Query 018804
Match_columns 350
No_of_seqs 182 out of 1188
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018804.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018804hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.5E-38 3.3E-43 289.5 32.4 322 4-333 3-337 (358)
2 PRK11272 putative DMT superfam 100.0 6.1E-33 1.3E-37 248.9 29.2 280 14-327 8-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 1.7E-32 3.7E-37 246.8 29.0 279 16-327 6-290 (299)
4 PRK10532 threonine and homoser 100.0 2.5E-32 5.4E-37 244.9 29.2 284 3-328 2-285 (293)
5 PRK11689 aromatic amino acid e 100.0 6E-32 1.3E-36 242.7 26.0 285 12-327 2-290 (295)
6 PRK15430 putative chlorampheni 100.0 1.9E-31 4.2E-36 239.5 27.2 279 10-325 4-286 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 3.1E-31 6.6E-36 234.5 28.1 258 26-319 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-30 2.8E-35 235.2 26.5 284 17-329 5-298 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.3E-28 2.7E-33 219.8 24.9 275 16-321 3-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 6.5E-28 1.4E-32 215.2 29.0 301 12-333 11-314 (334)
11 PTZ00343 triose or hexose phos 100.0 1.7E-27 3.8E-32 217.9 28.3 284 12-325 47-349 (350)
12 TIGR00688 rarD rarD protein. T 100.0 5.7E-26 1.2E-30 200.2 27.3 248 14-299 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 5.7E-24 1.2E-28 190.9 30.1 283 11-325 4-288 (292)
14 COG2962 RarD Predicted permeas 99.9 8.4E-24 1.8E-28 179.7 24.3 280 11-327 4-286 (293)
15 COG5006 rhtA Threonine/homoser 99.9 2.6E-23 5.7E-28 171.9 25.6 275 15-329 13-287 (292)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 4.8E-22 1E-26 177.5 24.7 274 15-324 2-288 (290)
17 KOG4510 Permease of the drug/m 99.9 1.1E-24 2.5E-29 181.1 1.4 291 11-326 35-327 (346)
18 PF08449 UAA: UAA transporter 99.9 4.3E-20 9.4E-25 166.4 26.8 267 42-329 31-302 (303)
19 KOG2765 Predicted membrane pro 99.9 4.5E-20 9.8E-25 161.1 18.0 301 9-328 9-394 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 4.1E-20 8.8E-25 163.1 9.0 288 16-331 19-314 (316)
21 KOG2234 Predicted UDP-galactos 99.8 1.8E-15 4E-20 132.7 28.7 299 14-329 15-327 (345)
22 KOG1580 UDP-galactose transpor 99.7 1.3E-16 2.8E-21 130.9 14.6 262 43-328 53-317 (337)
23 PF04142 Nuc_sug_transp: Nucle 99.7 5.1E-15 1.1E-19 128.1 21.6 231 73-315 12-244 (244)
24 KOG1581 UDP-galactose transpor 99.7 1.1E-15 2.4E-20 130.5 16.3 265 42-328 50-317 (327)
25 COG2510 Predicted membrane pro 99.7 4.5E-16 9.7E-21 115.7 11.1 135 14-156 3-138 (140)
26 KOG2766 Predicted membrane pro 99.7 3.6E-17 7.7E-22 135.8 4.1 287 13-330 17-305 (336)
27 KOG1444 Nucleotide-sugar trans 99.6 1E-13 2.2E-18 120.1 23.0 289 12-330 10-306 (314)
28 KOG1443 Predicted integral mem 99.6 6.4E-14 1.4E-18 119.7 20.8 254 43-323 45-314 (349)
29 COG2510 Predicted membrane pro 99.6 8.7E-15 1.9E-19 108.9 12.8 136 186-324 4-139 (140)
30 PF00892 EamA: EamA-like trans 99.6 8.2E-15 1.8E-19 114.4 9.8 125 24-156 1-125 (126)
31 KOG1442 GDP-fucose transporter 99.6 4.1E-15 8.8E-20 124.9 6.7 266 42-332 60-335 (347)
32 PF00892 EamA: EamA-like trans 99.5 1.4E-13 3.1E-18 107.3 8.3 125 195-323 1-125 (126)
33 PF06800 Sugar_transport: Suga 99.4 1.5E-10 3.3E-15 100.0 23.9 253 40-321 9-268 (269)
34 KOG1583 UDP-N-acetylglucosamin 99.4 2.1E-12 4.6E-17 108.8 10.6 266 44-326 34-316 (330)
35 TIGR00950 2A78 Carboxylate/Ami 99.4 1.9E-11 4.2E-16 107.9 15.8 133 11-152 125-259 (260)
36 COG5070 VRG4 Nucleotide-sugar 99.3 1.4E-11 3E-16 100.8 11.9 275 28-327 20-299 (309)
37 KOG3912 Predicted integral mem 99.3 2.4E-11 5.1E-16 102.8 13.4 277 27-323 16-333 (372)
38 KOG4314 Predicted carbohydrate 99.3 6.1E-12 1.3E-16 100.9 9.1 218 83-326 58-278 (290)
39 PF13536 EmrE: Multidrug resis 99.3 1.3E-11 2.9E-16 94.3 9.6 104 48-158 2-107 (113)
40 PF03151 TPT: Triose-phosphate 99.3 2.2E-10 4.7E-15 92.7 14.3 138 186-324 1-153 (153)
41 PRK10532 threonine and homoser 99.2 6.3E-10 1.4E-14 99.9 18.0 137 12-158 146-282 (293)
42 PF05653 Mg_trans_NIPA: Magnes 99.2 2.6E-10 5.7E-15 101.7 14.8 277 11-327 4-295 (300)
43 KOG1582 UDP-galactose transpor 99.2 8.1E-10 1.7E-14 93.2 16.1 226 78-327 106-335 (367)
44 PRK11272 putative DMT superfam 99.2 5.2E-10 1.1E-14 100.5 16.2 138 12-157 148-285 (292)
45 PRK13499 rhamnose-proton sympo 99.2 2.4E-08 5.2E-13 89.9 24.6 301 12-325 5-342 (345)
46 PLN00411 nodulin MtN21 family 99.2 1.4E-09 3.1E-14 99.7 17.1 138 13-159 188-330 (358)
47 PRK15430 putative chlorampheni 99.2 4.6E-10 1E-14 101.0 13.7 138 182-323 5-144 (296)
48 TIGR00688 rarD rarD protein. T 99.1 1.3E-09 2.7E-14 96.1 12.8 136 185-323 2-141 (256)
49 TIGR03340 phn_DUF6 phosphonate 99.1 2E-09 4.3E-14 96.2 13.8 133 187-324 3-135 (281)
50 PRK11689 aromatic amino acid e 99.1 4.4E-09 9.6E-14 94.6 15.4 134 12-157 154-287 (295)
51 TIGR00803 nst UDP-galactose tr 99.1 3.8E-09 8.2E-14 91.0 13.3 209 104-322 3-222 (222)
52 PRK11453 O-acetylserine/cystei 99.0 1.6E-08 3.5E-13 91.1 16.4 138 13-157 142-287 (299)
53 PRK02971 4-amino-4-deoxy-L-ara 98.9 3.2E-08 7E-13 76.7 12.6 123 185-328 2-126 (129)
54 TIGR00817 tpt Tpt phosphate/ph 98.9 1.6E-08 3.4E-13 91.4 12.6 139 12-157 143-293 (302)
55 COG4975 GlcU Putative glucose 98.9 4.2E-10 9E-15 93.7 1.1 278 14-323 2-284 (288)
56 PF13536 EmrE: Multidrug resis 98.8 1.6E-08 3.5E-13 77.2 8.6 108 220-328 3-110 (113)
57 TIGR00776 RhaT RhaT L-rhamnose 98.8 1.8E-07 3.9E-12 83.8 14.0 129 13-157 151-288 (290)
58 PF03151 TPT: Triose-phosphate 98.8 3.7E-07 7.9E-12 73.7 14.3 133 15-154 1-150 (153)
59 COG0697 RhaT Permeases of the 98.7 6.8E-07 1.5E-11 79.9 16.3 135 12-157 152-287 (292)
60 COG2962 RarD Predicted permeas 98.7 1.5E-07 3.2E-12 81.1 11.0 140 184-326 6-146 (293)
61 KOG2922 Uncharacterized conser 98.7 2.8E-08 6.1E-13 86.4 6.6 274 11-327 18-309 (335)
62 PTZ00343 triose or hexose phos 98.7 7E-07 1.5E-11 82.2 15.8 139 12-156 192-347 (350)
63 PRK15051 4-amino-4-deoxy-L-ara 98.6 1E-06 2.2E-11 66.7 12.4 70 81-156 39-108 (111)
64 PRK15051 4-amino-4-deoxy-L-ara 98.6 5.3E-07 1.2E-11 68.2 8.8 66 258-323 43-108 (111)
65 COG5006 rhtA Threonine/homoser 98.5 2.8E-06 6.1E-11 71.6 12.9 139 9-156 143-281 (292)
66 PRK02971 4-amino-4-deoxy-L-ara 98.5 3.2E-06 7E-11 65.6 12.6 119 14-157 2-122 (129)
67 PF06027 DUF914: Eukaryotic pr 98.5 4.4E-06 9.6E-11 75.4 14.7 141 10-158 164-306 (334)
68 KOG4510 Permease of the drug/m 98.3 1.9E-07 4.1E-12 79.0 0.8 137 182-326 35-171 (346)
69 PF06800 Sugar_transport: Suga 98.2 3.3E-05 7.2E-10 67.1 12.8 117 10-134 134-250 (269)
70 PF08449 UAA: UAA transporter 98.2 4.3E-05 9.4E-10 69.0 14.1 129 196-330 11-142 (303)
71 PRK10452 multidrug efflux syst 98.1 1.1E-05 2.5E-10 61.3 7.2 69 259-327 37-106 (120)
72 PF05653 Mg_trans_NIPA: Magnes 98.1 2.8E-05 6.1E-10 69.6 10.6 121 181-326 3-124 (300)
73 PF04657 DUF606: Protein of un 98.0 0.00022 4.8E-09 56.1 12.8 132 186-321 2-138 (138)
74 PRK09541 emrE multidrug efflux 97.8 6.6E-05 1.4E-09 56.4 6.8 68 259-326 37-105 (110)
75 PF06379 RhaT: L-rhamnose-prot 97.8 0.024 5.3E-07 50.7 23.1 299 12-324 5-340 (344)
76 PRK10650 multidrug efflux syst 97.8 0.00053 1.1E-08 51.3 10.5 64 86-155 42-106 (109)
77 PRK10452 multidrug efflux syst 97.7 0.00017 3.7E-09 54.9 7.8 68 84-157 35-103 (120)
78 COG3238 Uncharacterized protei 97.7 0.00081 1.7E-08 53.0 11.6 139 184-325 4-147 (150)
79 PRK09541 emrE multidrug efflux 97.7 0.00024 5.1E-09 53.4 8.1 67 85-157 36-103 (110)
80 COG2076 EmrE Membrane transpor 97.7 0.00026 5.6E-09 52.1 7.4 66 85-156 36-102 (106)
81 PF04142 Nuc_sug_transp: Nucle 97.6 0.00026 5.7E-09 61.5 8.3 80 249-329 15-94 (244)
82 COG2076 EmrE Membrane transpor 97.6 0.00026 5.5E-09 52.2 6.3 66 260-325 38-104 (106)
83 PRK11431 multidrug efflux syst 97.6 0.00052 1.1E-08 51.1 8.0 65 86-156 36-101 (105)
84 PF10639 UPF0546: Uncharacteri 97.5 0.00021 4.5E-09 53.6 5.6 110 20-155 2-112 (113)
85 PRK10650 multidrug efflux syst 97.5 0.0015 3.3E-08 48.9 10.2 64 260-323 43-107 (109)
86 PF04657 DUF606: Protein of un 97.5 0.0027 5.9E-08 50.0 12.2 130 16-154 3-138 (138)
87 PRK11431 multidrug efflux syst 97.5 0.00044 9.6E-09 51.4 6.8 66 259-324 36-102 (105)
88 KOG2765 Predicted membrane pro 97.5 0.001 2.3E-08 59.5 10.2 142 11-158 244-391 (416)
89 PRK13499 rhamnose-proton sympo 97.4 0.0092 2E-07 54.2 15.6 146 10-157 170-341 (345)
90 KOG1441 Glucose-6-phosphate/ph 97.3 0.00092 2E-08 59.8 7.9 138 12-157 161-307 (316)
91 PF00893 Multi_Drug_Res: Small 97.2 0.0013 2.8E-08 48.1 6.1 57 259-315 36-93 (93)
92 PF07857 DUF1632: CEO family ( 97.1 0.0083 1.8E-07 52.1 11.2 186 15-211 1-209 (254)
93 PF00893 Multi_Drug_Res: Small 97.0 0.0071 1.5E-07 44.1 8.7 58 85-148 35-93 (93)
94 PF10639 UPF0546: Uncharacteri 96.9 0.011 2.3E-07 44.5 8.7 109 192-322 3-112 (113)
95 PF07857 DUF1632: CEO family ( 96.7 0.0037 8.1E-08 54.2 5.9 131 186-328 1-138 (254)
96 KOG2922 Uncharacterized conser 96.7 0.0019 4E-08 56.9 3.8 127 180-330 16-142 (335)
97 COG4975 GlcU Putative glucose 96.6 0.0021 4.6E-08 54.3 3.8 135 186-330 3-142 (288)
98 KOG2234 Predicted UDP-galactos 96.3 0.15 3.3E-06 45.8 13.8 141 187-328 17-168 (345)
99 TIGR00803 nst UDP-galactose tr 96.3 0.018 3.9E-07 49.4 7.7 59 89-153 162-220 (222)
100 KOG4314 Predicted carbohydrate 96.3 0.0063 1.4E-07 49.7 4.5 65 264-328 65-129 (290)
101 COG3238 Uncharacterized protei 96.1 0.12 2.7E-06 40.8 10.9 136 13-155 4-144 (150)
102 KOG1581 UDP-galactose transpor 95.7 0.17 3.7E-06 44.5 10.7 139 11-157 169-313 (327)
103 KOG1580 UDP-galactose transpor 95.3 0.23 4.9E-06 42.1 9.7 138 13-157 171-313 (337)
104 KOG1444 Nucleotide-sugar trans 95.2 0.29 6.3E-06 43.5 10.7 139 12-157 155-300 (314)
105 COG5070 VRG4 Nucleotide-sugar 94.6 0.25 5.3E-06 41.5 8.1 137 14-157 155-296 (309)
106 PF06379 RhaT: L-rhamnose-prot 93.4 0.27 5.9E-06 44.2 6.8 141 182-326 4-155 (344)
107 KOG4831 Unnamed protein [Funct 93.4 1.3 2.8E-05 32.4 8.9 110 18-155 7-123 (125)
108 KOG2766 Predicted membrane pro 91.2 0.17 3.7E-06 43.4 2.6 139 182-328 15-154 (336)
109 KOG3912 Predicted integral mem 90.9 0.48 1E-05 41.3 5.0 66 260-325 94-159 (372)
110 KOG1443 Predicted integral mem 90.6 3.2 7E-05 36.8 9.9 125 202-327 33-159 (349)
111 KOG1442 GDP-fucose transporter 90.0 0.39 8.5E-06 41.7 3.7 142 12-160 183-330 (347)
112 KOG1583 UDP-N-acetylglucosamin 86.8 11 0.00023 33.2 10.4 137 11-158 161-315 (330)
113 PRK02237 hypothetical protein; 86.2 4 8.6E-05 30.2 6.5 47 280-326 61-107 (109)
114 KOG1582 UDP-galactose transpor 86.2 6.9 0.00015 34.2 8.9 140 13-159 189-334 (367)
115 PF02694 UPF0060: Uncharacteri 83.3 2.1 4.6E-05 31.5 4.0 48 280-327 59-106 (107)
116 PRK13108 prolipoprotein diacyl 78.0 67 0.0015 30.8 18.8 46 281-326 226-276 (460)
117 COG1742 Uncharacterized conser 76.1 19 0.00041 26.4 6.8 48 280-327 60-107 (109)
118 PF07168 Ureide_permease: Urei 75.8 1.8 3.9E-05 38.3 1.9 129 19-154 1-143 (336)
119 PF04342 DUF486: Protein of un 74.3 3.9 8.4E-05 30.1 3.0 31 293-323 77-107 (108)
120 PF06570 DUF1129: Protein of u 71.6 60 0.0013 27.3 12.1 31 77-108 145-175 (206)
121 PRK02237 hypothetical protein; 71.0 40 0.00088 25.0 10.7 40 112-157 66-105 (109)
122 PF05297 Herpes_LMP1: Herpesvi 70.4 1.4 3E-05 38.4 0.0 44 106-155 50-95 (381)
123 PF11044 TMEMspv1-c74-12: Plec 66.7 1.6 3.4E-05 26.3 -0.3 17 304-320 2-18 (49)
124 PRK06638 NADH:ubiquinone oxido 66.7 76 0.0017 26.6 12.8 35 293-327 133-169 (198)
125 KOG4831 Unnamed protein [Funct 66.2 13 0.00029 27.3 4.3 59 264-322 64-123 (125)
126 COG3169 Uncharacterized protei 64.5 9.3 0.0002 27.6 3.1 32 293-324 84-115 (116)
127 PF02694 UPF0060: Uncharacteri 62.8 31 0.00067 25.6 5.6 42 110-157 62-103 (107)
128 PF15102 TMEM154: TMEM154 prot 60.1 6.2 0.00014 31.0 1.8 23 310-332 67-89 (146)
129 PF07168 Ureide_permease: Urei 59.1 2.3 4.9E-05 37.7 -0.8 130 191-323 2-145 (336)
130 PF07698 7TM-7TMR_HD: 7TM rece 51.9 1.3E+02 0.0029 24.7 18.4 34 201-235 118-151 (194)
131 PF08507 COPI_assoc: COPI asso 51.6 16 0.00034 28.6 2.9 13 309-321 90-102 (136)
132 PF06123 CreD: Inner membrane 48.7 2.5E+02 0.0054 26.8 14.7 63 121-211 313-377 (430)
133 PF15471 TMEM171: Transmembran 47.1 17 0.00036 31.6 2.5 18 306-323 161-178 (319)
134 PF04342 DUF486: Protein of un 47.1 1.2E+02 0.0025 22.6 7.5 33 117-155 74-106 (108)
135 PF03547 Mem_trans: Membrane t 43.5 2.7E+02 0.0058 25.7 10.8 18 251-268 62-79 (385)
136 COG3086 RseC Positive regulato 41.4 17 0.00036 28.6 1.5 29 272-300 68-96 (150)
137 PRK10666 ammonium transporter; 38.8 3.6E+02 0.0077 25.8 17.2 50 185-235 305-354 (428)
138 TIGR02865 spore_II_E stage II 38.0 4.8E+02 0.01 27.1 15.0 44 106-155 11-54 (764)
139 PRK10599 calcium/sodium:proton 36.0 3.6E+02 0.0079 25.1 14.3 21 257-277 112-132 (366)
140 COG4657 RnfA Predicted NADH:ub 35.8 2.4E+02 0.0051 22.8 12.2 67 147-233 114-185 (193)
141 COG1742 Uncharacterized conser 35.7 30 0.00064 25.5 1.9 40 112-157 65-104 (109)
142 COG4858 Uncharacterized membra 33.8 2.8E+02 0.006 23.0 10.8 104 15-126 101-205 (226)
143 PRK10473 multidrug efflux syst 32.9 3.9E+02 0.0084 24.5 25.0 14 117-130 168-181 (392)
144 PRK11715 inner membrane protei 32.1 4.6E+02 0.01 25.1 14.2 59 125-211 323-383 (436)
145 TIGR02840 spore_YtaF putative 30.9 41 0.00088 28.4 2.4 45 279-323 34-80 (206)
146 PF11023 DUF2614: Protein of u 29.6 1E+02 0.0022 23.1 3.9 17 141-157 12-28 (114)
147 PF09656 PGPGW: Putative trans 28.8 1.6E+02 0.0035 18.8 4.9 45 141-210 5-49 (53)
148 PF15048 OSTbeta: Organic solu 28.4 20 0.00044 27.2 0.1 23 301-323 29-55 (125)
149 TIGR03810 arg_ornith_anti argi 28.0 5.4E+02 0.012 24.6 17.0 22 306-327 411-432 (468)
150 PF01102 Glycophorin_A: Glycop 27.5 27 0.00059 26.7 0.7 9 310-318 75-83 (122)
151 COG4858 Uncharacterized membra 26.8 3.7E+02 0.0081 22.3 7.6 72 78-156 127-207 (226)
152 PF15099 PIRT: Phosphoinositid 24.6 40 0.00087 25.7 1.1 17 252-268 57-73 (129)
153 PF15108 TMEM37: Voltage-depen 24.3 3.8E+02 0.0082 21.5 6.8 72 141-225 91-164 (184)
154 PF06645 SPC12: Microsomal sig 24.3 1.3E+02 0.0029 20.8 3.6 42 285-326 17-58 (76)
155 KOG4332 Predicted sugar transp 24.0 5.4E+02 0.012 23.2 10.8 25 277-301 375-399 (454)
156 PRK02935 hypothetical protein; 23.6 1.5E+02 0.0033 21.9 3.9 22 129-156 7-28 (110)
157 PF10951 DUF2776: Protein of u 23.6 5.4E+02 0.012 23.1 13.2 124 112-235 80-210 (347)
158 PF08693 SKG6: Transmembrane a 23.2 46 0.001 19.9 1.0 18 311-328 22-39 (40)
159 PF04246 RseC_MucC: Positive r 23.1 37 0.00081 26.3 0.8 24 277-300 66-89 (135)
160 KOG3817 Uncharacterized conser 23.0 3.5E+02 0.0076 25.0 6.7 28 26-54 201-228 (452)
161 PRK10054 putative transporter; 22.6 6.1E+02 0.013 23.4 12.1 15 197-211 56-70 (395)
162 TIGR00905 2A0302 transporter, 22.5 6.9E+02 0.015 23.9 17.2 41 286-327 396-437 (473)
163 PRK11469 hypothetical protein; 21.8 59 0.0013 27.0 1.7 44 280-323 42-86 (188)
164 PF10101 DUF2339: Predicted me 21.5 8.9E+02 0.019 24.8 27.4 91 30-126 19-111 (745)
165 PF11361 DUF3159: Protein of u 21.1 4.9E+02 0.011 21.6 7.3 72 107-203 28-99 (187)
166 TIGR01167 LPXTG_anchor LPXTG-m 20.9 66 0.0014 17.9 1.3 18 305-322 11-28 (34)
167 TIGR00544 lgt prolipoprotein d 20.8 2.5E+02 0.0053 25.0 5.5 23 304-326 246-268 (278)
168 PF05961 Chordopox_A13L: Chord 20.6 39 0.00085 22.6 0.3 20 308-327 6-25 (68)
169 PHA03049 IMV membrane protein; 20.1 38 0.00083 22.5 0.2 20 308-327 6-25 (68)
170 TIGR00881 2A0104 phosphoglycer 20.0 6.2E+02 0.013 22.4 10.8 16 196-211 42-57 (379)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=289.45 Aligned_cols=322 Identities=21% Similarity=0.476 Sum_probs=254.4
Q ss_pred CccchhhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcccc-CCccCHHHHHHHH
Q 018804 4 SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKI-RPKLTLALFLEIF 82 (350)
Q Consensus 4 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~ 82 (350)
++|+-+.|+.+.+..++...+.++...++.|.+.+.|++|+.+.++|+.++.++++++.+.++|++ .++.+++++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~ 82 (358)
T PLN00411 3 GTVSLWRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIG 82 (358)
T ss_pred cchhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 345556778999999999999999999999999999999999999999999999999987654422 3445678889999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHh------ccccccccccccchhhHHHHHHHHHHHHh
Q 018804 83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLR------LETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~------~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
+.|+++ .+.+.+++.+++|+++++++++.++.|+++.+++++++ |||+++. +++|+++++.|+.++.
