFL
Sbjct: 108 IKQKQNVDAMVQKFLRENFTIILFHYDGNVDGWWNLDWSSKAIHIVARNQTKWWFAKRFL 167

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPD+VS YDYIFLWDEDLGVE+F P RY+EI+K EG EISQPALDPNSTEIHHK TIRAR
Sbjct: 168 HPDIVSIYDYIFLWDEDLGVEHFSPSRYVEIIKREGLEISQPALDPNSTEIHHKITIRAR 227

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY+ RGS +C+++SEGPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+D
Sbjct: 228 TKKFHRRVYERRGSTRCSDLSEGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGVD 287

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
           MKLGYCAQGDRTK VG++DSEYV HQGIQTLGG
Sbjct: 288 MKLGYCAQGDRTKKVGVVDSEYVFHQGIQTLGG 320

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078896|ref|XP_002305670.1| predicted protein [Populus trichocarpa] gi|222848634|gb|EEE86181.1| predicted protein [Populus trichocarpa]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/313 (76%), Positives = 267/313 (85%)

Query: 25  MKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQ 84
           MK L FM ++CT MLFVVYRTT YQY  TEM+ K  PF+I K S  +SG L  LP GI++
Sbjct: 1   MKLLPFMGVLCTAMLFVVYRTTIYQYHHTEMDEKLYPFEILKESALASGLLGGLPHGIIR 60

Query: 85  ARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHY 144
           A SDLEL+PLWSTSSSR K    +   LLAIP GIKQKDNVD IV+KFLPENFTVILFHY
Sbjct: 61  ASSDLELKPLWSTSSSRSKVDPSTRHYLLAIPVGIKQKDNVDHIVQKFLPENFTVILFHY 120

Query: 145 DGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPR 204
           DG+V+ W  LDWSN+AIHI A+NQTKWWFAKRFLHP VVS YDYIFLWDEDLG+E+F+P 
Sbjct: 121 DGNVDGWWDLDWSNEAIHIVAKNQTKWWFAKRFLHPAVVSAYDYIFLWDEDLGIEHFNPG 180

Query: 205 RYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPC 264
           +YL+IV+ EG EISQPALDPNST+IHH+ TIRAR KKFHRRVYD RGS KC++ISEGPPC
Sbjct: 181 KYLKIVRFEGLEISQPALDPNSTDIHHRITIRARMKKFHRRVYDSRGSTKCSDISEGPPC 240

Query: 265 TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324
           TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTK VG+IDSEY+VH+
Sbjct: 241 TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKKVGVIDSEYIVHK 300

Query: 325 GIQTLGGQPPTRK 337
           GIQTLGG+   R+
Sbjct: 301 GIQTLGGRKTPRR 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519538|ref|XP_003528429.1| PREDICTED: uncharacterized protein LOC100792028 [Glycine max]

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 231/319 (72%), Positives = 269/319 (84%)

Query: 20  KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLP 79
           K  +KMKQL FMA++C VMLFVVYRT  YQ  Q E++ +++  +  K S  +SG LK LP
Sbjct: 12  KSSLKMKQLPFMAVVCIVMLFVVYRTLKYQSYQEEIDKQWNFREDEKASSETSGNLKGLP 71

Query: 80  RGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTV 139
           RGI+QA SD ELRPLWS SS R K  VYSNRNLLA+P GIKQK NVDA+V+KFLP+NFT+
Sbjct: 72  RGIIQATSDFELRPLWSPSSLRSKVSVYSNRNLLAVPVGIKQKHNVDAMVQKFLPDNFTI 131

Query: 140 ILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVE 199
           ILFHYD +++ W  L+W++KAIHI AQNQTKWWFAKRFLHPD+VS YDYIFLWDEDLGVE
Sbjct: 132 ILFHYDANMDGWWDLNWTSKAIHITAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVE 191

Query: 200 NFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNIS 259
           +F P RY+EIVK EG EISQPALDPNSTEIHH+ T+RARTKK HRRVY+LRGS +C+  S
Sbjct: 192 HFSPSRYIEIVKEEGLEISQPALDPNSTEIHHRITVRARTKKVHRRVYELRGSTRCSEAS 251

Query: 260 EGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSE 319
           +GPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+D+K+GYCAQGDRT+NVG++DSE
Sbjct: 252 KGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGVDIKIGYCAQGDRTQNVGVVDSE 311

Query: 320 YVVHQGIQTLGGQPPTRKV 338
           YVVH+ IQTLGG     KV
Sbjct: 312 YVVHKAIQTLGGSDDPTKV 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843944|ref|XP_002889853.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335695|gb|EFH66112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/342 (68%), Positives = 274/342 (80%), Gaps = 4/342 (1%)

Query: 1   MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           MKSIK+ + L  K+ +  +  K G KMK   F+A+MCT +L   Y+TT  Q++QTE+E  
Sbjct: 8   MKSIKSLKSLVRKKTNAQEVSKSGWKMKP--FLALMCTALLIFWYKTTNIQFEQTEIEET 65

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             PFD++K S   + +LK LP GI+Q RSDLEL+PLWS SS R K    +NRNLLAIP G
Sbjct: 66  DYPFDMAKESETVNDKLKVLPHGIIQPRSDLELKPLWSRSSLRSKGVEMTNRNLLAIPVG 125

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFLP NFT++LFHYDG+++ W  LDWS+KAIHI AQNQTKWWFAKRFL
Sbjct: 126 IKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLDWSSKAIHIVAQNQTKWWFAKRFL 185

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPDVVS YDYIFLWDEDLGVENF+P RYL IVKS G EISQPALD NSTEIHHK T+R+R
Sbjct: 186 HPDVVSIYDYIFLWDEDLGVENFNPERYLRIVKSVGLEISQPALDHNSTEIHHKITLRSR 245

