Query 018806
Match_columns 350
No_of_seqs 464 out of 3556
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 06:20:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018806.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018806hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.7E-32 9.3E-37 238.6 27.5 201 101-326 18-226 (345)
2 3ow8_A WD repeat-containing pr 100.0 1E-32 3.5E-37 238.7 24.3 240 100-345 33-299 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 4.1E-32 1.4E-36 237.0 26.0 240 100-345 56-321 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 3.2E-32 1.1E-36 234.0 24.8 193 101-322 57-256 (304)
5 4gqb_B Methylosome protein 50; 100.0 7.9E-32 2.7E-36 235.1 27.5 202 99-328 127-332 (344)
6 1vyh_C Platelet-activating fac 100.0 1.3E-31 4.4E-36 239.8 27.3 241 98-345 107-389 (410)
7 1vyh_C Platelet-activating fac 100.0 1.5E-31 5E-36 239.4 26.7 243 74-322 101-408 (410)
8 3ow8_A WD repeat-containing pr 100.0 2.4E-31 8.3E-36 230.1 26.2 192 101-322 124-318 (321)
9 4gqb_B Methylosome protein 50; 100.0 1.1E-30 3.6E-35 228.0 27.3 218 99-346 82-309 (344)
10 2ynn_A Coatomer subunit beta'; 100.0 9E-31 3.1E-35 224.9 24.6 214 101-345 15-237 (304)
11 2pm7_B Protein transport prote 100.0 2.5E-30 8.4E-35 221.4 27.1 199 100-324 10-237 (297)
12 3frx_A Guanine nucleotide-bind 100.0 3.4E-30 1.2E-34 222.8 26.9 193 100-323 66-265 (319)
13 2xzm_R RACK1; ribosome, transl 100.0 2.3E-30 7.7E-35 226.2 25.2 196 102-325 24-242 (343)
14 2hes_X YDR267CP; beta-propelle 100.0 3.7E-30 1.3E-34 223.6 25.9 203 101-325 16-230 (330)
15 1nr0_A Actin interacting prote 100.0 2.9E-30 9.9E-35 242.5 27.1 225 99-327 59-355 (611)
16 4g56_B MGC81050 protein; prote 100.0 5.5E-30 1.9E-34 224.9 26.7 197 99-323 139-341 (357)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-30 2.5E-34 223.1 27.1 223 99-346 61-313 (345)
18 1got_B GT-beta; complex (GTP-b 100.0 4.1E-29 1.4E-33 218.0 31.2 244 74-321 48-339 (340)
19 3iz6_a 40S ribosomal protein R 100.0 1.8E-30 6.2E-35 230.0 22.4 241 99-345 66-353 (380)
20 3bg1_A Protein SEC13 homolog; 100.0 4.5E-30 1.6E-34 221.7 23.9 221 101-324 15-292 (316)
21 2pbi_B Guanine nucleotide-bind 100.0 2.9E-30 9.8E-35 226.5 22.9 243 74-345 57-335 (354)
22 1erj_A Transcriptional repress 100.0 3E-30 1E-34 229.7 23.1 212 101-344 125-360 (393)
23 4ery_A WD repeat-containing pr 100.0 9.6E-30 3.3E-34 219.2 25.2 196 100-326 24-222 (312)
24 4aow_A Guanine nucleotide-bind 100.0 7.6E-29 2.6E-33 215.7 30.4 232 72-324 29-336 (340)
25 2xzm_R RACK1; ribosome, transl 100.0 5.2E-29 1.8E-33 217.6 29.1 197 99-323 76-283 (343)
26 4e54_B DNA damage-binding prot 100.0 3.5E-30 1.2E-34 232.2 22.2 201 100-326 120-328 (435)
27 2pbi_B Guanine nucleotide-bind 100.0 7.6E-29 2.6E-33 217.4 29.2 193 99-321 154-353 (354)
28 2ymu_A WD-40 repeat protein; u 100.0 3E-29 1E-33 233.9 27.5 240 74-321 296-576 (577)
29 3frx_A Guanine nucleotide-bind 100.0 7.1E-29 2.4E-33 214.5 27.7 198 102-327 20-227 (319)
30 4g56_B MGC81050 protein; prote 100.0 1.3E-29 4.3E-34 222.6 22.4 225 96-345 39-278 (357)
31 3dwl_C Actin-related protein 2 100.0 3.8E-30 1.3E-34 227.4 18.3 222 99-345 11-260 (377)
32 2pm7_B Protein transport prote 100.0 1.1E-28 3.7E-33 211.2 26.5 199 100-324 54-284 (297)
33 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-28 4.1E-33 214.5 26.7 207 100-324 12-336 (351)
34 1erj_A Transcriptional repress 100.0 1.3E-28 4.5E-33 219.0 26.9 197 98-324 63-286 (393)
35 2ymu_A WD-40 repeat protein; u 100.0 1.2E-28 4.1E-33 229.9 27.7 237 100-345 304-558 (577)
36 4h5i_A Guanine nucleotide-exch 100.0 1.2E-28 3.9E-33 217.1 25.0 197 100-326 134-342 (365)
37 1nr0_A Actin interacting prote 100.0 4.1E-28 1.4E-32 227.9 29.9 218 99-322 18-267 (611)
38 3jrp_A Fusion protein of prote 100.0 2.6E-28 9E-33 215.2 27.0 199 101-325 13-240 (379)
39 2hes_X YDR267CP; beta-propelle 100.0 4.7E-28 1.6E-32 210.3 26.7 203 98-324 57-279 (330)
40 1gxr_A ESG1, transducin-like e 100.0 2.3E-27 8E-32 205.8 30.1 218 98-344 96-314 (337)
41 3ei3_B DNA damage-binding prot 100.0 7.1E-28 2.4E-32 213.4 27.0 210 99-335 73-292 (383)
42 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-27 5E-32 210.2 28.8 225 98-325 7-274 (372)
43 3zwl_B Eukaryotic translation 100.0 3E-27 1E-31 207.6 30.8 239 101-345 34-324 (369)
44 3dm0_A Maltose-binding peripla 100.0 9.5E-28 3.3E-32 228.8 26.2 222 74-322 375-629 (694)
45 1gxr_A ESG1, transducin-like e 100.0 6.1E-27 2.1E-31 203.2 28.9 194 100-324 142-336 (337)
46 3dwl_C Actin-related protein 2 100.0 2.1E-28 7.1E-33 216.3 19.8 200 99-322 55-278 (377)
47 3zwl_B Eukaryotic translation 100.0 5.5E-27 1.9E-31 205.9 28.7 219 99-323 74-344 (369)
48 3iz6_a 40S ribosomal protein R 100.0 1.2E-27 4E-32 212.0 24.3 195 100-322 158-372 (380)
49 2aq5_A Coronin-1A; WD40 repeat 100.0 5.5E-27 1.9E-31 209.2 28.6 220 98-345 80-322 (402)
50 4ery_A WD repeat-containing pr 100.0 4.1E-27 1.4E-31 202.7 26.2 216 99-345 65-288 (312)
51 3dw8_B Serine/threonine-protei 100.0 7.4E-27 2.5E-31 210.9 26.5 235 96-336 25-327 (447)
52 3jro_A Fusion protein of prote 100.0 4.4E-27 1.5E-31 225.8 25.5 219 101-345 11-263 (753)
53 3dm0_A Maltose-binding peripla 100.0 1.3E-26 4.5E-31 220.9 28.3 200 97-323 380-590 (694)
54 2pm9_A Protein WEB1, protein t 100.0 1.5E-26 5.3E-31 206.8 26.7 228 98-327 66-337 (416)
55 3mmy_A MRNA export factor; mRN 100.0 9E-27 3.1E-31 204.5 24.1 188 100-316 40-336 (368)
56 4gq1_A NUP37; propeller, trans 100.0 2E-27 6.7E-32 211.4 19.7 217 99-321 136-385 (393)
57 4ggc_A P55CDC, cell division c 100.0 9.5E-26 3.3E-30 194.2 29.4 220 101-328 27-316 (318)
58 1r5m_A SIR4-interacting protei 100.0 1.1E-26 3.7E-31 207.9 23.8 219 99-324 108-360 (425)
59 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-27 1.3E-31 215.9 21.1 189 99-314 207-416 (524)
60 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-26 4.6E-31 208.5 23.7 215 76-322 47-294 (588)
61 3vl1_A 26S proteasome regulato 100.0 8.1E-27 2.8E-31 209.0 22.4 195 102-327 100-322 (420)
62 4a11_B DNA excision repair pro 100.0 1.1E-25 3.7E-30 200.5 29.3 228 98-327 42-367 (408)
63 3jrp_A Fusion protein of prote 100.0 4.7E-26 1.6E-30 200.8 26.7 201 99-325 55-287 (379)
64 4gga_A P55CDC, cell division c 100.0 7.1E-26 2.4E-30 203.2 27.8 223 99-329 147-397 (420)
65 3i2n_A WD repeat-containing pr 100.0 4.7E-26 1.6E-30 199.3 25.6 223 100-325 19-291 (357)
66 4aez_A CDC20, WD repeat-contai 100.0 1.5E-25 5E-30 199.9 29.1 222 99-328 134-381 (401)
67 2j04_A TAU60, YPL007P, hypothe 100.0 8.4E-27 2.9E-31 209.8 20.8 208 100-344 16-273 (588)
68 1sq9_A Antiviral protein SKI8; 100.0 4E-26 1.4E-30 202.9 24.9 223 99-327 16-322 (397)
69 3odt_A Protein DOA1; ubiquitin 100.0 4.3E-26 1.5E-30 195.8 24.2 217 99-323 59-294 (313)
70 1sq9_A Antiviral protein SKI8; 99.9 2.3E-25 7.9E-30 198.0 29.5 220 99-323 62-393 (397)
71 3mkq_A Coatomer beta'-subunit; 99.9 2.1E-26 7.1E-31 223.3 24.6 219 100-326 14-258 (814)
72 3i2n_A WD repeat-containing pr 99.9 1.5E-26 5.2E-31 202.4 21.3 223 99-326 65-352 (357)
73 1yfq_A Cell cycle arrest prote 99.9 2.6E-26 8.9E-31 199.9 22.4 197 99-326 11-226 (342)
74 2xyi_A Probable histone-bindin 99.9 6.2E-26 2.1E-30 204.2 25.1 206 99-325 128-353 (430)
75 3gre_A Serine/threonine-protei 99.9 4.7E-27 1.6E-31 211.8 17.6 207 100-326 64-291 (437)
76 2w18_A PALB2, fancn, partner a 99.9 5.4E-26 1.8E-30 192.6 21.8 221 72-322 77-354 (356)
77 3vl1_A 26S proteasome regulato 99.9 3.3E-25 1.1E-29 198.5 27.6 222 98-325 138-417 (420)
78 1k8k_C P40, ARP2/3 complex 41 99.9 9.9E-26 3.4E-30 198.4 23.7 222 98-325 51-359 (372)
79 3odt_A Protein DOA1; ubiquitin 99.9 1E-25 3.5E-30 193.4 22.6 234 101-344 20-274 (313)
80 3ei3_B DNA damage-binding prot 99.9 9.3E-26 3.2E-30 199.8 22.4 159 99-288 118-285 (383)
81 2pm9_A Protein WEB1, protein t 99.9 3.4E-26 1.2E-30 204.6 19.6 222 101-346 14-272 (416)
82 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.8E-25 1.6E-29 199.6 27.1 203 99-325 102-337 (450)
83 3lrv_A PRE-mRNA-splicing facto 99.9 1.8E-25 6E-30 195.2 23.0 197 100-326 77-291 (343)
84 4aez_A CDC20, WD repeat-contai 99.9 6E-25 2.1E-29 195.9 26.3 238 101-345 95-358 (401)
85 3k26_A Polycomb protein EED; W 99.9 6.1E-26 2.1E-30 199.1 19.5 217 99-345 69-344 (366)
86 2j04_B YDR362CP, TAU91; beta p 99.9 3.7E-26 1.3E-30 209.3 18.4 229 99-345 133-406 (524)
87 3dw8_B Serine/threonine-protei 99.9 3.3E-25 1.1E-29 200.0 24.0 207 98-322 176-443 (447)
88 2oaj_A Protein SNI1; WD40 repe 99.9 2.5E-25 8.6E-30 216.9 24.7 189 100-322 18-239 (902)
89 4gga_A P55CDC, cell division c 99.9 1.3E-24 4.4E-29 195.0 27.1 240 99-345 105-373 (420)
90 3k26_A Polycomb protein EED; W 99.9 4.8E-25 1.6E-29 193.4 23.4 197 99-327 18-260 (366)
91 1r5m_A SIR4-interacting protei 99.9 5.8E-25 2E-29 196.7 24.1 216 99-322 149-422 (425)
92 2xyi_A Probable histone-bindin 99.9 1.5E-24 5E-29 195.2 26.7 203 99-326 181-409 (430)
93 3sfz_A APAF-1, apoptotic pepti 99.9 5E-25 1.7E-29 222.9 24.8 217 98-345 614-891 (1249)
94 4e54_B DNA damage-binding prot 99.9 1.4E-25 4.7E-30 202.2 18.3 221 75-325 158-428 (435)
95 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-24 4.4E-29 193.8 24.3 207 101-327 36-254 (402)
96 1yfq_A Cell cycle arrest prote 99.9 9.1E-25 3.1E-29 190.1 22.2 216 99-341 56-299 (342)
97 3v7d_B Cell division control p 99.9 3.8E-24 1.3E-28 194.3 26.8 236 99-344 162-441 (464)
98 1pgu_A Actin interacting prote 99.9 4.8E-24 1.7E-28 200.0 28.2 221 98-326 17-282 (615)
99 3lrv_A PRE-mRNA-splicing facto 99.9 2.5E-25 8.6E-30 194.2 17.9 194 107-328 44-245 (343)
100 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-23 4.1E-28 188.2 28.3 216 100-347 179-408 (415)
101 3mkq_A Coatomer beta'-subunit; 99.9 5.5E-24 1.9E-28 206.3 27.3 218 99-320 55-297 (814)
102 3jro_A Fusion protein of prote 99.9 1.3E-24 4.6E-29 208.6 21.9 200 99-324 53-284 (753)
103 3sfz_A APAF-1, apoptotic pepti 99.9 4.5E-24 1.5E-28 215.9 26.2 218 75-322 609-910 (1249)
104 3vu4_A KMHSV2; beta-propeller 99.9 5.9E-24 2E-28 186.4 23.1 216 99-326 19-270 (355)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6E-24 2.1E-28 192.3 23.8 198 100-327 5-271 (450)
106 3vu4_A KMHSV2; beta-propeller 99.9 3.3E-23 1.1E-27 181.6 27.3 216 101-326 60-337 (355)
107 3gre_A Serine/threonine-protei 99.9 3.5E-25 1.2E-29 199.6 15.1 200 99-327 111-359 (437)
108 3v7d_B Cell division control p 99.9 7.2E-24 2.4E-28 192.5 23.4 207 102-344 125-360 (464)
109 4h5i_A Guanine nucleotide-exch 99.9 4.3E-24 1.5E-28 187.9 21.2 162 99-286 176-344 (365)