T Consensus 83 l~g~~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 83 LLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHH
Confidence 999997 66778999999999999999999999999999999994 6666666 9999999999999987
Q ss_pred hccCCCCCCC---CCCCccCcc--cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHH
Q 018804 157 VYKGPAARNP---GHPPIHIQR--NNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAV 231 (350)
Q Consensus 157 ~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 231 (350)
.++++..... .+-+.++.. ......+...|++++++++++|++|++.+|+..+++++....++++..++.+...+
T Consensus 156 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 235 (358)
T PLN00411 156 FYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSM 235 (358)
T ss_pred HccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHH
Confidence 6444211000 000000000 00112344679999999999999999999999988855556677777777776666
Q ss_pred HHHHHhc-CCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhh
Q 018804 232 FTVIVAR-KPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIV 310 (350)
Q Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~i 310 (350)
.....+. +...|..........+++.+++ +.++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i 314 (358)
T PLN00411 236 IGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI 314 (358)
T ss_pred HHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 6665443 2223322122234457777765 6789999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhheeeeecccCCcchh
Q 018804 311 GAVVVIGGLYLLLWGKEGDHQEA 333 (350)
Q Consensus 311 G~~li~~g~~l~~~~~~~~~~~~ 333 (350)
|++++++|+++..+.++|+.|++
T Consensus 315 G~~LIl~Gv~l~~~~~~~~~~~~ 337 (358)
T PLN00411 315 GGILITLGFYAVMWGKANEEKDQ 337 (358)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhc
Confidence 99999999999988776655433
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=248.88 Aligned_cols=280 Identities=15% Similarity=0.158 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL 93 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 93 (350)
.-.+..+...++||.+.+..|...++ ++|.+++++|+.++.++++++...+++ + ..+++++......|.++...++
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHH
Confidence 34567788899999999999998886 999999999999999998888654322 2 2356778888888988777788
Q ss_pred HHHHHhh-hccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 018804 94 NMYFASL-RYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIH 172 (350)
Q Consensus 94 ~~~~~al-~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 172 (350)
.+++.+. +++++++++++.++.|+++.+++++ +|||++++ ++++++++++|+.++... ++
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~~----------- 144 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-GN----------- 144 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-cc-----------
Confidence 8999999 9999999999999999999999985 69999999 999999999999988531 10
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHH
Q 018804 173 IQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLW 252 (350)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (350)
. +....|++++++++++|+.|.+..|+..++ ++...+.++...+.+...+.....+.+.. ...+...|.
T Consensus 145 ------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 213 (292)
T PRK11272 145 ------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFL 213 (292)
T ss_pred ------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHH
Confidence 0 122479999999999999999999887654 44556677877887777776654322211 112345788
Q ss_pred HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
.+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus 214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999998876544
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=246.78 Aligned_cols=279 Identities=16% Similarity=0.211 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHH
Q 018804 16 LLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNM 95 (350)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 95 (350)
.++.++++++||.++++.|...++ ++|.++.++|+.++.+.+.++. + ++ +.++ ......|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~---~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPL---NLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--c-CC---CCch---HHHHHHHHHHHHHHHHH
Confidence 466888999999999999999887 9999999999999877766553 2 21 1122 23444566544556667
Q ss_pred HHHhhhc-cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804 96 YFASLRY-TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ 174 (350)
Q Consensus 96 ~~~al~~-~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 174 (350)
++.++++ .+++.++++.+++|+++.+++++++|||++++ ++++++++++|+.++...+.
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~~~-------------- 135 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIEDSL-------------- 135 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccccC--------------
Confidence 8889998 57899999999999999999999999999999 99999999999998863211
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCc--hhHHHHHHHHHHHHHHHHHHHHHhcCC---ccccccchh
Q 018804 175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPA--QLSLTTWMCFLGAAQSAVFTVIVARKP---ADWRIGLNI 249 (350)
Q Consensus 175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~ 249 (350)
+.......|+++++.++++|+.|.+..|+..++.++ ......+....+.+.........+... ..+...+..
T Consensus 136 ---~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (299)
T PRK11453 136 ---NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMT 212 (299)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHH
Confidence 111122479999999999999999999998766522 233344444444433333333222211 112223445
Q ss_pred hHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 250 DLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 250 ~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
.|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||.+++.+++|++++++|+++..+.++
T Consensus 213 ~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 213 TILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 799999999999999999999999999999999999999999999999999999999999999999999998776554
No 4
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=2.5e-32 Score=244.91 Aligned_cols=284 Identities=11% Similarity=0.077 Sum_probs=225.7
Q ss_pred CCccchhhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHH
Q 018804 3 PSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIF 82 (350)
Q Consensus 3 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (350)
|++.++ ..+.+++.+++++++.|+..+.+.|++.++ .+|..+.++|++++.++++++... ++ .+.+++++...+
T Consensus 2 ~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~ 75 (293)
T PRK10532 2 PGSLRK-LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLL 75 (293)
T ss_pred CCcccc-cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHH
Confidence 334433 345889999999999999999999999998 999999999999999998876422 11 134567788888
Q ss_pred HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCC
Q 018804 83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPA 162 (350)
Q Consensus 83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~ 162 (350)
..|.+ .+..+.+++++++++|++.++++..+.|+++.+++. ||. . +..++.++++|+.++... +.
T Consensus 76 ~~g~~-~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~------~~~~~~i~~~Gv~li~~~-~~- 140 (293)
T PRK10532 76 FYGVS-LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--V------DFVWVVLAVLGLWFLLPL-GQ- 140 (293)
T ss_pred HHHHH-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--H------HHHHHHHHHHHHheeeec-CC-
Confidence 88887 677889999999999999999999999999988763 443 3 445677889999887532 11
Q ss_pred CCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018804 163 ARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPAD 242 (350)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (350)
+.......|++++++++++|+.|.+..|+..++. ++... .+....+++...+.....+.. ..
T Consensus 141 ---------------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~ 202 (293)
T PRK10532 141 ---------------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE-AL 202 (293)
T ss_pred ---------------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc-cc
Confidence 0111225799999999999999999999998776 66555 455566666666655543211 11
Q ss_pred ccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804 243 WRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL 322 (350)
Q Consensus 243 ~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~ 322 (350)
.+...|...+++|++++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|++..
T Consensus 203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 12234666789999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred eecccC
Q 018804 323 LWGKEG 328 (350)
Q Consensus 323 ~~~~~~ 328 (350)
.+..+|
T Consensus 280 ~~~~~~ 285 (293)
T PRK10532 280 TLTIRR 285 (293)
T ss_pred HhcCCC
Confidence 766544
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=6e-32 Score=242.68 Aligned_cols=285 Identities=13% Similarity=0.035 Sum_probs=215.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
+.++++++++++++||.+++..|...++ ++|..+.++|+.++.++++++.. +++. ++ +.++....+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~~-~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---RQ-FPKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---cc-ccHHHHHHHhHHHHH
Confidence 4567889999999999999999999987 99999999999999999887631 2111 11 122334445555677
Q ss_pred HHHHHHHhhhc----cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804 92 TLNMYFASLRY----TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG 167 (350)
Q Consensus 92 ~~~~~~~al~~----~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 167 (350)
+..+++.++++ .++++++++.++.|+++.+++++++|||++++ +++|++++++|++++...+.+....
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~~~~~~~-- 145 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGDNGLSLA-- 145 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCCccchhh--
Confidence 77778877765 56788899999999999999999999999999 9999999999999987421100000
Q ss_pred CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804 168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (350)
. .+ ........|+++++.++++|+.|+++.|+..++. ++..... ..+.+...+.....+ .. . ...+
T Consensus 146 ---~-~~---~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-~-~~~~ 211 (295)
T PRK11689 146 ---E-LI---NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-A-MVFS 211 (295)
T ss_pred ---h-hh---hccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-c-ccCC
Confidence 0 00 0001224699999999999999999999998776 6554322 223333333333222 11 1 1123
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++....++
T Consensus 212 ~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 212 LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 346777777774 7899999999999999999999999999999999999999999999999999999999888765443
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=1.9e-31 Score=239.49 Aligned_cols=279 Identities=12% Similarity=0.057 Sum_probs=208.8
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccC--C-ccCHHHHHHHHHHHH
Q 018804 10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR--P-KLTLALFLEIFVLSL 86 (350)
Q Consensus 10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~ 86 (350)
.++.+|.+++++++++||..+++.|.. ++ ++|.++.++|+.++.+++.++...++++.. + ..+++++. ....+.
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHH
Confidence 356789999999999999999999985 55 999999999999999988777654422111 0 11333333 344666
Q ss_pred HHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 018804 87 VGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNP 166 (350)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~ 166 (350)
++.+.++.++++|++++++++++++.++.|+++.+++++++|||++++ ++.+++++++|++++...++
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~------ 148 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG------ 148 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC------
Confidence 668889999999999999999999999999999999999999999999 99999999999999864211
Q ss_pred CCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q 018804 167 GHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWRI 245 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (350)
+. ..++++++++|+.|.+..|+..++.. +....+.+....+.+...+. .......+..
T Consensus 149 -----------~~-------~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 207 (296)
T PRK15430 149 -----------SL-------PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQ 207 (296)
T ss_pred -----------Cc-------cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccC
Confidence 00 14578899999999999888754321 12222333333333222111 1111111111
Q ss_pred cchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804 246 GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 246 ~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~ 325 (350)
.+...+..++..|+ .+.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+.+....
T Consensus 208 ~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 208 NPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11112334444454 68899999999999999999999999999999999999999999999999999998887776543
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=3.1e-31 Score=234.50 Aligned_cols=258 Identities=17% Similarity=0.264 Sum_probs=219.4
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 018804 26 YTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSP 105 (350)
Q Consensus 26 ~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 105 (350)
||.+++..|...++..++....+.|...+.+++.++... + .+++++.+....|.++..+++.++++|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 889999999988766899999999999998888776432 2 245567788888888899999999999999999
Q ss_pred chhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhh
Q 018804 106 TFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLK 185 (350)
Q Consensus 106 ~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (350)
++++++.+++|+++.+++++++|||++++ +++|++++++|+.++... + +......
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~~-~------------------~~~~~~~ 128 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLSD-G------------------NLSINPA 128 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhccC-C------------------cccccHH
Confidence 99999999999999999999999999999 999999999999998632 1 0112367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGL 264 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~ 264 (350)
|+.+++.++++|+.+.+..|+..++.+ ++.....+.+..+.+...+.....++.. . .+...|..+++.+++++.+
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988762 2344555677788888777766543221 1 1345677788889999999
Q ss_pred HHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804 265 IVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL 319 (350)
Q Consensus 265 ~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~ 319 (350)
++.+|++++++.++.+++.+.+++|+++++++++++||+++..+++|+.+++.|+
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999886
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-30 Score=235.17 Aligned_cols=284 Identities=14% Similarity=0.122 Sum_probs=222.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHH
Q 018804 17 LLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMY 96 (350)
Q Consensus 17 ~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 96 (350)
++.+...++.....+.+|++.++-..|..+++.|+.++.+.+.+.. ..+.+++++.+++++...+..|++ ..+++.+.
T Consensus 5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 82 (302)
T TIGR00817 5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIV-HTIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHH
Confidence 4455556666667788999988635689999999998877765552 122233446778899999999999 68889999
Q ss_pred HHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCccc
Q 018804 97 FASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRN 176 (350)
Q Consensus 97 ~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~ 176 (350)
+++++|+++++++++.++.|+++++++++++|||++++ ++.+++++++|+.+... +
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~---------------- 138 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T---------------- 138 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C----------------
Confidence 99999999999999999999999999999999999999 99999999999987632 1
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--hcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc---ccc-----c
Q 018804 177 NIIQEQWLKGSFLTIASSITWSAMYIMQAITLK--RYPAQLSLTTWMCFLGAAQSAVFTVIVARKPAD---WRI-----G 246 (350)
Q Consensus 177 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~-----~ 246 (350)
+......|++++++++++|++|.+..|+..+ +. |+...+.++...+.+..+|.....+..... +.. .
T Consensus 139 --~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T TIGR00817 139 --ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVN 215 (302)
T ss_pred --cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccC
Confidence 1112256999999999999999999999987 56 889999999999999999887765431100 000 0
Q ss_pred chhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 247 LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 247 ~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
....+...+..++.+....+.++++++++.++++.+...+++|++++++|++++||++|..+++|.+++++|++++.+.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 00112112233332333333466689999999999999999999999999999999999999999999999999998665
Q ss_pred cCC
Q 018804 327 EGD 329 (350)
Q Consensus 327 ~~~ 329 (350)
.++
T Consensus 296 ~~~ 298 (302)
T TIGR00817 296 AQK 298 (302)
T ss_pred ccC
Confidence 443
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.97 E-value=1.3e-28 Score=219.80 Aligned_cols=275 Identities=13% Similarity=0.163 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhc-cccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804 16 LLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLE-RKIRPKLTLALFLEIFVLSLVGVTLTLN 94 (350)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (350)
.++.++++++|+..++..|...++ -++. .+++.....+.+.|+...+. ++.++..+ ++++.....+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence 567889999999999999966554 3443 46677777777777765432 22222233 3344455555555888999
Q ss_pred HHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804 95 MYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ 174 (350)
Q Consensus 95 ~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 174 (350)
++++++++.+++.++++.++.|+++.+++++++|||++++ +++|+.+++.|+.++...+.
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~~-------------- 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSRF-------------- 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcccc--------------
Confidence 9999999999999999999999999999999999999999 99999999999998864211
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHH-HHHHHHHh-cCCccccccchhhHH
Q 018804 175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQS-AVFTVIVA-RKPADWRIGLNIDLW 252 (350)
Q Consensus 175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~~~~~~~~~ 252 (350)
. .....|+.++++++++|+.|.+..|+..++. ++..........+.+.. .++..... .+...+. .....++
T Consensus 139 ---~--~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 211 (281)
T TIGR03340 139 ---A--QHRRKAYAWALAAALGTAIYSLSDKAAALGV-PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF-PYARQIL 211 (281)
T ss_pred ---c--ccchhHHHHHHHHHHHHHHhhhhccccccch-hcccccHHHHHHHHHHHHHHHHHHHHHHhccchh-hhHHHHH
Confidence 0 1113577889999999999999988765544 32221111111222111 22222111 0111111 1223455
Q ss_pred HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhhee
Q 018804 253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYL 321 (350)
Q Consensus 253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l 321 (350)
..++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 667777788999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.97 E-value=6.5e-28 Score=215.15 Aligned_cols=301 Identities=15% Similarity=0.164 Sum_probs=235.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccc-cCCccCHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERK-IRPKLTLALFLEIFVLSLVGV 89 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 89 (350)
-.+..++.=..+++-+.+...+.+..+.|.+ |....++-++.-.++..++...++++ +..+..+++|++.++.+++ .
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~-D 89 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL-D 89 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH-H
Confidence 3455555556667777777888777766666 77777777777777766666555433 2233445678888889999 7
Q ss_pred HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804 90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP 169 (350)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 169 (350)
+.++++.+.|++|++.+.++++.+++.+++++++++++|||+++. +++|+++++.|+.++...|....
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~------ 157 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSG------ 157 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccc------
Confidence 789999999999999999999999999999999999999999999 99999999999999876432211
Q ss_pred CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccccch
Q 018804 170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLN 248 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~ 248 (350)
+++....+..+|+++++.+++.||+++++.++..++. +.........+++.+++.+...+.+. .....++..
T Consensus 158 -----~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~- 230 (334)
T PF06027_consen 158 -----SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS- 230 (334)
T ss_pred -----ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-
Confidence 1112345668999999999999999999999999988 77778888888888888888776654 222222222
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
..+..++. ..++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++++.|.+++...+++
T Consensus 231 ~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 231 QVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 22333332 23356667777788899999999999999999999999999999999999999999999999999977665
Q ss_pred Ccchh
Q 018804 329 DHQEA 333 (350)
Q Consensus 329 ~~~~~ 333 (350)
.++++
T Consensus 310 ~~~~~ 314 (334)
T PF06027_consen 310 EEEAR 314 (334)
T ss_pred ccccc
Confidence 54433
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=1.7e-27 Score=217.94 Aligned_cols=284 Identities=14% Similarity=0.155 Sum_probs=225.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCcc--CHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKL--TLALFLEIFVLSLVG 88 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 88 (350)
+.+..++.+....+........|.+++. ++ |..++.+|++++.+++..+.... .+++++. .++++...+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4566777788888888889999999998 99 99999999999988765553222 2222333 345778899999996
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH 168 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~ 168 (350)
.. .+...+.|+++++++.++++.++.|+++++++++++|||++++ ++.+++++++|+.+....
T Consensus 125 ~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~---------- 187 (350)
T PTZ00343 125 LF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVK---------- 187 (350)
T ss_pred HH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheecc----------
Confidence 55 4666779999999999999999999999999999999999999 999999999999998631
Q ss_pred CCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC------chhHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018804 169 PPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP------AQLSLTTWMCFLGAAQSAVFTVIVARKP-- 240 (350)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~-- 240 (350)
+.+ ....|++++++|+++|++++++.|+..++.+ ++.....+....+.++++|+....+...
T Consensus 188 ---------~~~-~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~ 257 (350)
T PTZ00343 188 ---------ELH-FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV 257 (350)
T ss_pred ---------cch-hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 112 2367999999999999999999999887541 3555666668889999998887554211
Q ss_pred cccc----ccchhhHHHHHHHhHhHHHHHHHHHHH----hhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhh
Q 018804 241 ADWR----IGLNIDLWSTIYGGVVVSGLIVFIQLW----CTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGA 312 (350)
Q Consensus 241 ~~~~----~~~~~~~~~~l~~gi~~~~~~~~~~~~----a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~ 312 (350)
..+. ......+..+++ .++.+++++.+++. +++++++.+.+...+++|+++++++++++||++|+.+++|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~ 336 (350)
T PTZ00343 258 PVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGM 336 (350)
T ss_pred HHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHH
Confidence 0110 001111223333 34567888888885 99999999999999999999999999999999999999999
Q ss_pred HHHhhhheeeeec
Q 018804 313 VVVIGGLYLLLWG 325 (350)
Q Consensus 313 ~li~~g~~l~~~~ 325 (350)
+++++|+++++.-
T Consensus 337 ~lii~Gv~lYs~~ 349 (350)
T PTZ00343 337 AVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999988754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=5.7e-26 Score=200.15 Aligned_cols=248 Identities=9% Similarity=0.128 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcccc-----CCccCHHH-HHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKI-----RPKLTLAL-FLEIFVLSLV 87 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 87 (350)
+|++++++++++||...++.|. .++ ++|.+++++|++++.+++.++...+++++ .++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 455 99999999999999988877654433211 11122222 4456667777
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG 167 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 167 (350)
.++++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|++++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 7889999999999999999999999999999999999999999999 99999999999998864211
Q ss_pred CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804 168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (350)
+. ..+++.++++|+.|.+..|+..++ +....... .........+.... ...........
T Consensus 146 ----------~~-------~~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 204 (256)
T TIGR00688 146 ----------SL-------PWEALVLAFSFTAYGLIRKALKNT--DLAGFCLE-TLSLMPVAIYYLLQ-TDFATVQQTNP 204 (256)
T ss_pred ----------Cc-------hHHHHHHHHHHHHHHHHHhhcCCC--CcchHHHH-HHHHHHHHHHHHHH-hccCcccccCc
Confidence 10 035788999999999998887653 32222111 11122222222211 11111111112
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHH
Q 018804 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFV 299 (350)
Q Consensus 248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~ 299 (350)
...|..+++.|++ +.++|.++++++|+.++++++.+.+++|+++.+++.++
T Consensus 205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 2468888888875 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=5.7e-24 Score=190.89 Aligned_cols=283 Identities=21% Similarity=0.314 Sum_probs=218.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT 90 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 90 (350)
+...+....++..+.|+......|...++..++....+.|...+.+...+..... +... ....+++......+.++..
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGL-RPALRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-cccc-cccccchHHHHHHHHHHHH
Confidence 3456778888888999999999999877535666666779998888844443221 1111 1122224566666777789
Q ss_pred HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHH-HHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804 91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAV-VLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP 169 (350)
Q Consensus 91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~-~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 169 (350)
.++.+++.++++++++.++++.++.|+++.++++ +++|||+++. ++.++.+++.|+.++...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~-------- 147 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGG-------- 147 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCc--------
Confidence 9999999999999999999999999999999997 7779999999 999999999999999753221
Q ss_pred CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHH-HHHHHHHHHHHHHHHHHhcCCccccccch
Q 018804 170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTT-WMCFLGAAQSAVFTVIVARKPADWRIGLN 248 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 248 (350)
.... ...|+++++.++++++++.+..|+.. +. ++..... +..........+... . +.. .....
T Consensus 148 --------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~--~~~~~ 211 (292)
T COG0697 148 --------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL--S-GFG--APILS 211 (292)
T ss_pred --------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh--c-ccc--ccCCH
Confidence 1111 57899999999999999999999888 44 5455544 333311222222211 1 111 12234
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~ 325 (350)
..+....+.|++++.+++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 57888899999988899999999999999999999999999999999999999999999999999999999988766
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.93 E-value=8.4e-24 Score=179.70 Aligned_cols=280 Identities=15% Similarity=0.122 Sum_probs=227.5
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccC---CccCHHHHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR---PKLTLALFLEIFVLSLV 87 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~ 87 (350)
+..+|++..+.+.++||..+.+.|.. ++ .++.++...|.+.+..+++.+....++.+. ...+++.+....+.+++
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 35689999999999999999999985 55 999999999999999998887765543221 13456667778888888
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG 167 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 167 (350)
...++..|.+|.....+-+++.-++..|++.++++.+++|||+++. |+++++++.+||...+...|+
T Consensus 82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~------ 148 (293)
T COG2962 82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS------ 148 (293)
T ss_pred -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC------
Confidence 8999999999999999999999999999999999999999999999 999999999999999875332
Q ss_pred CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804 168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (350)
-. ..++.-+++|+.|...-| ..+- |+.+-....+..-.+..+...+..++........+
T Consensus 149 --------------lp----wval~la~sf~~Ygl~RK-~~~v--~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~ 207 (293)
T COG2962 149 --------------LP----WVALALALSFGLYGLLRK-KLKV--DALTGLTLETLLLLPVALIYLLFLADSGQFLQQNA 207 (293)
T ss_pred --------------Cc----HHHHHHHHHHHHHHHHHH-hcCC--chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCC
Confidence 11 233555689999998833 3322 55555555566666666666665554432112234
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
...+..++..|.+ +++...++..+-|+++-+..+.++|.+|..-.+++.+++||+++..+++..+.+.+|+.++....-
T Consensus 208 ~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 208 NSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred chHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567777888875 999999999999999999999999999999999999999999999999999999999999886543
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.93 E-value=2.6e-23 Score=171.92 Aligned_cols=275 Identities=12% Similarity=0.067 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804 15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN 94 (350)
Q Consensus 15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (350)
++..++.+...--....+.|..... +.+..++.+|..++.++++++..- .+.+.+++++......|+. .+..|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvs-Lg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVS-LGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHH-HHHHHH
Confidence 6788888888888888899999998 999999999999999998888532 2346788899999999999 888999
Q ss_pred HHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804 95 MYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ 174 (350)
Q Consensus 95 ~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 174 (350)
+||.+++.+|.+.+..+.++.|+.+.+++. + +.+ +.+.+.+++.|..++.. .++
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~------d~vwvaLAvlGi~lL~p-~~~------------- 140 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLR------DFVWVALAVLGIWLLLP-LGQ------------- 140 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chh------hHHHHHHHHHHHHhhee-ccC-------------
Confidence 999999999999999999999998776543 1 234 88889999999998863 221
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHH
Q 018804 175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWST 254 (350)
Q Consensus 175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (350)
+...-...|..+++.++.||+.|.+..+|..+.. +...-....+.++.++.+|+..... .....++.....-
T Consensus 141 ---~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~a----g~~l~~p~ll~la 212 (292)
T COG5006 141 ---SVWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQA----GPALFSPSLLPLA 212 (292)
T ss_pred ---CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhc----chhhcChHHHHHH
Confidence 2233447899999999999999999999988765 6667777888889999999887432 2222344467777
Q ss_pred HHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCC
Q 018804 255 IYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGD 329 (350)
Q Consensus 255 l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~ 329 (350)
+.++++++++.|.+...++++.+....+++..+||.++.+.+++++||.+|..||+|+..++.+..-..+..+|+
T Consensus 213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 888999999999999999999999999999999999999999999999999999999999999988777655543
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.91 E-value=4.8e-22 Score=177.51 Aligned_cols=274 Identities=15% Similarity=0.138 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804 15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN 94 (350)
Q Consensus 15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (350)
+++++++++++||...+..|... |.++.++. |..++.+++..+....+++. +..++.+...+..|++ .+.++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 47889999999999999999865 58887775 67777777666554433211 2234445556667777 888999
Q ss_pred HHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccch----hhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804 95 MYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAK----VLGTLVSLAGVTIMTVYKGPAARNPGHP 169 (350)
Q Consensus 95 ~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 169 (350)
+++.+.++++.+.+..+.+ +.+++..+.+.+++||+.+++ + ++|++++++|+.++...+.+..+
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence 9999999999999999988 899999999999999999999 8 99999999998888543211000
Q ss_pred CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHH---HHHHHHHHHHHHHhcCCcccccc
Q 018804 170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCF---LGAAQSAVFTVIVARKPADWRIG 246 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~ 246 (350)
++...+...|..++++++++|+.|.+..|+. ++ +|....+.+.. .+..+..+.. ... .++ .