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY  RG  +C+N S  PPCTGFVEGMAPVFS++AW+C W+LIQNDLVHGWGMD
Sbjct: 246 TKKFHRRVYINRGHKRCSNTSADPPCTGFVEGMAPVFSKAAWFCTWNLIQNDLVHGWGMD 305

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKVIC 340
           MKLGYCAQGDRTKNVGI+DSEY+VHQGIQTLG   P +K   
Sbjct: 306 MKLGYCAQGDRTKNVGIVDSEYIVHQGIQTLGESVPEKKTTA 347

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546282|ref|XP_003541558.1| PREDICTED: uncharacterized protein LOC100807744 [Glycine max]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 225/319 (70%), Positives = 266/319 (83%)

Query: 20  KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLP 79
           K  +KM QL FMA++C VMLFVVYRT  YQ  Q +++ +++  +  K    +SG LK LP
Sbjct: 3   KSSLKMTQLPFMAVVCIVMLFVVYRTLKYQSYQEQIDKQWNIREEEKAYTETSGNLKGLP 62

Query: 80  RGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTV 139
           +GI+QA SDLELR LWS S+ R K  VYSNRNLLA+  GIKQK NVD +V+KFLP+NFT+
Sbjct: 63  QGIIQATSDLELRRLWSPSNLRSKASVYSNRNLLAVAVGIKQKHNVDVMVQKFLPDNFTI 122

Query: 140 ILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVE 199
           ILFHYD +++ W  L WS+KAIHI AQNQTKWWFAKRFLHPD+VS YDYIFLWDEDLGVE
Sbjct: 123 ILFHYDANLDGWWDLSWSSKAIHITAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVE 182

Query: 200 NFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNIS 259
           +F P RY+EIVK EG EISQPALDPNSTEIHH+ T+RARTKK HRRVY+LRG+ KC++ S
Sbjct: 183 HFSPSRYIEIVKEEGLEISQPALDPNSTEIHHRITVRARTKKVHRRVYELRGNTKCSDAS 242

Query: 260 EGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSE 319
           +GPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+DMK+GYCAQG+RT+NVG++DSE
Sbjct: 243 KGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGLDMKVGYCAQGERTQNVGVVDSE 302

Query: 320 YVVHQGIQTLGGQPPTRKV 338
           +VVH+GIQTLGG     KV
Sbjct: 303 FVVHKGIQTLGGSDDPTKV 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.957	0.788	0.679	1.5e-129
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.957	0.764	0.684	3.3e-127
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.725	0.652	0.568	6.9e-86
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.754	0.653	0.492	4.5e-66
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.74	0.679	0.481	2e-65
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.7	0.641	0.496	4.1e-65
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.877	0.775	0.416	4.1e-65
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.7	0.655	0.476	6e-64
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.717	0.630	0.454	6e-64
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.702	0.613	0.466	2.6e-63

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
 Identities = 231/340 (67%), Positives = 281/340 (82%)

Query:     1 MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
             + SIK+W+ L  +RN+  +G K   KMK +  + +MCTV+L   Y+TT  QY+QTE+E  
Sbjct:     5 LPSIKSWKSLVKRRNNAQEGGKSSWKMKPV--VVLMCTVLLIFWYKTTNIQYEQTEIEET 62

Query:    59 FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
               PF+++K S   S +LK LP GI+Q +SDLEL+PLWS+SS R K G  +NRNLLA+P G
Sbjct:    63 DYPFEMAKESEPVSEKLKGLPFGIMQPKSDLELKPLWSSSSLRSKSGELTNRNLLAMPVG 122

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             +KQKDNVDA+V+KFLP NFTVILFHYDG+++ W  L+WS+KAIHI A NQTKWWFAKRFL
Sbjct:   123 LKQKDNVDAVVKKFLPANFTVILFHYDGNMDQWWDLEWSSKAIHIVAHNQTKWWFAKRFL 182

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPD+VS YDY+FLWDEDLGVENF+P++YL IVK+ G EISQPAL PNSTE+HH+ T+R+R
Sbjct:   183 HPDIVSIYDYVFLWDEDLGVENFNPQKYLRIVKTAGLEISQPALHPNSTEVHHRITVRSR 242

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
             TK FHRRVYD RG++KC+N SEGPPCTGFVEGMAPVFSRSAW+C W+LIQNDLVHGWGMD
Sbjct:   243 TKIFHRRVYDSRGNMKCSNASEGPPCTGFVEGMAPVFSRSAWFCTWNLIQNDLVHGWGMD 302

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQP-PTRK 337
             MKLGYCAQGDR+K VGI+DSEY+ HQGIQTLGG   P +K
Sbjct:   303 MKLGYCAQGDRSKKVGIVDSEYIFHQGIQTLGGSGYPDKK 342

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
 Identities = 232/339 (68%), Positives = 277/339 (81%)

Query:     1 MKSIKTWR-LLKRNSFSDGV-KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
             MKSIK+ + L+KR + +  V K G KMK   F+A+MCT +L   Y+TT  Q++QTE+E  
Sbjct:     8 MKSIKSLKSLVKRKTNAQEVSKSGWKMKP--FLALMCTALLIFWYKTTNIQFEQTEIEET 65

Query:    59 FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
               PFD++K S   + +LK LPRGI+Q+RSDLEL+PLWS  S R K    +NRNLLAIP G
Sbjct:    66 DYPFDMAKESEAVNDKLKGLPRGIIQSRSDLELKPLWSRGSLRSKGVEMTNRNLLAIPVG 125

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             +KQK NVDA+V+KFLP NFT++LFHYDG+++ W  L+WS+K+IHI AQNQTKWWFAKRFL
Sbjct:   126 LKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFL 185