110 1pgu_A Actin interacting prote 99.9 1.3E-23 4.5E-28 197.0 23.0 237 99-343 63-346 (615)
111 3f3f_A Nucleoporin SEH1; struc 99.9 4.2E-23 1.4E-27 179.3 23.1 188 99-288 57-340 (351)
112 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-23 7.4E-28 203.3 23.2 195 99-315 58-296 (902)
113 3bg1_A Protein SEC13 homolog; 99.9 7.8E-23 2.7E-27 176.3 23.3 182 100-284 58-292 (316)
114 4gq1_A NUP37; propeller, trans 99.9 1.4E-23 4.9E-28 186.5 18.7 219 101-346 91-369 (393)
115 1p22_A F-BOX/WD-repeat protein 99.9 1.7E-22 5.8E-27 182.0 25.9 229 100-344 134-393 (435)
116 1l0q_A Surface layer protein; 99.9 4.2E-22 1.4E-26 176.7 26.4 195 101-327 33-233 (391)
117 3bws_A Protein LP49; two-domai 99.9 1.7E-21 5.8E-26 175.1 28.5 220 100-326 170-431 (433)
118 1l0q_A Surface layer protein; 99.9 1.6E-21 5.5E-26 172.9 27.9 196 101-327 75-275 (391)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1E-21 3.5E-26 177.4 23.4 173 102-314 122-296 (445)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.9 5.2E-21 1.8E-25 172.8 27.7 217 97-327 197-442 (445)
121 4ggc_A P55CDC, cell division c 99.9 4.6E-21 1.6E-25 164.8 24.6 185 99-287 67-317 (318)
122 2w18_A PALB2, fancn, partner a 99.9 7.5E-22 2.6E-26 167.3 19.0 181 77-283 152-355 (356)
123 3bws_A Protein LP49; two-domai 99.9 2.3E-21 7.7E-26 174.3 22.4 199 100-327 123-334 (433)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.2E-21 3.1E-25 169.5 26.0 187 111-328 143-345 (415)
125 4aow_A Guanine nucleotide-bind 99.9 5.7E-21 2E-25 165.8 24.1 182 140-322 34-283 (340)
126 1p22_A F-BOX/WD-repeat protein 99.9 2.3E-21 7.9E-26 174.6 21.5 190 100-327 214-414 (435)
127 3mmy_A MRNA export factor; mRN 99.9 2.2E-21 7.5E-26 170.0 20.6 126 137-287 32-162 (368)
128 2ojh_A Uncharacterized protein 99.9 1.6E-20 5.6E-25 159.3 24.8 216 100-345 42-280 (297)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-21 4E-26 176.0 17.8 198 99-314 36-259 (434)
130 4a11_B DNA excision repair pro 99.9 6.8E-21 2.3E-25 169.4 22.2 176 101-290 143-370 (408)
131 3o4h_A Acylamino-acid-releasin 99.9 3.5E-20 1.2E-24 173.0 19.8 194 101-328 23-228 (582)
132 2ecf_A Dipeptidyl peptidase IV 99.8 9.3E-20 3.2E-24 175.0 22.2 197 99-328 36-322 (741)
133 1ri6_A Putative isomerase YBHE 99.8 2.4E-18 8.3E-23 149.3 27.1 202 100-326 38-261 (343)
134 2oit_A Nucleoporin 214KDA; NH2 99.8 2.7E-19 9.4E-24 160.6 20.3 199 99-325 92-331 (434)
135 2ojh_A Uncharacterized protein 99.8 2E-19 6.9E-24 152.5 18.5 189 100-316 85-292 (297)
136 3hfq_A Uncharacterized protein 99.8 4.4E-18 1.5E-22 148.3 27.1 203 100-326 86-316 (347)
137 3u4y_A Uncharacterized protein 99.8 2.3E-18 7.7E-23 149.0 23.9 196 101-327 42-252 (331)
138 1ri6_A Putative isomerase YBHE 99.8 5.9E-18 2E-22 146.8 25.7 204 101-325 85-306 (343)
139 2ecf_A Dipeptidyl peptidase IV 99.8 3.7E-19 1.3E-23 170.8 18.5 214 101-328 110-370 (741)
140 1xfd_A DIP, dipeptidyl aminope 99.8 2E-19 6.9E-24 172.1 16.6 197 102-328 19-290 (723)
141 3u4y_A Uncharacterized protein 99.8 6.8E-18 2.3E-22 146.0 23.8 202 102-329 86-306 (331)
142 1nir_A Nitrite reductase; hemo 99.8 2.9E-18 9.9E-23 158.1 22.2 192 106-328 144-356 (543)
143 3vgz_A Uncharacterized protein 99.8 2.3E-17 7.9E-22 143.8 26.8 187 102-314 143-332 (353)
144 1xfd_A DIP, dipeptidyl aminope 99.8 1.7E-18 5.7E-23 165.8 20.4 212 101-324 62-341 (723)
145 2z3z_A Dipeptidyl aminopeptida 99.8 2.1E-18 7.1E-23 164.7 19.9 210 99-327 81-344 (706)
146 3scy_A Hypothetical bacterial 99.8 7.6E-17 2.6E-21 141.3 28.2 225 99-325 49-335 (361)
147 3vgz_A Uncharacterized protein 99.8 2.2E-17 7.5E-22 143.9 24.7 208 100-328 41-263 (353)
148 1pby_B Quinohemoprotein amine 99.8 2.2E-17 7.6E-22 142.8 24.1 220 102-328 36-311 (337)
149 2z3z_A Dipeptidyl aminopeptida 99.8 3.9E-18 1.3E-22 162.8 21.2 204 100-329 121-393 (706)
150 1nir_A Nitrite reductase; hemo 99.8 2.6E-17 9E-22 151.7 25.2 210 100-327 179-402 (543)
151 1k32_A Tricorn protease; prote 99.8 8.9E-18 3.1E-22 166.9 22.0 181 101-315 297-491 (1045)
152 3hfq_A Uncharacterized protein 99.8 3E-17 1E-21 143.0 21.4 209 101-326 41-270 (347)
153 1k32_A Tricorn protease; prote 99.8 1.2E-17 4E-22 166.1 21.1 194 101-327 246-461 (1045)
154 1z68_A Fibroblast activation p 99.8 2.4E-18 8.2E-23 164.6 15.4 188 104-324 20-284 (719)
155 1z68_A Fibroblast activation p 99.8 5.2E-18 1.8E-22 162.3 16.9 206 101-327 61-346 (719)
156 1jmx_B Amine dehydrogenase; ox 99.8 1.8E-16 6.2E-21 137.8 22.1 194 101-327 44-325 (349)
157 4a5s_A Dipeptidyl peptidase 4 99.8 1.1E-16 3.8E-21 153.5 22.2 206 102-329 64-355 (740)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.4E-16 8.4E-21 138.4 22.0 203 101-326 41-290 (365)
159 4a5s_A Dipeptidyl peptidase 4 99.7 4.3E-17 1.5E-21 156.4 18.3 194 102-329 19-296 (740)
160 3o4h_A Acylamino-acid-releasin 99.7 4E-17 1.4E-21 152.3 17.7 190 101-323 66-274 (582)
161 3pe7_A Oligogalacturonate lyas 99.7 3.2E-16 1.1E-20 138.6 20.5 195 104-328 40-274 (388)
162 1jmx_B Amine dehydrogenase; ox 99.7 5.6E-16 1.9E-20 134.7 21.1 157 104-289 4-179 (349)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 6.9E-16 2.4E-20 135.5 21.1 203 102-327 85-341 (365)
164 1pby_B Quinohemoprotein amine 99.7 1.9E-15 6.4E-20 130.6 23.1 151 112-288 2-166 (337)
165 3scy_A Hypothetical bacterial 99.7 6E-15 2.1E-19 129.2 25.3 183 101-304 156-360 (361)
166 3azo_A Aminopeptidase; POP fam 99.7 3.5E-15 1.2E-19 141.3 20.3 202 101-326 25-273 (662)
167 3azo_A Aminopeptidase; POP fam 99.7 5.1E-15 1.7E-19 140.2 21.2 198 104-327 81-325 (662)
168 3pe7_A Oligogalacturonate lyas 99.7 3.1E-15 1.1E-19 132.2 17.9 222 102-327 83-384 (388)
169 3c5m_A Oligogalacturonate lyas 99.6 7.8E-15 2.7E-19 129.8 17.0 224 104-333 85-390 (396)
170 2xdw_A Prolyl endopeptidase; a 99.6 8.7E-14 3E-18 132.8 23.4 197 101-325 126-366 (710)
171 3c5m_A Oligogalacturonate lyas 99.6 4.4E-15 1.5E-19 131.4 13.2 212 102-327 38-273 (396)
172 2oiz_A Aromatic amine dehydrog 99.6 1.5E-13 5E-18 120.4 21.1 201 104-308 54-360 (361)
173 3fvz_A Peptidyl-glycine alpha- 99.6 9E-13 3.1E-17 113.9 25.4 222 101-327 25-322 (329)
174 3e5z_A Putative gluconolactona 99.6 1.2E-12 4.1E-17 111.2 25.2 217 101-329 29-288 (296)
175 1q7f_A NHL, brain tumor CG1071 99.6 1.5E-12 5.2E-17 110.0 23.9 197 100-327 77-280 (286)
176 2bkl_A Prolyl endopeptidase; m 99.6 4.4E-13 1.5E-17 127.7 22.7 198 100-326 121-350 (695)
177 2gop_A Trilobed protease; beta 99.6 3E-13 1E-17 117.6 19.8 181 100-324 59-290 (347)
178 1xip_A Nucleoporin NUP159; bet 99.6 2.4E-13 8.1E-18 118.6 18.4 173 101-314 39-232 (388)
179 2dg1_A DRP35, lactonase; beta 99.5 9.9E-12 3.4E-16 107.3 26.9 223 101-327 46-316 (333)
180 1q7f_A NHL, brain tumor CG1071 99.5 7.3E-12 2.5E-16 105.8 25.0 192 101-324 31-235 (286)
181 2xdw_A Prolyl endopeptidase; a 99.5 1.2E-11 4E-16 118.1 26.1 203 101-329 172-416 (710)
182 1rwi_B Serine/threonine-protei 99.5 1.1E-11 3.6E-16 103.7 22.3 195 101-327 68-264 (270)
183 2gop_A Trilobed protease; beta 99.5 3.1E-12 1E-16 111.1 18.7 180 102-324 106-330 (347)
184 2dg1_A DRP35, lactonase; beta 99.5 1.3E-12 4.5E-17 112.9 15.5 194 101-326 7-212 (333)
185 1qks_A Cytochrome CD1 nitrite 99.4 3.3E-11 1.1E-15 111.1 24.6 189 109-328 165-374 (567)
186 1yr2_A Prolyl oligopeptidase; 99.4 1.2E-11 4.2E-16 118.5 22.2 197 101-326 164-394 (741)
187 2bkl_A Prolyl endopeptidase; m 99.4 8.3E-12 2.9E-16 118.8 19.5 191 108-327 76-304 (695)
188 2oiz_A Aromatic amine dehydrog 99.4 2.8E-11 9.5E-16 105.9 21.3 66 260-328 259-335 (361)
189 3dsm_A Uncharacterized protein 99.4 7.7E-11 2.6E-15 101.6 23.5 194 100-326 84-301 (328)
190 2mad_H Methylamine dehydrogena 99.4 2.7E-10 9.1E-15 99.9 26.0 221 104-329 70-352 (373)
191 1rwi_B Serine/threonine-protei 99.4 8.9E-11 3E-15 98.0 22.1 195 101-327 25-222 (270)
192 3dsm_A Uncharacterized protein 99.4 8.8E-11 3E-15 101.3 21.7 195 101-328 45-254 (328)
193 3g4e_A Regucalcin; six bladed 99.4 1.7E-10 5.6E-15 98.1 22.7 186 100-315 54-261 (297)
194 1qks_A Cytochrome CD1 nitrite 99.4 1.2E-09 4E-14 100.8 28.2 211 99-327 196-421 (567)
195 1yr2_A Prolyl oligopeptidase; 99.4 5.7E-11 2E-15 113.9 20.2 191 108-327 115-350 (741)
196 3iuj_A Prolyl endopeptidase; h 99.3 8.8E-11 3E-15 111.7 20.9 197 100-326 129-358 (693)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.1E-10 1.4E-14 96.1 22.7 196 100-327 71-299 (314)
198 3no2_A Uncharacterized protein 99.3 1.4E-10 4.6E-15 97.4 19.2 183 110-326 4-194 (276)
199 3no2_A Uncharacterized protein 99.3 8.3E-10 2.8E-14 92.6 22.1 186 101-314 38-231 (276)
200 3c75_H MADH, methylamine dehyd 99.3 1.5E-10 5.1E-15 102.3 17.7 222 104-329 122-404 (426)
201 3sjl_D Methylamine dehydrogena 99.3 4.2E-10 1.4E-14 97.8 19.5 222 104-329 82-365 (386)
202 3hrp_A Uncharacterized protein 99.3 1.3E-09 4.5E-14 96.8 23.0 196 101-326 132-353 (409)
203 2ghs_A AGR_C_1268P; regucalcin 99.3 1.4E-09 4.9E-14 93.6 22.6 184 100-315 90-291 (326)
204 2z2n_A Virginiamycin B lyase; 99.3 5.3E-09 1.8E-13 88.3 25.4 193 100-325 57-253 (299)
205 2z2n_A Virginiamycin B lyase; 99.3 4.7E-09 1.6E-13 88.6 24.6 193 100-325 15-211 (299)
206 3hrp_A Uncharacterized protein 99.2 8.7E-09 3E-13 91.5 26.7 196 105-325 176-408 (409)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.5E-09 1.5E-13 89.6 22.2 199 101-326 19-255 (314)
208 2iwa_A Glutamine cyclotransfer 99.2 2.2E-08 7.6E-13 82.5 23.8 194 102-329 23-239 (266)
209 3e5z_A Putative gluconolactona 99.1 6.1E-09 2.1E-13 88.2 20.1 154 142-326 25-201 (296)
210 3dr2_A Exported gluconolactona 99.1 3.6E-09 1.2E-13 90.1 18.4 182 101-312 46-255 (305)
211 2qc5_A Streptogramin B lactona 99.1 5.7E-08 1.9E-12 82.0 25.5 193 100-325 62-258 (300)
212 3iuj_A Prolyl endopeptidase; h 99.1 7.7E-09 2.6E-13 98.3 22.0 195 103-327 178-405 (693)
213 2ghs_A AGR_C_1268P; regucalcin 99.1 5.8E-08 2E-12 83.5 25.4 192 102-325 51-258 (326)
214 2qc5_A Streptogramin B lactona 99.1 6.4E-08 2.2E-12 81.6 24.9 193 100-325 20-216 (300)
215 3g4e_A Regucalcin; six bladed 99.1 2.9E-08 1E-12 84.1 22.7 194 102-326 15-228 (297)
216 1xip_A Nucleoporin NUP159; bet 99.1 1.1E-09 3.9E-14 95.4 13.9 130 102-272 90-231 (388)
217 3dr2_A Exported gluconolactona 99.1 3.3E-09 1.1E-13 90.4 16.6 189 100-324 86-303 (305)
218 3fvz_A Peptidyl-glycine alpha- 99.1 1.2E-08 4.1E-13 87.9 20.0 112 213-326 91-226 (329)
219 2ece_A 462AA long hypothetical 99.1 1.2E-08 4E-13 89.6 19.5 187 101-314 139-399 (462)
220 2qe8_A Uncharacterized protein 99.1 2.3E-08 7.8E-13 86.6 21.4 205 100-314 67-309 (343)