T Consensus 144 -------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~--~ 207 (290)
T TIGR00776 144 -------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPL--K 207 (290)
T ss_pred -------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---hcc-cch--H
Confidence 0000223679999999999999999998876 25 77777444444 3333222222 111 122 1
Q ss_pred chhhHHHHHHHhHhHHHHHHHHHHHhhc-cCCcchhhhhhhHHHHHHHHHHHHHhccccchhhh----hhhHHHhhhhee
Q 018804 247 LNIDLWSTIYGGVVVSGLIVFIQLWCTD-KRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSI----VGAVVVIGGLYL 321 (350)
Q Consensus 247 ~~~~~~~~l~~gi~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~----iG~~li~~g~~l 321 (350)
+..++.....|++ ..+++.+|..+.+ +.+++.++.+.+.+|+.+.+++++++||+.++.++ +|+++++.|+.+
T Consensus 208 -~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 208 -KYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI 285 (290)
T ss_pred -HHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence 2233334447887 7999999999999 99999999999999999999999999999999999 999999999887
Q ss_pred eee
Q 018804 322 LLW 324 (350)
Q Consensus 322 ~~~ 324 (350)
...
T Consensus 286 ~~~ 288 (290)
T TIGR00776 286 LGI 288 (290)
T ss_pred Hhc
Confidence 643
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=1.1e-24 Score=181.12 Aligned_cols=291 Identities=15% Similarity=0.173 Sum_probs=217.4
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT 90 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 90 (350)
+..+|..+..++.+ +....++.+...+ .+|.+..-.|++.-.++-.|....++.... .+......+++.|+.|+.
T Consensus 35 ~p~~gl~l~~vs~f-f~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG~t 109 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYF-FNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMGFT 109 (346)
T ss_pred CCccCceehhhHHH-HhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhhhh
Confidence 45678888888844 4444444444443 689999999988887777776544332221 111223445667777644
Q ss_pred HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 018804 91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPP 170 (350)
Q Consensus 91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~ 170 (350)
+....|||++|.+.++++++.+++|+++.+++|.++|||.++. +.++..+.+.||+++..+ +. .+.
T Consensus 110 -gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvRP--pF-lFG---- 175 (346)
T KOG4510|consen 110 -GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVRP--PF-LFG---- 175 (346)
T ss_pred -HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEecC--Cc-ccC----
Confidence 6667788999999999999999999999999999999999999 999999999999999743 21 111
Q ss_pred ccCcccchh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-ch
Q 018804 171 IHIQRNNII-QEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIG-LN 248 (350)
Q Consensus 171 ~~~~~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~ 248 (350)
.++++++.. .+....|...++.+++.-+--.+..|++-|+. |......|..+++++.+++.....+ .+..+ ..
T Consensus 176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cg 250 (346)
T KOG4510|consen 176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG----AVQLPHCG 250 (346)
T ss_pred CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc----ceecCccc
Confidence 111111111 23446778888888888888888889988887 6666666666666666665444322 22222 35
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
++|+.++.+|++ +++++.+...++|+..+..++++.+.+.+++.+++.++|||.||++.+.|+++++.+.+.....|
T Consensus 251 kdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 251 KDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred cceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 678888888986 78999999999999999999999999999999999999999999999999999999887776544
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.88 E-value=4.3e-20 Score=166.43 Aligned_cols=267 Identities=16% Similarity=0.187 Sum_probs=213.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHH
Q 018804 42 NPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFV 121 (350)
Q Consensus 42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~i 121 (350)
.|..+++.++....+...+.....++ ++.++..+...+..+++ ..++..+.+.|++|++.+...++.++.|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKF---PKSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccc---cCCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 48899999999988887776554431 23344456677777888 788999999999999999999999999999999
Q ss_pred HHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 018804 122 IAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMY 201 (350)
Q Consensus 122 l~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~ 201 (350)
++.+++|+|.+.. ++.++++..+|+.+....+.+.... .+........|+++.+.+.++.+...
T Consensus 107 ~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~----------~~~~~~~~~~G~~ll~~sl~~~a~~~ 170 (303)
T PF08449_consen 107 LGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS----------SNSSSFSSALGIILLLLSLLLDAFTG 170 (303)
T ss_pred HHHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc----------cccccccchhHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999997643321111 01122222349999999999999999
Q ss_pred HHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHH--HhcCCccc--cccchhhHHHHHHHhHhHHHHHHHHHHHhhccC
Q 018804 202 IMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVI--VARKPADW--RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKR 276 (350)
Q Consensus 202 v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~ 276 (350)
+++++..++++ ++....++...++.+...+.... .++....+ ....+..+..++...+ ++.+++.+.++..++.
T Consensus 171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~ 249 (303)
T PF08449_consen 171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKF 249 (303)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999998876 78889999999998888887776 22211111 1222334555555444 6788888889999999
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCC
Q 018804 277 GPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGD 329 (350)
Q Consensus 277 ~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~ 329 (350)
++...+++..++.++++++|++++++++++.+|+|.++++.|..++...++|+
T Consensus 250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999998877654
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=4.5e-20 Score=161.11 Aligned_cols=301 Identities=15% Similarity=0.177 Sum_probs=227.6
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCC--CchHHHHHHHHHHHHHHHHHH-------HhhccccC---------
Q 018804 9 VYLRFKPLLLMVLAQLSYTFLYFITEASFNHGM--NPHVYVTYRHIVAGIAMFPFA-------YFLERKIR--------- 70 (350)
Q Consensus 9 ~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~--~p~~~~~~r~~~~~l~l~~~~-------~~~~~~~~--------- 70 (350)
.+|...|+.++++...+|-.+..+.+...+++- .|+..++.....-.+.+.++. ...+|.++
T Consensus 9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~ 88 (416)
T KOG2765|consen 9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA 88 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence 345678999999999999999999999988732 387777665544444444322 11111000
Q ss_pred ---------------------------------------------------CccCH------------HHHHHHHHHHHH
Q 018804 71 ---------------------------------------------------PKLTL------------ALFLEIFVLSLV 87 (350)
Q Consensus 71 ---------------------------------------------------~~~~~------------~~~~~~~~~g~~ 87 (350)
+...+ +.....+....+
T Consensus 89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l 168 (416)
T KOG2765|consen 89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL 168 (416)
T ss_pred hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 00011 223345667777
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG 167 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 167 (350)
..+.++.++.|+.+++++..+++.+++-+|+..++.++..||++.. +.+++.+.+.|+++++.++.. .+
T Consensus 169 -WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~-~~--- 237 (416)
T KOG2765|consen 169 -WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSK-QN--- 237 (416)
T ss_pred -HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccc-cc---
Confidence 6779999999999999999999999999999999999999999999 999999999999999864321 11
Q ss_pred CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH---HHHHHHHHHHHhc-CCccc
Q 018804 168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLG---AAQSAVFTVIVAR-KPADW 243 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~-~~~~~ 243 (350)
++....+...|.++++++++.||+|.++.|+...+.++...+..+...+| .++..|...+.+. ..+.+
T Consensus 238 --------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F 309 (416)
T KOG2765|consen 238 --------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF 309 (416)
T ss_pred --------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc
Confidence 11344556899999999999999999999988877632333333333333 3444444443332 23344
Q ss_pred cccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 244 ~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
+.++......++..+++++.++-++|.+|.-.+++..+++-+.++.+.+++.+.++-+.++|+.+++|.+.|++|.++++
T Consensus 310 ~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 310 ELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred cCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 45555567778888899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccC
Q 018804 324 WGKEG 328 (350)
Q Consensus 324 ~~~~~ 328 (350)
...+.
T Consensus 390 ~~~~~ 394 (416)
T KOG2765|consen 390 ISSEN 394 (416)
T ss_pred ccccc
Confidence 76544
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.81 E-value=4.1e-20 Score=163.11 Aligned_cols=288 Identities=13% Similarity=0.141 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804 16 LLLMVLAQLSYTFLYFITEASFN--HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL 93 (350)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~k~~~~--~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 93 (350)
..+......+........|+.++ ..--|..++..+...+.+.++.....+..+..+..++..+...+..|++ ..++.
T Consensus 19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~ 97 (316)
T KOG1441|consen 19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISH 97 (316)
T ss_pred HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHH
Confidence 33344444455556667788887 3334778888866677666666554443433333455678889999999 89999
Q ss_pred HHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccC
Q 018804 94 NMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHI 173 (350)
Q Consensus 94 ~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 173 (350)
.+-+.|+++.+++.+..+..++|++++++++++.+|+.+.. .+..+.....||.+.+..
T Consensus 98 v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~--------------- 156 (316)
T KOG1441|consen 98 VLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT--------------- 156 (316)
T ss_pred HhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec---------------
Confidence 99999999999999999999999999999999999999999 999999999999999752
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--hcC-chhHHHHHHHHHHHHHHH-HHHHHHhcCCc-cccc-cc
Q 018804 174 QRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLK--RYP-AQLSLTTWMCFLGAAQSA-VFTVIVARKPA-DWRI-GL 247 (350)
Q Consensus 174 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~~~~-~~ 247 (350)
+..-+..|...+..+.+..+..+++.++..+ +.. ++++...++..++.+.++ |.....+.+.. .+.. ..
T Consensus 157 -----e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~ 231 (316)
T KOG1441|consen 157 -----ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPW 231 (316)
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecccc
Confidence 2233379999999999999999999999984 333 899999999999999998 77665544322 0011 11
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
.......++.. ++...-+...+..+.+++|.+.++.+...-++.++.|+++|+++.|+.+..|+++.++|+++|++.|.
T Consensus 232 ~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 232 FVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred chhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 11233333333 34445556677889999999999999999999999999999999999999999999999999998876
Q ss_pred CCcc
Q 018804 328 GDHQ 331 (350)
Q Consensus 328 ~~~~ 331 (350)
++++
T Consensus 311 ~~~~ 314 (316)
T KOG1441|consen 311 KEKK 314 (316)
T ss_pred hhhc
Confidence 6543
No 21
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.8e-15 Score=132.71 Aligned_cols=299 Identities=14% Similarity=0.113 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCC---CCchHHHHHHHHHHHHHHHHHHHhhccc----cCC------ccCHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHG---MNPHVYVTYRHIVAGIAMFPFAYFLERK----IRP------KLTLALFLE 80 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~------~~~~~~~~~ 80 (350)
...+.++...+.++......|+....+ +.|...++.--++-.+++....+...|+ ..+ ...+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 667778888889999999999987764 6677888887777777777766554322 111 123456777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccC
Q 018804 81 IFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKG 160 (350)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 160 (350)
..+.+++ +.+.+.++|.++.+.+++..++..++-.+.|+++..+++++|+++. ||.++.+.++|+.++-.+..
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 8888888 8999999999999999999999999999999999999999999999 99999999999999953212
Q ss_pred CCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHH-HHHHHHHHHHHHHHHHHHhcC
Q 018804 161 PAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLT-TWMCFLGAAQSAVFTVIVARK 239 (350)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~ 239 (350)
+..+ +.++....+...|....+.+++..+...++..|.+|+...+..+. ....++|.++.+...+..+.+
T Consensus 168 ~~~~---------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~ 238 (345)
T KOG2234|consen 168 SPTG---------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGE 238 (345)
T ss_pred CCCC---------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1111 111234566689999999999999999999999998865444444 344555555555555433322
Q ss_pred CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804 240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL 319 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~ 319 (350)
...|... ...|-...+.-++..+.+-.+...-+|+.+-..=+....+..+++.+.++.++|-.||....+|..+++.++
T Consensus 239 ~i~~~gf-f~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si 317 (345)
T KOG2234|consen 239 AINEYGF-FYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSI 317 (345)
T ss_pred ccccCCc-cccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHH
Confidence 1111111 112222233334455666667777888888888888888999999999999999999999999999999999
Q ss_pred eeeeecccCC
Q 018804 320 YLLLWGKEGD 329 (350)
Q Consensus 320 ~l~~~~~~~~ 329 (350)
.++...+.++
T Consensus 318 ~lY~~~P~~~ 327 (345)
T KOG2234|consen 318 FLYSLYPARD 327 (345)
T ss_pred HHhhcCCccc
Confidence 9999554443
No 22
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.3e-16 Score=130.93 Aligned_cols=262 Identities=11% Similarity=0.083 Sum_probs=201.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHH
Q 018804 43 PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVI 122 (350)
Q Consensus 43 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il 122 (350)
...+++++++...++--++..++++. +.+...-+.....++- +.+.....+.|++|.|-....+-.++-|+=++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 45667777777777754443333221 2222223333344444 5666677789999999999999999999999999
Q ss_pred HHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH
Q 018804 123 AVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI 202 (350)
Q Consensus 123 ~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v 202 (350)
+.++.+++.++. +...++++++||.+....++...+ ........|.++.+++-..-++...
T Consensus 129 GVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv~g-------------~e~~t~g~GElLL~lSL~mDGlTg~ 189 (337)
T KOG1580|consen 129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKVGG-------------AEDKTFGFGELLLILSLAMDGLTGS 189 (337)
T ss_pred ehhhhcccccHH------HHHHHHHHHHHHHHhhccccccCC-------------CcccccchHHHHHHHHHHhcccchh
Confidence 999999999999 999999999999999865444333 2334457899999999999999999
Q ss_pred HHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhc--CCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcc
Q 018804 203 MQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVAR--KPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPV 279 (350)
Q Consensus 203 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~ 279 (350)
.+.+....+. ..-.++.+..+++.+.+..-.++.+. ++..+....+..|+-+...++ ++++++++.+.-....+|.
T Consensus 190 ~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPL 268 (337)
T KOG1580|consen 190 IQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPL 268 (337)
T ss_pred HHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCe
Confidence 9888877654 56678888888888777665554432 122223344567888888887 7999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
..+++..++-.++++.|.++++.+++..||+|..+++.++..=....++
T Consensus 269 tCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~ 317 (337)
T KOG1580|consen 269 TCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK 317 (337)
T ss_pred eEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence 9999999999999999999999999999999999999998775544333
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.70 E-value=5.1e-15 Score=128.13 Aligned_cols=231 Identities=16% Similarity=0.177 Sum_probs=172.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804 73 LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV 152 (350)
Q Consensus 73 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv 152 (350)
.++++..+..+.+++ +.+.+.+.+.++++.+++...++.++..+++++++++++|+|+++. ||.++.+.++|+
T Consensus 12 ~~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv 84 (244)
T PF04142_consen 12 KSPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGV 84 (244)
T ss_pred HhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHH
Confidence 466788899999999 9999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchh-HHHHHHHHHHHHHHHH
Q 018804 153 TIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQL-SLTTWMCFLGAAQSAV 231 (350)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 231 (350)
.++-....+. .+...+.+ ...+....+...|.++.+.++++.++..++.+|..|+.+.+. ..+......+.++.++
T Consensus 85 ~lv~~~~~~~--~~~~~~~~-~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~ 161 (244)
T PF04142_consen 85 VLVQLSSSQS--SDNSSSSS-VHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL 161 (244)
T ss_pred heeecCCccc--cccccccc-cccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 9985422211 10000000 000123455689999999999999999999999999875333 3444445566666655
Q ss_pred HHHHHhcC-CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhh
Q 018804 232 FTVIVARK-PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIV 310 (350)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~i 310 (350)
.....+.+ ..+...... +-...+.-++.++++-.+....+|+.+...=+.....+.+.+.+.++.+||.++|....+
T Consensus 162 ~~~~~~~~~~~~~g~f~G--~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l 239 (244)
T PF04142_consen 162 ALLLSDGSAISESGFFHG--YSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL 239 (244)
T ss_pred HHhcccccccccCCchhh--cchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence 54433221 111111111 111222234456667777888999999999999999999999999999999999999999
Q ss_pred hhHHH
Q 018804 311 GAVVV 315 (350)
Q Consensus 311 G~~li 315 (350)
|+.++
T Consensus 240 g~~~V 244 (244)
T PF04142_consen 240 GAALV 244 (244)
T ss_pred heecC
Confidence 98764
No 24
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.1e-15 Score=130.46 Aligned_cols=265 Identities=13% Similarity=0.177 Sum_probs=211.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHH
Q 018804 42 NPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFV 121 (350)
Q Consensus 42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~i 121 (350)
++....+.+.+.+.+.-...+.+++++ ...++.++.....++. +.++..+.+.|++|++-....+-.++--+=+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~t-n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFT-NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHH-hhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 477778888888877765554433222 3344457777888888 778999999999999988888888877777789
Q ss_pred HHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 018804 122 IAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMY 201 (350)
Q Consensus 122 l~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~ 201 (350)
.+.++.|.|.+.. +.....++-+|+.+....+.+. +.++..+.+...|..+....-+.-++.+
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-----------s~~~~g~~ns~~G~~Ll~~~L~fDgfTn 188 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-----------SSSKSGRENSPIGILLLFGYLLFDGFTN 188 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-----------CccccCCCCchHhHHHHHHHHHHHhhHH
Confidence 9999999999999 9999999999999987653321 1112444566899999999999999999
Q ss_pred HHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcC--CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCc
Q 018804 202 IMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARK--PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGP 278 (350)
Q Consensus 202 v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~ 278 (350)
..++++.++++ ++..++++..+++.+......+..+.. .-.+-..++..++-++.... ++++++.+.++.+++.++
T Consensus 189 ~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGs 267 (327)
T KOG1581|consen 189 ATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGS 267 (327)
T ss_pred hHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhccc
Confidence 99999999876 889999999999998888774422221 11222334556666766665 688999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 279 VFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 279 ~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
.+.+.+..++-+++++++.+++|.+++..|++|..+++.|+.+-..-+++
T Consensus 268 lt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 268 LTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887655544
No 25
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.68 E-value=4.5e-16 Score=115.69 Aligned_cols=135 Identities=16% Similarity=0.241 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC-ccCHHHHHHHHHHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-KLTLALFLEIFVLSLVGVTLT 92 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 92 (350)
...+++++++++++..+++.|...+. +||...++.|..+...++..+....++.+.. ..+.|.|..+.+.|+. .+++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence 45789999999999999999999986 9999999999999999998888765543322 3577778888888877 7999
Q ss_pred HHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 93 LNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 93 ~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
+.+||.|++..+++.+..+..++|+++++++++++|||+|.. +++|+++..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999999 9999999999998874
No 26
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.67 E-value=3.6e-17 Score=135.75 Aligned_cols=287 Identities=15% Similarity=0.146 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
.++..+.=+-.++-......+.+..+.|++ |...+|..+..-+++..+++..|+ +. -...|...++.+++ -+=
T Consensus 17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~---~~~~~~hYilla~~-DVE 90 (336)
T KOG2766|consen 17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KY---IKAKWRHYILLAFV-DVE 90 (336)
T ss_pred hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HH---HHHHHHHhhheeEE-eec
Confidence 333333333333333344444444444344 777788888888888888876643 22 22335557777887 566
Q ss_pred HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCc
Q 018804 92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPI 171 (350)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~ 171 (350)
++++...|.||++...+..+-+-..+.+.+++|+++|.|.++. ++.|+++++.|++++...+-..
T Consensus 91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a--------- 155 (336)
T KOG2766|consen 91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA--------- 155 (336)
T ss_pred ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc---------
Confidence 8888899999999999999999999999999999999999999 9999999999999997643211
Q ss_pred cCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhH
Q 018804 172 HIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDL 251 (350)
Q Consensus 172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 251 (350)
++.....+..+|+++.++++-+||+.++....+.|+. |....+....++|++++.+-..+...+.....+. +
T Consensus 156 ---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~----~ 227 (336)
T KOG2766|consen 156 ---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVSTLHWD----S 227 (336)
T ss_pred ---ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh----H
Confidence 1113456668999999999999999999999999999 8888888999999999998844322222222211 2
Q ss_pred HHHHHH-hHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804 252 WSTIYG-GVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH 330 (350)
Q Consensus 252 ~~~l~~-gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~ 330 (350)
-...++ ..++.++-|.+.-..+|..+++..++-..+.-.+++++ ..||-+.+|...+..+.+..|.+++..+++.+.
T Consensus 228 ~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~ 305 (336)
T KOG2766|consen 228 AIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEE 305 (336)
T ss_pred HHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcH
Confidence 222221 23344445555556789999999999999999999998 677778999999999999999999976554433
No 27
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=1e-13 Score=120.13 Aligned_cols=289 Identities=13% Similarity=0.101 Sum_probs=223.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHH--HHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYV--TYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG 88 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~--~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (350)
...+...++.-++.-....+..|+...+ .+ |..+. ++|.+...+.+...-..+ --+.++.+++..++++...++
T Consensus 10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-lv~~~~l~~~~~kk~~P~~~l- 86 (314)
T KOG1444|consen 10 QSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLG-LVNFRPLDLRTAKKWFPVSLL- 86 (314)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhc-eeecCCcChHHHHHHccHHHH-
Confidence 4455666666777777788889988876 33 44444 478888877766653322 122457889999999999999
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH 168 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~ 168 (350)
+.+....--.+++|.++...+++.+.+|+++++....++|.|++.+ .+.++...+.|.......