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPDVVS YDYIFLWDEDLGVENF+P RYL+IVKS G EISQPALD NSTEIHHK T+R++
Sbjct:   186 HPDVVSIYDYIFLWDEDLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSK 245

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
             TKKFHRRVY  RG  +C+N S  PPCTGFVEGMAPVFS++AW C W+LIQNDLVHGWGMD
Sbjct:   246 TKKFHRRVYINRGHKRCSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMD 305

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRK 337
             MKLGYCAQGDRTKNVGI+DSEY++HQGIQTLG   P +K
Sbjct:   306 MKLGYCAQGDRTKNVGIVDSEYILHQGIQTLGESVPEKK 344

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
 Identities = 145/255 (56%), Positives = 199/255 (78%)

Query:    76 KSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPE 135
             ++LP+GI++  S+LE + LW+   ++K+   +S  +LLA+  GIKQK+ V+ +++KF P 
Sbjct:    75 EALPQGIIEKTSNLETQHLWNYDDTKKRRPNHS-MSLLAMAVGIKQKELVNKVIQKFPPR 133

Query:   136 NFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDED 195
             +F V+LFHYDG V+ W+   W+N AIH++  NQTKWWFAKRFLHPD+V+ Y+YIFLWDED
Sbjct:   134 DFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLWDED 193

Query:   196 LGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKC 255
             LGV +F+P+RYL IVK EG EISQPALD + +E+HH  T R +  K HRR+Y  +GS +C
Sbjct:   194 LGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRC 253

Query:   256 TNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGI 315
              + S  PPC G+VE MAPVFSR+AW C+W++IQNDL+H WG+D +LGYCAQGDR KNVG+
Sbjct:   254 DDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGV 313

Query:   316 IDSEYVVHQGIQTLG 330
             +D+EY++H G+ TLG
Sbjct:   314 VDAEYIIHYGLPTLG 328

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 135/274 (49%), Positives = 173/274 (63%)

Query:    60 SPFDISKGSRFSSGR-LKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             +P D SK    S+ R  + LP G+V A SD  LR LW       K      R L     G
Sbjct:    88 TPIDKSKIWVPSNPRGAEMLPPGMVAAESDFYLRRLWGLPHEDLKS---EPRYLATFTVG 144

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             I QK N+DA V+KF  ENFT++LFHYDG V  W   +WS  AIHI+ + QTKWW+AKRFL
Sbjct:   145 INQKANIDACVKKF-SENFTIVLFHYDGRVTEWDEFEWSKTAIHISVRKQTKWWYAKRFL 203

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPD+V+ YDYIF+WDEDLGVE+F+   Y+++VK  G EISQP L+PN   +  + T R  
Sbjct:   204 HPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKKHGLEISQPGLEPNQG-LTWQMTKRRG 262

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
               + H+   +  G   C++    PPC  FVE MAPVFSR+AW C WH+IQNDLVHGWG+D
Sbjct:   263 DMEVHKITEERPGW--CSD-PHLPPCAAFVEIMAPVFSRNAWRCVWHVIQNDLVHGWGLD 319

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQ 332
               L  C +    K +G++DS++VVHQ   +LG Q
Sbjct:   320 FALRRCVEPAHEK-IGVVDSQWVVHQSFPSLGNQ 352

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 129/268 (48%), Positives = 164/268 (61%)

Query:    66 KGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNV 125
             K    S    + LP GI+ + SDL LR LW          V   R L     G  Q+ N+
Sbjct:    71 KAIDISKACAERLPSGIIASESDLYLRRLWGNPDEDL---VKQPRYLATFTVGYNQRHNI 127

Query:   126 DAIVRKFLPENFTVILFHYDGDVNAWRG-LDWSNKAIHIAAQNQTKWWFAKRFLHPDVVS 184
             DA V KF  ENFT++LFHYDG  +AW    +WS  AIHI+ + QTKWW+AKRFLHPD+V+
Sbjct:   128 DACVSKF-SENFTIVLFHYDGVTSAWNDEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVA 186

Query:   185 NYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHR 244
              YDYIF+WDEDLGV++F+   Y+ IVK    EISQP LDP  T  + + T R    + H+
Sbjct:   187 RYDYIFIWDEDLGVDHFNAEEYIHIVKKHDLEISQPGLDPE-TGFNWQITKRREHSEVHK 245

Query:   245 RVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYC 304
                +      C+N    PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C
Sbjct:   246 ETDEKLDW--CSNPPR-PPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRC 302

Query:   305 AQGDRTKNVGIIDSEYVVHQGIQTLGGQ 332
              +    + +GI+DS+++VHQ I +LG Q
Sbjct:   303 VEEPAFEKIGIVDSQWIVHQFIPSLGNQ 330

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 127/256 (49%), Positives = 169/256 (66%)

Query:    78 LPRGIVQARSDLELRPLWST-SSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPEN 136
             LP GI+ A +D  LR LW   S   KK   Y    L+    G +Q++N++A V+KF  E+
Sbjct:    94 LPPGIIVAETDFYLRRLWGEPSEDLKKKPKY----LVTFTVGFEQRNNINAAVKKF-SED 148

Query:   137 FTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDL 196
             F ++LFHYDG    W   +WS  AIHI+A+ QTKWW+AKRFLHPDVVS Y+YIF+WDEDL
Sbjct:   149 FQILLFHYDGRTTEWDQFEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDEDL 208

Query:   197 GVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCT 256
             GVE+F+  RY+E+VK  G EISQP L+PN+  +  + T R   +  H+   +  G   C+
Sbjct:   209 GVEHFNADRYVELVKKHGLEISQPGLEPNNG-LTWEMTKRRGDRDVHKETKEKPGW--CS 265

Query:   257 NISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGII 316
             +    PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++
Sbjct:   266 D-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVV 323