221 1mda_H Methylamine dehydrogena 99.0 9.2E-09 3.1E-13 89.4 17.0 215 104-329 69-348 (368)
222 3nol_A Glutamine cyclotransfer 99.0 1.7E-07 5.7E-12 76.4 23.2 190 102-327 45-256 (262)
223 2ece_A 462AA long hypothetical 99.0 6.4E-08 2.2E-12 84.9 19.6 193 109-326 93-351 (462)
224 3nok_A Glutaminyl cyclase; bet 99.0 2.9E-07 9.9E-12 75.0 21.6 187 102-325 57-264 (268)
225 3sjl_D Methylamine dehydrogena 99.0 5.5E-08 1.9E-12 84.5 18.6 194 107-328 40-257 (386)
226 1npe_A Nidogen, entactin; glyc 99.0 3.1E-06 1E-10 70.3 28.5 196 101-327 37-238 (267)
227 2qe8_A Uncharacterized protein 98.9 4.6E-08 1.6E-12 84.7 17.6 199 101-325 18-276 (343)
228 2mad_H Methylamine dehydrogena 98.9 5.5E-07 1.9E-11 78.8 24.3 182 101-291 126-356 (373)
229 1npe_A Nidogen, entactin; glyc 98.9 1E-06 3.6E-11 73.2 24.3 190 111-327 1-198 (267)
230 1fwx_A Nitrous oxide reductase 98.9 1.4E-07 4.9E-12 85.6 19.8 209 109-327 99-361 (595)
231 3mbr_X Glutamine cyclotransfer 98.9 4.8E-06 1.7E-10 67.2 25.4 193 101-329 22-237 (243)
232 1fwx_A Nitrous oxide reductase 98.8 3.7E-07 1.3E-11 82.9 18.8 206 99-315 133-407 (595)
233 2xe4_A Oligopeptidase B; hydro 98.8 9.6E-07 3.3E-11 84.6 22.0 194 101-325 175-398 (751)
234 3c75_H MADH, methylamine dehyd 98.7 2.2E-06 7.7E-11 75.7 20.4 183 101-291 178-408 (426)
235 2fp8_A Strictosidine synthase; 98.7 3.2E-06 1.1E-10 72.3 20.7 186 102-313 21-246 (322)
236 2hz6_A Endoplasmic reticulum t 98.7 1.6E-08 5.4E-13 88.6 4.9 145 110-289 8-153 (369)
237 1yiq_A Quinohemoprotein alcoho 98.6 3.9E-06 1.3E-10 79.5 20.1 207 103-313 238-535 (689)
238 3qqz_A Putative uncharacterize 98.6 8.3E-05 2.9E-09 60.8 25.2 201 101-324 28-250 (255)
239 1kb0_A Quinohemoprotein alcoho 98.5 8.3E-06 2.8E-10 77.1 20.1 205 103-313 246-537 (677)
240 1mda_H Methylamine dehydrogena 98.5 1.4E-06 4.7E-11 75.7 13.6 88 218-305 269-366 (368)
241 2fp8_A Strictosidine synthase; 98.5 3.9E-05 1.3E-09 65.5 22.4 194 101-329 81-315 (322)
242 2iwa_A Glutamine cyclotransfer 98.5 1.1E-05 3.8E-10 66.4 17.5 152 146-329 22-183 (266)
243 2p4o_A Hypothetical protein; p 98.5 6.9E-05 2.3E-09 63.5 22.5 194 101-316 73-278 (306)
244 3v64_C Agrin; beta propeller, 98.4 0.00062 2.1E-08 58.8 28.6 193 101-324 74-272 (349)
245 3v64_C Agrin; beta propeller, 98.4 0.00046 1.6E-08 59.6 26.6 195 102-328 36-235 (349)
246 2xe4_A Oligopeptidase B; hydro 98.4 2.8E-05 9.6E-10 74.5 20.7 152 146-326 175-353 (751)
247 3v65_B Low-density lipoprotein 98.4 0.00052 1.8E-08 60.1 27.2 193 101-324 117-315 (386)
248 1ijq_A LDL receptor, low-densi 98.4 0.00064 2.2E-08 57.8 26.9 186 113-328 3-196 (316)
249 1ijq_A LDL receptor, low-densi 98.4 0.00076 2.6E-08 57.3 28.3 198 101-326 31-237 (316)
250 2hz6_A Endoplasmic reticulum t 98.4 1E-07 3.4E-12 83.5 1.9 168 107-309 45-217 (369)
251 3sre_A PON1, serum paraoxonase 98.3 0.00051 1.7E-08 59.1 24.1 191 101-314 51-285 (355)
252 3p5b_L Low density lipoprotein 98.3 0.00099 3.4E-08 58.6 26.6 190 112-328 84-278 (400)
253 3v65_B Low-density lipoprotein 98.3 0.00045 1.5E-08 60.6 23.6 194 103-328 80-278 (386)
254 2p4o_A Hypothetical protein; p 98.3 0.00023 8E-09 60.2 20.6 191 101-325 33-240 (306)
255 3nok_A Glutaminyl cyclase; bet 98.2 0.00013 4.3E-09 59.5 17.5 151 145-328 55-211 (268)
256 3sov_A LRP-6, low-density lipo 98.2 0.0007 2.4E-08 57.6 23.2 188 113-328 6-198 (318)
257 3nol_A Glutamine cyclotransfer 98.2 0.00014 4.8E-09 59.2 17.0 152 145-328 43-202 (262)
258 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0023 7.9E-08 59.7 27.4 189 112-329 7-199 (628)
259 3tc9_A Hypothetical hydrolase; 98.2 0.00046 1.6E-08 61.4 21.8 197 100-325 179-428 (430)
260 3tc9_A Hypothetical hydrolase; 98.1 0.00013 4.4E-09 65.0 17.1 154 146-327 138-301 (430)
261 3p5b_L Low density lipoprotein 98.1 0.0038 1.3E-07 54.9 28.0 198 100-325 112-318 (400)
262 3s25_A Hypothetical 7-bladed b 98.1 0.00048 1.6E-08 58.0 18.9 181 105-329 58-257 (302)
263 3m0c_C LDL receptor, low-densi 98.1 0.0032 1.1E-07 60.2 26.5 198 101-326 425-631 (791)
264 3sov_A LRP-6, low-density lipo 98.1 0.0037 1.3E-07 53.0 26.5 196 101-326 36-237 (318)
265 1k3i_A Galactose oxidase precu 98.1 0.0004 1.4E-08 65.5 19.7 72 103-174 189-273 (656)
266 2p9w_A MAL S 1 allergenic prot 98.1 0.0007 2.4E-08 57.0 18.8 160 144-326 12-214 (334)
267 3hxj_A Pyrrolo-quinoline quino 98.0 0.00018 6.1E-09 61.3 15.6 176 102-317 139-316 (330)
268 3m0c_C LDL receptor, low-densi 98.0 0.0045 1.5E-07 59.3 26.4 190 113-329 397-591 (791)
269 4hw6_A Hypothetical protein, I 98.0 0.0014 4.7E-08 58.4 21.2 196 101-325 183-431 (433)
270 3amr_A 3-phytase; beta-propell 98.0 0.0056 1.9E-07 52.1 24.1 192 110-326 39-262 (355)
271 1flg_A Protein (quinoprotein e 97.9 0.00095 3.2E-08 61.8 19.3 79 235-313 466-546 (582)
272 3mbr_X Glutamine cyclotransfer 97.9 0.0021 7.2E-08 51.8 18.8 152 144-327 20-179 (243)
273 1kb0_A Quinohemoprotein alcoho 97.9 0.00034 1.2E-08 66.1 16.5 105 222-328 322-508 (677)
274 4a0p_A LRP6, LRP-6, low-densit 97.9 0.014 4.9E-07 54.4 29.7 196 101-327 38-237 (628)
275 4a2l_A BT_4663, two-component 97.9 0.019 6.5E-07 55.3 28.5 192 96-314 306-516 (795)
276 3kya_A Putative phosphatase; s 97.9 0.0013 4.5E-08 59.0 18.4 159 146-327 140-341 (496)
277 1kv9_A Type II quinohemoprotei 97.9 0.0012 4.2E-08 62.2 19.1 80 235-314 438-519 (668)
278 2ad6_A Methanol dehydrogenase 97.8 0.0012 4E-08 61.1 17.7 80 235-314 444-525 (571)
279 3s25_A Hypothetical 7-bladed b 97.8 0.0024 8.1E-08 53.8 17.9 177 107-329 21-218 (302)
280 2xbg_A YCF48-like protein; pho 97.8 0.0084 2.9E-07 51.1 21.1 182 101-316 123-313 (327)
281 4hw6_A Hypothetical protein, I 97.7 0.0079 2.7E-07 53.4 21.4 153 101-284 140-303 (433)
282 3s94_A LRP-6, low-density lipo 97.7 0.013 4.3E-07 54.7 23.3 183 118-327 15-202 (619)
283 1n7d_A LDL receptor, low-densi 97.7 0.0005 1.7E-08 65.1 14.1 197 101-325 407-612 (699)
284 3hxj_A Pyrrolo-quinoline quino 97.7 0.0011 3.7E-08 56.3 15.2 174 111-324 107-281 (330)
285 1n7d_A LDL receptor, low-densi 97.7 0.00034 1.1E-08 66.3 12.9 180 119-327 384-571 (699)
286 2p9w_A MAL S 1 allergenic prot 97.7 0.015 5.3E-07 48.9 23.1 196 102-315 15-253 (334)
287 2ism_A Putative oxidoreductase 97.7 0.0071 2.4E-07 52.1 19.7 59 255-314 268-333 (352)
288 3kya_A Putative phosphatase; s 97.7 0.0031 1.1E-07 56.6 17.6 161 101-284 140-340 (496)
289 4a2l_A BT_4663, two-component 97.6 0.049 1.7E-06 52.4 27.5 189 97-313 260-469 (795)
290 1k3i_A Galactose oxidase precu 97.6 0.0034 1.2E-07 59.1 18.0 210 103-315 246-530 (656)
291 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0015 5.2E-08 56.7 14.4 142 112-290 189-342 (376)
292 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0056 1.9E-07 53.1 17.9 146 110-289 52-211 (376)
293 1yiq_A Quinohemoprotein alcoho 97.6 0.0041 1.4E-07 58.9 18.1 171 110-289 120-342 (689)
294 3qqz_A Putative uncharacterize 97.6 0.0074 2.5E-07 49.2 16.9 117 206-324 21-150 (255)
295 3a9g_A Putative uncharacterize 97.6 0.032 1.1E-06 48.0 24.4 59 255-313 259-329 (354)
296 1w6s_A Methanol dehydrogenase 97.5 0.0096 3.3E-07 55.2 18.7 78 235-312 453-532 (599)
297 3v9f_A Two-component system se 97.4 0.06 2E-06 51.7 24.1 187 96-314 309-513 (781)
298 3pbp_A Nucleoporin NUP82; beta 97.4 0.042 1.4E-06 47.9 19.9 109 214-324 67-209 (452)
299 2xbg_A YCF48-like protein; pho 97.3 0.062 2.1E-06 45.6 21.9 183 100-316 36-225 (327)
300 2g8s_A Glucose/sorbosone dehyd 97.3 0.068 2.3E-06 45.9 23.1 69 256-324 272-351 (353)
301 3v9f_A Two-component system se 97.3 0.067 2.3E-06 51.4 22.7 183 98-313 361-556 (781)
302 1cru_A Protein (soluble quinop 97.3 0.021 7.2E-07 51.0 17.8 60 101-163 28-98 (454)
303 2ism_A Putative oxidoreductase 97.3 0.075 2.6E-06 45.7 23.6 150 101-272 32-220 (352)
304 3sre_A PON1, serum paraoxonase 97.3 0.042 1.4E-06 47.2 18.7 111 214-326 113-251 (355)
305 3das_A Putative oxidoreductase 97.2 0.022 7.5E-07 48.7 16.1 155 101-272 33-219 (347)
306 3s94_A LRP-6, low-density lipo 97.2 0.15 5.3E-06 47.4 27.5 189 113-329 319-512 (619)
307 2g8s_A Glucose/sorbosone dehyd 96.8 0.05 1.7E-06 46.8 15.4 148 146-314 19-215 (353)
308 2ad6_A Methanol dehydrogenase 96.8 0.063 2.2E-06 49.5 16.5 174 111-289 115-339 (571)
309 3a9g_A Putative uncharacterize 96.8 0.11 3.6E-06 44.8 17.0 144 145-314 29-215 (354)
310 3pbp_A Nucleoporin NUP82; beta 96.6 0.31 1.1E-05 42.5 21.0 161 108-281 29-208 (452)
311 1kv9_A Type II quinohemoprotei 96.6 0.052 1.8E-06 51.2 15.0 169 111-289 117-337 (668)
312 3amr_A 3-phytase; beta-propell 96.6 0.1 3.4E-06 44.4 14.9 142 155-326 39-209 (355)
313 1cru_A Protein (soluble quinop 96.5 0.21 7E-06 44.6 17.5 109 145-273 27-162 (454)
314 1flg_A Protein (quinoprotein e 96.4 0.076 2.6E-06 49.1 14.5 47 223-270 496-544 (582)
315 1tl2_A L10, protein (tachylect 96.4 0.023 7.9E-07 44.8 9.0 98 214-317 42-155 (236)
316 1tl2_A L10, protein (tachylect 96.4 0.27 9.3E-06 38.8 20.5 149 145-324 41-207 (236)
317 1w6s_A Methanol dehydrogenase 96.1 0.9 3.1E-05 42.0 20.5 30 260-289 246-291 (599)
318 3das_A Putative oxidoreductase 95.4 0.24 8.3E-06 42.2 12.3 101 213-314 32-158 (347)
319 2vpj_A Kelch-like protein 12; 94.5 1.7 5.8E-05 35.9 18.8 88 223-314 159-261 (301)
320 3sbq_A Nitrous-oxide reductase 93.9 0.29 9.9E-06 44.2 9.2 100 214-314 324-453 (638)
321 2xzh_A Clathrin heavy chain 1; 93.7 2.8 9.6E-05 35.3 18.2 169 98-288 150-335 (365)
322 2zwa_A Leucine carboxyl methyl 93.3 2.1 7.1E-05 40.4 14.6 179 110-314 451-673 (695)
323 2vpj_A Kelch-like protein 12; 92.7 3.6 0.00012 33.8 15.3 65 223-289 206-282 (301)
324 2xn4_A Kelch-like protein 2; s 92.4 4 0.00014 33.6 15.5 68 223-290 204-281 (302)
325 2wg3_C Hedgehog-interacting pr 92.1 6.2 0.00021 35.1 20.0 54 102-155 16-79 (463)
326 2uvk_A YJHT; unknown function, 91.9 5.2 0.00018 33.8 14.4 55 236-290 286-347 (357)
327 3ii7_A Kelch-like protein 7; p 91.9 4.6 0.00016 33.3 18.5 89 223-314 149-255 (306)
328 2wg3_C Hedgehog-interacting pr 91.5 4.6 0.00016 36.0 13.7 103 213-316 14-159 (463)
329 2xzh_A Clathrin heavy chain 1; 91.1 6.3 0.00021 33.3 28.7 214 102-327 69-332 (365)
330 1bpo_A Protein (clathrin); cla 90.7 8.3 0.00028 33.9 19.7 168 99-288 150-334 (494)
331 4asc_A Kelch repeat and BTB do 90.4 6.8 0.00023 32.4 15.0 66 223-290 196-282 (315)
332 1zgk_A Kelch-like ECH-associat 90.3 6.9 0.00023 32.3 13.9 66 223-289 215-291 (308)
333 2zwa_A Leucine carboxyl methyl 89.5 11 0.00036 35.6 15.0 66 222-287 499-579 (695)
334 2xn4_A Kelch-like protein 2; s 89.3 8.1 0.00028 31.7 16.3 89 223-314 155-259 (302)