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~---------- 150 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT---------- 150 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc----------
Confidence 7888888889999999999999999999999999999999999988 999999999998877542
Q ss_pred CCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhc-C---Cccc
Q 018804 169 PPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVAR-K---PADW 243 (350)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~ 243 (350)
+..-...|..+++...++.+.+.+..|+..+..+ +.....++..+.+.........+.++ + .+..
T Consensus 151 ----------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~ 220 (314)
T KOG1444|consen 151 ----------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFD 220 (314)
T ss_pred ----------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcc
Confidence 1222245899999999999999999998876654 66788899999998888888877664 1 1111
Q ss_pred cccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 244 ~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
.+.....+..+...++.+.++.| +-.++.+..++...++.+..+...+.+...+..|++.++...+|..+-++|-++++
T Consensus 221 ~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 221 NWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred cccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 12233456667777776666666 55689999999999999977777788878788888999999999999999999998
Q ss_pred ecccCCc
Q 018804 324 WGKEGDH 330 (350)
Q Consensus 324 ~~~~~~~ 330 (350)
..+.+++
T Consensus 300 ~~~~~~k 306 (314)
T KOG1444|consen 300 YATFRKK 306 (314)
T ss_pred hhhhhhc
Confidence 7764433
No 28
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.64 E-value=6.4e-14 Score=119.70 Aligned_cols=254 Identities=13% Similarity=0.151 Sum_probs=194.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcccc---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHH
Q 018804 43 PHVYVTYRHIVAGIAMFPFAYFLERKI---RPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVT 119 (350)
Q Consensus 43 p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~ 119 (350)
|..++.++.++-.++-.......+++. +-..+|++..+-+....++.++...+-+++++|++.+..++..+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 777888887777766555544444322 23567777776555555558889999999999999999999999999999
Q ss_pred HHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHH
Q 018804 120 FVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSA 199 (350)
Q Consensus 120 ~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 199 (350)
.+++.++.-|++++. -..-+.++.+|+.+++.. + .+-...|.++...++++-++
T Consensus 125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~K-s-------------------Tqf~i~Gf~lv~~aS~~sGl 178 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTYK-S-------------------TQFNIEGFFLVLAASLLSGL 178 (349)
T ss_pred HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEec-c-------------------cceeehhHHHHHHHHHhhhh
Confidence 999999999999998 788888888888888763 2 12236899999999999999
Q ss_pred HHHHHHHHhhhcC----chhHHHHHHHHHHHHHHHHHHHHHhcCCc-----cccccchh-hHHHHHHHhHhHHHHHHH--
Q 018804 200 MYIMQAITLKRYP----AQLSLTTWMCFLGAAQSAVFTVIVARKPA-----DWRIGLNI-DLWSTIYGGVVVSGLIVF-- 267 (350)
Q Consensus 200 ~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~l~~gi~~~~~~~~-- 267 (350)
-..+.+..+++.+ +|............+.++|..+.++.... .+...++. .+..+...+ +++..++.
T Consensus 179 RW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l~ 257 (349)
T KOG1443|consen 179 RWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLLE 257 (349)
T ss_pred hHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHHH
Confidence 8888888887764 78888888888888999999888875221 12222221 222222222 23334443
Q ss_pred -HHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 268 -IQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 268 -~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
..+.-+.+++....++.+...-+-..+++.++.+|.++...|.|..+...|+..+.
T Consensus 258 ~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 258 FSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 33456888999999999999999999999999999999999999999999999984
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.63 E-value=8.7e-15 Score=108.86 Aligned_cols=136 Identities=16% Similarity=0.127 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI 265 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~ 265 (350)
..++++++++++++..++.|.-.|+. ||...+..+.+...+.+......... .......+++.|.++...|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 46889999999999999999999988 99999999999888887777665442 11222236678989988885 79999
Q ss_pred HHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804 266 VFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~ 324 (350)
..+|++|+|..+++++..+.-++|+++++++++++||++|..+++|+.++.+|.+++..
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999998864
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.59 E-value=8.2e-15 Score=114.36 Aligned_cols=125 Identities=21% Similarity=0.423 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 018804 24 LSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYT 103 (350)
Q Consensus 24 ~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 103 (350)
++||...++.|...++ .||...+++|+..+.+ ++++....+++.....+++++......|.++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4689999999999998 9999999999999998 6666655555444567788888899999997899999999999999
Q ss_pred CcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 104 SPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 104 ~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
+++.++++.+++|+++.+++++++||++++. +++|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999874
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=4.1e-15 Score=124.85 Aligned_cols=266 Identities=14% Similarity=0.076 Sum_probs=206.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhcccc----C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchh
Q 018804 42 NPHVYVTYRHIVAGIAMFPFAYFLERKI----R--PKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTV 115 (350)
Q Consensus 42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~ 115 (350)
.|..+++++++....+...+.....+-. . .+.+.+..+......++ +.+...+-+++++|.+++...+-.++.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchh
Confidence 4888999999999999888775543321 1 23556666777777777 777888888999999999999999999
Q ss_pred hHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHH
Q 018804 116 AAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSI 195 (350)
Q Consensus 116 pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (350)
.+|+++++++++|++-+.. -..++.++++|-.+=..++| ..+.-...|.++++.|++
T Consensus 139 tvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~-----------------~~~~ls~~GvifGVlaSl 195 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEG-----------------STGTLSWIGVIFGVLASL 195 (347)
T ss_pred hhHHHHhHHhhcccccccc------cceeehhheehheecccccc-----------------ccCccchhhhHHHHHHHH
Confidence 9999999999999999998 88888888888655432211 122334689999999999
Q ss_pred HHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCcccc---ccchhhHHHHHHHhHhHHHHHHHHHHH
Q 018804 196 TWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWR---IGLNIDLWSTIYGGVVVSGLIVFIQLW 271 (350)
Q Consensus 196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~gi~~~~~~~~~~~~ 271 (350)
+-|+..+..|+...... .-...+.+..+.+.++.+|...+.++-..-+. .+....|..+...|+++..++| .-.+
T Consensus 196 ~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy-vTg~ 274 (347)
T KOG1442|consen 196 AVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY-VTGW 274 (347)
T ss_pred HHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh-eeeE
Confidence 99999999997766544 45667889999999999999887654211111 2233356666666665555554 3446
Q ss_pred hhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCcch
Q 018804 272 CTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQE 332 (350)
Q Consensus 272 a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~~~ 332 (350)
-+|.++|.+-.+-....-....+++..+++|..+...|-|-.++++|..++.+.|++++++
T Consensus 275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~ 335 (347)
T KOG1442|consen 275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK 335 (347)
T ss_pred EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999999999999999887665543
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.48 E-value=1.4e-13 Score=107.25 Aligned_cols=125 Identities=19% Similarity=0.415 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhc
Q 018804 195 ITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTD 274 (350)
Q Consensus 195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~ 274 (350)
++||.+.+..|+..++. |+.....+++..+.+ .++...+..... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 46899999999999998 999999999999988 666666554432 22334556777888888888999999999999
Q ss_pred cCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 275 KRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 275 ~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
+.+++.++.+.+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987653
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.42 E-value=1.5e-10 Score=99.97 Aligned_cols=253 Identities=14% Similarity=0.141 Sum_probs=175.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhccccCCccC--HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhc-hhh
Q 018804 40 GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLT--LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVN-TVA 116 (350)
Q Consensus 40 g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p 116 (350)
|-+|.+-.+.-.+-+.++ ........+ +..+ .+.+...++.|++ ..+++..++.|.++.+++.+.++.. ++-
T Consensus 9 gG~~~~Q~lG~t~Gali~-alv~~~~~~---p~~~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QL 83 (269)
T PF06800_consen 9 GGKPANQILGTTIGALIF-ALVVFLFRQ---PAFSMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQL 83 (269)
T ss_pred CCcHHHHHHHHHHHHHHH-HHHHHHHhC---CCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence 445655555433333333 333333333 2333 4778888999999 8889999999999999999998885 788
Q ss_pred HHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHH
Q 018804 117 AVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSIT 196 (350)
Q Consensus 117 i~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 196 (350)
+.+.+++.++++|--+..++ .....++++.++|+.+.+..+.+.... +...+...|....+++.+.
T Consensus 84 vg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~~------------~~~~~~~kgi~~Ll~stig 149 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDKS------------SSKSNMKKGILALLISTIG 149 (269)
T ss_pred HHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcccccccccc------------ccccchhhHHHHHHHHHHH
Confidence 88999999999997766511 112457888899998887643221100 1234557899999999999
Q ss_pred HHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccC
Q 018804 197 WSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKR 276 (350)
Q Consensus 197 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~ 276 (350)
|..|.+.-|.. +. ++.....-+.+...+....+..+.... . .....|.. +..|+ .-.++..++..+.++.
T Consensus 150 y~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~---~~k~~~~n-il~G~-~w~ignl~~~is~~~~ 219 (269)
T PF06800_consen 150 YWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--F---FEKKSWKN-ILTGL-IWGIGNLFYLISAQKN 219 (269)
T ss_pred HHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--c---cccchHHh-hHHHH-HHHHHHHHHHHhHHhc
Confidence 99999996642 23 666665555544444444444432111 1 11222333 33455 3678888999999999
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhccccchhh----hhhhHHHhhhhee
Q 018804 277 GPVFATMFNPVSTILVAILAYFVFGEKLFLGS----IVGAVVVIGGLYL 321 (350)
Q Consensus 277 ~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~----~iG~~li~~g~~l 321 (350)
+....=.+.-+.++++.+.+.+++||+=+..+ ++|+++++.|.++
T Consensus 220 G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 220 GVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999988654 5688888887654
No 34
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.40 E-value=2.1e-12 Score=108.85 Aligned_cols=266 Identities=12% Similarity=0.094 Sum_probs=184.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CcchhhhhhchhhHHHHHH
Q 018804 44 HVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYT-SPTFVASVVNTVAAVTFVI 122 (350)
Q Consensus 44 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~~i~~~~pi~~~il 122 (350)
-.+++.++++-..--+++---. ...+++.+.|++...... +...+.+-++++++- +...-.++.+-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 5667777766555544432100 111245556655554433 233455556888854 7788889999999999999
Q ss_pred HHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH
Q 018804 123 AVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI 202 (350)
Q Consensus 123 ~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v 202 (350)
+++++|+|.+.+ |+.++++.-+|+++.+..+...... -.++-+..+...+...+..|+.+...+.+..|.-.+
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~-~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgi 181 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS-KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGI 181 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh-hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999998653322211 111111222224556778999999999999999999
Q ss_pred HHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCC-cc--------------ccccchhhHHHHHHHhHhHHHHHH
Q 018804 203 MQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKP-AD--------------WRIGLNIDLWSTIYGGVVVSGLIV 266 (350)
Q Consensus 203 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~l~~gi~~~~~~~ 266 (350)
+++...|+++ ++-...+|. -.+.+|..++..++. .+ .....+..|+.++... +.+..+.
T Consensus 182 yqE~~Y~kyGKh~~EalFyt----H~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~-L~Qy~Ci 256 (330)
T KOG1583|consen 182 YQETTYQKYGKHWKEALFYT----HFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV-LTQYFCI 256 (330)
T ss_pred HHHHHHHHhcCChHHHHHHH----HHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHH-HHHHHHH
Confidence 9998888876 667766665 445556665544321 01 1111234565555433 3455555
Q ss_pred HHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 267 FIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
--.+....+.++.++++...++-.++.++|.+.|+.+++++.|+|..++..|..++....
T Consensus 257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 555566778888999999999999999999999999999999999999999988887443
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.37 E-value=1.9e-11 Score=107.87 Aligned_cols=133 Identities=19% Similarity=0.354 Sum_probs=115.0
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc--hHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNP--HVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG 88 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (350)
...+|..+.++++++|+...+..|...++ .++ .....+++.++.+++.++.+..++. +..+.+++...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 34689999999999999999999998875 664 4555578999999988887654332 233667777888899998
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV 152 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv 152 (350)
..+++.++++++++.+++.++.+.++.|+++.++++++++|++++. ++.|..+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999 999999999986
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.35 E-value=1.4e-11 Score=100.78 Aligned_cols=275 Identities=12% Similarity=0.147 Sum_probs=194.3
Q ss_pred HHHHHHHHhhhC-CCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 018804 28 FLYFITEASFNH-GMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSP 105 (350)
Q Consensus 28 ~~~~~~k~~~~~-g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 105 (350)
++.+..|+..+. |++ -+.+.+.+.+...+-+..+-..+.. ..+.++...++..+++ .....+.--.+++|.+.
T Consensus 20 lmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~----~fR~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~v 94 (309)
T COG5070 20 LMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV----EFRLTKAKKWFPISFL-LVVMIYTSSKSLQYLAV 94 (309)
T ss_pred HHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh----heehhhhhhhcCHHHH-HHHHHHhcccceeeeee
Confidence 455566766553 333 2455566666555554444322211 2223334444555555 44455555679999999
Q ss_pred chhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhh
Q 018804 106 TFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLK 185 (350)
Q Consensus 106 ~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (350)
...+++.+++.+.++.....++|.|.+-. +..+.++.++.-+...+.+.+... -..+..+.
T Consensus 95 piYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~~-------------~~~~~lN~ 155 (309)
T COG5070 95 PIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQASA-------------FKAQILNP 155 (309)
T ss_pred eHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHHH-------------HHhcccCC
Confidence 99999999999999999999999999999 999999988888877654221110 12234468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcC-Cccc-cccchhhHHHHHHHhHhHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARK-PADW-RIGLNIDLWSTIYGGVVVS 262 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~gi~~~ 262 (350)
|.+++....+..+.+....|+..+-.. .....++|..+.+..+++.+...+++. +... +..+.....++...|+. +
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-s 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-S 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-H
Confidence 999999999999999998887755432 556778899999999999999888752 2211 11122234556666664 4
Q ss_pred HHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 263 GLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
..--++-.|+++.++.+..++++.++-.-..+.|.++|||+.+...+..+.+-..+..++...+.
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks 299 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS 299 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334667899999999999999999999999999999999999999998887777666665543
No 37
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.34 E-value=2.4e-11 Score=102.79 Aligned_cols=277 Identities=14% Similarity=0.149 Sum_probs=191.4
Q ss_pred HHHHHHHHHhhh---CCCC----chHHHHHHHHHHHHHHHHHHHhhccccCC---------------ccCHHHHHHHHHH
Q 018804 27 TFLYFITEASFN---HGMN----PHVYVTYRHIVAGIAMFPFAYFLERKIRP---------------KLTLALFLEIFVL 84 (350)
Q Consensus 27 ~~~~~~~k~~~~---~g~~----p~~~~~~r~~~~~l~l~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 84 (350)
+.+.+..|++-+ +|.+ |+..+..-++--++.++.+.+++.+...+ +.++ ...+.-
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl~P 92 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP---VLFLPP 92 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc---ceecCh
Confidence 446667777643 2333 55555555555455556665555442221 1222 223335
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR 164 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~ 164 (350)
.++ -..+..+.|.++.+++++.-+++.....+|+.+++.-+++.+++.. ||.|+.....|++.+...+ ...
T Consensus 93 al~-Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d--~~~ 163 (372)
T KOG3912|consen 93 ALC-DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD--VHL 163 (372)
T ss_pred HHH-HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee--ccc
Confidence 555 6778889999999999999999999999999999999999999999 9999999999999885431 111
Q ss_pred CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCc--
Q 018804 165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPA-- 241 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 241 (350)
..++ -.+..+...|+++.+.+-+.-|+.+++.+|..++.. +|.....|.-++|..+...+...+...+.
T Consensus 164 ~~~p--------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~ 235 (372)
T KOG3912|consen 164 VTDP--------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD 235 (372)
T ss_pred ccCC--------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence 1000 023355689999999999999999999999988876 89999999988885544444443321000
Q ss_pred cccccc---hhhHH---------HHHHHhHhHHHHHHHHHHHh----hccCCcchhhhhhhHHHHHHHHHHHHHhccccc
Q 018804 242 DWRIGL---NIDLW---------STIYGGVVVSGLIVFIQLWC----TDKRGPVFATMFNPVSTILVAILAYFVFGEKLF 305 (350)
Q Consensus 242 ~~~~~~---~~~~~---------~~l~~gi~~~~~~~~~~~~a----~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t 305 (350)
.+...+ ..+|. ..+++...+...+..+++.+ .|..++++-.++-.++..+--+++.....|.+.
T Consensus 236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ 315 (372)
T KOG3912|consen 236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH 315 (372)
T ss_pred cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence 000000 00110 11222223334444445433 778888888899999999999999999999999
Q ss_pred hhhhhhhHHHhhhheeee
Q 018804 306 LGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 306 ~~~~iG~~li~~g~~l~~ 323 (350)
..|+.|..+.+.|++++.
T Consensus 316 llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 316 LLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999987
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.34 E-value=6.1e-12 Score=100.93 Aligned_cols=218 Identities=10% Similarity=0.051 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCC
Q 018804 83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPA 162 (350)
Q Consensus 83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~ 162 (350)
...++ ....++.|..+++..+++.++.+..+...|+.+++++++|+|+... ++.+.++++.|++++...+
T Consensus 58 PF~i~-Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D--- 127 (290)
T KOG4314|consen 58 PFSIF-WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD--- 127 (290)
T ss_pred ceEEE-EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc---
Confidence 33444 4568899999999999999999999999999999999999999999 9999999999999997532
Q ss_pred CCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC--c-hhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018804 163 ARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP--A-QLSLTTWMCFLGAAQSAVFTVIVARK 239 (350)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~-~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (350)
+.......|+.+++.+++..++|-+..|....+.. + ...+....++--.+...|.....-..
T Consensus 128 ---------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~ 192 (290)
T KOG4314|consen 128 ---------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG 192 (290)
T ss_pred ---------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence 23345589999999999999999999998877653 2 11112222222223333333322234
Q ss_pred CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804 240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL 319 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~ 319 (350)
.++|.......|..+...+.+..++. ++.+.++..+.|...++-.....+-....+.++-+-..+.....|..+++.|.
T Consensus 193 VE~~qsFA~~PWG~l~G~A~L~lAFN-~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 193 VEHLQSFAAAPWGCLCGAAGLSLAFN-FLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred hHHHHHHhhCCchhhhhHHHHHHHHh-hheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45666555667888887777644444 46788999999999999999999999999976666667888999999999998
Q ss_pred eeeeecc
Q 018804 320 YLLLWGK 326 (350)
Q Consensus 320 ~l~~~~~ 326 (350)
.+....+
T Consensus 272 iLiiiP~ 278 (290)
T KOG4314|consen 272 ILIIIPE 278 (290)
T ss_pred Hheeccc
Confidence 8776544
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.31 E-value=1.3e-11 Score=94.31 Aligned_cols=104 Identities=19% Similarity=0.304 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccc--CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHH
Q 018804 48 TYRHIVAGIAMFPFAYFLERKI--RPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVV 125 (350)
Q Consensus 48 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~ 125 (350)
.+|+..+.+++..+...+++.+ .+..+++.+......|.++...++.++++|+++.+ +.++++.+++|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5789999999888877654422 12334455667778888877789999999999999 58899999999999999999
Q ss_pred HhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804 126 LRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY 158 (350)
Q Consensus 126 ~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 158 (350)
++|||++++ ++.+++++++|++++...
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence 999999999 999999999999999864
No 40
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.26 E-value=2.2e-10 Score=92.70 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-----C-chhHHHHHHHHHHHHHHHHHHHHHhcCCcccc---cc------chhh
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRY-----P-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWR---IG------LNID 250 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~------~~~~ 250 (350)
|.++++.+.++.+++.+..|+..++. . ++.....+....+.+..++..++.+....... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988772 3 89999999999999999999888775321110 00 2234
Q ss_pred HHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804 251 LWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 251 ~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~ 324 (350)
+..++..|++ ...-+...+..+++++|...++....+.+..++.+++++||++|..+++|+.+.++|.+++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555555554 556666788999999999999999999999999999999999999999999999999998864
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.24 E-value=6.3e-10 Score=99.94 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=114.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
...|.++.++++++|+...+..|...++ .++.... +...++.+++.++...... ....+...+...+..|+++.++
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999998766 7887764 4556666777776654322 1234555566667899999999
Q ss_pred HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804 92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY 158 (350)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 158 (350)
++.+|++++++.+++.++++.+++|+++.++++++++|+++.. +++|.++.+.|+......
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 999999999999998754
No 42
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.23 E-value=2.6e-10 Score=101.74 Aligned_cols=277 Identities=14% Similarity=0.171 Sum_probs=158.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC-ccCHHH-HHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-KLTLAL-FLEIFVLSLVG 88 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~ 88 (350)
+...|...+++++++.+....+.|....+ .+. +..+. ...++. ....++.|.+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence 35679999999999999999999987665 111 00000 001111 12344555555
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH 168 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~ 168 (350)
.+++..+.+.|+.+.|.+.++++..+.-++.++++.+++|||++.. ++.|+.++++|..++... ++.....
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~-- 130 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPI-- 130 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCc--
Confidence 6777888889999999999999999999999999999999999999 999999999999988653 3221110
Q ss_pred CCccCcccchhhhhhhhHHH-H-HHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHH---HHHHHhcCC-cc
Q 018804 169 PPIHIQRNNIIQEQWLKGSF-L-TIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAV---FTVIVARKP-AD 242 (350)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~-~-~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~-~~ 242 (350)
.+.++-...-...+.+ + .+.......+.....+|..++ +...........++...+. ......... .+
T Consensus 131 ----~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~ 204 (300)
T PF05653_consen 131 ----HTLDELIALLSQPGFLVYFILVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD 204 (300)
T ss_pred ----CCHHHHHHHhcCcceehhHHHHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc
Confidence 0000000111111111 1 111111222222222222221 2221111112222211111 111111100 01
Q ss_pred ccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--ch----hhhhhhHHH
Q 018804 243 WRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKL--FL----GSIVGAVVV 315 (350)
Q Consensus 243 ~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~--t~----~~~iG~~li 315 (350)
.....+..|..++.+ +.+........++|+++.+++.+..+.+ .-...+++-|.++++|.. +. ....|+.++
T Consensus 205 ~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i 283 (300)
T PF05653_consen 205 NQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII 283 (300)
T ss_pred hhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence 112223344444333 3455666677889999999987775554 556667777888888754 44 335688889
Q ss_pred hhhheeeeeccc
Q 018804 316 IGGLYLLLWGKE 327 (350)
Q Consensus 316 ~~g~~l~~~~~~ 327 (350)
+.|++++...|+
T Consensus 284 i~GV~lL~~~~~ 295 (300)
T PF05653_consen 284 IIGVFLLSSSKD 295 (300)
T ss_pred HHhhheeeccCc
Confidence 999999975543
No 43
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.22 E-value=8.1e-10 Score=93.20 Aligned_cols=226 Identities=12% Similarity=0.137 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 78 FLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
|+....++.+ ...+..+-.-++.|++-..-.++.++--+=+.+-+.++-+.|.... +.++..+..+|.++.+.
T Consensus 106 ~rtY~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 106 WRTYVILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTL 178 (367)
T ss_pred hhHhhhhHhh-hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhh
Confidence 4555555555 4557777778899998777778888766666688999999999999 99999999999999987
Q ss_pred ccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHH
Q 018804 158 YKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIV 236 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 236 (350)
.|+. ..+.-...|..+.-.|-++-|.-.-.+.+..+..+ +...+.++...+|.+..+......
T Consensus 179 ADs~----------------~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT 242 (367)
T KOG1582|consen 179 ADSQ----------------TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT 242 (367)
T ss_pred cccc----------------cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence 6442 12233368999999999999998888898888876 667777888888888877776655
Q ss_pred hcCCcccccc---chhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhH
Q 018804 237 ARKPADWRIG---LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAV 313 (350)
Q Consensus 237 ~~~~~~~~~~---~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~ 313 (350)
..-...|+.- +.+..+..++.+. .+.+++.....-++..++..++.+...+-.+++++|+++|..++|....-|..