Query:   317 DSEYVVHQGIQTLGGQ 332
             DS++++HQ I +LG Q
Sbjct:   324 DSQWIIHQVIPSLGSQ 339

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 134/322 (41%), Positives = 186/322 (57%)

Query:    18 GVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKS 77
             G   G+    L    +     +     T Y + ++ E  +K S  + S  S      + S
Sbjct:    34 GFLLGISFPTLSLTKMNFPSSILPSVATVYIENEKPEKSSKTSSQNESDASHHHKIWVPS 93

Query:    78 LPRG-------IVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVR 130
              PRG        V A SD  LR LW     +    V   + L+A     +Q+ N+DA V+
Sbjct:    94 NPRGAEMLPPSFVAAESDFYLRRLWGLP--KDDLPVVKPKYLVAFTVSYEQRKNIDACVK 151

Query:   131 KFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIF 190
             KF  +NFT++LFHYDG  + +   +WS +AIH++   QTKWW+AKRFLHPD+++ Y+YIF
Sbjct:   152 KF-SDNFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIF 210

Query:   191 LWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLR 250
             +WDEDLGVENFD   Y++IV   G EISQPA++   + I  K T R    + H+ V +  
Sbjct:   211 IWDEDLGVENFDAEEYIKIVNKHGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKP 269

Query:   251 GSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRT 310
             G  +C N    PPC GF+E MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    
Sbjct:   270 G--RC-NDPHLPPCAGFIEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHE 326

Query:   311 KNVGIIDSEYVVHQGIQTLGGQ 332
             K +G++DS++++HQ I +LG Q
Sbjct:   327 K-IGVVDSQWIIHQKIPSLGSQ 347

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 122/256 (47%), Positives = 170/256 (66%)

Query:    78 LPRGIVQARSDLELRPLWST-SSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPEN 136
             LP GIV A++D  LR LW   +   KK   Y    L+    G +Q+++++ +V+KF  E+
Sbjct:    87 LPPGIVVAKTDFYLRRLWGEPNEDLKKKPKY----LVTFTVGFEQRNHINGVVKKF-SED 141

Query:   137 FTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDL 196
             F ++LFHYDG    W   +WS  AIHI+ + QTKWW+AKRFLHPDVVS Y+YIF+WDEDL
Sbjct:   142 FQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDEDL 201

Query:   197 GVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCT 256
             GVE+F+  +Y+E+VK  G EISQP L+PN+  +  + T R   ++ H+   +  G  K  
Sbjct:   202 GVEHFNADKYIELVKKHGLEISQPGLEPNNG-LTWEMTKRRGDREVHKDTKEKPGWCKDP 260

Query:   257 NISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGII 316
             ++   PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++
Sbjct:   261 HL---PPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVV 316

Query:   317 DSEYVVHQGIQTLGGQ 332
             DS++++H+ I +LG Q
Sbjct:   317 DSQWIIHKVIPSLGSQ 332

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 119/262 (45%), Positives = 167/262 (63%)

Query:    78 LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
             LP  IV   SD  LR LW   +          R L+    G  Q+ N+D +++KF  +NF
Sbjct:   103 LPPDIVTPESDFYLRRLWGDPNEDL---TVKQRYLVTFTVGYDQRKNIDTVLKKF-SDNF 158

Query:   138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
             +++LFHYDG  + W   +WS +AIH++ + QTKWW+AKRFLHPD+V+ Y+YIF+WDEDLG
Sbjct:   159 SIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLG 218

Query:   198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
             VE+FD  +YL +VK  G EISQP L+P    +  + T +    + H+   +  G   CT+
Sbjct:   219 VEHFDSEKYLAVVKKHGLEISQPGLEPYEG-LTWEMTKKRDDTEVHKHAEERNGW--CTD 275

Query:   258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
              +  PPC  FVE MAPVFSR AW C WH+IQNDL+HGWG+D  +  C Q    K +G++D
Sbjct:   276 PNL-PPCAAFVEIMAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEK-IGVVD 333

Query:   318 SEYVVHQGIQTLG--GQPPTRK 337
             +++++HQG+ +LG  GQP   K
Sbjct:   334 AQWIIHQGVPSLGNQGQPEQGK 355

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 119/255 (46%), Positives = 162/255 (63%)

Query:    78 LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
             L  GI+   SD  LR LW              + L+A   G  QK NVDA V+KF  ++F
Sbjct:   111 LTPGIIAPESDYYLRRLWGLPEEDVPV---KPKYLIAFTVGFGQKVNVDACVKKF-SKDF 166

Query:   138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
             T++LFHYDG    W  L+WS +AIH++   QTKWW+AKRFLHPD+V+ YDY+F+WDEDLG
Sbjct:   167 TIVLFHYDGRTTEWEELEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDEDLG 226

Query:   198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
             +ENFD   Y+ ++K  G EISQPA++ +  +I  + T R    + H+   +  G  +C N
Sbjct:   227 LENFDVEEYIRLIKKHGLEISQPAVE-SKKKITWEITKRKTKGEVHKDAKEKPG--RC-N 282

Query:   258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
                 PPC  F+E MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++D
Sbjct:   283 DPHLPPCAAFIEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVD 341

Query:   318 SEYVVHQGIQTLGGQ 332
             S++++HQ + +LG Q
Sbjct:   342 SQWIIHQSLPSLGSQ 356


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      350       350    0.0010  116 3  11 22  0.48    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  268 KB (2141 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.52u 0.15s 28.67t   Elapsed:  00:00:02
  Total cpu time:  28.53u 0.15s 28.68t   Elapsed:  00:00:02
  Start:  Fri May 10 05:16:52 2013   End:  Fri May 10 05:16:54 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-135