335 3sbq_A Nitrous-oxide reductase 89.2 1.4 4.7E-05 40.0 8.1 108 146-273 324-453 (638)
336 1zgk_A Kelch-like ECH-associat 88.8 8.9 0.0003 31.6 16.0 89 223-314 168-270 (308)
337 1bpo_A Protein (clathrin); cla 88.0 13 0.00046 32.7 27.8 215 102-327 68-331 (494)
338 2woz_A Kelch repeat and BTB do 87.5 11 0.00038 31.2 15.3 67 223-289 206-291 (318)
339 2uvk_A YJHT; unknown function, 87.3 12 0.00042 31.4 17.5 107 223-329 200-344 (357)
340 3ii7_A Kelch-like protein 7; p 86.1 13 0.00044 30.5 17.0 89 223-314 101-208 (306)
341 4asc_A Kelch repeat and BTB do 85.6 14 0.00048 30.5 16.9 90 222-314 147-251 (315)
342 1xi4_A Clathrin heavy chain; a 84.7 39 0.0013 34.8 17.5 179 103-289 69-293 (1630)
343 3zwu_A Alkaline phosphatase PH 82.9 4.3 0.00015 37.3 8.1 58 257-314 478-549 (592)
344 3q6k_A 43.2 kDa salivary prote 82.2 23 0.0008 30.4 18.1 203 101-313 88-341 (381)
345 1xi4_A Clathrin heavy chain; a 81.2 40 0.0014 34.7 14.6 169 99-287 150-333 (1630)
346 4a9v_A PHOX; hydrolase, beta-p 80.8 8.2 0.00028 35.2 9.0 59 256-314 477-549 (592)
347 2be1_A Serine/threonine-protei 78.8 5.9 0.0002 33.5 7.2 62 223-286 110-184 (339)
348 2be1_A Serine/threonine-protei 77.9 9.7 0.00033 32.2 8.2 61 231-292 64-137 (339)
349 3ei3_A DNA damage-binding prot 75.2 73 0.0025 32.1 23.7 100 213-316 514-626 (1158)
350 3zwu_A Alkaline phosphatase PH 74.4 8.4 0.00029 35.4 7.3 63 101-163 477-549 (592)
351 4gq2_M Nucleoporin NUP120; bet 72.1 23 0.0008 34.7 10.4 33 256-288 237-269 (950)
352 3ott_A Two-component system se 72.0 68 0.0023 30.3 22.4 168 98-289 371-549 (758)
353 2woz_A Kelch repeat and BTB do 70.1 44 0.0015 27.4 18.8 91 223-314 109-214 (318)
354 4a9v_A PHOX; hydrolase, beta-p 69.6 28 0.00094 31.8 9.3 61 213-273 476-549 (592)
355 3b7f_A Glycosyl hydrolase, BNR 67.0 59 0.002 27.7 23.5 99 213-313 177-296 (394)
356 4fhn_B Nucleoporin NUP120; pro 60.4 15 0.00053 36.8 6.6 32 257-288 240-271 (1139)
357 3b7f_A Glycosyl hydrolase, BNR 58.2 86 0.003 26.6 23.7 101 214-316 116-253 (394)
358 3ei3_A DNA damage-binding prot 53.8 1.9E+02 0.0064 29.2 25.2 188 99-314 553-755 (1158)
359 4gq2_M Nucleoporin NUP120; bet 50.4 96 0.0033 30.4 10.2 35 101-137 237-271 (950)
360 3ott_A Two-component system se 48.5 1.8E+02 0.0061 27.4 24.1 181 99-313 62-249 (758)
361 4hvt_A Ritya.17583.B, post-pro 44.7 2.1E+02 0.007 27.0 20.3 196 102-326 131-380 (711)
362 4hvt_A Ritya.17583.B, post-pro 42.5 2.2E+02 0.0076 26.8 17.7 91 234-325 319-428 (711)
363 3q6k_A 43.2 kDa salivary prote 42.0 1.6E+02 0.0056 25.1 13.0 90 236-325 124-253 (381)
364 1wp5_A Topoisomerase IV; broke 41.6 1.5E+02 0.0052 24.6 20.5 200 109-326 3-224 (323)
365 3no0_A DNA gyrase subunit A; D 41.5 1.4E+02 0.0048 24.1 21.4 166 99-284 67-245 (276)
366 3f7f_A Nucleoporin NUP120; nuc 40.9 37 0.0013 31.9 5.3 30 257-288 224-253 (729)
367 2lyd_B Pacman protein; DCP1, X 32.8 18 0.00061 18.4 1.1 8 1-8 18-25 (38)
368 4fhn_B Nucleoporin NUP120; pro 30.3 46 0.0016 33.4 4.5 35 214-249 239-273 (1139)
369 3uc1_A DNA gyrase subunit A; D 29.2 2.5E+02 0.0085 23.4 21.6 167 101-284 96-278 (327)
370 3kci_A Probable E3 ubiquitin-p 24.6 3.2E+02 0.011 23.1 19.9 166 99-284 104-292 (389)
371 3f7f_A Nucleoporin NUP120; nuc 23.7 1.8E+02 0.0062 27.4 6.8 28 101-130 223-250 (729)
372 3no0_A DNA gyrase subunit A; D 21.6 3.2E+02 0.011 22.0 22.0 174 70-285 9-196 (276)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-32 Score=238.59 Aligned_cols=201 Identities=18% Similarity=0.357 Sum_probs=167.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|++++|+|+|++||+|+.|++|+||++.............+|...|.+++|+|+++.|++++.|+++++|++...
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~---- 93 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD---- 93 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC----
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC----
Confidence 4899999999999999999999999999642212223344579999999999999999999999999999998732
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce----eeeecCCC
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT----PIRRGFGG 256 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~----~~~~~~~~ 256 (350)
...+...+.+|. ..|.+++|+|++++|++++.| |+|++||++.+... .+..|...
T Consensus 94 -------------------~~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 94 -------------------DFECVTTLEGHE-NEVKSVAWAPSGNLLATCSRD-KSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp --------------------EEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred -------------------CeEEEEEccCCC-CCceEEEEeCCCCEEEEEECC-CeEEEEECCCCCCeEEEEEecCcCCC
Confidence 122345677886 799999999999999999999 69999999876432 24457789
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCCCce---eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeC
Q 018806 257 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~ 326 (350)
|.+++|+|++++|++++.|++|++||.++++. ..+.+|...|++++|+|+|++|++++ ++.+.+|.....
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 99999999999999999999999999988753 35678999999999999999999988 666666665544
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=238.74 Aligned_cols=240 Identities=17% Similarity=0.187 Sum_probs=179.7
Q ss_pred cCeeEEEEecC----CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCC
Q 018806 100 VDLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 100 ~~V~~v~~sp~----g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~ 175 (350)
..|++++|+|+ +++|++|+.|++|+||++....... .....+|...|.+++|++++..+++++.|++|++||+..
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~-~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~ 111 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDL-QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN 111 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeee-eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 34999999885 5799999999999999996422122 222358999999999999988888888899999999986
Q ss_pred CCCCceeecccccccceecCCC----------CCceEEee--------eccCCCCCceeeEEECCCCCeEEEEEeCCCeE
Q 018806 176 PGNAASVRSGAASFLGALSRGP----------GTRWTLVD--------FLRSQNGEQITALSWGPDGRYLASASYESSSF 237 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i 237 (350)
......+... ......+.+.+ ++.+.+++ .+..+. ..+.+++|+|+|++|++++.| |.|
T Consensus 112 ~~~~~~~~~~-~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~d-g~i 188 (321)
T 3ow8_A 112 GKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAID-GII 188 (321)
T ss_dssp TEEEEEEECC-TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETT-SCE
T ss_pred CCEEEEEeCC-CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCC-CeE
Confidence 5544433322 11222233333 33334333 334443 689999999999999999999 699
Q ss_pred EEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-
Q 018806 238 TIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF- 314 (350)
Q Consensus 238 ~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~- 314 (350)
++||+++++... +..|...|.+++|+|++++|++++.|+.|++||+++++. ..+..|...|.+++|+|+|++|++++
T Consensus 189 ~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 189 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 999999987655 445788999999999999999999999999999998887 45678999999999999999999887
Q ss_pred CCCeEEEEEEeCCCC--CCCceeecccccceee
Q 018806 315 AGSLTLGSIHFASKP--PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 315 ~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 345 (350)
++. +..|++.... ..+.+|..+|....+.
T Consensus 269 D~~--v~iwd~~~~~~~~~~~~h~~~v~~v~~s 299 (321)
T 3ow8_A 269 DKS--VKVWDVGTRTCVHTFFDHQDQVWGVKYN 299 (321)
T ss_dssp TSC--EEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCc--EEEEeCCCCEEEEEEcCCCCcEEEEEEC
Confidence 444 4445544332 2556777777665554
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.1e-32 Score=236.98 Aligned_cols=240 Identities=16% Similarity=0.217 Sum_probs=183.9
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|++++|+|++++|++++.|++|+|||+.. +.....+ ..|...|.+++|+|+++.+++++.|+.+++|++......
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~--~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYT--TNKVHAI-PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTT--CCEEEEE-ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCC--CCcceEe-ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 4599999999999999999999999999854 5555554 478889999999999999999999999999999754321
Q ss_pred cee---eccccc--------ccce-ecCCCCCceEEee--------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEE
Q 018806 180 ASV---RSGAAS--------FLGA-LSRGPGTRWTLVD--------FLRSQNGEQITALSWGPDGRYLASASYESSSFTI 239 (350)
Q Consensus 180 ~~~---~~~~~~--------~~~~-~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~i 239 (350)
... ..+... +... ++.+.++.+.+|+ .+.+|. ..|.+++|+|++++|++++.| |+|++
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sg~~d-~~v~~ 210 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-GDVMSLSLAPDTRLFVSGACD-ASAKL 210 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEEE
T ss_pred ceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCC-CceEEEEECCCCCEEEEEeCC-CcEEE
Confidence 111 111111 1111 3334455555443 466776 799999999999999999999 69999
Q ss_pred EeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc---CCCCeEEEEEcCCCCEEEEEEC
Q 018806 240 WDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS---TSGFVTGATWDPEGRMILLAFA 315 (350)
Q Consensus 240 wd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~~~ 315 (350)
||++++.... +..|...|.+++|+|++++|++++.|++|++||+++++...... +...|.+++|+|+|++|++++.
T Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 9999987655 45678899999999999999999999999999999887644333 3347999999999999998874
Q ss_pred CCeEEEEEEeCCCC--CCCceeecccccceee
Q 018806 316 GSLTLGSIHFASKP--PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 316 ~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 345 (350)
+ ..+..|++.... ..+.+|..+|....+.
T Consensus 291 d-~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s 321 (340)
T 1got_B 291 D-FNCNVWDALKADRAGVLAGHDNRVSCLGVT 321 (340)
T ss_dssp T-SEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred C-CeEEEEEcccCcEeeEeecCCCcEEEEEEc
Confidence 3 245555554333 2567888888766654
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.2e-32 Score=233.95 Aligned_cols=193 Identities=16% Similarity=0.249 Sum_probs=161.4
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|.+++|+|++++|++|+.|+.|++||+.. ++....+ .+|...|.+++|+|++..+++++.|++|++||+.....