T Consensus 243 ge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gl 321 (367)
T KOG1582|consen 243 GELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGL 321 (367)
T ss_pred ccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhH
Confidence 5444444432 2223445555454 46778888888899999999999999999999999999999999999999999
Q ss_pred HHhhhheeeeeccc
Q 018804 314 VVIGGLYLLLWGKE 327 (350)
Q Consensus 314 li~~g~~l~~~~~~ 327 (350)
+++.|+++-.+.++
T Consensus 322 lv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 322 LVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHhhcccCC
Confidence 99999999887763
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.22 E-value=5.2e-10 Score=100.48 Aligned_cols=138 Identities=19% Similarity=0.194 Sum_probs=116.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
...|.++.++++++|+......|...+. ++.....++..++.+.+.++............+.+.+......++++.++
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999999999999986533 45667788888888888777654332211223567788888899998999
Q ss_pred HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
++.+|++++++.+++.++++..+.|++++++++++++|+++.. +++|.++.+.|+.+...
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 99999999999999864
No 45
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.18 E-value=2.4e-08 Score=89.86 Aligned_cols=301 Identities=15% Similarity=0.085 Sum_probs=181.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHH--Hhhcc---ccCCccCHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFA--YFLER---KIRPKLTLALFLEIFVLSL 86 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~--~~~~~---~~~~~~~~~~~~~~~~~g~ 86 (350)
-..|++..++++++||..++-.|.. +. . +++..+.-..+-.-++.|+. .+..+ ......+.+.+...++.|+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w-~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-KK-W-SWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-CC-C-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 4579999999999999999999983 33 2 33332221111111112211 01001 1112356777888889999
Q ss_pred HHHHHHHHHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccc-cccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804 87 VGVTLTLNMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLR-NARGMAKVLGTLVSLAGVTIMTVYKGPAAR 164 (350)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~-~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~ 164 (350)
+ ..+++..++.++++.+.+.+..+.. ++-+...++..++++|=.+.. .+-.....+|+++.++|+++..........
T Consensus 82 ~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~ 160 (345)
T PRK13499 82 L-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER 160 (345)
T ss_pred H-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 9 8999999999999999999986655 888999999999988643111 111223688999999999999762111100
Q ss_pred CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH-------HHHHHhhhcCchhHHHHHHHH---HHHHHHH-HHH
Q 018804 165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI-------MQAITLKRYPAQLSLTTWMCF---LGAAQSA-VFT 233 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v-------~~~~~~~~~~~~~~~~~~~~~---~~~i~~~-~~~ 233 (350)
. .+.++....+..+|..+++++++.++.|+. ..+...+...++.....-+.. .+.++.- ...
T Consensus 161 ~-------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~ 233 (345)
T PRK13499 161 K-------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFC 233 (345)
T ss_pred c-------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000002235668999999999999999994 322211111144444333333 3333222 222
Q ss_pred HH---HhcCCcccccc--c----hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhh----hhhhHHHHHHHHHHHHHh
Q 018804 234 VI---VARKPADWRIG--L----NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFAT----MFNPVSTILVAILAYFVF 300 (350)
Q Consensus 234 ~~---~~~~~~~~~~~--~----~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~pv~~~l~~~~~~ 300 (350)
.+ .+++....... + .+........|+ .=.+++.+|..+-++.+..... +.+.+..+++.+.+. ++
T Consensus 234 ~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~l 311 (345)
T PRK13499 234 FIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VL 311 (345)
T ss_pred HHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hh
Confidence 21 11111111111 1 122222344444 3667778888888877654333 444888899999998 59
Q ss_pred ccccc------hhhhhhhHHHhhhheeeeec
Q 018804 301 GEKLF------LGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 301 ~e~~t------~~~~iG~~li~~g~~l~~~~ 325 (350)
+|.=+ ...++|++++++|.++....
T Consensus 312 kE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 312 KEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 99866 45678999999998776544
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.18 E-value=1.4e-09 Score=99.65 Aligned_cols=138 Identities=9% Similarity=0.160 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch-HHHHHHHHHHHHHHHHHHHhhccccC----CccCHHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPH-VYVTYRHIVAGIAMFPFAYFLERKIR----PKLTLALFLEIFVLSLV 87 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~-~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 87 (350)
..|.++++.++++|+.+.++.|..... .++. ..+++....+.+.+.+......+... ...+.. ....+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 458899999999999999999987765 6554 55667777666666555544322111 112222 2224444554
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhcc
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYK 159 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 159 (350)
..+.+.+|++++++.+++.++++.++.|++++++++++++|++++. +++|.++++.|+.++...+
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK 330 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence 5678899999999999999999999999999999999999999999 9999999999999987543
No 47
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.18 E-value=4.6e-10 Score=100.99 Aligned_cols=138 Identities=14% Similarity=0.176 Sum_probs=109.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc--ccchhhHHHHHHHhH
Q 018804 182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWR--IGLNIDLWSTIYGGV 259 (350)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~gi 259 (350)
+..+|.++++++++.|+...+..|.. .+. +|....+++..++.++.++......+ ..... ..+...+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence 34689999999999999999999765 556 89999999999998877766543321 11110 00122232 233555
Q ss_pred hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
++.+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|++++.
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999999999999999999999999988765
No 48
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.10 E-value=1.3e-09 Score=96.11 Aligned_cols=136 Identities=10% Similarity=0.188 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCC---ccccccchhh-HHHHHHHhHh
Q 018804 185 KGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKP---ADWRIGLNID-LWSTIYGGVV 260 (350)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~l~~gi~ 260 (350)
+|..+.++++++|+...+..|. ..+. +|....+++++.+.+...+......+.. ..++...... +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999997 4456 9999999999999877766554432110 1111111222 3344555554
Q ss_pred HHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 261 VSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
....+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999987664
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.09 E-value=2e-09 Score=96.18 Aligned_cols=133 Identities=15% Similarity=0.162 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHH
Q 018804 187 SFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIV 266 (350)
Q Consensus 187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~ 266 (350)
.++.+.++++++...+..|+..++. ++ ...+....+.+...|+...... ...|+..+. .++..+..+.++....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 4678999999999999999887764 43 2355555566666666553211 123332222 33434444555678888
Q ss_pred HHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804 267 FIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~ 324 (350)
.++++++++.+++.++.+.+++|+++.+++++++||+++..+++|+.++++|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999887764
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.08 E-value=4.4e-09 Score=94.58 Aligned_cols=134 Identities=10% Similarity=0.105 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
...|.+++++++++|+...+..|...++ .++....+ ..+.+.+.+....... .....+...+...+..|+ +.++
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~-~t~~ 227 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQ-PAMVFSLPAIIKLLLAAA-AMGF 227 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcC-ccccCCHHHHHHHHHHHH-HHHH
Confidence 3468999999999999999999997665 77765432 2233333332222221 112345666777777775 4788
Q ss_pred HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
++.+|++++++.+++.++.+.++.|++..++++++++|+++.. +++|.++++.|+.+...
T Consensus 228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999 99999999999988864
No 51
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.05 E-value=3.8e-09 Score=90.96 Aligned_cols=209 Identities=9% Similarity=-0.050 Sum_probs=128.8
Q ss_pred CcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCC--------CCCCCCccCcc
Q 018804 104 SPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--------NPGHPPIHIQR 175 (350)
Q Consensus 104 ~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~--------~~~~~~~~~~~ 175 (350)
+........+..++++++..+...+||.+.. ++++.++...|++.....+.+... .....+.. ++
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~-~~ 75 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS-SA 75 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC-Cc
Confidence 3445566777888888888888888888888 888888888888754332111100 00000000 00
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHH-HHHHHHHHHHHHHHHhcCC-cccccc-chhhHH
Q 018804 176 NNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWM-CFLGAAQSAVFTVIVARKP-ADWRIG-LNIDLW 252 (350)
Q Consensus 176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~-~~~~~~-~~~~~~ 252 (350)
.+....+...|....+.+..+-+...+++++..|+.+......... ...+.+.........+.+. ..+... ....+.
T Consensus 76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (222)
T TIGR00803 76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV 155 (222)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH
Confidence 0011124467888888888888888898888776652211111111 1222221111111111110 011100 001111
Q ss_pred HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804 253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL 322 (350)
Q Consensus 253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~ 322 (350)
+. -++..+++..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus 156 ~~---~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 156 WI---VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HH---HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 11 12346677778999999999999999999999999999999999999999999999999998764
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.01 E-value=1.6e-08 Score=91.11 Aligned_cols=138 Identities=18% Similarity=0.232 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc---hHHHHHHHHHHHHHHHHHHHhhcccc-----CCccCHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNP---HVYVTYRHIVAGIAMFPFAYFLERKI-----RPKLTLALFLEIFVL 84 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p---~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 84 (350)
..|.+++++++++|+...+..|...++ .++ ....++....+.+.+.......+... ....+...+...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999987554 332 33344444444443333322222211 123466778889999
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
|+++.++++.+|+.++++.+++.++.+..++|++..++++++++|+++.. +++|.++++.|+.+...
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999 99999999999998764
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.92 E-value=3.2e-08 Score=76.72 Aligned_cols=123 Identities=20% Similarity=0.175 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHH
Q 018804 185 KGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGL 264 (350)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~ 264 (350)
.|.++.+.+.++-+...++.|+-.++.++ ...... . + ...... .+ -...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~-----------~~---p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF-----------GL---ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH-----------hc---cHHHHHHHHHHHHH
Confidence 47788899999999999999988877632 221111 0 0 000000 01 11245667888999
Q ss_pred HHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHH--HhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 265 IVFIQLWCTDKRGPVFATMFNPVSTILVAILAYF--VFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 265 ~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~--~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
++.+|.+++++.+.+.+..+....++...+.++. ++||++|+.+++|++++++|+++..++++|
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888875 899999999999999999999998765443
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.92 E-value=1.6e-08 Score=91.35 Aligned_cols=139 Identities=14% Similarity=0.193 Sum_probs=108.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHhhccccCCcc---------CH-HHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFN--HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL---------TL-ALFL 79 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~--~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~ 79 (350)
...|.++++++++.|+...+..|...+ + .+|....++....+.+.+.|+....+....... .. ..+.
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT 221 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence 356999999999999999999998776 4 899999999999999999998765432110000 00 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 80 EIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
..+..+..+....+.+++.+++++++..+++...+.|+++.++++++++|+++.. +++|.++++.|+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 1223333234444567778999999999999999999999999999999999999 99999999999999864
No 55
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.89 E-value=4.2e-10 Score=93.71 Aligned_cols=278 Identities=14% Similarity=0.189 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL 93 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 93 (350)
..++.+++-++.||..+.+.... |-.|.+-+... .++++++....++... |..+.+.+...++.|++ ..+++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGt-T~GALifaiiv~~~~~---p~~T~~~~iv~~isG~~-Ws~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGT-TLGALIFAIIVFLFVS---PELTLTIFIVGFISGAF-WSFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhc-cHHHHHHHHHHheeec---CccchhhHHHHHHhhhH-hhhhh
Confidence 35678889999999998886654 67787776654 4444444444444323 46677888888899999 88899
Q ss_pred HHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 018804 94 NMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIH 172 (350)
Q Consensus 94 ~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 172 (350)
..++.|+++.+++.+.++.. ++-+-+.+++.++++|=.+..+. ....+++++.++|+.+-...+ +.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~-~~---------- 140 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQD-RN---------- 140 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeec-cc----------
Confidence 99999999999999998877 88888999999999997666500 001345666666766665421 11
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHH
Q 018804 173 IQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLW 252 (350)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (350)
+.+++..++...|....+.+.+.|..|.+..+... . |..+...-+.....+..+.+..... +....+..+
T Consensus 141 -nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~~~------~~~~~K~t~ 210 (288)
T COG4975 141 -NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFFKM------EKRFNKYTW 210 (288)
T ss_pred -cccccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhccc------ccchHHHHH
Confidence 11114455667899999999999999999855443 2 3334333333333333333333211 111233334
Q ss_pred HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhh----hhhhHHHhhhheeee
Q 018804 253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGS----IVGAVVVIGGLYLLL 323 (350)
Q Consensus 253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~----~iG~~li~~g~~l~~ 323 (350)
.-...|.. -+++..++..+.++.+..+.=.+.-+..+.+++-+.++++|+=|..+ ++|++++++|..+..
T Consensus 211 ~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 211 LNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 44445653 67788888999999998888888889999999999999999998766 468888888866554
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.85 E-value=1.6e-08 Score=77.19 Aligned_cols=108 Identities=15% Similarity=0.250 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHH
Q 018804 220 WMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFV 299 (350)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~ 299 (350)
++...+.+.............+.+.....+.+...+..|.++...++.++.++.++.+ ..++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555554322111222222345666666677666689999999999999 588899999999999999999
Q ss_pred hccccchhhhhhhHHHhhhheeeeecccC
Q 018804 300 FGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 300 ~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
++|+++..+++|++++++|++++.+.+.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999998876543
No 57
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.77 E-value=1.8e-07 Score=83.76 Aligned_cols=129 Identities=15% Similarity=0.181 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHH----HHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHI----VAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG 88 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (350)
.+|+++.+++.+.++.+....|.. +.+|...++.+.. .+.+++.++ + +.++ .+.+..+..+..|++
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~- 220 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLM- 220 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHH-
Confidence 679999999999999999999976 3788888666655 444444333 1 1122 234445556668999
Q ss_pred HHHHHHHHHHhhh-ccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchh----hHHHHHHHHHHHHhh
Q 018804 89 VTLTLNMYFASLR-YTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKV----LGTLVSLAGVTIMTV 157 (350)
Q Consensus 89 ~~~~~~~~~~al~-~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~----~~~~l~~~Gv~l~~~ 157 (350)
.++++.+|+.+.+ +.+++.+.++.+..|+...+.+++++||+.+++ ++ +|.++.+.|+.++..
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence 7999999999999 999999999999999999999999999999999 99 999999999988753
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.76 E-value=3.7e-07 Score=73.70 Aligned_cols=133 Identities=17% Similarity=0.297 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhC------CCCchHHHHHHHHHHHHHHHHHHHhhccccCCc----c-------CHHH
Q 018804 15 PLLLMVLAQLSYTFLYFITEASFNH------GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK----L-------TLAL 77 (350)
Q Consensus 15 g~~~~l~~~~~~~~~~~~~k~~~~~------g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~ 77 (350)
|.++++.+.++.+...+..|...++ ..++.++..+....+.+++.+.....++.+..+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678899999999999999987665 689999999999999999999887765543110 0 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHH
Q 018804 78 FLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTI 154 (350)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l 154 (350)
+...+..|++ ..+.+...+..++++++...++......+.+.++++++++|+++.. ++.|++++++|+.+
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 5556667777 5678889999999999999999999999999999999999999999 99999999999875
No 59
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.72 E-value=6.8e-07 Score=79.92 Aligned_cols=135 Identities=17% Similarity=0.252 Sum_probs=109.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHH-HHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVT-YRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT 90 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 90 (350)
...|..+.+.+++.|+...+..|... + .++..... +..........+... ...+ .....+.+......|+++.+
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999876 4 67766666 444422222222221 1111 35567788999999999887
Q ss_pred HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
+++.+++++++..+++.++.+..+.|++..++++++++|+++.. +++|..+.+.|+.+...
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999 99999999999998864
No 60
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.71 E-value=1.5e-07 Score=81.09 Aligned_cols=140 Identities=10% Similarity=0.148 Sum_probs=114.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc-ccchhhHHHHHHHhHhHH
Q 018804 184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWR-IGLNIDLWSTIYGGVVVS 262 (350)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~gi~~~ 262 (350)
..|+++++.|-+.|+....+.|-+.+. ++..+..++.+.+.+..+.......+...-+. ...++.+......+.. -
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 579999999999999998886655444 77889999999888888877776654322222 2234456666666664 5
Q ss_pred HHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 263 GLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
...+..|.+|.++....++++-.+++|.+.+++|.++++|+++..|++.+++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999999999999999999999999999999988876554
No 61
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.71 E-value=2.8e-08 Score=86.41 Aligned_cols=274 Identities=12% Similarity=0.136 Sum_probs=165.4
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcc-ccCCccCHHHHHHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLER-KIRPKLTLALFLEIFVLSLVGV 89 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 89 (350)
+...|..+++.+.++.|.+..+-|+...+ ... .-.+.+ ...+.. + -..++.|.+..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~------------------~~~ra~~gg~~yl--~--~~~Ww~G~ltm 74 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA------------------SGLRAGEGGYGYL--K--EPLWWAGMLTM 74 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh------------------hcccccCCCcchh--h--hHHHHHHHHHH
Confidence 45788999999999999999999988766 111 001111 111122 1 13455666667
Q ss_pred HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804 90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP 169 (350)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 169 (350)
.++...-|.|+.+.|.+.++++.+++-++.++++..++||+++.. ..+|+.++++|-.++... +|......+
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t- 146 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIES- 146 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCccccccc-
Confidence 778888889999999999999999999999999999999999999 999999999999998764 332211100
Q ss_pred CccCcccchhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHhhhcC--chhHHHHHHHHHHHHHHH-------HHHHHHhcC
Q 018804 170 PIHIQRNNIIQEQWLKGSFLT-IASSITWSAMYIMQAITLKRYP--AQLSLTTWMCFLGAAQSA-------VFTVIVARK 239 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~-l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-------~~~~~~~~~ 239 (350)
..+-.......+++.- ..-.....+-.... .+++. +.+.+.....+.|.+..+ .+-.....+
T Consensus 147 -----~~el~~~~~~~~Fliy~~~iil~~~il~~~~---~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~ 218 (335)
T KOG2922|consen 147 -----VEEVWELATEPGFLVYVIIIILIVLILIFFY---APRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN 218 (335)
T ss_pred -----HHHHHHHhcCccHHHHHHHHHHHHHHHheee---cccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC
Confidence 0000111111222211 11111111111121 22221 344444444333322111 111111111
Q ss_pred CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--c----hhhhhhh
Q 018804 240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKL--F----LGSIVGA 312 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~--t----~~~~iG~ 312 (350)
.+ ...+..|..++.+.. |........++|++..+++.++.+.| .-..++++.|.++|+|-- + .....|+
T Consensus 219 -~q--l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf 294 (335)
T KOG2922|consen 219 -NQ--LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGF 294 (335)
T ss_pred -cc--cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhH
Confidence 12 222345555555444 55666677789999999988876555 456777788889998854 2 2456789
Q ss_pred HHHhhhheeeeeccc
Q 018804 313 VVVIGGLYLLLWGKE 327 (350)
Q Consensus 313 ~li~~g~~l~~~~~~ 327 (350)
..++.|++++...|.
T Consensus 295 ~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 295 VTIFLGIFLLHRTKD 309 (335)
T ss_pred HHhhheeeEeeeecc
Confidence 999999999965443
No 62
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.70 E-value=7e-07 Score=82.17 Aligned_cols=139 Identities=15% Similarity=0.192 Sum_probs=102.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC------CCCchHHHHHHHHHHHHHHHHHHHhhccccCC-----------ccC
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNH------GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-----------KLT 74 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~------g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----------~~~ 74 (350)
...|.++++++++.|+...+..|...++ ..++.....+....+.++++|+....+..... ...
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 3569999999999999999999997764 14566677777888888888887543221100 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHH
Q 018804 75 LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTI 154 (350)
Q Consensus 75 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l 154 (350)
..........+.+...+.+.+.+++++++++..+++...+.|+++.++++++++|+++.. +++|.++++.|+.+
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 111111122222223344444446999999999999999999999999999999999999 99999999999987
Q ss_pred Hh
Q 018804 155 MT 156 (350)
Q Consensus 155 ~~ 156 (350)
..
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 64
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.64 E-value=1e-06 Score=66.71 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 81 IFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
....++++.++++.++..++++.|.+.+..+.++.++++.+++++++|||++.. +++|+.+++.|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 344455778889999999999999999999999999999999999999999999 9999999999999885
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.55 E-value=5.3e-07 Score=68.23 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=61.0
Q ss_pred hHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 258 GVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 258 gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
++++.++++.++..++++.+.+.+-.+.++.++++.+.++++|||+++..+++|.+++++|++++.
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345678899999999999999999999999999999999999999999999999999999987764
No 65
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.52 E-value=2.8e-06 Score=71.57 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=118.3
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804 9 VYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG 88 (350)
Q Consensus 9 ~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (350)
..-+-.|..+++.+..+|+.+.+..|.+-+. .+.-.-+..-+.++.++.+|+..-..... -.++......+..++++
T Consensus 143 ~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlS 219 (292)
T COG5006 143 WSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLS 219 (292)
T ss_pred CcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHh
Confidence 3446789999999999999999999988654 56666677789999999999875432222 34666677888899999
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
..+.+.+-..+++..|...-+++.++.|.+.++.++++++|+++.. ||.++...+.+..=.+
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST 281 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999 9999999988876443
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.52 E-value=3.2e-06 Score=65.57 Aligned_cols=119 Identities=19% Similarity=0.257 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL 93 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 93 (350)
.++++++++.++-+..-++.|...++ .+....... . ... .... ......+..|+++.++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~----~~~~------------~~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAA----LLAF------------GLALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHH----HHHH------------hccHHHHHHHHHHHHHHH
Confidence 46788888888889999999998876 544332221 0 000 0000 001235778888899999
Q ss_pred HHHHHhhhccCcchhhhhhchhhHHHHHHHHH--HhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 94 NMYFASLRYTSPTFVASVVNTVAAVTFVIAVV--LRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 94 ~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~--~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.++.+++++.|.+.+..+.+..++++.+.++. ++||+++.. +++|+++.++|++++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999888888885 899999999 99999999999999863
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.49 E-value=4.4e-06 Score=75.38 Aligned_cols=141 Identities=15% Similarity=0.077 Sum_probs=114.0
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC--ccCHHHHHHHHHHHHH
Q 018804 10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP--KLTLALFLEIFVLSLV 87 (350)
Q Consensus 10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 87 (350)
.+..+|-++++.++.++|..++..++..++ .++.++..+-.+.+.++..+.....++++.. +.+.+.....+..+++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 467899999999999999999999998887 8999988888888888888877666665533 2344434333333333
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY 158 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 158 (350)
....+.+.-..+++.+++...+-..++.++..++..+++|+++++. .++|.+++++|.++....
T Consensus 243 -lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 243 -LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA 306 (334)
T ss_pred -HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence 5556667778899999988888888899999999999999999999 999999999999988653
No 68
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.29 E-value=1.9e-07 Score=79.03 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=102.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhH
Q 018804 182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVV 261 (350)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~ 261 (350)
..++|..+..++ ..+...++..++..+. +|.......++.-.+...|..++..+.. +.....+.| +++=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehhh-
Confidence 446888888888 8888888888888877 6677766666655555555554332211 111111222 2233443
Q ss_pred HHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 262 SGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
+..+..+.++++++.+.+.+.++...+|+++.++++++++|+.|....+|..+.+.|++++.+..
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 45677788999999999999999999999999999999999999999999999999999998654
No 69
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.21 E-value=3.3e-05 Score=67.12 Aligned_cols=117 Identities=12% Similarity=0.075 Sum_probs=92.1
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHH
Q 018804 10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGV 89 (350)
Q Consensus 10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (350)
.+..+++..++++.+.+..+..+.|+. +.+|....+=+.+-..+--..+.... + ++...|..++-++.|++ .