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  387 bits (995), Expect = e-135
 Identities = 136/255 (53%), Positives = 169/255 (66%), Gaps = 8/255 (3%)

Query: 78  LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
           LP GIV + SD  LR LW +            + LLA   G  QK NVDA V+KF  +NF
Sbjct: 13  LPPGIVVSESDFYLRRLWGSPEEDVASK---PKYLLAFTVGYSQKANVDACVKKF-SDNF 68

Query: 138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
           T++LFHYDG    W  L+WS KAIH++A+ QTKWWFAKRFLHPD+V+ Y+YIFLWDEDLG
Sbjct: 69  TIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIFLWDEDLG 128

Query: 198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
           V+NFD   Y++IVK  G EISQP LDP+  +I  + T R    + H+   +        +
Sbjct: 129 VDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKGRCC---D 185

Query: 258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
            S GPPCTGFVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C      + +G++D
Sbjct: 186 NSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAHEKIGVVD 244

Query: 318 SEYVVHQGIQTLGGQ 332
           S++VVHQGI +LG Q
Sbjct: 245 SQWVVHQGIPSLGSQ 259

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	94.33
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	93.36
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	92.45
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	89.2
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	88.89
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	86.41
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	84.79
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	83.13
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	80.39

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=3.6e-116  Score=836.57  Aligned_cols=261  Identities=62%  Similarity=1.162  Sum_probs=251.4

Q ss_pred             cccCCCCCCCCCCCccccCCCcceecCCCCCCCCccCCCCCCccEEEEeccCcccccHHHHHhhcCCCCcEEEEEEeCCC
Q 018803           68 SRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGD  147 (350)
Q Consensus        68 ~~~~~~~~~~LP~giv~~~sd~~~r~lwg~p~~~~~~~~~~~k~Lv~~~VG~kqk~~Vd~~v~kf~~~nFdv~LfhYDg~  147 (350)
                      .+++|+|+|+||+|||+++|||+||||||.|+++.   +.++|||||||||+|||++||++|+|| ++|||||||||||+
T Consensus         3 ~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~---~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~   78 (294)
T PF05212_consen    3 VPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL---PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGR   78 (294)
T ss_pred             cCCCCCccccCCCCccccCCCceeeecCCCccccc---cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCC
Confidence            46899999999999999999999999999999887   457899999999999999999999999 89999999999999


Q ss_pred             CCccCCCCCCCceEEEEEeccchhhhhccccCccccCCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCC
Q 018803          148 VNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST  227 (350)
Q Consensus       148 vd~W~d~~ws~~aiHv~a~kqtKww~akRfLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~  227 (350)
                      +|+|++||||++||||+++|||||||||||||||+|++|||||||||||+||+|+|+|||+||++||||||||||+++++
T Consensus        79 vd~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~  158 (294)
T PF05212_consen   79 VDEWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSS  158 (294)
T ss_pred             cCchhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ceeeeeeeeecCcccceeeecccCCccCCCCCCCCCccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcC
Q 018803          228 EIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQG  307 (350)
Q Consensus       228 ~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g  307 (350)
                      ++||+||+|++.+++||   +.++.+.|.+++++||||||||||||||||+|||||||||||||+|||||||+|++|+ +
T Consensus       159 ~~~~~iT~R~~~~~vhr---~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~  234 (294)
T PF05212_consen  159 EIHHPITKRRPDSEVHR---KTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-G  234 (294)
T ss_pred             eeeeeEEeecCCceeEe---ccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-c
Confidence            89999999999999998   4577888999999999999999999999999999999999999999999999999999 5


Q ss_pred             CCCCcEEEEeeeeEEeeccCCCCCCCCCc
Q 018803          308 DRTKNVGIIDSEYVVHQGIQTLGGQPPTR  336 (350)
Q Consensus       308 ~~~~kiGVVDa~~V~H~~~ptlG~~~~~~  336 (350)
                      ++++||||||||||+|+|+|||||++...
T Consensus       235 ~~~~kiGVVDs~~VvH~gvptLG~~~~~~  263 (294)
T PF05212_consen  235 DRHKKIGVVDSQYVVHTGVPTLGGQGNSE  263 (294)
T ss_pred             cccccEEEEeeEEEEEcCCCcCCCccccc
Confidence            79999999999999999999999985544

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=94.33  E-value=0.18  Score=46.62  Aligned_cols=127  Identities=14%  Similarity=0.067  Sum_probs=73.1

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHh--CCccccCCc-CCCCCceeeeeeeeecCcccceeeecccCCccCCCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE--GFEISQPAL-DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE  260 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~--gLeISQPAL-d~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~  260 (350)
                      +.+|||++.|+|..++.-.++++++.+++.  +.-+..|.. +.+.. ...+...... . .-+...       .. ..+
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~-------~~-~~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLDG-L-LLRQIS-------LD-GLT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeecc-c-ceeeec-------cc-ccC
Confidence            479999999999999998999999988876  577777764 33221 1222221111 1 000000       00 000


Q ss_pred             CCCccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEee
Q 018803          261 GPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (350)
Q Consensus       261 ~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~  324 (350)
                      .+.-+.++=.-+.+++|++++.+= .+..++ -.++.|.-|..-+. ..+.++.++....+.|.
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~iG-~fde~~-fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~  201 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRLG-MMDEEL-FIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHR  201 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHhC-CccHhh-cccchHHHHHHHHH-HCCCEEEEeCCEEEEEe
Confidence            111111111112368999999773 444433 34567766653333 23578999999999997

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.36  E-value=0.28  Score=42.35  Aligned_cols=103  Identities=19%  Similarity=0.245  Sum_probs=67.1

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeecccCCccCCCCCCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP  263 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~~pp  263 (350)
                      +.+||+++.|+|..++...++++.+.++..+..+..|......+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            68999999999999998888888887764455444443221110                                   1