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~--~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-- 131 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-- 131 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCC--CcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--
Confidence 689999999999999999999999999954 5555555 48999999999999998999999999999999973221
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEEEeCCCCCcee-ee-ecCCCe
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRYLASASYESSSFTIWDVAQGLGTP-IR-RGFGGL 257 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~-~~~~~v 257 (350)
+...+.+|. ..|.+++|+| ++..|++++.| |+|++||++.+.... +. .+...+
T Consensus 132 ----------------------~~~~~~~h~-~~v~~v~~~p~~~~~l~sgs~D-~~v~iwd~~~~~~~~~~~~~~~~~v 187 (304)
T 2ynn_A 132 ----------------------LEQTFEGHE-HFVMCVAFNPKDPSTFASGCLD-RTVKVWSLGQSTPNFTLTTGQERGV 187 (304)
T ss_dssp ----------------------EEEEECCCC-SCEEEEEECTTCTTEEEEEETT-SEEEEEETTCSSCSEEEECCCTTCE
T ss_pred ----------------------hhhhhcccC-CcEEEEEECCCCCCEEEEEeCC-CeEEEEECCCCCccceeccCCcCcE
Confidence 234566775 7999999999 67899999999 699999998776543 22 345789
Q ss_pred EEEEEcC--CCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEE
Q 018806 258 SILKWSP--TGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 258 ~~~~~sp--~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~ 322 (350)
..++|+| ++++|++++.|++|++||+++++. ..+.+|...|..++|+|++++|++++ ++.+.+|.
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 9999987 788999999999999999999887 45778999999999999999999887 44444443
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.9e-32 Score=235.12 Aligned_cols=202 Identities=15% Similarity=0.145 Sum_probs=159.1
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCe-EEEEecCCcEEEEecCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGR-SLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~~d~~v~iwd~~~~~ 177 (350)
...|++++|+|+|++|++|+.|++|++||+.. ++....+ .+|...|.+++|+|++.. +++++.|++|++||++..+
T Consensus 127 ~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~--~~~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ--QVVLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCC--CcEEEEE-cCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 45799999999999999999999999999954 5555555 589999999999999865 5567779999999998554
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-CCeEEEEEeCCCeEEEEeCCCCCcee-eeecCC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRYLASASYESSSFTIWDVAQGLGTP-IRRGFG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~ 255 (350)
....+.. ..+ ...+.+++|+|+ +++|++++.| |+|++||+++++... +..|..
T Consensus 204 ~~~~~~~-----------------------~~~-~~~~~~~~~~p~~~~~l~sg~~d-g~v~~wd~~~~~~~~~~~~h~~ 258 (344)
T 4gqb_B 204 PASQIGC-----------------------SAP-GYLPTSLAWHPQQSEVFVFGDEN-GTVSLVDTKSTSCVLSSAVHSQ 258 (344)
T ss_dssp CEEECC----------------------------CCCEEEEEECSSCTTEEEEEETT-SEEEEEESCC--CCEEEECCSS
T ss_pred eeeeeec-----------------------cee-eccceeeeecCCCCcceEEeccC-CcEEEEECCCCcEEEEEcCCCC
Confidence 3322111 122 357899999995 5667888888 799999999987654 556889
Q ss_pred CeEEEEEcCCC-CEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 256 GLSILKWSPTG-DYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 256 ~v~~~~~sp~g-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
.|.+++|+|+| ++|++++.|++|+|||+++++...+.+|...|++++|+|+++.|+++++.+..+..|++...
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99999999998 57899999999999999999988888999999999999999866544433345556665543
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-31 Score=239.75 Aligned_cols=241 Identities=19% Similarity=0.280 Sum_probs=187.7
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
+..+|++++|+|++++|++|+.|++|+|||+.. +.....+ .+|...|.+++|+|+++.+++++.|++|++||+....
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~--~~~~~~l-~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTL-KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTT--CCCCEEE-CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CcEEEEE-eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 356899999999999999999999999999964 5554555 5899999999999999999999999999999997543
Q ss_pred CCceeecccccccce----------ecCCCCCceEEee--------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEE
Q 018806 178 NAASVRSGAASFLGA----------LSRGPGTRWTLVD--------FLRSQNGEQITALSWGPDGRYLASASYESSSFTI 239 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~i 239 (350)
....+. ++...+.. ++.+.++.+.+|+ .+.+|. ..|.++.|+|++++|++++.| |+|++
T Consensus 184 ~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~g~~l~s~s~D-~~v~v 260 (410)
T 1vyh_C 184 CIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-EWVRMVRPNQDGTLIASCSND-QTVRV 260 (410)
T ss_dssp EEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEETT-SCEEE
T ss_pred eeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-ccEEEEEECCCCCEEEEEcCC-CeEEE
Confidence 322221 11222222 2333445555444 566775 689999999999999999999 69999
Q ss_pred EeCCCCCcee-eeecCCCeEEEEEcCC--------------------CCEEEEEecCCeEEEEeCCCCce-eccccCCCC
Q 018806 240 WDVAQGLGTP-IRRGFGGLSILKWSPT--------------------GDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGF 297 (350)
Q Consensus 240 wd~~~~~~~~-~~~~~~~v~~~~~sp~--------------------g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~ 297 (350)
||+.+++... +..|...|.+++|+|+ |.+|++|+.|++|++||+++++. ..+.+|...
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~ 340 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc
Confidence 9999887654 5568889999999996 67899999999999999999887 456789999
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEEeCCC--CCCCceeecccccceee
Q 018806 298 VTGATWDPEGRMILLAFAGSLTLGSIHFASK--PPSLDAHLLPVDLPDIV 345 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~ 345 (350)
|.+++|+|+|++|++++.+ ..+..|++... ...+.+|..+|....+.
T Consensus 341 v~~v~~~~~g~~l~s~s~D-~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp EEEEEECSSSSCEEEEETT-TEEEEECCTTSCCCEEEECCSSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCC-CeEEEEECCCCceEEEEcCCCCcEEEEEEc
Confidence 9999999999999988733 24444544333 33666788877766554
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-31 Score=239.40 Aligned_cols=243 Identities=16% Similarity=0.280 Sum_probs=190.9
Q ss_pred hhhhhhhhhhccccccCCCCcCCCC------------------------ccCeeEEEEecCCCEEEEEECCCeEEEEEcc
Q 018806 74 FSTLHGIISHSIKPLLHPDHVHLLP------------------------EVDLQGVSWHQHKHIVAFISGSTQVIVRDYE 129 (350)
Q Consensus 74 ~~~~~gh~~~~~~~~~~p~~~~~~~------------------------~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~ 129 (350)
...+.||.+.+.+..+.|....++. ...|++++|+|++++|++|+.|++|+|||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4567799888888888876443332 2269999999999999999999999999995
Q ss_pred CCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccce----------ecCCCCC
Q 018806 130 DSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGA----------LSRGPGT 199 (350)
Q Consensus 130 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 199 (350)
. +.....+ .+|...|.+++|+|++..+++++.|++|++||+..+.....+. +....+.. ++.+.++
T Consensus 181 ~--~~~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 181 G--FECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp S--SCEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred C--CceeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCCC
Confidence 3 4444444 5899999999999999999999999999999998655443332 11112222 2333445
Q ss_pred ceEEee--------eccCCCCCceeeEEECCC--------------------CCeEEEEEeCCCeEEEEeCCCCCcee-e
Q 018806 200 RWTLVD--------FLRSQNGEQITALSWGPD--------------------GRYLASASYESSSFTIWDVAQGLGTP-I 250 (350)
Q Consensus 200 ~~~~~~--------~~~~~~~~~v~~~~~sp~--------------------g~~l~~~~~d~g~i~iwd~~~~~~~~-~ 250 (350)
.+.+|+ .+.+|. ..|.+++|+|+ |.+|++++.| |+|++||++++.... +
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHR-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-KTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp CEEEEETTTCCEEEEECCCS-SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-SEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCceeeEecCCC-ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-CeEEEEECCCCceEEEE
Confidence 555554 456675 68999999996 6689999999 699999999987654 5
Q ss_pred eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEE
Q 018806 251 RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 251 ~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~ 322 (350)
..|...|.+++|+|+|++|++++.|++|++||+++++. ..+..|...|++++|+|++.+|++++ ++.+.+|.
T Consensus 335 ~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 56888999999999999999999999999999998876 45678999999999999999999887 44445443
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=230.14 Aligned_cols=192 Identities=18% Similarity=0.250 Sum_probs=164.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.+.+++|+|++++|++++.|+.+++|++.. +.....+ ..|...|.+++|+|+++.+++++.|+.|++||+....
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~--~~~~~~~-~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~--- 197 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVES--GKKEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK--- 197 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTT--CSEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCC--CceeEEe-cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---
Confidence 578899999999999999999999999964 4444444 4678889999999999999999999999999997332
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEE
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSI 259 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~ 259 (350)
+...+.+|. ..|.+++|+|++++|++++.| |+|++||++++.... +..|...|.+
T Consensus 198 ----------------------~~~~~~~h~-~~v~~l~~spd~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 198 ----------------------LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD-GYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp ----------------------EEEEECCCS-SCCCEEEECTTSCEEEEECTT-SCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred ----------------------EEEEEcccC-CceeEEEEcCCCCEEEEEcCC-CeEEEEECCCcceeEEEcCCCCceEE
Confidence 244566775 699999999999999999999 699999999887654 4568889999
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEE
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~ 322 (350)
++|+|++++|++++.|++|++||+++++. ..+..|...|.+++|+|+|++|++++ ++.+.+|+
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 99999999999999999999999999887 45678999999999999999999887 44444443
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=228.03 Aligned_cols=218 Identities=17% Similarity=0.174 Sum_probs=168.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCcee-EecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDAC-ILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
...|.+++|+|++ .|++|+.||+|+|||+......... ....+|.+.|++++|+|+|+.+++++.|++|++||+..+.
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3469999999985 6779999999999999653322221 2234799999999999999999999999999999998432
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCC-eEEEEEeCCCeEEEEeCCCCCceeee---ec
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-YLASASYESSSFTIWDVAQGLGTPIR---RG 253 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~g~i~iwd~~~~~~~~~~---~~ 253 (350)
+...+.+|. ..|.+++|+|++. .|++++.| |+|++||+++++..... .+
T Consensus 161 -------------------------~~~~~~~h~-~~V~~~~~~~~~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~~~~~ 213 (344)
T 4gqb_B 161 -------------------------VLSSYRAHA-AQVTCVAASPHKDSVFLSCSED-NRILLWDTRCPKPASQIGCSAP 213 (344)
T ss_dssp -------------------------EEEEECCCS-SCEEEEEECSSCTTEEEEEETT-SCEEEEETTSSSCEEECC----
T ss_pred -------------------------EEEEEcCcC-CceEEEEecCCCCCceeeeccc-cccccccccccceeeeeeccee
Confidence 355677886 7999999999985 57888888 69999999998766543 23
Q ss_pred CCCeEEEEEcCC-CCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEEEeCCCC
Q 018806 254 FGGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGR-MILLAF-AGSLTLGSIHFASKP 329 (350)
Q Consensus 254 ~~~v~~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~-~l~~~~-~~~~~~~~~~~~~~~ 329 (350)
...+.+++|+|+ +++|++|+.|++|++||+++++. ..+..|...|++++|+|+|. +|++++ ++. +..|++....
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~--i~vwd~~~~~ 291 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS--LAVLDSSLSE 291 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC--EEEECTTCCE
T ss_pred eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe--EEEEECCCCc
Confidence 456899999995 56789999999999999999887 56778999999999999985 677666 443 4444444332
Q ss_pred -CCCceeecccccceeec
Q 018806 330 -PSLDAHLLPVDLPDIVS 346 (350)
Q Consensus 330 -~~~~~~~~~v~~~~~~~ 346 (350)
..+.+|..+|....+++
T Consensus 292 ~~~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 292 LFRSQAHRDFVRDATWSP 309 (344)
T ss_dssp EEEECCCSSCEEEEEECS
T ss_pred EEEEcCCCCCEEEEEEeC
Confidence 25568888887776653
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.98 E-value=9e-31 Score=224.89 Aligned_cols=214 Identities=14% Similarity=0.200 Sum_probs=171.7
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|++++|+|++++|++++.||.|++||+.. +.....+ ..|..+|.+++|+|+++.+++++.|++|++||+.....
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~-- 89 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYET--QVEVRSI-QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-- 89 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEE-ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE--
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCC--CceeEEe-eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE--
Confidence 499999999999999999999999999954 5555554 47889999999999999999999999999999984432
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce--eeeecCCCeE
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT--PIRRGFGGLS 258 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~--~~~~~~~~v~ 258 (350)
...+.+|. ..|.+++|+|++++|++++.| |+|++||++++... .+..|...|.
T Consensus 90 -----------------------~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D-~~v~lWd~~~~~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 90 -----------------------VVDFEAHP-DYIRSIAVHPTKPYVLSGSDD-LTVKLWNWENNWALEQTFEGHEHFVM 144 (304)
T ss_dssp -----------------------EEEEECCS-SCEEEEEECSSSSEEEEEETT-SCEEEEEGGGTTEEEEEECCCCSCEE
T ss_pred -----------------------EEEEeCCC-CcEEEEEEcCCCCEEEEECCC-CeEEEEECCCCcchhhhhcccCCcEE
Confidence 34466776 799999999999999999999 69999999887433 3456889999
Q ss_pred EEEEcC-CCCEEEEEecCCeEEEEeCCCCcee-cc-ccCCCCeEEEEEcC--CCCEEEEEECCCeEEEEEEeCCCC--CC
Q 018806 259 ILKWSP-TGDYFFAAKFDGTFYLWETNTWTSE-PW-SSTSGFVTGATWDP--EGRMILLAFAGSLTLGSIHFASKP--PS 331 (350)
Q Consensus 259 ~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~~-~~-~~~~~~v~~~~~s~--~g~~l~~~~~~~~~~~~~~~~~~~--~~ 331 (350)
+++|+| ++..|++++.|++|++||+++++.. .+ ..+...+..+.|+| ++++|++++.+ ..+..|++.... ..
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D-~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-LTIKIWDYQTKSCVAT 223 (304)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT-SEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC-CeEEEEeCCCCcccee
Confidence 999999 6789999999999999999877653 22 35667889999987 77889888733 345555554432 35
Q ss_pred Cceeecccccceee
Q 018806 332 LDAHLLPVDLPDIV 345 (350)
Q Consensus 332 ~~~~~~~v~~~~~~ 345 (350)
+.+|..+|....+.