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~---~~~~~k~~~~nil~G~~-w 205 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-K---KPFFEKKSWKNILTGLI-W 205 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-c---ccccccchHHhhHHHHH-H
Confidence 345789999999999999999999985 47888777765544444433333322 1 13333456777888999 8
Q ss_pred HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccc
Q 018804 90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLR 134 (350)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~ 134 (350)
..++.+++.|.+....+.+-.+.++..++..+-+.+++||+-+++
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 999999999999999999999999999999999999999998777
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.20 E-value=4.3e-05 Score=68.99 Aligned_cols=129 Identities=13% Similarity=0.062 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhhcC-c--hhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHh
Q 018804 196 TWSAMYIMQAITLKRYP-A--QLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWC 272 (350)
Q Consensus 196 ~~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a 272 (350)
++..+.+.++++.++.. . +..+++.++....+...+.......+ . .....+......++ ...++..+-+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILSF-LFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHHH-HHHHHHHHHHHH
Confidence 34456677888776643 4 77888888888777777666543311 1 12223444444454 477888899999
Q ss_pred hccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804 273 TDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH 330 (350)
Q Consensus 273 ~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~ 330 (350)
+++++.....+.....|+..+++++++++++.+..++.+++++.+|+++....+.+++
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 9999999999999999999999999999999999999999999999999987765544
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.12 E-value=1.1e-05 Score=61.33 Aligned_cols=69 Identities=19% Similarity=0.342 Sum_probs=59.4
Q ss_pred HhHHHHHHHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 259 VVVSGLIVFIQLWCTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
+++.++++.++..++|+.+.+.+=.+ .-+..+.+.+.++++|||++|+.+++|+.++++|++.+....+
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 45677899999999999999765544 5688999999999999999999999999999999998865543
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.10 E-value=2.8e-05 Score=69.62 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=89.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhH
Q 018804 181 EQWLKGSFLTIASSITWSAMYIMQAITLKRYPA-QLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGV 259 (350)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi 259 (350)
.++..|..+++.++++.+....++|+...+.+. +.... . ...+......|+.-+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-------------------~--~~~~~l~~~~W~~G~---- 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-------------------S--GGRSYLRRPLWWIGL---- 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-------------------c--hhhHHHhhHHHHHHH----
Confidence 355899999999999999999999998777521 01000 0 000000111233322
Q ss_pred hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
+...++..+...|+...+++.++.+..+..++..+++..+++|+++...+.|+.+++.|..+.....
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 2344566677889999999999999999999999999999999999999999999999987766443
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=98.01 E-value=0.00022 Score=56.14 Aligned_cols=132 Identities=15% Similarity=0.196 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI 265 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~ 265 (350)
..++++.++..-++......++.++..+|....+..+..+.+.......+.+.. ++.......|+..+ -|+ ....-
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 357889999999999999999999885699999999999999998888876643 22222233455544 354 46667
Q ss_pred HHHHHHhhccCCcchhh-hhhhHHHHHHHHHHHH----HhccccchhhhhhhHHHhhhhee
Q 018804 266 VFIQLWCTDKRGPVFAT-MFNPVSTILVAILAYF----VFGEKLFLGSIVGAVVVIGGLYL 321 (350)
Q Consensus 266 ~~~~~~a~~~~~~~~~~-~~~~~~pv~~~l~~~~----~~~e~~t~~~~iG~~li~~g~~l 321 (350)
..+..+..++.++.... ....-+-+.+.++|.+ .-++++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77888999999997655 5556677788888876 23467899999999999999864
No 74
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.84 E-value=6.6e-05 Score=56.42 Aligned_cols=68 Identities=16% Similarity=0.306 Sum_probs=58.2
Q ss_pred HhHHHHHHHHHHHhhccCCcchhh-hhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 259 VVVSGLIVFIQLWCTDKRGPVFAT-MFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
+++.++++.++..++|+.+.+.+= .-.-+..+.+++.++++|||++++.+++|+.++++|++++...+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 446778999999999999987654 44667888899999999999999999999999999999986544
No 75
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.79 E-value=0.024 Score=50.74 Aligned_cols=299 Identities=11% Similarity=0.104 Sum_probs=177.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhc-cc----cCCccCHHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLE-RK----IRPKLTLALFLEIFVLSL 86 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~-~~----~~~~~~~~~~~~~~~~g~ 86 (350)
-..|+++..+..+.-+..++-.|...+ . +++....-..+-.-+..|+..-.- -+ .....+...+....+.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG--W-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC--c-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 357888999999999999988887532 3 333333333333333344432211 11 112344556777888999
Q ss_pred HHHHHHHHHHHHhhhccCcchhh-hhhchhhHHHHHHHHHHhccccc-cccccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804 87 VGVTLTLNMYFASLRYTSPTFVA-SVVNTVAAVTFVIAVVLRLETLD-LRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR 164 (350)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~il~~~~~~e~~~-~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~ 164 (350)
+ .+++...|=.+++|+..+... +...+..++..++-.++.++--. ..++-+...++|++++++|+.+..........
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 9 889999999999999988775 44556666666665555432110 11122334799999999999999653211111
Q ss_pred CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh------hhcC-chhHH----HHHHHHHHHHHHHHHH
Q 018804 165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITL------KRYP-AQLSL----TTWMCFLGAAQSAVFT 233 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~------~~~~-~~~~~----~~~~~~~~~i~~~~~~ 233 (350)
. . +++..+.+..+|.++++++++..+..++-...-. .... +|+.. ....+..+.+.-+...
T Consensus 161 ~--~------~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc 232 (344)
T PF06379_consen 161 E--L------GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC 232 (344)
T ss_pred h--h------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence 0 0 1113346678999999999999988887643211 1111 22222 2233444555566655
Q ss_pred HHHhc---CCc---cccc---cchhhHHHHHHHhHhHHHHHHHHHHHhhccCCc----chhhhhhhHHHHHHHHHHHHHh
Q 018804 234 VIVAR---KPA---DWRI---GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGP----VFATMFNPVSTILVAILAYFVF 300 (350)
Q Consensus 234 ~~~~~---~~~---~~~~---~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~pv~~~l~~~~~~ 300 (350)
++... +.. +... .........+..|++ =..++++|-.+-.+.+. .--.+.+.+..+++-+++ +++
T Consensus 233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG-l~l 310 (344)
T PF06379_consen 233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG-LIL 310 (344)
T ss_pred HHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH-HHH
Confidence 55322 211 1111 112345555555553 55667777777776664 445578888999999999 456
Q ss_pred ccc------cchhhhhhhHHHhhhheeeee
Q 018804 301 GEK------LFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 301 ~e~------~t~~~~iG~~li~~g~~l~~~ 324 (350)
+|- .-..-++|+++++.+++++-.
T Consensus 311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 662 223446788888888766543
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.76 E-value=0.00053 Score=51.34 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804 86 LVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
..++.+++++...++|+.|.+.+-.+ .....+.+.+++++++||++++. +++++.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 33477789999999999999998654 45888999999999999999999 999999999999886
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.74 E-value=0.00017 Score=54.92 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHhhhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 84 LSLVGVTLTLNMYFASLRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 84 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
..+.++++++.++..++++.|.+.+-.+. .+.-+.+.+++.++++|+++.. +++|+.+.++|++.+-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 44555888999999999999999997665 6999999999999999999999 99999999999988843
No 78
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.73 E-value=0.00081 Score=52.97 Aligned_cols=139 Identities=13% Similarity=0.142 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHH
Q 018804 184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSG 263 (350)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~ 263 (350)
....+.++.++.+-.+..-...++.+..++|.......+..|.+....+.++.+.. .++.......|+..+. |++ .+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~~G-G~l-Ga 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAWIG-GLL-GA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHHHc-cch-hh
Confidence 46678889999999999999989988886799999999999999888888874332 2333222334544442 443 32
Q ss_pred HHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhc----cccchhhhhhhHHHhhhheeeeec
Q 018804 264 LIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFG----EKLFLGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 264 ~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~----e~~t~~~~iG~~li~~g~~l~~~~ 325 (350)
+=.+.......+.+++ .......-+-+.+.+.|.+=+. .+++..+++|++++++|+++..+.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 2233344556666664 5667777788888888877654 567999999999999996665543
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.71 E-value=0.00024 Score=53.44 Aligned_cols=67 Identities=13% Similarity=0.253 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.+.++++++.++..++++.|.+.+-.+ ..+..+.+.+++++++||++++. +++|+.+.++|++.+-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 455578888999999999999999766 55889999999999999999999 99999999999999853
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.00026 Score=52.14 Aligned_cols=66 Identities=26% Similarity=0.260 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhh-hhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVA-SVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
.+++...++.++-.++|+.|.+.+- +-...-.+.+++.++++++|++++. +++++.+.+.|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 3444677899999999999999885 5555889999999999999999999 9999999999999884
No 81
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.62 E-value=0.00026 Score=61.51 Aligned_cols=80 Identities=9% Similarity=0.148 Sum_probs=69.3
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
++......-++ ..++...+.+.++++.+++...++..++.+++.++++++++++++..||++..+..+|+.+.......
T Consensus 15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 34444444455 37788899999999999999999999999999999999999999999999999999999998876654
Q ss_pred C
Q 018804 329 D 329 (350)
Q Consensus 329 ~ 329 (350)
.
T Consensus 94 ~ 94 (244)
T PF04142_consen 94 S 94 (244)
T ss_pred c
Confidence 4
No 82
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.57 E-value=0.00026 Score=52.16 Aligned_cols=66 Identities=20% Similarity=0.311 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804 260 VVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~ 325 (350)
++..+++.+...++|+.+.. -.++-.-.-.+.+.+.++++|+|++++.+++|..++++|++.....
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 35678999999999999985 5677788888999999999999999999999999999999887654
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.57 E-value=0.00052 Score=51.07 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804 86 LVGVTLTLNMYFASLRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
+.+++.++.+...++++.|.+.+-.+. ....+.+.+++++++||++++. +++++.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 445788999999999999999986554 4899999999999999999999 9999999999999883
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.54 E-value=0.00021 Score=53.58 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018804 20 VLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFAS 99 (350)
Q Consensus 20 l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 99 (350)
++..++||.++++.|...+. .++..-.. |..-.... . -.+++... .+.-+..+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~----L---------l~n~~y~i-----pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF----L---------LLNPKYII-----PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH----H---------HHhHHHHH-----HHHHHHHHHHHHHHH
Confidence 34578999999999998775 55443331 21111111 0 11222222 222256678888999
Q ss_pred hhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804 100 LRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 100 l~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
+...+.+.+.++. ++.=++|++.++++.+|..+++ .++|+++.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999885 7888999999998888888888 999999999998764
No 85
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.54 E-value=0.0015 Score=48.89 Aligned_cols=64 Identities=9% Similarity=0.134 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 260 VVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
.+..+++.+...++|+.+.. ..++-.-+..+.+.+.++++|+|++++.+++|+.+++.|++...
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45678999999999999986 45666778888999999999999999999999999999988763
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.53 E-value=0.0027 Score=49.99 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804 16 LLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN 94 (350)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (350)
.++.+++...-+....++....+. .+ |+..++..+..+.+++..+....+++.....+...|+ ...-|++| +..-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence 456677777777788887777776 55 9999999999999999888877665433222222233 33367774 55777
Q ss_pred HHHHhhhccCcchhhhhhc-hhhHHHHHHHHH----HhccccccccccccchhhHHHHHHHHHHH
Q 018804 95 MYFASLRYTSPTFVASVVN-TVAAVTFVIAVV----LRLETLDLRNARGMAKVLGTLVSLAGVTI 154 (350)
Q Consensus 95 ~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~----~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l 154 (350)
+..+..+..+++.+..+.- -+-+...++..+ .-|+++++. +.+|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 7788889999888876555 445555566664 366888888 99999999999864
No 87
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.50 E-value=0.00044 Score=51.44 Aligned_cols=66 Identities=12% Similarity=0.188 Sum_probs=57.5
Q ss_pred HhHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804 259 VVVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~ 324 (350)
+++..+++.+...++|+.+.. ..++-.-+..+.+.+.++++|+|++++.+++|+.++++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 345778999999999999986 456667788899999999999999999999999999999988753
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.49 E-value=0.001 Score=59.55 Aligned_cols=142 Identities=13% Similarity=0.217 Sum_probs=114.9
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhC---CCCchHHHHHHHHHHHHHHHHHHHhhcc---ccCCccCHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNH---GMNPHVYVTYRHIVAGIAMFPFAYFLER---KIRPKLTLALFLEIFVL 84 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~---g~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 84 (350)
|...|-++.+++++++|.+.++.|.-.++ .++--.+.-+--++.+++++|..+.-+. ....-++..+....+..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 45789999999999999999999986654 2455555555667777888876544332 22223445567778889
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY 158 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 158 (350)
++++.+++.++|..|.-.+++-.+++-..++....++.-.++.+..+++. .++|.+.+++|-+++...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheecc
Confidence 99999999999999999999999999999888888888998889999999 999999999999988653
No 89
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.42 E-value=0.0092 Score=54.20 Aligned_cols=146 Identities=14% Similarity=0.080 Sum_probs=95.6
Q ss_pred hhchHHHHHHHHHHHHHHHHH-------HHHHHhhhCCCCchHHHHHHHH---HHHHHHHH-HHHh--hccccC-----C
Q 018804 10 YLRFKPLLLMVLAQLSYTFLY-------FITEASFNHGMNPHVYVTYRHI---VAGIAMFP-FAYF--LERKIR-----P 71 (350)
Q Consensus 10 ~~~~~g~~~~l~~~~~~~~~~-------~~~k~~~~~g~~p~~~~~~r~~---~~~l~l~~-~~~~--~~~~~~-----~ 71 (350)
.+..||+..++++.+.++... ...+.+.+.|.++.....-.+. ++..+.-. +..+ +++++. +
T Consensus 170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF 249 (345)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence 345799999999999999999 6666655556777766665555 44433322 2222 121111 1
Q ss_pred ccC----HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhh---hh-chhhHHHHHHHHHHhccccccccccccchhh
Q 018804 72 KLT----LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVAS---VV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVL 143 (350)
Q Consensus 72 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~ 143 (350)
..+ .+......+.|++ ..+++.+|..+-...+.+.+.+ +. ++.-++..+-+. ++||+=+..+|..+.-++
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~ 327 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL 327 (345)
T ss_pred cccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence 112 2233333677777 7889999999999887665555 55 444455555555 699998866666667799
Q ss_pred HHHHHHHHHHHHhh
Q 018804 144 GTLVSLAGVTIMTV 157 (350)
Q Consensus 144 ~~~l~~~Gv~l~~~ 157 (350)
|+++.++|..++..
T Consensus 328 G~vliI~g~~lig~ 341 (345)
T PRK13499 328 GCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998864
No 90
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.32 E-value=0.00092 Score=59.84 Aligned_cols=138 Identities=14% Similarity=0.224 Sum_probs=111.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhh---CCCCchHHHHHHHHHHHHHHH-HHHHhhccccC-----CccCHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFN---HGMNPHVYVTYRHIVAGIAMF-PFAYFLERKIR-----PKLTLALFLEIF 82 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~---~g~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~~ 82 (350)
+..|...++.+.+..+.-.++.|..+. +..+++....+..-.+...++ |+....+.... ...+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 568999999999999999999999883 358899998888888888888 87655433222 122333 33334
Q ss_pred HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
..+++ ..+.+...|..+..+++-.-++....--+++.+.++++++++.++. +..|.+++++|+.+-..
T Consensus 240 ~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence 44466 5667788889999999999999999888888899999999999999 99999999999998864
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.18 E-value=0.0013 Score=48.05 Aligned_cols=57 Identities=25% Similarity=0.358 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHHHhhccCCcchh-hhhhhHHHHHHHHHHHHHhccccchhhhhhhHHH
Q 018804 259 VVVSGLIVFIQLWCTDKRGPVFA-TMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVV 315 (350)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li 315 (350)
+.+.++++.++..++|+.+.+.+ .+..-+..+...+.|.+++||++|+.+++|+.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33577889999999999999877 5556689999999999999999999999999875
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.08 E-value=0.0083 Score=52.06 Aligned_cols=186 Identities=8% Similarity=0.033 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804 15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN 94 (350)
Q Consensus 15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 94 (350)
|++.++++++++|..++-.|.. +. .|++.+-++.+....+.-+......+. ++ -....++.|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~----f~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---PP----FYPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---Cc----ceeHHHhhhhh-hhcCce
Confidence 5678899999999999999974 44 577777666666555554444443222 21 24556677777 788999
Q ss_pred HHHHhhhccCcchhhhhhchhhHHHHHH-HHH-HhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC---
Q 018804 95 MYFASLRYTSPTFVASVVNTVAAVTFVI-AVV-LRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP--- 169 (350)
Q Consensus 95 ~~~~al~~~~~~~~~~i~~~~pi~~~il-~~~-~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~--- 169 (350)
+-...++..+.+....+.++.-+.+.-. +.+ +++++.... +.....++|++++++|..+...-+.+........
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 9999999999999999988766555443 332 344433322 2234478999999999888865443331110000
Q ss_pred --Ccc----C-cc-----cch------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018804 170 --PIH----I-QR-----NNI------IQEQWLKGSFLTIASSITWSAMYIMQAITLKRY 211 (350)
Q Consensus 170 --~~~----~-~~-----~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 211 (350)
+.+ . ++ +++ ...+...|..+++++++.|+...+=.....++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 000 0 00 001 112467899999999999998877666555543
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.01 E-value=0.0071 Score=44.11 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHH
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVS 148 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~ 148 (350)
.+.+++++..++..++++.|.+.+-.+ ..+..+.+.+++.+++||++|.. |+.|+.+.
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence 344578899999999999999999655 56999999999999999999999 99998763
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.87 E-value=0.011 Score=44.49 Aligned_cols=109 Identities=8% Similarity=0.074 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHH
Q 018804 192 ASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLW 271 (350)
Q Consensus 192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~ 271 (350)
+.++.|+..+-+.|+..+..+ +..-.. +..-.... ++ ..++.+..+ .....+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll----------~n~~y~ipf-----~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LL----------LNPKYIIPF-----LLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HH----------HhHHHHHHH-----HHHHHHHHHHHH
Confidence 456889999999999887763 222111 21111111 10 011122222 234456668899
Q ss_pred hhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804 272 CTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL 322 (350)
Q Consensus 272 a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~ 322 (350)
.+.+.+.+.+..+ +.+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 9999999988877 59999999999988888888999999999999998764
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.69 E-value=0.0037 Score=54.19 Aligned_cols=131 Identities=13% Similarity=0.112 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI 265 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~ 265 (350)
|.+..+.|+++++-..+=.|+.... |++....+++....+......++.+.. . .. .+.++ .|. .-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~--f~----p~aml-gG~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--P--FY----PWAML-GGA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--c--ce----eHHHh-hhh-hhhcC
Confidence 5667888999999888886655533 788888888777777776666543321 1 00 11111 122 23445
Q ss_pred HHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHH-Hhcccc-----chhhhhhhHHHhhhheeeeecccC
Q 018804 266 VFIQLWCTDKRGPVFATMF-NPVSTILVAILAYF-VFGEKL-----FLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~-~~~e~~-----t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
..+-.-.+|.++....-.+ ...+.+.+-..+.+ +||+++ ....++|++++++|..++..-|.+
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 5555566666666544433 34466677776665 565543 367789999999998887765443
No 96
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.66 E-value=0.0019 Score=56.91 Aligned_cols=127 Identities=21% Similarity=0.227 Sum_probs=94.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhH
Q 018804 180 QEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGV 259 (350)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi 259 (350)
..++..|..+++.+.+..+...+..|+..++. .. .. ......+........| +.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~-~~---~~----------------~ra~~gg~~yl~~~~W----w~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRA-GA---SG----------------LRAGEGGYGYLKEPLW----WAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHH-hh---hc----------------ccccCCCcchhhhHHH----HHHH
Confidence 34557899999999999999999988888775 11 00 0111111111111122 2345
Q ss_pred hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804 260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH 330 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~ 330 (350)
+...++-...+.|....+++.++.+..++.+.+.+++..+++|+++....+|+++.++|...+..+..+++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 56677888888888899999999999999999999999999999999999999999999777776655544
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.0021 Score=54.34 Aligned_cols=135 Identities=11% Similarity=0.101 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804 186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI 265 (350)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~ 265 (350)
..+.+++=++.|+..-....|. ..+|...+.-+.+.+.++.+...++..+.. ....+..-...|++ =.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~~------T~~~~iv~~isG~~-Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPEL------TLTIFIVGFISGAF-WSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCcc------chhhHHHHHHhhhH-hhhh
Confidence 4677888889999877764322 226666666666666666666665432111 12234444555554 5678
Q ss_pred HHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhccccchhhh----hhhHHHhhhheeeeecccCCc
Q 018804 266 VFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKLFLGSI----VGAVVVIGGLYLLLWGKEGDH 330 (350)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~t~~~~----iG~~li~~g~~l~~~~~~~~~ 330 (350)
+..++++.+..+.+++..+.. .+-+-+.+++.++|||..++.++ +..++++.|+++-.++++.++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk 142 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK 142 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence 999999999999999887654 66777889999999999987765 356778889999887765433
No 98
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.33 E-value=0.15 Score=45.84 Aligned_cols=141 Identities=9% Similarity=0.021 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC---chhHHHHHHHHHHHHHHHHHHHHHh-----cCCcc---ccccchhhHHHHH
Q 018804 187 SFLTIASSITWSAMYIMQAITLKRYP---AQLSLTTWMCFLGAAQSAVFTVIVA-----RKPAD---WRIGLNIDLWSTI 255 (350)
Q Consensus 187 ~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~l 255 (350)
....+...+.++......|...++.+ .|.+..+..-+.-.+++....+..+ ..... +....+.+..-+.
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 34445555566666666666655432 3445555554555555555554432 11111 1111221222222
Q ss_pred HHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 256 YGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 256 ~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
.-+. ..++.+.+++.+..+.++++..+..-+....+.+++.++++++++..||...++...|+.++.....+
T Consensus 97 vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 97 VPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 2222 36667779999999999999999999999999999999999999999999999999999999854443
No 99
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.29 E-value=0.018 Score=49.42 Aligned_cols=59 Identities=14% Similarity=0.004 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHH
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVT 153 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~ 153 (350)
...+..+..+.++|.++...++...+.++++.+++.++++|+++.. +++|+.+.+.|+.
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~ 220 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF 220 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence 5557778889999999999999999999999999999999999999 9999999998864
No 100
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=96.29 E-value=0.0063 Score=49.69 Aligned_cols=65 Identities=22% Similarity=0.347 Sum_probs=60.1
Q ss_pred HHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 264 LIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
.+.+.|..++++++++.++.+...+..+..+++++++++++...+++..++.+.|+++..+.+..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 35668999999999999999999999999999999999999999999999999999999876543
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.15 E-value=0.12 Score=40.82 Aligned_cols=136 Identities=15% Similarity=0.113 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLT 92 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 92 (350)
...++..+.+..+-.....++....+..-+|+.-.+.-+..+.+++..+.+.++++.......+..++.+.-|++|.. .