Q ss_pred             ccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEeeccCCCCC
Q 018803          264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG  331 (350)
Q Consensus       264 cT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~~~ptlG~  331 (350)
                      +.+      -+++|++|+.+ ..+ .+.-..||=|.-+.+-+. ..+.++ .+.+..+.|....+.+.
T Consensus       123 ~~~------~~~~~~~~~~~-g~~-~~~~~~~~eD~~~~~r~~-~~G~~i-~~~~~~~~h~~~~~~~~  180 (202)
T cd04185         123 FVG------VLISRRVVEKI-GLP-DKEFFIWGDDTEYTLRAS-KAGPGI-YVPDAVVVHKTAINKGS  180 (202)
T ss_pred             eEE------EEEeHHHHHHh-CCC-ChhhhccchHHHHHHHHH-HcCCcE-EecceEEEEcccccccc
Confidence            111      24888888866 233 233457887766554333 135688 99999999997665544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.45  E-value=0.31  Score=39.59  Aligned_cols=92  Identities=18%  Similarity=0.152  Sum_probs=60.6

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHh-CCccccCCcCCCCCceeeeeeeeecCcccceeeecccCCccCCCCCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGP  262 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~~p  262 (350)
                      +.+|||++.|+|...+...+.++.+.+.+. +..+..+.                                         
T Consensus        73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------------------------  111 (166)
T cd04186          73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-----------------------------------------  111 (166)
T ss_pred             CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------------------
Confidence            379999999999999888888888754443 22222222                                         


Q ss_pred             CccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEee
Q 018803          263 PCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (350)
Q Consensus       263 pcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~  324 (350)
                           +=.-+.+|++++++.+- .+.. ....+|-|..+...+. ..+.++..+....+.|.
T Consensus       112 -----~~~~~~~~~~~~~~~~~-~~~~-~~~~~~eD~~~~~~~~-~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         112 -----VSGAFLLVRREVFEEVG-GFDE-DFFLYYEDVDLCLRAR-LAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             -----CceeeEeeeHHHHHHcC-CCCh-hhhccccHHHHHHHHH-HcCCeEEEccceEEEec
Confidence                 00124578999998653 2322 2233777777665443 24679999999999996

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=89.20  E-value=3.9  Score=38.33  Aligned_cols=138  Identities=14%  Similarity=0.063  Sum_probs=75.6

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCC-ceeeeeeee-ec---CcccceeeecccCCccCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST-EIHHKFTIR-AR---TKKFHRRVYDLRGSVKCTNI  258 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~-~i~h~iT~r-~~---~~~vHr~~~~~~g~~~C~~~  258 (350)
                      +..|||.+.|+|..++..-++++++.+.+..-.+.-|.+..-.+ ...++-... ..   ...++...........+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            68999999999999999999999999998887788787653221 112221110 00   00011000000000000111


Q ss_pred             CCCCCccceEEEeccccChhHHHHhhhhhccCCcceeh-hh--hhhhhhhcCCCCCcEEEEeeeeEEeecc
Q 018803          259 SEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWG-MD--MKLGYCAQGDRTKNVGIIDSEYVVHQGI  326 (350)
Q Consensus       259 ~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWG-LD--f~w~~ca~g~~~~kiGVVDa~~V~H~~~  326 (350)
                      ...+..+..+-..+=+++|++|+.+= .+.. ....|| =|  +.+. +.+  .+.+|-++-...|.|...
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vG-gfDe-~~~~~~~ED~Dl~~R-~~~--~G~~i~~~p~a~v~H~~~  227 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELG-GYDE-GMDIWGGENLELSFK-VWQ--CGGSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhC-CCCC-cccccCchhHHHHHH-HHH--cCCeEEEeeccEEEEecc
Confidence            11222233333333358999998773 3433 345565 34  4443 222  246899999889999865

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=88.89  E-value=1  Score=39.68  Aligned_cols=126  Identities=17%  Similarity=0.124  Sum_probs=62.1

Q ss_pred             CccEEEEecCcccCCCCCHHHHH---HHHH-HhCCccccCCcCCCCCceeeeeeeeecCcccceeeecccCCccCCCCCC
Q 018803          185 NYDYIFLWDEDLGVENFDPRRYL---EIVK-SEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE  260 (350)
Q Consensus       185 ~YDYIflwDDDL~vd~f~i~ryf---~Ivr-~~gLeISQPALd~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~  260 (350)
                      .||||++.|+|..++...+.+++   +..+ ...+.+.+|...........+.. +.....+.  ..      .+..  .
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~------~~~~--~  143 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKLR--IQ------KEGE--E  143 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccce--ec------cccc--C
Confidence            68999999999999988888885   2222 22445555554322211111111 10110000  00      0000  0


Q ss_pred             CCCccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEee
Q 018803          261 GPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (350)
Q Consensus       261 ~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~  324 (350)
                      ..+-..++=.-+-+|+|++++.+= .+..+. ...|-|..+...+. ..+.++..+....+.|.
T Consensus       144 ~~~~~~~~~~~~~~~rr~~~~~~g-gfd~~~-~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         144 GLKEVDFLITSGSLISLEALEKVG-GFDEDL-FIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             CceEeeeeeccceEEcHHHHHHhC-CCCHHH-cCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence            000001111111258999999874 233222 23345655554333 24568998888888887

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=86.41  E-value=1  Score=39.47  Aligned_cols=196  Identities=16%  Similarity=0.134  Sum_probs=90.5