T Consensus 224 ~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 224 LEGHMSNVSFAVFH 237 (304)
T ss_dssp EECCSSCEEEEEEC
T ss_pred eCCCCCCEEEEEEC
Confidence 66787777655544
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=2.5e-30 Score=221.42 Aligned_cols=199 Identities=15% Similarity=0.238 Sum_probs=159.7
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
..|++++|+|+|++||+|+.|++|+||++.....+....+ .+|.+.|.+++|+|+ +..+++++.|++|++||+..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 3599999999999999999999999999964334444444 589999999999864 6788888889999999997432
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC--CCeEEEEEeCCCeEEEEeCCCCC---ceeeee
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD--GRYLASASYESSSFTIWDVAQGL---GTPIRR 252 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~d~g~i~iwd~~~~~---~~~~~~ 252 (350)
.. ....+.+|. ..|.+++|+|+ |.+|++++.| |+|++||++++. ...+..
T Consensus 89 ~~-----------------------~~~~~~~h~-~~v~~v~~~p~~~g~~l~s~s~d-~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 89 WS-----------------------QIAVHAVHS-ASVNSVQWAPHEYGPMLLVASSD-GKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp BC-----------------------CCEEECCCS-SCEEEEEECCGGGCSEEEEEETT-SEEEEEEBCSSSCBCCEEEEC
T ss_pred eE-----------------------EEEEeecCC-CceeEEEeCcCCCCcEEEEEECC-CcEEEEEecCCCceeeeeeec
Confidence 11 122345565 68999999997 8999999999 699999998763 234556
Q ss_pred cCCCeEEEEEcCC-------------CCEEEEEecCCeEEEEeCCCCc----e-eccccCCCCeEEEEEcCCC---CEEE
Q 018806 253 GFGGLSILKWSPT-------------GDYFFAAKFDGTFYLWETNTWT----S-EPWSSTSGFVTGATWDPEG---RMIL 311 (350)
Q Consensus 253 ~~~~v~~~~~sp~-------------g~~l~~~~~d~~v~iwd~~~~~----~-~~~~~~~~~v~~~~~s~~g---~~l~ 311 (350)
|...+.+++|+|+ +++|++++.|++|++||+++++ . ..+.+|...|.+++|+|++ ++|+
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEE
Confidence 8889999999997 5799999999999999998765 2 3566899999999999995 7888
Q ss_pred EEE-CCCeEEEEEE
Q 018806 312 LAF-AGSLTLGSIH 324 (350)
Q Consensus 312 ~~~-~~~~~~~~~~ 324 (350)
+++ ++.+.+|.++
T Consensus 224 s~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 224 SVSQDRTCIIWTQD 237 (297)
T ss_dssp EEETTSCEEEEEES
T ss_pred EEECCCcEEEEEeC
Confidence 777 5555555543
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.98 E-value=3.4e-30 Score=222.78 Aligned_cols=193 Identities=16% Similarity=0.148 Sum_probs=163.7
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|.+++|+|+|++|++++.|++|+|||+.. ++....+ .+|...|.+++|+|++..+++++.|++|++||+.. .
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~--~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~-- 139 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVAT--GETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-Q-- 139 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-C--
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCC--CCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-C--
Confidence 3689999999999999999999999999954 5555554 58999999999999999999999999999999862 1
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC------CCeEEEEEeCCCeEEEEeCCCCCcee-eee
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD------GRYLASASYESSSFTIWDVAQGLGTP-IRR 252 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~------g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~ 252 (350)
....+.+|. ..|.+++|+|. +..|++++.| |+|++||+++.+... +..
T Consensus 140 -----------------------~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~ 194 (319)
T 3frx_A 140 -----------------------CLATLLGHN-DWVSQVRVVPNEKADDDSVTIISAGND-KMVKAWNLNQFQIEADFIG 194 (319)
T ss_dssp -----------------------EEEEECCCS-SCEEEEEECCC------CCEEEEEETT-SCEEEEETTTTEEEEEECC
T ss_pred -----------------------eEEEEeccC-CcEEEEEEccCCCCCCCccEEEEEeCC-CEEEEEECCcchhheeecC
Confidence 133456675 68999999985 4489999999 699999999887554 556
Q ss_pred cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 018806 253 GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSI 323 (350)
Q Consensus 253 ~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~ 323 (350)
|...|.+++|+|+|++|++++.|+.|++||+.+++......+...|.+++|+|++.+|+++.++.+.++.+
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~ 265 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSL 265 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEe
Confidence 88999999999999999999999999999999988865555667899999999999999888776666654
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=2.3e-30 Score=226.22 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=157.6
Q ss_pred eeEEEE-----ec-CCCEEEEEECCCeEEEEEccCCCC----CceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEE
Q 018806 102 LQGVSW-----HQ-HKHIVAFISGSTQVIVRDYEDSEG----KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 171 (350)
Q Consensus 102 V~~v~~-----sp-~g~~la~~s~d~~i~iw~~~~~~~----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iw 171 (350)
|++++| ++ ++++|++|+.|++|++|++..... ........+|...|.+++|+|++..+++++.|++|++|
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lw 103 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLW 103 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 899999 66 999999999999999999864321 11223335899999999999998888999999999999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR 251 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~ 251 (350)
|+.... ....+.+|. ..|.+++|+|++++|++++.| |+|++||+.........
T Consensus 104 d~~~~~-------------------------~~~~~~~h~-~~v~~v~~sp~~~~l~s~~~d-~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 104 DLRTGT-------------------------TYKRFVGHQ-SEVYSVAFSPDNRQILSAGAE-REIKLWNILGECKFSSA 156 (343)
T ss_dssp ETTSSC-------------------------EEEEEECCC-SCEEEEEECSSTTEEEEEETT-SCEEEEESSSCEEEECC
T ss_pred ECCCCc-------------------------EEEEEcCCC-CcEEEEEECCCCCEEEEEcCC-CEEEEEeccCCceeeee
Confidence 998432 234466775 799999999999999999999 69999999844333222
Q ss_pred ---ecCCCeEEEEEcCCC----------CEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCe
Q 018806 252 ---RGFGGLSILKWSPTG----------DYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL 318 (350)
Q Consensus 252 ---~~~~~v~~~~~sp~g----------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~ 318 (350)
.|...+.+++|+|++ .+|++++.|+.|++||........+..|...|.+++|+|+|++|++++.+ .
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~d-g 235 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKD-K 235 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT-C
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCC-C
Confidence 467789999999987 78999999999999996543345677899999999999999999988733 2
Q ss_pred EEEEEEe
Q 018806 319 TLGSIHF 325 (350)
Q Consensus 319 ~~~~~~~ 325 (350)
.+..|++
T Consensus 236 ~v~iwd~ 242 (343)
T 2xzm_R 236 KLLIWDI 242 (343)
T ss_dssp EEEEEES
T ss_pred eEEEEEC
Confidence 4455555
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-30 Score=223.62 Aligned_cols=203 Identities=15% Similarity=0.289 Sum_probs=157.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC-CCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD-SQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
.|++++|+|+ +||+|+.|++|++|++..........+..+ |...|.+++|+|+++.+++++.|++|++||+......
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 4999999998 999999999999999964322333344234 9999999999999988889999999999998632110
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC-C---ce-eeeecC
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG-L---GT-PIRRGF 254 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~-~---~~-~~~~~~ 254 (350)
. ....+...+.+|. ..|.+++|+|+|++|++++.| |+|++||++.. . .. .+..|.
T Consensus 94 ~------------------~~~~~~~~~~~h~-~~V~~v~~sp~g~~las~s~D-~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 94 T------------------FEMDLLAIIEGHE-NEVKGVAWSNDGYYLATCSRD-KSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp -------------------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT-SCEEEEECCTTCCCCEEEEEECCCS
T ss_pred c------------------ccceeEEEEcCCC-CcEEEEEECCCCCEEEEEeCC-CEEEEEeccCCCCCeEEEEEeccCC
Confidence 0 0122355677886 799999999999999999999 69999999533 2 22 345688
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCc--e-eccccCCCCeEEEEEcCC--CCEEEEEE-CCCeEEEEEEe
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT--S-EPWSSTSGFVTGATWDPE--GRMILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~--~-~~~~~~~~~v~~~~~s~~--g~~l~~~~-~~~~~~~~~~~ 325 (350)
..|.+++|+|++++|++++.|++|++||..++. . ..+.+|...|.+++|+|+ +.+|++++ ++.+.+|.+.-
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 899999999999999999999999999998763 2 456789999999999999 67888887 66667776654
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=2.9e-30 Score=242.51 Aligned_cols=225 Identities=17% Similarity=0.218 Sum_probs=169.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC----CcEEEEecC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----GGICIWAPS 174 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~v~iwd~~ 174 (350)
...|++++|+|+|++||+|+.|++|+|||+...+......+ .+|.+.|.+++|+|+++.+++++.+ +.|++||..
T Consensus 59 ~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~-~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~ 137 (611)
T 1nr0_A 59 SHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI-PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG 137 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE-ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC
T ss_pred CCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee-cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC
Confidence 34599999999999999999999999999864333333333 4789999999999999888888765 478888854
Q ss_pred CC-----CCCceeecccccccce---ecCCCCCceEEe--------eeccCCCCCceeeEEECCCCCeEEEEEeCCCeEE
Q 018806 175 YP-----GNAASVRSGAASFLGA---LSRGPGTRWTLV--------DFLRSQNGEQITALSWGPDGRYLASASYESSSFT 238 (350)
Q Consensus 175 ~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~ 238 (350)
.. ++...+....+.+... ++.+.++.+.+| ..+.+|. ..|.+++|+|+|++|++++.| |+|+
T Consensus 138 ~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~-~~V~~v~fspdg~~las~s~D-~~i~ 215 (611)
T 1nr0_A 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT-KFVHSVRYNPDGSLFASTGGD-GTIV 215 (611)
T ss_dssp CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEE
T ss_pred CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecccc-CceEEEEECCCCCEEEEEECC-CcEE
Confidence 21 1222222223333221 223334444444 4567786 799999999999999999999 6999
Q ss_pred EEeCCCCCceeee--------ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee---------------------
Q 018806 239 IWDVAQGLGTPIR--------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE--------------------- 289 (350)
Q Consensus 239 iwd~~~~~~~~~~--------~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~--------------------- 289 (350)
+||+.+++..... .|.+.|.+++|+|+|++|++++.|++|++||+++++..
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 9999988765543 57889999999999999999999999999999887542
Q ss_pred -----------------------ccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 290 -----------------------PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 290 -----------------------~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.+.+|...|++++|+|+|++|++++.+. .+..|++..
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~-~v~~Wd~~~ 355 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG-HINSWDIST 355 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTT
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC-cEEEEECCC
Confidence 1236888999999999999999887332 455555543
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=5.5e-30 Score=224.90 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=160.1
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCC-eEEEEecCCcEEEEecCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGG-RSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~iwd~~~~~ 177 (350)
...|++++|+|++++|++++.|+.|++||+.. ++....+ .+|...|++++|+|++. .+++++.|+.|++||+....
T Consensus 139 ~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~--~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 139 DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ--KAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCC--CcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 45799999999999999999999999999953 5555555 57999999999999875 56677779999999998544
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC-CeEEEEEeCCCeEEEEeCCCCCcee-eeecCC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG-RYLASASYESSSFTIWDVAQGLGTP-IRRGFG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~ 255 (350)
....+. +..+ ...+.+++|+|++ .+|++++.| |.|++||+++++... +..|..
T Consensus 216 ~~~~~~-----------------------~~~~-~~~v~~v~~sp~~~~~la~g~~d-~~i~~wd~~~~~~~~~~~~~~~ 270 (357)
T 4g56_B 216 PATRID-----------------------FCAS-DTIPTSVTWHPEKDDTFACGDET-GNVSLVNIKNPDSAQTSAVHSQ 270 (357)
T ss_dssp CBCBCC-----------------------CTTC-CSCEEEEEECTTSTTEEEEEESS-SCEEEEESSCGGGCEEECCCSS
T ss_pred eeeeee-----------------------eccc-cccccchhhhhcccceEEEeecc-cceeEEECCCCcEeEEEeccce
Confidence 332211 1222 3679999999985 567788888 699999999987655 446788
Q ss_pred CeEEEEEcCCC-CEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcC-CCCEEEEEE-CCCeEEEEE
Q 018806 256 GLSILKWSPTG-DYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDP-EGRMILLAF-AGSLTLGSI 323 (350)
Q Consensus 256 ~v~~~~~sp~g-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~-~~~~~~~~~ 323 (350)
.|.+++|+|++ ++|++++.|++|+|||+++++......|...|++++|+| ++++|++++ |+.+.+|.+
T Consensus 271 ~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 271 NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 99999999987 578999999999999999999888889999999999998 799999887 444444443
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=7.4e-30 Score=223.14 Aligned_cols=223 Identities=17% Similarity=0.254 Sum_probs=172.1
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|+|++||+++.|++++||++..........+ .+|...|.+++|+|+++.+++++.|++|++||+.....
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 34699999999999999999999999999864332333333 58999999999999999999999999999999974322
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce---eeeecCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT---PIRRGFG 255 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~---~~~~~~~ 255 (350)
..+...+.+|. ..|.+++|+|++++|++++.| |+|++||.+.+... .+..|..
T Consensus 140 ----------------------~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-~~i~~w~~~~~~~~~~~~~~~h~~ 195 (345)
T 3fm0_A 140 ----------------------YECVSVLNSHT-QDVKHVVWHPSQELLASASYD-DTVKLYREEEDDWVCCATLEGHES 195 (345)
T ss_dssp ----------------------EEEEEEECCCC-SCEEEEEECSSSSCEEEEETT-SCEEEEEEETTEEEEEEEECCCSS
T ss_pred ----------------------eEEEEEecCcC-CCeEEEEECCCCCEEEEEeCC-CcEEEEEecCCCEEEEEEecCCCC
Confidence 12344566775 689999999999999999999 69999999877532 3556889
Q ss_pred CeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce----------------eccc-cCCCCeEEEEEcCCCCEEEEEE-CCC
Q 018806 256 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS----------------EPWS-STSGFVTGATWDPEGRMILLAF-AGS 317 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~----------------~~~~-~~~~~v~~~~~s~~g~~l~~~~-~~~ 317 (350)
.|.+++|+|+|++|++++.|++|++||...... ..+. .|...|.+++|+|++..|++++ ++.