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~-~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAI-F 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhh-h
Confidence 345666777777777777777766666345999999999999999888887744433322223333444444555322 3
Q ss_pred HHHHHHhhhccCcchh-hhhhchhhHHHHHHHHHH----hccccccccccccchhhHHHHHHHHHHHH
Q 018804 93 LNMYFASLRYTSPTFV-ASVVNTVAAVTFVIAVVL----RLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 93 ~~~~~~al~~~~~~~~-~~i~~~~pi~~~il~~~~----~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
-..-........++.. .....-+-+...++..+= -+++++.. +++|+++.++|+.++
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 3233334444444433 344445555555554421 23556666 999999999995554
No 102
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.17 Score=44.55 Aligned_cols=139 Identities=13% Similarity=0.149 Sum_probs=109.2
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhccccCC-----ccCHHHHHHHHHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-----KLTLALFLEIFVL 84 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 84 (350)
+...|+.++....++=|..+...+...+. +++++.+.+.-.+...+.-.......+. .++ +..+..++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence 56788888888888878888777766663 7899999999999988887776543222 111 2334556667788
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
+.+ ..+++.+-++-++.-++-.-+.+.-+=-++..+++.++++.+++.. ||+|+.+.+.|..+=..
T Consensus 248 s~~-gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STC-GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHh-hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence 888 4668888888898888877778888888999999999999999999 99999999999887654
No 103
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.27 E-value=0.23 Score=42.06 Aligned_cols=138 Identities=17% Similarity=0.121 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc-C---CccCHHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI-R---PKLTLALFLEIFVLSLV 87 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~ 87 (350)
..|-++++++..+=|...........+ .-+.-.+.+...+-+.+.+..-+...+.-. . ...-+..++.+...+++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~ 250 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA 250 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456777777777777777766544332 122334444455555555433222211100 0 01123346677778888
Q ss_pred HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.++++++.+.-..+-+|-..+++..+--.|+.+++.++++.+++.+ ||+|.++.+.|...-..
T Consensus 251 -s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 251 -SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVV 313 (337)
T ss_pred -HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhh
Confidence 6889999999999999999999999999999999999999999999 99999999999877654
No 104
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.17 E-value=0.29 Score=43.45 Aligned_cols=139 Identities=12% Similarity=0.157 Sum_probs=106.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc-----CC-ccCHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI-----RP-KLTLALFLEIFVL 84 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~-~~~~~~~~~~~~~ 84 (350)
+..|+.++...++.-+...+..|...+. +.+-+.+.++..+.+.+.+....+..+... .. ..+...+-.+...
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence 3468999999999999999999987764 578889999999999999888775544311 11 1123335567778
Q ss_pred HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
+++|++ -.++-+++.+..++...++.....-..+.+...++.+++.++. ..+|+.++++|.++-..
T Consensus 235 cv~gf~-isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 235 CVMGFG-ISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHH-HHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence 888766 4557778999998888888886666667777777788999999 99999999999988764
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=94.58 E-value=0.25 Score=41.53 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHhhccccC----CccCHHHHHHHHHHHHHH
Q 018804 14 KPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR----PKLTLALFLEIFVLSLVG 88 (350)
Q Consensus 14 ~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 88 (350)
.|++.+...++.-+..-...|.-.+ .+..-+...++..+++.++++.+....+.... ...+.......++.|++
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~- 233 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC- 233 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-
Confidence 4566666667666666666665444 24778899999999999999988876543221 12334445567778888
Q ss_pred HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.+...++--+..+-++.+..++...+.-.-.++-+.++++|+.+.. .+.++.++++..++-..
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav 296 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV 296 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence 4556678888999999999999999998888899999999999999 99999999988777654
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.45 E-value=0.27 Score=44.22 Aligned_cols=141 Identities=9% Similarity=-0.013 Sum_probs=83.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHH--hcCCc-cccccchhhHHHHHHHh
Q 018804 182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIV--ARKPA-DWRIGLNIDLWSTIYGG 258 (350)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~g 258 (350)
+-..|+++..+++++.+.+.+-.||..+=.-+..... +.+++ -+..|..... .++.. -....+...+......|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv--~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV--QGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH--HHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 3478999999999999999998776543211222222 22222 1222222211 11111 11122233455555556
Q ss_pred HhHHHHHHHHHHHhhccCCcch-hhhhhhHHHHHHHHHHHHHhcc-------ccchhhhhhhHHHhhhheeeeecc
Q 018804 259 VVVSGLIVFIQLWCTDKRGPVF-ATMFNPVSTILVAILAYFVFGE-------KLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~l~~~~~~~e-------~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
++ =.++-..|-.++|+++.+. .++..-+..+++.++--++.|+ +-....++|+++.++|+.+..+.-
T Consensus 81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 64 5667778889999999864 4455666677777776555442 123467889999999999887643
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=93.37 E-value=1.3 Score=32.43 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCC------chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804 18 LMVLAQLSYTFLYFITEASFNHGMN------PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL 91 (350)
Q Consensus 18 ~~l~~~~~~~~~~~~~k~~~~~g~~------p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (350)
-++...++||..+.+.|..... .+ .-...+.|-.... ..+++++.. +.+ +-.
T Consensus 7 ~lvaVgllWG~Tnplirrgs~g-~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iP-Fll----Nqc 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSLG-WDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIP-FLL----NQC 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHhh-HhhccCchHHHHHHHHHHHHH----------------HHhHHHHHH-HHH----HHh
Confidence 4567788999999999987652 22 1222222221111 112222222 222 333
Q ss_pred HHHHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804 92 TLNMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
+..+||.-+++.+.+.+..+.+ +.-.|+.+.+..+-.|....+ .+.|..+...|..+.
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence 6778889999999999886665 677888888877655555555 889999999998775
No 108
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=91.16 E-value=0.17 Score=43.40 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=98.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhh-cCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHh
Q 018804 182 QWLKGSFLTIASSITWSAMYIMQAITLKR-YPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVV 260 (350)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~ 260 (350)
+.++|..++-.-+++-......+..+.++ ...|...++.....-.++-.+..++.... . ...|...+.++.+
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~----~~~~~hYilla~~ 87 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---I----KAKWRHYILLAFV 87 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---H----HHHHHHhhheeEE
Confidence 34566666644444444444444555555 33677777777766667777776654311 1 1123444555553
Q ss_pred HHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804 261 VSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~ 328 (350)
..=++++...|.++++.+.+.++---..+...+++|++++.+-.+.++.|+++-++|++++...+-.
T Consensus 88 -DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 88 -DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred -eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 6667777889999999999999999999999999999999999999999999999999998866543
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=90.88 E-value=0.48 Score=41.30 Aligned_cols=66 Identities=11% Similarity=0.018 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804 260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG 325 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~ 325 (350)
+|...+-.+.+.++..++++...++.-...+|+-+++.-+++..++..||+|+..+.+|++.+-..
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 467778888999999999999999999999999999999999999999999999999998887644
No 110
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=90.61 E-value=3.2 Score=36.84 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=85.3
Q ss_pred HHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccccchh-hHHHHHHHhHhHHHHHHHHHHHhhccCCcc
Q 018804 202 IMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLNI-DLWSTIYGGVVVSGLIVFIQLWCTDKRGPV 279 (350)
Q Consensus 202 v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~ 279 (350)
.+.++..++.+=|+..+.++...-.......-...+. .++.....+.. ..-.+.-.|+ +++.=..+=+++++++..+
T Consensus 33 f~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlS 111 (349)
T KOG1443|consen 33 FYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLS 111 (349)
T ss_pred HHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeee
Confidence 3445555555557777777766554444444333332 11111111111 2222233343 5777778889999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
..++.-...++|..++|.++-=|++++.-..=..++-+|+++..+++.
T Consensus 112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 999999999999999999988899999998888999999999887653
No 111
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.96 E-value=0.39 Score=41.71 Aligned_cols=142 Identities=20% Similarity=0.173 Sum_probs=101.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc----CCcc-CHHHHHHHHHHH
Q 018804 12 RFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI----RPKL-TLALFLEIFVLS 85 (350)
Q Consensus 12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~~-~~~~~~~~~~~g 85 (350)
...|.++.+.+.+.-+...+..|..... |---+.++++..+.+.++++|.+.+.+.-+ .++. ..+-|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4689999999999999999999976554 223577889999999999999987754321 1233 566777788889
Q ss_pred HHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccC
Q 018804 86 LVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKG 160 (350)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 160 (350)
++|+.+++.. .+=++.++|-.--+-..--...-.+++..+++|..+.. .|-+-++.+.|-..-+..+.
T Consensus 263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence 9987766533 23455555543333333334445577888999999998 99999999999888776543
No 112
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=86.82 E-value=11 Score=33.16 Aligned_cols=137 Identities=15% Similarity=0.170 Sum_probs=88.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHh-------hcccc---CCcc---CHH
Q 018804 11 LRFKPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYF-------LERKI---RPKL---TLA 76 (350)
Q Consensus 11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~-------~~~~~---~~~~---~~~ 76 (350)
.-..|+.++.++.+.-+.+.+.....-+ +|-++-+..|+....+.+.++...-- ..+.+ .+.. -+.
T Consensus 161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~ 240 (330)
T KOG1583|consen 161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPS 240 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccH
Confidence 3457888888888888888887775444 48999999999999999887654210 00000 0111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc----cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804 77 LFLEIFVLSLVGVTLTLNMYFASLRY----TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV 152 (350)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv 152 (350)
.|..++. +++.+++=..+... +++-.+++...+=-.+..+++.+.++.++++. .|+|..+.++|.
T Consensus 241 ~~~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt 309 (330)
T KOG1583|consen 241 MWVYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGT 309 (330)
T ss_pred HHHHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHH
Confidence 2333332 23333222222222 23334556666777888899999999999999 999999999999
Q ss_pred HHHhhc
Q 018804 153 TIMTVY 158 (350)
Q Consensus 153 ~l~~~~ 158 (350)
.+....
T Consensus 310 ~~fa~~ 315 (330)
T KOG1583|consen 310 LLFANV 315 (330)
T ss_pred HHHHHH
Confidence 988753
No 113
>PRK02237 hypothetical protein; Provisional
Probab=86.24 E-value=4 Score=30.20 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=40.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
..+...-...+.++++.+.+-+++|+...++|..+.++|+.++....
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 45677778888999999999999999999999999999987776554
No 114
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=86.24 E-value=6.9 Score=34.21 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHhhccccC-----CccCHHHHHHHHHHHH
Q 018804 13 FKPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR-----PKLTLALFLEIFVLSL 86 (350)
Q Consensus 13 ~~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~ 86 (350)
..|+.++-.+.+.=+...-+...+.. ++-+..+++++...++.++++..+.....-.. .+.+++.....++.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 45555555554444444444443333 34667889999999999998887765433111 2345556666666666
Q ss_pred HHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhcc
Q 018804 87 VGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYK 159 (350)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 159 (350)
.| .++..+...=++.-++..++.+...--..+.+++++++.++++.. ..-+..+.+.|+.+=..++
T Consensus 269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence 64 335544444555567777777777778899999999999999998 8888999999998876543
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.31 E-value=2.1 Score=31.53 Aligned_cols=48 Identities=15% Similarity=0.256 Sum_probs=40.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
..+...-...+.+.++++.+-+++|+...++|..+.++|+.++....|
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 445666677888899999999999999999999999999888776543
No 116
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=78.00 E-value=67 Score=30.83 Aligned_cols=46 Identities=9% Similarity=0.086 Sum_probs=28.3
Q ss_pred hhhhhhHHHHHHHHHHHHHhcc-----ccchhhhhhhHHHhhhheeeeecc
Q 018804 281 ATMFNPVSTILVAILAYFVFGE-----KLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 281 ~~~~~~~~pv~~~l~~~~~~~e-----~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
..++..+.-+.=.++.++--++ .++..|++.+.++++|++++.+.+
T Consensus 226 f~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 226 FGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444444444332222 278899999999999987765443
No 117
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=76.10 E-value=19 Score=26.45 Aligned_cols=48 Identities=17% Similarity=0.247 Sum_probs=40.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
..+...-...+.+.++.+++-+..|+.+.++|..+-++|+.++....+
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 455667778888999999999999999999999999999888776643
No 118
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=75.79 E-value=1.8 Score=38.30 Aligned_cols=129 Identities=9% Similarity=0.023 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhc---c---ccC-------CccCHHHHHHHHHHH
Q 018804 19 MVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLE---R---KIR-------PKLTLALFLEIFVLS 85 (350)
Q Consensus 19 ~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~---~---~~~-------~~~~~~~~~~~~~~g 85 (350)
|+++.++||..+...|++.+++ -..+...+-+.++.++...+.-+.- . .+. ...++......+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~g-R~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRG-RLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcC-CccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 3567889999999999987663 2233455566666555444432211 1 111 234556566667777
Q ss_pred HHHHHHHHHHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHH
Q 018804 86 LVGVTLTLNMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTI 154 (350)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l 154 (350)
++ +.+++.+..+|+.+.+.+.+-++.. +.-+...++.++ +..|.++.+ --+.|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCce----EEEccHHHHHHHHHH
Confidence 77 8889999999999999988877665 333444444554 345554320 034455555555544
No 119
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=74.29 E-value=3.9 Score=30.08 Aligned_cols=31 Identities=23% Similarity=0.510 Sum_probs=26.8
Q ss_pred HHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804 293 AILAYFVFGEKLFLGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 293 ~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~ 323 (350)
+.++.++++|++++....|..+++++++.+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 5567889999999999999999998877654
No 120
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=71.63 E-value=60 Score=27.31 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCcchh
Q 018804 77 LFLEIFVLSLVGVTLTLNMYFASLRYTSPTFV 108 (350)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~ 108 (350)
.+++.+..++. ..+.+...+......|+...
T Consensus 145 ~~~k~~~~~~~-~~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 145 SWWKYILISVL-AMVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHccccCC
Confidence 34444444444 23344444444555666544
No 121
>PRK02237 hypothetical protein; Provisional
Probab=70.97 E-value=40 Score=25.03 Aligned_cols=40 Identities=15% Similarity=0.157 Sum_probs=33.5
Q ss_pred hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 112 VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 112 ~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.....+...+..+.+-++|++.. +++|..++++|+.++..
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 33556666677899999999999 99999999999998864
No 122
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=70.44 E-value=1.4 Score=38.38 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=0.0
Q ss_pred chhhhhhchhhHHHHHH-HHHHhcccc-ccccccccchhhHHHHHHHHHHHH
Q 018804 106 TFVASVVNTVAAVTFVI-AVVLRLETL-DLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 106 ~~~~~i~~~~pi~~~il-~~~~~~e~~-~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
+..+++++...+.+.++ -..++|+|+ -+. ..+++++.++-..+.
T Consensus 50 ~a~~vl~sfAvvliiIIiIImlF~RrLLCPL------GlLCiilimi~lLv~ 95 (381)
T PF05297_consen 50 GALTVLYSFAVVLIIIIIIIMLFKRRLLCPL------GLLCIILIMIVLLVS 95 (381)
T ss_dssp ----------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCcc------hHHHHHHHHHHHHHH
Confidence 33345555444333333 233355544 444 555555555544433
No 123
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=66.73 E-value=1.6 Score=26.30 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=8.0
Q ss_pred cchhhhhhhHHHhhhhe
Q 018804 304 LFLGSIVGAVVVIGGLY 320 (350)
Q Consensus 304 ~t~~~~iG~~li~~g~~ 320 (350)
|+|..++-.++++.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34444444444555543
No 124
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=66.70 E-value=76 Score=26.58 Aligned_cols=35 Identities=11% Similarity=0.262 Sum_probs=23.6
Q ss_pred HHHHHHHhccccchhhhhhhHHHh--hhheeeeeccc
Q 018804 293 AILAYFVFGEKLFLGSIVGAVVVI--GGLYLLLWGKE 327 (350)
Q Consensus 293 ~l~~~~~~~e~~t~~~~iG~~li~--~g~~l~~~~~~ 327 (350)
-.+|..++++..-+...+|..+.+ .|.+...++++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~~ 169 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRER 169 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 445777888888888888887753 46555555443
No 125
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=66.19 E-value=13 Score=27.31 Aligned_cols=59 Identities=14% Similarity=0.074 Sum_probs=46.1
Q ss_pred HHHHHHHHhhccCCcchhh-hhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804 264 LIVFIQLWCTDKRGPVFAT-MFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL 322 (350)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~~-~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~ 322 (350)
.+-.+|+..+++.+.+.+. .-+.+.-.++.+.+..+-.|...-..++|..++++|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 3556788888998887666 4456788888999977666667788899999999998764
No 126
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.53 E-value=9.3 Score=27.65 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=27.7
Q ss_pred HHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804 293 AILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW 324 (350)
Q Consensus 293 ~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~ 324 (350)
..+|.+.++|++.+..+.|..++..|++.+.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 45788999999999999999999999877653
No 127
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=62.78 E-value=31 Score=25.58 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=35.1
Q ss_pred hhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 110 SVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 110 ~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.--....+...+-.+.+-++|++.. +++|..++++|+.++..
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 3334666777778899999999999 99999999999999864
No 128
>PF15102 TMEM154: TMEM154 protein family
Probab=60.13 E-value=6.2 Score=30.98 Aligned_cols=23 Identities=9% Similarity=0.261 Sum_probs=12.0
Q ss_pred hhhHHHhhhheeeeecccCCcch
Q 018804 310 VGAVVVIGGLYLLLWGKEGDHQE 332 (350)
Q Consensus 310 iG~~li~~g~~l~~~~~~~~~~~ 332 (350)
++++|++..++++.+.|||+.|.
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHheeEEeecccCC
Confidence 34444555566666555554443
No 129
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=59.07 E-value=2.3 Score=37.72 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHH-HHHHHHHHhcC-------Ccccccc---chhhHHHHHHHhH
Q 018804 191 IASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQ-SAVFTVIVARK-------PADWRIG---LNIDLWSTIYGGV 259 (350)
Q Consensus 191 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~-------~~~~~~~---~~~~~~~~l~~gi 259 (350)
+++.+||+-+-..+|-..++...| ...++=+.++.++ .+++.+-.... +..++.. +...+...+.-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 467788888888887776654211 1122222222222 22222222211 1111111 1122333343444
Q ss_pred hHHHHHHHHHHHhhccCCcchhhhhh-hHHHHHHHHHHHHHhccccc--hhhhhhhHHHhhhheeee
Q 018804 260 VVSGLIVFIQLWCTDKRGPVFATMFN-PVSTILVAILAYFVFGEKLF--LGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~pv~~~l~~~~~~~e~~t--~~~~iG~~li~~g~~l~~ 323 (350)
.--++..+..+++...+.+.+-.+. .+..+.++.+.|+. +.+.+ ..-+.|+.++++++++-.
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 4567888888888888876655433 33444455566554 33333 345568888777766543
No 130
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=51.93 E-value=1.3e+02 Score=24.69 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=17.5
Q ss_pred HHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 018804 201 YIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVI 235 (350)
Q Consensus 201 ~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (350)
....|+..+|. +-.....+......+..+...+.
T Consensus 118 ~~~~~~~~~R~-~~i~ag~~v~l~~~~~~l~~~l~ 151 (194)
T PF07698_consen 118 IFSVRRIRSRS-DIIKAGLLVGLVNALMILALGLI 151 (194)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666665 44444555555555555555553
No 131
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=51.57 E-value=16 Score=28.57 Aligned_cols=13 Identities=23% Similarity=0.600 Sum_probs=6.3
Q ss_pred hhhhHHHhhhhee
Q 018804 309 IVGAVVVIGGLYL 321 (350)
Q Consensus 309 ~iG~~li~~g~~l 321 (350)
++|..+.+.|++.
T Consensus 90 i~g~~~~~~G~~~ 102 (136)
T PF08507_consen 90 IIGLLLFLVGVIY 102 (136)
T ss_pred HHHHHHHHHHHHH
Confidence 3455555555433
No 132
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=48.72 E-value=2.5e+02 Score=26.81 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=40.9
Q ss_pred HHHHHHhccccccccccccchhh--HHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHH
Q 018804 121 VIAVVLRLETLDLRNARGMAKVL--GTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWS 198 (350)
Q Consensus 121 il~~~~~~e~~~~~~~~~~~~~~--~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 198 (350)
.+-=++-|.|+++. |.+ |+.+++.=+++++ .+++...+..+.+.|+.|-.
T Consensus 313 flfE~~~~~~iHpi------QY~LVGlAl~lFYlLLLS----------------------lSEhi~F~~AYliAa~a~i~ 364 (430)
T PF06123_consen 313 FLFELLSKLRIHPI------QYLLVGLALVLFYLLLLS----------------------LSEHIGFNLAYLIAALACIG 364 (430)
T ss_pred HHHHHHhcCcccHH------HHHHHHHHHHHHHHHHHH----------------------HHhhhchHHHHHHHHHHHHH
Confidence 33335567888888 854 4444444444443 34445567777788888888
Q ss_pred HHHHHHHHHhhhc
Q 018804 199 AMYIMQAITLKRY 211 (350)
Q Consensus 199 ~~~v~~~~~~~~~ 211 (350)
+-..+.+...++.
T Consensus 365 Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 365 LISLYLSSVLKSW 377 (430)
T ss_pred HHHHHHHHHHhcc
Confidence 8888888777765
No 133
>PF15471 TMEM171: Transmembrane protein family 171
Probab=47.14 E-value=17 Score=31.62 Aligned_cols=18 Identities=28% Similarity=0.554 Sum_probs=13.9
Q ss_pred hhhhhhhHHHhhhheeee
Q 018804 306 LGSIVGAVVVIGGLYLLL 323 (350)
Q Consensus 306 ~~~~iG~~li~~g~~l~~ 323 (350)
..|+.|-.+++.|+....
T Consensus 161 slQImGPlIVl~GLCFFV 178 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFV 178 (319)
T ss_pred ehhhhhhHHHHHhhhhhh
Confidence 368999999999965544
No 134
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=47.11 E-value=1.2e+02 Score=22.56 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804 117 AVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 117 i~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
..-+.++.+++||++++. ...|.++.+.++.++
T Consensus 74 ~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred heeHHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 344567888999999998 888888877776554
No 135
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=43.48 E-value=2.7e+02 Score=25.72 Aligned_cols=18 Identities=17% Similarity=0.215 Sum_probs=7.1
Q ss_pred HHHHHHHhHhHHHHHHHH
Q 018804 251 LWSTIYGGVVVSGLIVFI 268 (350)
Q Consensus 251 ~~~~l~~gi~~~~~~~~~ 268 (350)
++.+...+++...++..+
T Consensus 62 ~~~~~~~~~~~~~~~~~~ 79 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLL 79 (385)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 333333333334444433
No 136
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=41.38 E-value=17 Score=28.55 Aligned_cols=29 Identities=3% Similarity=0.072 Sum_probs=22.0
Q ss_pred hhccCCcchhhhhhhHHHHHHHHHHHHHh
Q 018804 272 CTDKRGPVFATMFNPVSTILVAILAYFVF 300 (350)
Q Consensus 272 a~~~~~~~~~~~~~~~~pv~~~l~~~~~~ 300 (350)
++..-+....+.+.|+.|.+.++++.++.
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667788889999999888877664
No 137
>PRK10666 ammonium transporter; Provisional
Probab=38.75 E-value=3.6e+02 Score=25.76 Aligned_cols=50 Identities=6% Similarity=-0.057 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 018804 185 KGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVI 235 (350)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (350)
...+.+.++++..-......|+..| .+||..........|..-.+...++
T Consensus 305 ~A~iiG~vag~v~~~~~~~l~~~~~-iDD~~~a~~vHgv~Gi~G~l~~glf 354 (428)
T PRK10666 305 GALIIGVVAGLAGLWGVTMLKRWLR-VDDPCDVFGVHGVCGIVGCILTGIF 354 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-CCCCcCccHhhhHhHHHHHHHHHHh
Confidence 3445555555544333323333222 2366666666655555544444443
No 138
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=38.03 E-value=4.8e+02 Score=27.07 Aligned_cols=44 Identities=16% Similarity=0.033 Sum_probs=29.6
Q ss_pred chhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804 106 TFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM 155 (350)
Q Consensus 106 ~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~ 155 (350)
+.+.++..+.|.-.+.++.....+|.+.. .+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 34567788999999988888776665444 555555555565544
No 139
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=36.02 E-value=3.6e+02 Score=25.08 Aligned_cols=21 Identities=10% Similarity=-0.358 Sum_probs=12.6
Q ss_pred HhHhHHHHHHHHHHHhhccCC
Q 018804 257 GGVVVSGLIVFIQLWCTDKRG 277 (350)
Q Consensus 257 ~gi~~~~~~~~~~~~a~~~~~ 277 (350)
+-+....+|..++.-++|+..