Q ss_pred             cEEEEeccCcccccHHHHHhhcCC---CCcEEEEEEeCCCCCccCC-C-----CCCCceEEEEEe---cc--chhhhhcc
Q 018803          111 NLLAIPAGIKQKDNVDAIVRKFLP---ENFTVILFHYDGDVNAWRG-L-----DWSNKAIHIAAQ---NQ--TKWWFAKR  176 (350)
Q Consensus       111 ~Lv~~~VG~kqk~~Vd~~v~kf~~---~nFdv~LfhYDg~vd~W~d-~-----~ws~~aiHv~a~---kq--tKww~akR  176 (350)
                      -.|++++=.. ...+...|+....   .++.|++..- +..++=.+ +     ++.+..+++...   .+  +|-..+..
T Consensus         3 v~Vvip~~~~-~~~l~~~l~sl~~~~~~~~~v~vvd~-~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~   80 (228)
T PF13641_consen    3 VSVVIPAYNE-DDVLRRCLESLLAQDYPRLEVVVVDD-GSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNE   80 (228)
T ss_dssp             EEEE--BSS--HHHHHHHHHHHTTSHHHTEEEEEEEE--SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHH
T ss_pred             EEEEEEecCC-HHHHHHHHHHHHcCCCCCeEEEEEEC-CCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHH
Confidence            4455565433 2345555554432   5688888773 33222111 1     233223444322   22  34444444


Q ss_pred             ccCccccCCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCc--ccceeeecccCCcc
Q 018803          177 FLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK--KFHRRVYDLRGSVK  254 (350)
Q Consensus       177 fLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~r~~~~--~vHr~~~~~~g~~~  254 (350)
                      .+.   ...+|||++.|+|..++...+.++++.+...+..+.|+........  ..++.-....  .-|...+.      
T Consensus        81 ~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------  149 (228)
T PF13641_consen   81 ALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHLRFRS------  149 (228)
T ss_dssp             HHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETTTS-T------
T ss_pred             HHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhhhhhh------
Confidence            442   2459999999999999999999999999778888888766433211  1122111100  00000000      


Q ss_pred             CCCCCCCCCccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEeeccCC
Q 018803          255 CTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQT  328 (350)
Q Consensus       255 C~~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~~~pt  328 (350)
                      .......+.++|    -+=+|+|++++.+- .+..   ..-|=|+.+...+.. .+.++.......+.|...++
T Consensus       150 ~~~~~~~~~~~G----~~~~~rr~~~~~~g-~fd~---~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~~~~~  214 (228)
T PF13641_consen  150 GRRALGVAFLSG----SGMLFRRSALEEVG-GFDP---FILGEDFDLCLRLRA-AGWRIVYAPDALVYHEEPSS  214 (228)
T ss_dssp             T-B----S-B------TEEEEEHHHHHHH--S--S---SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE--SSS
T ss_pred             hhcccceeeccC----cEEEEEHHHHHHhC-CCCC---CCcccHHHHHHHHHH-CCCcEEEECCcEEEEeCCCC
Confidence            000000111111    12358999999885 2322   444577777644332 46799999988888885444

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=84.79  E-value=1  Score=39.27  Aligned_cols=93  Identities=16%  Similarity=0.130  Sum_probs=54.4

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeecccCCccCCCCCCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP  263 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~~~~~pp  263 (350)
                      +.+|||++.|.|..++...+.++++.....+..+.++.                                 |        
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------------------------~--------  123 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------------------------C--------  123 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee---------------------------------c--------
Confidence            67999999999998877777777665422222221111                                 0        


Q ss_pred             ccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEee
Q 018803          264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (350)
Q Consensus       264 cT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~  324 (350)
                      ++    ..+=+|+|++++.+=.+ . ....-.+=|+.+..-+.. .+.++..++...+.|.
T Consensus       124 ~~----g~~~~~r~~~~~~~ggf-~-~~~~~~~eD~~l~~rl~~-~G~~i~~~~~~~~~~~  177 (196)
T cd02520         124 AF----GKSMALRREVLDAIGGF-E-AFADYLAEDYFLGKLIWR-LGYRVVLSPYVVMQPL  177 (196)
T ss_pred             cc----CceeeeEHHHHHhccCh-H-HHhHHHHHHHHHHHHHHH-cCCeEEEcchheeccC
Confidence            00    12347889998866322 1 111224568777755542 4678988888544443

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=83.13  E-value=2.5  Score=36.98  Aligned_cols=129  Identities=13%  Similarity=0.017  Sum_probs=68.9

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeee-cCcccceeeecccCCccCC-CCCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRA-RTKKFHRRVYDLRGSVKCT-NISEG  261 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~r~-~~~~vHr~~~~~~g~~~C~-~~~~~  261 (350)
                      +.+|||.+.|+|..++...++++++..++.+..+.+............. .... ....+     .......+. .....
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~  153 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQK-AIAVAQSSPL-----GSGGSAYRGGAVKIG  153 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHH-HHHHHhhchh-----ccCCccccccccccc
Confidence            4799999999999999888999998888878777665433211000000 0000 00000     000000000 00000


Q ss_pred             -CCccceEEEeccccChhHHHHhhhhhccCCcceehhhhhhh-hhhcCCCCCcEEEEeeeeEEeeccCC
Q 018803          262 -PPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLG-YCAQGDRTKNVGIIDSEYVVHQGIQT  328 (350)
Q Consensus       262 -ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWGLDf~w~-~ca~g~~~~kiGVVDa~~V~H~~~pt  328 (350)
                       ....++   |  +|+|++|+.+= .+...  ...|-|+.+. ++.+  .+.++..+....+.|....+
T Consensus       154 ~~~~~~~---~--~~~~~~~~~~g-~~~~~--~~~~eD~~l~~r~~~--~G~~~~~~~~~~~~~~~~~s  212 (249)
T cd02525         154 YVDTVHH---G--AYRREVFEKVG-GFDES--LVRNEDAELNYRLRK--AGYKIWLSPDIRVYYYPRST  212 (249)
T ss_pred             ccccccc---c--eEEHHHHHHhC-CCCcc--cCccchhHHHHHHHH--cCcEEEEcCCeEEEEcCCCC
Confidence             001111   1  47899998763 23222  2346776665 3444  35689999999998885443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=80.39  E-value=1  Score=38.52  Aligned_cols=40  Identities=15%  Similarity=0.171  Sum_probs=31.9