T Consensus 196 ~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~ 275 (345)
T 3fm0_A 196 TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA 275 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC
T ss_pred ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe
Confidence 999999999999999999999999999743221 1112 2778899999999999999888 555
Q ss_pred eEEEEEEeCCCCC--C-------Cceeecccccceeec
Q 018806 318 LTLGSIHFASKPP--S-------LDAHLLPVDLPDIVS 346 (350)
Q Consensus 318 ~~~~~~~~~~~~~--~-------~~~~~~~v~~~~~~~ 346 (350)
+.+|.++....+. . ..+|..+|....+.+
T Consensus 276 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p 313 (345)
T 3fm0_A 276 IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNP 313 (345)
T ss_dssp EEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECS
T ss_pred EEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeC
Confidence 5555554332211 1 236677776655543
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=4.1e-29 Score=217.96 Aligned_cols=244 Identities=13% Similarity=0.134 Sum_probs=184.2
Q ss_pred hhhhhhhhhhccccccCCCCcCCCC------------------------ccCeeEEEEecCCCEEEEEECCCeEEEEEcc
Q 018806 74 FSTLHGIISHSIKPLLHPDHVHLLP------------------------EVDLQGVSWHQHKHIVAFISGSTQVIVRDYE 129 (350)
Q Consensus 74 ~~~~~gh~~~~~~~~~~p~~~~~~~------------------------~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~ 129 (350)
...+.||.+.+....+.|+...++. ...|.+++|+|++++|++++.|+.+++|++.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 3456677666666666655433322 2358999999999999999999999999996
Q ss_pred CCCCC-ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceec----------CCCC
Q 018806 130 DSEGK-DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALS----------RGPG 198 (350)
Q Consensus 130 ~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 198 (350)
...+. .......+|.+.|.++.|+++ ..+++++.|++|++||+........+. +....+..+. .+.+
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCC
Confidence 53322 222233579999999999998 568889999999999998554333222 2222222222 2334
Q ss_pred CceEEee--------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCC
Q 018806 199 TRWTLVD--------FLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGD 267 (350)
Q Consensus 199 ~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~ 267 (350)
+.+.+|+ .+.+|. ..|.+++|+|++++|++++.| |+|++||+++++......+. ..+.+++|+|+|+
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~d-~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNAFATGSDD-ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred CcEEEEECCCCeeEEEEcCCc-CCEEEEEEcCCCCEEEEEcCC-CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 4455444 456675 689999999999999999999 69999999988766554443 4799999999999
Q ss_pred EEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEE
Q 018806 268 YFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLG 321 (350)
Q Consensus 268 ~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~ 321 (350)
+|++|+.|+.|++||+.+++. ..+.+|...|.+++|+|+|++|++++ ++.+.+|
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 999999999999999998877 45778999999999999999999987 5555554
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.8e-30 Score=230.01 Aligned_cols=241 Identities=15% Similarity=0.204 Sum_probs=177.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|++++|++|+.|++|+|||+.. +.....+ ..|...|.+++|+|+|+.+++++.|+.+++|++.....
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~--~~~~~~~-~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALT--SQKTHAI-KLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTT--TEEEEEE-ECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CccceEE-ecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 34699999999999999999999999999854 5555555 47899999999999999999999999999999864221
Q ss_pred ------Cceeecccccccc-----------eecCCCCCceEEeee--------c-----cCCCCCceeeEEECC-CCCeE
Q 018806 179 ------AASVRSGAASFLG-----------ALSRGPGTRWTLVDF--------L-----RSQNGEQITALSWGP-DGRYL 227 (350)
Q Consensus 179 ------~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--------~-----~~~~~~~v~~~~~sp-~g~~l 227 (350)
......++...+. -++.+.++.+.+|+. + .+|. ..|.+++|++ ++.+|
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT-ADVLSLSINSLNANMF 221 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC-SCEEEEEECSSSCCEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc-cCeEEEEeecCCCCEE
Confidence 1111111111111 233445566666542 1 3454 6899999987 88999
Q ss_pred EEEEeCCCeEEEEeCCCC-Cc-eeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-c-------CCCC
Q 018806 228 ASASYESSSFTIWDVAQG-LG-TPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-S-------TSGF 297 (350)
Q Consensus 228 ~~~~~d~g~i~iwd~~~~-~~-~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-~-------~~~~ 297 (350)
++++.| |+|++||++.. .. ..+..|.+.|.+++|+|+|++|++++.|++|++||+++++..... . +...
T Consensus 222 ~sgs~D-~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 222 ISGSCD-TTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPI 300 (380)
T ss_dssp EEEETT-SCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCS
T ss_pred EEEECC-CeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCc
Confidence 999999 69999999843 33 345678899999999999999999999999999999998764322 1 2235
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEEeCCCCC------CCceeecccccceee
Q 018806 298 VTGATWDPEGRMILLAFAGSLTLGSIHFASKPP------SLDAHLLPVDLPDIV 345 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~ 345 (350)
|++++|+|+|++|++++.+ ..+..|+...... ...+|..+|....+.
T Consensus 301 v~~~~~s~~g~~l~~g~~d-g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSN-GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS 353 (380)
T ss_dssp CSEEEECSSSSEEEEECTT-SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC
T ss_pred eEEEEECCCCCEEEEEECC-CCEEEEECCCCceEEEEecccCCCCCceEEEEEC
Confidence 8999999999999988632 3455555433221 125788877766654
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=4.5e-30 Score=221.72 Aligned_cols=221 Identities=14% Similarity=0.203 Sum_probs=163.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEee--CCCeEEEEecCCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
.|++++|+|+|++||+|+.|++|+|||+..........+ .+|...|.+++|+| +++.|++++.|++|++||+..+..
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l-~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEE-ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEE-cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 499999999999999999999999999964221222333 58999999999986 378899999999999999985431
Q ss_pred Cc-eeecccccccceecCC------------CCCceEEee-----------eccCCCCCceeeEEECCC-----------
Q 018806 179 AA-SVRSGAASFLGALSRG------------PGTRWTLVD-----------FLRSQNGEQITALSWGPD----------- 223 (350)
Q Consensus 179 ~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~-----------~~~~~~~~~v~~~~~sp~----------- 223 (350)
.. ....+....+..+.+. .++.+.+++ .+.+|. ..+.+++|+|+
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT-IGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS-SCBCCCEECCCCCC------CC
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc-CCcceEEEccccCCcccccccc
Confidence 11 1112222233333332 334444432 334564 68999999997
Q ss_pred ------CCeEEEEEeCCCeEEEEeCCCCC---c-eeeeecCCCeEEEEEcCCC----CEEEEEecCCeEEEEeCCCCc--
Q 018806 224 ------GRYLASASYESSSFTIWDVAQGL---G-TPIRRGFGGLSILKWSPTG----DYFFAAKFDGTFYLWETNTWT-- 287 (350)
Q Consensus 224 ------g~~l~~~~~d~g~i~iwd~~~~~---~-~~~~~~~~~v~~~~~sp~g----~~l~~~~~d~~v~iwd~~~~~-- 287 (350)
+++|++++.| |+|++||++... . ..+..|...|.+++|+|++ ++|++++.|++|++||+++..
T Consensus 173 ~~~~~~~~~l~sgs~D-~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCD-NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp SCCCCCCCBEECCBTT-SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred ccCccccceEEEecCC-CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 4789999999 699999997552 2 2345688899999999986 789999999999999998732
Q ss_pred ---eeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEE
Q 018806 288 ---SEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 288 ---~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~ 324 (350)
...+..|...|++++|+|+|++|++++ ++.+.+|...
T Consensus 252 ~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 252 TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 123456888999999999999999887 5555555543
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=2.9e-30 Score=226.48 Aligned_cols=243 Identities=13% Similarity=0.161 Sum_probs=180.1
Q ss_pred hhhhhhhhhhccccccCCCCcCCCCc------------------------cCeeEEEEecCCCEEEEEECCCeEEEEEcc
Q 018806 74 FSTLHGIISHSIKPLLHPDHVHLLPE------------------------VDLQGVSWHQHKHIVAFISGSTQVIVRDYE 129 (350)
Q Consensus 74 ~~~~~gh~~~~~~~~~~p~~~~~~~~------------------------~~V~~v~~sp~g~~la~~s~d~~i~iw~~~ 129 (350)
...+.||.+.+....+.|+...++.+ ..|.+++|+|+|++||+++.|+.+++|++.
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 45677887777666666654433321 136677777777777777777777777764
Q ss_pred CCCC----CceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEee
Q 018806 130 DSEG----KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVD 205 (350)
Q Consensus 130 ~~~~----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (350)
.... .....+ ..|...|.+++|+|++..+++++.|++|++||+.... +..
T Consensus 137 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-------------------------~~~ 190 (354)
T 2pbi_B 137 FDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-------------------------LLQ 190 (354)
T ss_dssp CCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-------------------------EEE
T ss_pred ccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-------------------------EEE
Confidence 3211 111222 3688999999999998899999999999999998433 244
Q ss_pred eccCCCCCceeeEEECC--CCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEe
Q 018806 206 FLRSQNGEQITALSWGP--DGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWE 282 (350)
Q Consensus 206 ~~~~~~~~~v~~~~~sp--~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd 282 (350)
.+.+|. ..|.+++|+| +|+.|++++.| |+|++||+++++... +..|...|.+++|+|++++|++++.|++|++||
T Consensus 191 ~~~~h~-~~v~~~~~~~~~~g~~l~sgs~D-g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 191 SFHGHG-ADVLCLDLAPSETGNTFVSGGCD-KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp EEECCS-SCEEEEEECCCSSCCEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEcCCC-CCeEEEEEEeCCCCCEEEEEeCC-CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 566775 6899999987 57899999999 799999999988765 445788999999999999999999999999999
Q ss_pred CCCCceeccc---cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC--CCCceeecccccceee
Q 018806 283 TNTWTSEPWS---STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP--PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 283 ~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 345 (350)
+++++..... .+...+.+++|+|+|++|++++.+ ..+..|++.... ..+.+|..+|....+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~~i~vwd~~~~~~~~~l~~h~~~v~~l~~s 335 (354)
T 2pbi_B 269 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-YTINVWDVLKGSRVSILFGHENRVSTLRVS 335 (354)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-SCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred CCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-CcEEEEECCCCceEEEEECCCCcEEEEEEC
Confidence 9988764333 233478999999999999988733 234445543322 2566788888766654
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=3e-30 Score=229.67 Aligned_cols=212 Identities=18% Similarity=0.264 Sum_probs=167.3
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|++++|+|+|++||+|+.|+.|+|||+.. ++....+ .+|...|.+++|+|+++.+++++.|++|++||+.....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~--~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~-- 199 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-- 199 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCC--CcEEEEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--
Confidence 489999999999999999999999999953 4444444 58999999999999999999999999999999984322
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEEEeCCCCCceee--------e
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRYLASASYESSSFTIWDVAQGLGTPI--------R 251 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~iwd~~~~~~~~~--------~ 251 (350)
...+.. . ..+.+++|+| ++++|++++.| |+|++||++++..... .
T Consensus 200 -----------------------~~~~~~-~-~~v~~~~~~~~~~~~l~~~s~d-~~v~iwd~~~~~~~~~~~~~~~~~~ 253 (393)
T 1erj_A 200 -----------------------SLTLSI-E-DGVTTVAVSPGDGKYIAAGSLD-RAVRVWDSETGFLVERLDSENESGT 253 (393)
T ss_dssp -----------------------EEEEEC-S-SCEEEEEECSTTCCEEEEEETT-SCEEEEETTTCCEEEEEC------C
T ss_pred -----------------------EEEEEc-C-CCcEEEEEECCCCCEEEEEcCC-CcEEEEECCCCcEEEeecccccCCC
Confidence 111222 2 5799999999 89999999999 6999999998875433 3
Q ss_pred ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-------------eccccCCCCeEEEEEcCCCCEEEEEECCCe
Q 018806 252 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-------------EPWSSTSGFVTGATWDPEGRMILLAFAGSL 318 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-------------~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~ 318 (350)
.|...|.+++|+|+|++|++++.|+.|++||+++... ..+.+|...|.+++|+|++++|++++.+ .
T Consensus 254 ~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-~ 332 (393)
T 1erj_A 254 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-R 332 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-S
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-C
Confidence 5678899999999999999999999999999976432 2455788999999999999999988743 2
Q ss_pred EEEEEEeCCCCC--CCceeeccccccee
Q 018806 319 TLGSIHFASKPP--SLDAHLLPVDLPDI 344 (350)
Q Consensus 319 ~~~~~~~~~~~~--~~~~~~~~v~~~~~ 344 (350)
.+..|+.....+ .+.+|..+|....+
T Consensus 333 ~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 333 GVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred eEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 455566554332 55678777765544
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=9.6e-30 Score=219.17 Aligned_cols=196 Identities=18% Similarity=0.317 Sum_probs=163.8
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|++++|+|++++|++++.|+.|++|++.. ++....+ .+|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~--~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~- 99 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC- 99 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCC--cccchhh-ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE-
Confidence 3499999999999999999999999999853 5554444 58999999999999999999999999999999984332
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLS 258 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~ 258 (350)
...+.+|. ..|.+++|+|++++|++++.| |+|++||+++++... +..|...+.
T Consensus 100 ------------------------~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 100 ------------------------LKTLKGHS-NYVFCCNFNPQSNLIVSGSFD-ESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp ------------------------EEEEECCS-SCEEEEEECSSSSEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------------------------EEEEcCCC-CCEEEEEEcCCCCEEEEEeCC-CcEEEEECCCCEEEEEecCCCCcEE
Confidence 34456665 689999999999999999999 699999999887654 445778999
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEeCCCCceec-c-ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 259 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-W-SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 259 ~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~-~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+++|+|++++|++++.|+.|++||+++++... + ..+...+..++|+|++++|++++.+. .+..|++.
T Consensus 154 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~ 222 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLWDYS 222 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT-EEEEEETT
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC-eEEEEECC
Confidence 99999999999999999999999999988743 2 35567899999999999999887332 44555544
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=7.6e-29 Score=215.67 Aligned_cols=232 Identities=14% Similarity=0.196 Sum_probs=170.2
Q ss_pred cchhhhhhhhhhccccccCCCCcCCCCccCeeEEEEecC-CCEEEEEECCCeEEEEEccCCCCC--ceeEecCCCCCCee
Q 018806 72 GLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQH-KHIVAFISGSTQVIVRDYEDSEGK--DACILTSDSQRDVK 148 (350)
Q Consensus 72 ~~~~~~~gh~~~~~~~~~~p~~~~~~~~~~V~~v~~sp~-g~~la~~s~d~~i~iw~~~~~~~~--~~~~~~~~~~~~v~ 148 (350)
.|..+|+||.+. |++|+|+|+ +++||+|+.|++|+|||+...... .......+|...|.