T Consensus 112 Mi~~nGilGl~ll~GGlr~~e 132 (366)
T PRK10599 112 MIVTGGLVGFSLLLGGRKFAT 132 (366)
T ss_pred HHHhccHHHHHHHHhccccCe
Confidence 334456667777777766643
No 140
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=35.83 E-value=2.4e+02 Score=22.83 Aligned_cols=67 Identities=15% Similarity=0.269 Sum_probs=42.2
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-----cCchhHHHHHH
Q 018804 147 VSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKR-----YPAQLSLTTWM 221 (350)
Q Consensus 147 l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~ 221 (350)
.++.|+.++... ...+.......++.+++.+++..+.....++| .|.|..-..+.
T Consensus 114 CaVLgvaLln~~--------------------~~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ia 173 (193)
T COG4657 114 CAVLGVALLNIN--------------------EGHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIA 173 (193)
T ss_pred hHHHHHHHHHhh--------------------hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchH
Confidence 467888888653 23344566778888999999888876655554 33444444455
Q ss_pred HHHHHHHHHHHH
Q 018804 222 CFLGAAQSAVFT 233 (350)
Q Consensus 222 ~~~~~i~~~~~~ 233 (350)
++-+++.++.+.
T Consensus 174 litagLmSlaFm 185 (193)
T COG4657 174 LITAGLMSLAFM 185 (193)
T ss_pred HHHHHHHHHHHc
Confidence 555555555443
No 141
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=35.70 E-value=30 Score=25.50 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=32.8
Q ss_pred hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804 112 VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 112 ~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 157 (350)
.....+...+..+++-+.|+++. +++|..++++|+.++..
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 33555666667888899999999 99999999999888864
No 142
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=33.78 E-value=2.8e+02 Score=23.03 Aligned_cols=104 Identities=10% Similarity=0.070 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHh-hccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804 15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYF-LERKIRPKLTLALFLEIFVLSLVGVTLTL 93 (350)
Q Consensus 15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 93 (350)
+.+..-+.+++.|++..+.+.+..+|+=...++. .+.++.....+.+. +.+..+ ..+.. +++.+..... ..+-+
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~GlItlll~a--~vgGfamy~my~y~yr~~ad~-sqr~~-~~K~~lv~~~-sm~lW 175 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGLITLLLTA--VVGGFAMYIMYYYAYRMRADN-SQRPG-TWKYLLVAVL-SMLLW 175 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH--HhhhHHHHHHHHHHHHhhccc-ccCCc-hHHHHHHHHH-HHHHH
Confidence 4455556677788888888876544333332222 22233322222222 222211 11111 2233322222 33345
Q ss_pred HHHHHhhhccCcchhhhhhchhhHHHHHHHHHH
Q 018804 94 NMYFASLRYTSPTFVASVVNTVAAVTFVIAVVL 126 (350)
Q Consensus 94 ~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~ 126 (350)
.+.+.+...+|++.--. +.|+...+++...
T Consensus 176 i~v~i~t~~lPtslN~~---L~pi~l~IiGav~ 205 (226)
T COG4858 176 IAVMIATVFLPTSLNPQ---LPPIALTIIGAVI 205 (226)
T ss_pred HHHHHHHhhCCCcCCcC---CchHHHHHHHHHH
Confidence 55556666777665433 4454444444433
No 143
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=32.91 E-value=3.9e+02 Score=24.46 Aligned_cols=14 Identities=14% Similarity=0.363 Sum_probs=6.1
Q ss_pred HHHHHHHHHHhccc
Q 018804 117 AVTFVIAVVLRLET 130 (350)
Q Consensus 117 i~~~il~~~~~~e~ 130 (350)
+...++.....+|+
T Consensus 168 ~i~~~~~~~~~~~~ 181 (392)
T PRK10473 168 ILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHcCCC
Confidence 33334444445554
No 144
>PRK11715 inner membrane protein; Provisional
Probab=32.05 E-value=4.6e+02 Score=25.08 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=37.4
Q ss_pred HHhccccccccccccchhh--HHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH
Q 018804 125 VLRLETLDLRNARGMAKVL--GTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI 202 (350)
Q Consensus 125 ~~~~e~~~~~~~~~~~~~~--~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v 202 (350)
++-|.|+++. |.+ |+.++++=.++++ .+++...+..+.+.|+.|-.+-..
T Consensus 323 ~~~~~~iHpi------QYlLVGlAl~lFYLLLLS----------------------lSEHigF~~AYliAa~a~v~li~~ 374 (436)
T PRK11715 323 LLKKLRIHPV------QYLLVGLALVLFYLLLLS----------------------LSEHIGFTLAYLIAALACVLLIGF 374 (436)
T ss_pred HhcCceecHH------HHHHHHHHHHHHHHHHHH----------------------HHhhhchHHHHHHHHHHHHHHHHH
Confidence 4456788887 754 4444444444443 334445666777888888887777
Q ss_pred HHHHHhhhc
Q 018804 203 MQAITLKRY 211 (350)
Q Consensus 203 ~~~~~~~~~ 211 (350)
+.....++.
T Consensus 375 Y~~~vl~~~ 383 (436)
T PRK11715 375 YLSAVLRSW 383 (436)
T ss_pred HHHHHHhcc
Confidence 777777664
No 145
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=30.86 E-value=41 Score=28.43 Aligned_cols=45 Identities=11% Similarity=0.270 Sum_probs=27.8
Q ss_pred chhhhhhhHHHHHHHHHHHHHhccccc-hhhhhh-hHHHhhhheeee
Q 018804 279 VFATMFNPVSTILVAILAYFVFGEKLF-LGSIVG-AVVVIGGLYLLL 323 (350)
Q Consensus 279 ~~~~~~~~~~pv~~~l~~~~~~~e~~t-~~~~iG-~~li~~g~~l~~ 323 (350)
...+.+....|..+..++..+-+-.+. ..+++| .+++..|..+..
T Consensus 34 l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 34 LIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 455566667777777777665544333 456666 445567877664
No 146
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=29.56 E-value=1e+02 Score=23.07 Aligned_cols=17 Identities=12% Similarity=0.378 Sum_probs=14.4
Q ss_pred hhhHHHHHHHHHHHHhh
Q 018804 141 KVLGTLVSLAGVTIMTV 157 (350)
Q Consensus 141 ~~~~~~l~~~Gv~l~~~ 157 (350)
+-.++.+.++|+.++..
T Consensus 12 R~~al~lif~g~~vmy~ 28 (114)
T PF11023_consen 12 RTFALSLIFIGMIVMYI 28 (114)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88899999999888853
No 147
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=28.83 E-value=1.6e+02 Score=18.81 Aligned_cols=45 Identities=20% Similarity=0.351 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018804 141 KVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKR 210 (350)
Q Consensus 141 ~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 210 (350)
..+|..+.++|++++..+ + .|.+..+++-...+...-..|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~lP-G------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLP-G------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcCC-C------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 678889999999888653 2 36666666667777777666665543
No 148
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=28.43 E-value=20 Score=27.24 Aligned_cols=23 Identities=22% Similarity=0.140 Sum_probs=11.1
Q ss_pred ccccchhhh----hhhHHHhhhheeee
Q 018804 301 GEKLFLGSI----VGAVVVIGGLYLLL 323 (350)
Q Consensus 301 ~e~~t~~~~----iG~~li~~g~~l~~ 323 (350)
-|.+|++.+ +.++++++|++++.
T Consensus 29 ~ED~tpWNysiL~Ls~vvlvi~~~LLg 55 (125)
T PF15048_consen 29 VEDATPWNYSILALSFVVLVISFFLLG 55 (125)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 466665443 23334445555543
No 149
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=27.95 E-value=5.4e+02 Score=24.59 Aligned_cols=22 Identities=14% Similarity=0.326 Sum_probs=16.4
Q ss_pred hhhhhhhHHHhhhheeeeeccc
Q 018804 306 LGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 306 ~~~~iG~~li~~g~~l~~~~~~ 327 (350)
....+|.++.+.|+.++.+.++
T Consensus 411 ~~~~~~~~~~~~g~~~y~~~~~ 432 (468)
T TIGR03810 411 KYLLLSAILYAPGIYFYARARK 432 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888999888865444
No 150
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=27.49 E-value=27 Score=26.71 Aligned_cols=9 Identities=22% Similarity=0.183 Sum_probs=3.8
Q ss_pred hhhHHHhhh
Q 018804 310 VGAVVVIGG 318 (350)
Q Consensus 310 iG~~li~~g 318 (350)
+|++++++.
T Consensus 75 aGvIg~Ill 83 (122)
T PF01102_consen 75 AGVIGIILL 83 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 151
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=26.79 E-value=3.7e+02 Score=22.31 Aligned_cols=72 Identities=18% Similarity=0.387 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC-----cc----hhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHH
Q 018804 78 FLEIFVLSLVGVTLTLNMYFASLRYTS-----PT----FVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVS 148 (350)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~al~~~~-----~~----~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~ 148 (350)
...+++.|+.|-...+.+|++.+++-. ++ ......++.-.+.+.++-.++...+|+ ++-.+.+.
T Consensus 127 lItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~-------~L~pi~l~ 199 (226)
T COG4858 127 LITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP-------QLPPIALT 199 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc-------CCchHHHH
Confidence 455666777766667778888877665 11 111111111222222344456667766 66777777
Q ss_pred HHHHHHHh
Q 018804 149 LAGVTIMT 156 (350)
Q Consensus 149 ~~Gv~l~~ 156 (350)
++|.+.+.
T Consensus 200 IiGav~la 207 (226)
T COG4858 200 IIGAVILA 207 (226)
T ss_pred HHHHHHHH
Confidence 77777664
No 152
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=24.57 E-value=40 Score=25.75 Aligned_cols=17 Identities=24% Similarity=0.301 Sum_probs=10.9
Q ss_pred HHHHHHhHhHHHHHHHH
Q 018804 252 WSTIYGGVVVSGLIVFI 268 (350)
Q Consensus 252 ~~~l~~gi~~~~~~~~~ 268 (350)
..+++.|++.++++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 44556677777777755
No 153
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=24.34 E-value=3.8e+02 Score=21.54 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC--chhHHH
Q 018804 141 KVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP--AQLSLT 218 (350)
Q Consensus 141 ~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~ 218 (350)
.-.+++.++.|.=++...+--+.. ....++..|..+.+.+.+..+......-.+.++.- ...+.+
T Consensus 91 ~slAVV~AIFGLElLmvSQvcEd~-------------~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~GFTL~ 157 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVCEDA-------------HSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLIGFTLM 157 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcc-------------hhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhhhhHHH
Confidence 456677778887776654321110 34567788988888877766655544444455431 334555
Q ss_pred HHHHHHH
Q 018804 219 TWMCFLG 225 (350)
Q Consensus 219 ~~~~~~~ 225 (350)
+|.-+.+
T Consensus 158 fWCeFtA 164 (184)
T PF15108_consen 158 FWCEFTA 164 (184)
T ss_pred HHHHHHH
Confidence 5554443
No 154
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.33 E-value=1.3e+02 Score=20.78 Aligned_cols=42 Identities=17% Similarity=0.084 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804 285 NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 285 ~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
..+.-+++.+.|++.=+-..+...+.+..++.+-+++-.|.-
T Consensus 17 l~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~ 58 (76)
T PF06645_consen 17 LIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHh
Confidence 334445555556554444445555555555455555555543
No 155
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=24.01 E-value=5.4e+02 Score=23.22 Aligned_cols=25 Identities=12% Similarity=0.166 Sum_probs=19.3
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhc
Q 018804 277 GPVFATMFNPVSTILVAILAYFVFG 301 (350)
Q Consensus 277 ~~~~~~~~~~~~pv~~~l~~~~~~~ 301 (350)
.-.+.++++....+..++.-..+++
T Consensus 375 EearstimNfFRvPLnifvClvLyn 399 (454)
T KOG4332|consen 375 EEARSTIMNFFRVPLNIFVCLVLYN 399 (454)
T ss_pred HHHHhhhhhheechhhHhhhhhhee
Confidence 3467888999998888887777665
No 156
>PRK02935 hypothetical protein; Provisional
Probab=23.64 E-value=1.5e+02 Score=21.88 Aligned_cols=22 Identities=9% Similarity=0.258 Sum_probs=16.2
Q ss_pred cccccccccccchhhHHHHHHHHHHHHh
Q 018804 129 ETLDLRNARGMAKVLGTLVSLAGVTIMT 156 (350)
Q Consensus 129 e~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 156 (350)
.++|+. +-.+..+.++|..++-
T Consensus 7 sKINki------Rt~aL~lvfiG~~vMy 28 (110)
T PRK02935 7 NKINKI------RTFALSLVFIGFIVMY 28 (110)
T ss_pred hHHHHH------HHHHHHHHHHHHHHHH
Confidence 455555 8888888888888774
No 157
>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function.
Probab=23.60 E-value=5.4e+02 Score=23.09 Aligned_cols=124 Identities=11% Similarity=-0.008 Sum_probs=53.3
Q ss_pred hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHH
Q 018804 112 VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTI 191 (350)
Q Consensus 112 ~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 191 (350)
.++..+++.+-++.++++..+..+-..++-+.|+.+.-.-|.-....+......+.-+....++.+....+...|..+..
T Consensus 80 GY~~a~~T~i~G~~~~~~~~~~~~fVaGhVi~GvGlItaCVaT~AtSStrF~LIP~Ns~~~~~~~p~~afs~~~~~~Lia 159 (347)
T PF10951_consen 80 GYLAAAITIIGGIYIFSSGPNAAYFVAGHVIFGVGLITACVATVATSSTRFTLIPKNSKGTSHEVPKGAFSRGQGNILIA 159 (347)
T ss_pred HHHHHHHHHHHHHHHhcCCCChhhhccCceeechhHHHHHHHHhhhccccEEEeecCCCCCCCCCChhhcchHHHHHHHH
Confidence 34445566666777777666555333444555555555444444322111111111111111222233344455665555
Q ss_pred HHHHHHHHHHHHHHHHhhhcC-chh------HHHHHHHHHHHHHHHHHHHH
Q 018804 192 ASSITWSAMYIMQAITLKRYP-AQL------SLTTWMCFLGAAQSAVFTVI 235 (350)
Q Consensus 192 ~a~~~~a~~~v~~~~~~~~~~-~~~------~~~~~~~~~~~i~~~~~~~~ 235 (350)
...++.-+..+..-.+.++.+ +|. .+....+.++.++.+.....
T Consensus 160 v~~~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~ 210 (347)
T PF10951_consen 160 VPILCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIA 210 (347)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHH
Confidence 555444444443333333211 222 33334445555555555543
No 158
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=23.20 E-value=46 Score=19.86 Aligned_cols=18 Identities=22% Similarity=0.840 Sum_probs=10.4
Q ss_pred hhHHHhhhheeeeecccC
Q 018804 311 GAVVVIGGLYLLLWGKEG 328 (350)
Q Consensus 311 G~~li~~g~~l~~~~~~~ 328 (350)
|.++++.+.+++.+++++
T Consensus 22 ~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 22 GVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred HHHHHHHHHHhheEEecc
Confidence 455566666666555443
No 159
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=23.10 E-value=37 Score=26.33 Aligned_cols=24 Identities=13% Similarity=0.019 Sum_probs=17.0
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHh
Q 018804 277 GPVFATMFNPVSTILVAILAYFVF 300 (350)
Q Consensus 277 ~~~~~~~~~~~~pv~~~l~~~~~~ 300 (350)
.....+.+.|.-|++.++.+.++-
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l~ 89 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVLG 89 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667778888888888876653
No 160
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.02 E-value=3.5e+02 Score=24.98 Aligned_cols=28 Identities=0% Similarity=0.063 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHH
Q 018804 26 YTFLYFITEASFNHGMNPHVYVTYRHIVA 54 (350)
Q Consensus 26 ~~~~~~~~k~~~~~g~~p~~~~~~r~~~~ 54 (350)
|+.+.-..+.+.++ ..-.+.....++++
T Consensus 201 Ws~slY~i~ql~~n-Lq~Iwieyr~yvLg 228 (452)
T KOG3817|consen 201 WSISLYVIKQLADN-LQLIWIEYRDYVLG 228 (452)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 44444444444443 44444443334333
No 161
>PRK10054 putative transporter; Provisional
Probab=22.62 E-value=6.1e+02 Score=23.38 Aligned_cols=15 Identities=7% Similarity=0.042 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHhhhc
Q 018804 197 WSAMYIMQAITLKRY 211 (350)
Q Consensus 197 ~a~~~v~~~~~~~~~ 211 (350)
..+......+..++.
T Consensus 56 ~~~~~~~~G~l~Dr~ 70 (395)
T PRK10054 56 GVVFSLGFGILADKF 70 (395)
T ss_pred HHHHHHHHHHHHhhc
Confidence 333344444555554
No 162
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=22.48 E-value=6.9e+02 Score=23.91 Aligned_cols=41 Identities=5% Similarity=0.260 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHH-hccccchhhhhhhHHHhhhheeeeeccc
Q 018804 286 PVSTILVAILAYFV-FGEKLFLGSIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 286 ~~~pv~~~l~~~~~-~~e~~t~~~~iG~~li~~g~~l~~~~~~ 327 (350)
..-++++.++..+. +... ......|.++++.|+.++.+.++
T Consensus 396 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~y~~~~~ 437 (473)
T TIGR00905 396 LIVGVIACVYSIWLLYAAG-LKYLLLGFILYAPGIIFYGRARK 437 (473)
T ss_pred HHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444333 3332 23455688888889777665443
No 163
>PRK11469 hypothetical protein; Provisional
Probab=21.78 E-value=59 Score=27.02 Aligned_cols=44 Identities=7% Similarity=0.034 Sum_probs=28.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHH-Hhhhheeee
Q 018804 280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVV-VIGGLYLLL 323 (350)
Q Consensus 280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~l-i~~g~~l~~ 323 (350)
..+..+...|..+...+..+-+-.+...+|+|..+ +..|..++.
T Consensus 42 ~~g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 42 IFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677788888787766555555667777554 456777665
No 164
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=21.45 E-value=8.9e+02 Score=24.79 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=45.4
Q ss_pred HHHHHHhhhCC-CCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCcch
Q 018804 30 YFITEASFNHG-MNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLV-GVTLTLNMYFASLRYTSPTF 107 (350)
Q Consensus 30 ~~~~k~~~~~g-~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~al~~~~~~~ 107 (350)
..+.|++.|+| ++|..=+..-...+..+...=.+.+ || +.+.....+.-|.+ ...+....-+.-++..|+..
T Consensus 19 ~fl~kya~~~g~l~p~~Rv~~g~~~g~~l~~~g~~l~-~k-----~~~~~~~~L~g~G~a~ly~t~~aa~~~y~l~~~~~ 92 (745)
T PF10101_consen 19 VFLLKYAIDAGWLGPAVRVALGAALGLALLAAGERLR-RK-----GYRAFAQALAGGGIAVLYLTVFAAYHLYGLIPPPV 92 (745)
T ss_pred HHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHHHH-Hc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 45678888864 6675555444444444433332222 22 22233443333333 22222222333345567777
Q ss_pred hhhhhchhhHHHHHHHHHH
Q 018804 108 VASVVNTVAAVTFVIAVVL 126 (350)
Q Consensus 108 ~~~i~~~~pi~~~il~~~~ 126 (350)
+-+........++.++...
T Consensus 93 af~~~~~v~~~~~~la~r~ 111 (745)
T PF10101_consen 93 AFALLALVTAAAVALALRY 111 (745)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 7777666666666666644
No 165
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=21.13 E-value=4.9e+02 Score=21.63 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=38.9
Q ss_pred hhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhH
Q 018804 107 FVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKG 186 (350)
Q Consensus 107 ~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 186 (350)
..+++.+..-....+.-.+..||+++. -+.|.+-..++..+... .| +..+-+..|
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~-------a~~gl~gV~i~a~~A~~-tG-----------------~A~~~Fl~g 82 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQP-------ALSGLFGVAISAAIAWR-TG-----------------SAKDFFLPG 82 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHH-------HHHHHHHHHHHHHHHHH-HC-----------------ChhhhhHHH
Confidence 344555555555556666777787754 45555555555444433 22 334455666
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018804 187 SFLTIASSITWSAMYIM 203 (350)
Q Consensus 187 ~~~~l~a~~~~a~~~v~ 203 (350)
+..-...+..+.++.+.
T Consensus 83 i~~n~~~~~~~l~S~lv 99 (187)
T PF11361_consen 83 IWTNAVYAVVFLVSVLV 99 (187)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66655555555555544
No 166
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=20.90 E-value=66 Score=17.88 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=8.8
Q ss_pred chhhhhhhHHHhhhheee
Q 018804 305 FLGSIVGAVVVIGGLYLL 322 (350)
Q Consensus 305 t~~~~iG~~li~~g~~l~ 322 (350)
....++|..++..+.++.
T Consensus 11 ~~~~~~G~~l~~~~~~~~ 28 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLL 28 (34)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 345566664444444333
No 167
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=20.84 E-value=2.5e+02 Score=25.00 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=18.6
Q ss_pred cchhhhhhhHHHhhhheeeeecc
Q 018804 304 LFLGSIVGAVVVIGGLYLLLWGK 326 (350)
Q Consensus 304 ~t~~~~iG~~li~~g~~l~~~~~ 326 (350)
+|..|++...++++|+++..+.+
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~ 268 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAY 268 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999987765433
No 168
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.55 E-value=39 Score=22.61 Aligned_cols=20 Identities=25% Similarity=0.114 Sum_probs=13.5
Q ss_pred hhhhhHHHhhhheeeeeccc
Q 018804 308 SIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 308 ~~iG~~li~~g~~l~~~~~~ 327 (350)
-++++++++.|.+++....+
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 35677788888777764443
No 169
>PHA03049 IMV membrane protein; Provisional
Probab=20.15 E-value=38 Score=22.54 Aligned_cols=20 Identities=30% Similarity=0.150 Sum_probs=12.5
Q ss_pred hhhhhHHHhhhheeeeeccc
Q 018804 308 SIVGAVVVIGGLYLLLWGKE 327 (350)
Q Consensus 308 ~~iG~~li~~g~~l~~~~~~ 327 (350)
-++++++++.|.+++...++
T Consensus 6 ~l~iICVaIi~lIvYgiYnk 25 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNK 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 34567777778777654443
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=20.01 E-value=6.2e+02 Score=22.45 Aligned_cols=16 Identities=6% Similarity=0.050 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHhhhc
Q 018804 196 TWSAMYIMQAITLKRY 211 (350)
Q Consensus 196 ~~a~~~v~~~~~~~~~ 211 (350)
.+.+......+..++.
T Consensus 42 ~~~~~~~~~g~l~dr~ 57 (379)
T TIGR00881 42 AYGISKFVMGSVSDRS 57 (379)
T ss_pred HHHhhhhhhhHHHHhh
Confidence 3333334444444444
Done!