Q ss_pred             cCCccEEEEecCcccCCCCCHHHHHHHHHHh-CCccccCCc
Q 018803          183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL  222 (350)
Q Consensus       183 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL  222 (350)
                      .+.+|||++.|+|..++.-.++++++.++++ +..+..+..
T Consensus        78 ~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~  118 (201)
T cd04195          78 HCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGV  118 (201)
T ss_pred             hcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccE
Confidence            3689999999999999988899999887654 566666543

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	90.85
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	83.07

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=90.85  E-value=0.51  Score=40.48  Aligned_cols=119  Identities=8%  Similarity=-0.052  Sum_probs=67.7

Q ss_pred             CCccEEEEecCcccCCCCCHHHHHHHHHHh-CCccccCCc-----CCCCCceeeeeeeeecCcccceeeecccCCccCCC
Q 018803          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL-----DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN  257 (350)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~r~~~~~vHr~~~~~~g~~~C~~  257 (350)
                      +..|||++.|+|..++...++++++.++++ +..+..+..     +.+ +...+.. . .+...+..             
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~-------------  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVTW-------------  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCBS-------------
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHHH-------------
Confidence            688999999999999998899999999876 666666543     221 1111110 0 01100100             


Q ss_pred             CCCCCCccceEEEeccccChhHHHHhhhhh----ccCCcceehhhhhhhhhhcCCCCCcEEEEeeeeEEeec
Q 018803          258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLI----QNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG  325 (350)
Q Consensus       258 ~~~~ppcT~FVEiMAPVFSR~Awrcvw~mi----qNdlvhGWGLDf~w~~ca~g~~~~kiGVVDa~~V~H~~  325 (350)
                           ....++-..+=+|+|++++.+-..+    ..+.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus       151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI  215 (255)
T ss_dssp             -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred             -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence                 0111222234578999999874222    11222334567665544432 23 68899988887773

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=83.07  E-value=3  Score=41.35  Aligned_cols=108  Identities=15%  Similarity=0.233  Sum_probs=59.9

Q ss_pred             CCccEEEEeccCcccccHHHHHhhcC----CCCcEEEEEEeCCCCCccCC-C-CCCC-ceEEEEEeccc---hhhhhccc
Q 018803          108 SNRNLLAIPAGIKQKDNVDAIVRKFL----PENFTVILFHYDGDVNAWRG-L-DWSN-KAIHIAAQNQT---KWWFAKRF  177 (350)
Q Consensus       108 ~~k~Lv~~~VG~kqk~~Vd~~v~kf~----~~nFdv~LfhYDg~vd~W~d-~-~ws~-~aiHv~a~kqt---Kww~akRf  177 (350)
                      .++.-|++++=.. ...+...++...    ..++.|++.. ||..|+=.+ + ++.+ ..+++....+.   +=.....-
T Consensus        92 ~p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g  169 (625)
T 2z86_A           92 IDGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG  169 (625)
T ss_dssp             CCCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred             CCcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence            4566677777443 344444444332    2378888776 666554221 1 0111 12333333221   21111111


Q ss_pred             cCccccCCccEEEEecCcccCCCCCHHHHHHHHHHhC-CccccC
Q 018803          178 LHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEG-FEISQP  220 (350)
Q Consensus       178 LHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g-LeISQP  220 (350)
                      +   -.+.+|||++.|+|..++.-.+.++++.+++.. ..+.+|
T Consensus       170 ~---~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~  210 (625)
T 2z86_A          170 L---RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGP  210 (625)
T ss_dssp             H---HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECC
T ss_pred             H---HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEe
Confidence            1   135899999999999999999999999998743 344444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	350
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	82.83

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.83  E-value=0.66  Score=39.73  Aligned_cols=145  Identities=16%  Similarity=0.077  Sum_probs=74.3

Q ss_pred             cCCccEEEEecCcccCCCCCHHHHHHHHHHhCCccccCCcCCCCCc-ee----eeeeeeecCcccceeeecc--cCCccC
Q 018803          183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTE-IH----HKFTIRARTKKFHRRVYDL--RGSVKC  255 (350)
Q Consensus       183 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~-i~----h~iT~r~~~~~vHr~~~~~--~g~~~C  255 (350)
                      .+.-|||++.|+|..++.-.++++++.+++..-.+..|.++.-... ..    ...+...-...++.+....  ......
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            4788999999999999999999999999998888777765321100 00    0000000000011000000  000000


Q ss_pred             CCCCCCCCccceEEEeccccChhHHHHhhhhhccCCcceeh---hhhhhhhhhcCCCCCcEEEEeeeeEEeeccCCCCCC
Q 018803          256 TNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWG---MDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQ  332 (350)
Q Consensus       256 ~~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNdlvhGWG---LDf~w~~ca~g~~~~kiGVVDa~~V~H~~~ptlG~~  332 (350)
                      ....+.+..+.++..-+=.++|++|..+= .+. +....||   +|+.+.....   +.+|..+-...|.|....+.+..
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vG-gfD-e~~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~~~~~~~~  259 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIG-TYD-AGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKATPYT  259 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTT-SCC-TTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC-------
T ss_pred             ccccccccccceecceeeeeeHHHHHHhC-CCC-CCCcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeCCCCCCCC
Confidence            11111222223333222247899999763 343 3344554   4455543333   46899999999999765555544