T Consensus 29 ~l~~tL~GH~~~------------------V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~ 90 (340)
T 4aow_A 29 TLRGTLKGHNGW------------------VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS 90 (340)
T ss_dssp EEEEEECCCSSC------------------EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE
T ss_pred EEEEEECCccCC------------------EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE
Confidence 345667888655 999999998 689999999999999999643221 12223358999999
Q ss_pred EEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeec------------------------------------------cc
Q 018806 149 VLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRS------------------------------------------GA 186 (350)
Q Consensus 149 ~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------------------------------------------~~ 186 (350)
+++|+|+++.+++++.|+.|++|+............ ..
T Consensus 91 ~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 91 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred EEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 999999999999999999999999872211110000 00
Q ss_pred ccccceec------------CCCCCceE--------EeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCC
Q 018806 187 ASFLGALS------------RGPGTRWT--------LVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGL 246 (350)
Q Consensus 187 ~~~~~~~~------------~~~~~~~~--------~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~ 246 (350)
...+..+. .+.++.+. +...+.+|. ..|.+++|+|++++|++++.| |+|++||+++.+
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D-g~i~iwd~~~~~ 248 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKD-GQAMLWDLNEGK 248 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-CEEEEEETTTTE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCC-CeEEEEEeccCc
Confidence 00000011 11122222 233556675 799999999999999999999 699999999998
Q ss_pred ceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec----------cccCCCCeEEEEEcCCCCEEEEEE-C
Q 018806 247 GTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP----------WSSTSGFVTGATWDPEGRMILLAF-A 315 (350)
Q Consensus 247 ~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~----------~~~~~~~v~~~~~s~~g~~l~~~~-~ 315 (350)
......+...+.+++|+|++.++ +++.|+.|++||++++.... ...|...|++++|+|+|++|++++ +
T Consensus 249 ~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 249 HLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred eeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 88777788899999999998655 55679999999999876421 236788999999999999999987 5
Q ss_pred CCeEEEEEE
Q 018806 316 GSLTLGSIH 324 (350)
Q Consensus 316 ~~~~~~~~~ 324 (350)
+.+.+|.+.
T Consensus 328 g~v~iW~~~ 336 (340)
T 4aow_A 328 NLVRVWQVT 336 (340)
T ss_dssp SCEEEEEEE
T ss_pred CEEEEEeCC
Confidence 556666554
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=5.2e-29 Score=217.57 Aligned_cols=197 Identities=14% Similarity=0.247 Sum_probs=157.3
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|.+++|+|++.+|++++.|++|++||+.. ++....+ .+|...|.+++|+|+++.+++++.|++|++||+. ...
T Consensus 76 ~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~--~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~~ 151 (343)
T 2xzm_R 76 NHFVSDLALSQENCFAISSSWDKTLRLWDLRT--GTTYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-GEC 151 (343)
T ss_dssp SSCEEEEEECSSTTEEEEEETTSEEEEEETTS--SCEEEEE-ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-SCE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CcEEEEE-cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-CCc
Confidence 34599999999999999999999999999954 5555555 4899999999999999999999999999999986 211
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC----------CeEEEEEeCCCeEEEEeCCCCCce
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG----------RYLASASYESSSFTIWDVAQGLGT 248 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g----------~~l~~~~~d~g~i~iwd~~~~~~~ 248 (350)
... .....+|. ..|.+++|+|++ .+|++++.| |+|++||.......
T Consensus 152 ~~~----------------------~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~ 207 (343)
T 2xzm_R 152 KFS----------------------SAEKENHS-DWVSCVRYSPIMKSANKVQPFAPYFASVGWD-GRLKVWNTNFQIRY 207 (343)
T ss_dssp EEE----------------------CCTTTSCS-SCEEEEEECCCCCSCSCCCSSCCEEEEEETT-SEEEEEETTTEEEE
T ss_pred eee----------------------eecccCCC-ceeeeeeeccccccccccCCCCCEEEEEcCC-CEEEEEcCCCceeE
Confidence 100 01122454 689999999987 689999999 79999995543334
Q ss_pred eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCc-eeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 018806 249 PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT-SEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSI 323 (350)
Q Consensus 249 ~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~ 323 (350)
.+..|...|.+++|+|+|++|++++.|+.|++||+.... ......+...|.+++|+|++++|+++.++.+.+|.+
T Consensus 208 ~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 208 TFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNL 283 (343)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEES
T ss_pred EEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEe
Confidence 566788999999999999999999999999999995443 333444567799999999999998777776555544
No 26
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=3.5e-30 Score=232.25 Aligned_cols=201 Identities=12% Similarity=0.131 Sum_probs=158.4
Q ss_pred cCeeEEEEec-CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEee-CCCeEEEEecCCcEEEEecCCCC
Q 018806 100 VDLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 100 ~~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
..|++++||| ++++||+|+.||.|+|||+...+..... ...+|.+.|++++|+| ++..|++++.|++|++||++..
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~- 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN- 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC-
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC-
Confidence 4699999999 5679999999999999999754333222 2347999999999998 5678888888999999998722
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCe
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
.... ......+ ...+.+++|+|++++|++++.| |.|++||++......+..|...|
T Consensus 198 ~~~~----------------------~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d-g~i~~wd~~~~~~~~~~~h~~~v 253 (435)
T 4e54_B 198 ILRV----------------------FASSDTI-NIWFCSLDVSASSRMVVTGDNV-GNVILLNMDGKELWNLRMHKKKV 253 (435)
T ss_dssp EEEE----------------------EECCSSC-SCCCCCEEEETTTTEEEEECSS-SBEEEEESSSCBCCCSBCCSSCE
T ss_pred ceeE----------------------EeccCCC-CccEEEEEECCCCCEEEEEeCC-CcEeeeccCcceeEEEecccceE
Confidence 1111 1111122 2467899999999999999999 79999999876666677889999
Q ss_pred EEEEEcCCCC-EEEEEecCCeEEEEeCCCCcee----ccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeC
Q 018806 258 SILKWSPTGD-YFFAAKFDGTFYLWETNTWTSE----PWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 258 ~~~~~sp~g~-~l~~~~~d~~v~iwd~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~ 326 (350)
.+++|+|+++ +|++++.|+.|++||+++.+.. ....|...|++++|+|+|++|++++ ++.+.+|.+..+
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 9999999986 6788999999999999887652 2347889999999999999999988 555666555433
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=7.6e-29 Score=217.42 Aligned_cols=193 Identities=19% Similarity=0.270 Sum_probs=161.7
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~~ 176 (350)
...|.+++|+|+++.|++++.|++|++||+.. ++....+ .+|...|.+++|+|+ +..+++++.|+.|++||++..
T Consensus 154 ~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~--~~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~ 230 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTASGDGTCALWDVES--GQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230 (354)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTT--CCEEEEE-ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC--CeEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 44699999999999999999999999999954 5555555 489999999999874 568888888999999999843
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec---
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG--- 253 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~--- 253 (350)
. +...+.+|. ..|.+++|+|+++.|++++.| |+|++||++.+........
T Consensus 231 ~-------------------------~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D-~~v~lwd~~~~~~~~~~~~~~~ 283 (354)
T 2pbi_B 231 Q-------------------------CVQAFETHE-SDVNSVRYYPSGDAFASGSDD-ATCRLYDLRADREVAIYSKESI 283 (354)
T ss_dssp C-------------------------EEEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEEEECCTTC
T ss_pred c-------------------------EEEEecCCC-CCeEEEEEeCCCCEEEEEeCC-CeEEEEECCCCcEEEEEcCCCc
Confidence 3 234466675 799999999999999999999 6999999998866554433
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEE
Q 018806 254 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLG 321 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~ 321 (350)
...+.+++|+|+|++|++++.|+.|++||+.+++. ..+.+|...|++++|+|+|++|++++ ++.+.+|
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 24688999999999999999999999999988876 45678999999999999999999987 4434443
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=3e-29 Score=233.95 Aligned_cols=240 Identities=20% Similarity=0.306 Sum_probs=181.7
Q ss_pred hhhhhhhhhhccccccCCCCcCCCC-----------------------ccCeeEEEEecCCCEEEEEECCCeEEEEEccC
Q 018806 74 FSTLHGIISHSIKPLLHPDHVHLLP-----------------------EVDLQGVSWHQHKHIVAFISGSTQVIVRDYED 130 (350)
Q Consensus 74 ~~~~~gh~~~~~~~~~~p~~~~~~~-----------------------~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~ 130 (350)
...+.||...+....+.|+...++. ...|.+++|+|+|++|++++.|+.+++|+..
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~- 374 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN- 374 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-
Confidence 4456677777666666665333221 2368999999999999999999999999963
Q ss_pred CCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCC----------Cc
Q 018806 131 SEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPG----------TR 200 (350)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 200 (350)
++....+ .+|...|.+++|+|+++.+++++.|+.|++||.. .+....+ ......+..+.++++ +.
T Consensus 375 --~~~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 375 --GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp --CCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred --CCEEEEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 4444444 4799999999999999999999999999999965 2222222 222233333444333 33
Q ss_pred eEEe-------eeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEe
Q 018806 201 WTLV-------DFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAK 273 (350)
Q Consensus 201 ~~~~-------~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 273 (350)
+.++ ..+.+|. ..|.+++|+|++++|++++.| |+|++||........+..|...|.+++|+|+|++|++++
T Consensus 450 v~~w~~~~~~~~~~~~~~-~~v~~~~~spd~~~las~~~d-~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 450 VKLWNRNGQLLQTLTGHS-SSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EEEEETTSCEEEEEECCS-SCEEEEEECTTSCEEEEEETT-SEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEECCCCEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCC-CEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 3333 3556775 799999999999999999999 699999975444455667889999999999999999999
Q ss_pred cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEE
Q 018806 274 FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLG 321 (350)
Q Consensus 274 ~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~ 321 (350)
.|+.|++||........+.+|...|++++|+|||++|++++ |+.+.+|
T Consensus 528 ~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 528 DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 99999999975444467789999999999999999999887 4444443
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.1e-29 Score=214.50 Aligned_cols=198 Identities=12% Similarity=0.145 Sum_probs=163.5
Q ss_pred eeEEEEecCC-CEEEEEECCCeEEEEEccCCCCC--ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 102 LQGVSWHQHK-HIVAFISGSTQVIVRDYEDSEGK--DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 102 V~~v~~sp~g-~~la~~s~d~~i~iw~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
|++++|+|++ ++|++|+.|++|++|++...... .......+|...|.+++|+|+++.+++++.|++|++||+..+.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~- 98 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE- 98 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC-
Confidence 9999999965 89999999999999998632221 1122335899999999999999999999999999999998432
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeE
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLS 258 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~ 258 (350)
....+.+|. ..|.+++|+|++++|++++.| |+|++||++......+..|...+.
T Consensus 99 ------------------------~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D-~~i~vwd~~~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 99 ------------------------TYQRFVGHK-SDVMSVDIDKKASMIISGSRD-KTIKVWTIKGQCLATLLGHNDWVS 152 (319)
T ss_dssp ------------------------EEEEEECCS-SCEEEEEECTTSCEEEEEETT-SCEEEEETTSCEEEEECCCSSCEE
T ss_pred ------------------------eeEEEccCC-CcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCeEEEEeccCCcEE
Confidence 244567776 799999999999999999999 699999998766666778889999
Q ss_pred EEEEcCC------CCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 259 ILKWSPT------GDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 259 ~~~~sp~------g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+++|+|. +..|++++.|+.|++||+++++. ..+.+|...|.+++|+|+|++|++++.+ ..+..|++..
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d-g~i~iwd~~~ 227 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD-GEIMLWNLAA 227 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT-CEEEEEETTT
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCC
Confidence 9999985 44899999999999999998876 4567899999999999999999988733 2455555543
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=1.3e-29 Score=222.64 Aligned_cols=225 Identities=15% Similarity=0.215 Sum_probs=162.6
Q ss_pred CCCccCeeEEEEecCCCEEEEEEC------CCeEEEEEccCCCCC-ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcE
Q 018806 96 LLPEVDLQGVSWHQHKHIVAFISG------STQVIVRDYEDSEGK-DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGI 168 (350)
Q Consensus 96 ~~~~~~V~~v~~sp~g~~la~~s~------d~~i~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v 168 (350)
..+...|++++|||||++||+++. |+.+++|+....... .......+|...|.+++|+|+ +.+++++.|++|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d-~~~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE-KGILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT-TEEEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC-CCEEEEECCCEE
Confidence 345667999999999999999997 778888887432211 111222358889999999999 578888889999
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT 248 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~ 248 (350)
+|||+..++..... .....+|. ..|++++|+|++++|++++.| |+|++||+++++..
T Consensus 118 ~lWd~~~~~~~~~~---------------------~~~~~~h~-~~V~~v~~spdg~~l~sgs~d-g~v~iwd~~~~~~~ 174 (357)
T 4g56_B 118 ELWEILEKESLLVN---------------------KFAKYEHD-DIVKTLSVFSDGTQAVSGGKD-FSVKVWDLSQKAVL 174 (357)
T ss_dssp EEC--------CCC---------------------CEEECCCS-SCEEEEEECSSSSEEEEEETT-SCEEEEETTTTEEE
T ss_pred EEeeccccceeEEE---------------------eeccCCCC-CCEEEEEECCCCCEEEEEeCC-CeEEEEECCCCcEE
Confidence 99999854332111 11134564 799999999999999999999 69999999998766
Q ss_pred e-eeecCCCeEEEEEcCCCC-EEEEEecCCeEEEEeCCCCceec---cccCCCCeEEEEEcCCC-CEEEEEECCCeEEEE
Q 018806 249 P-IRRGFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTSEP---WSSTSGFVTGATWDPEG-RMILLAFAGSLTLGS 322 (350)
Q Consensus 249 ~-~~~~~~~v~~~~~sp~g~-~l~~~~~d~~v~iwd~~~~~~~~---~~~~~~~v~~~~~s~~g-~~l~~~~~~~~~~~~ 322 (350)
. +..|...|.+++|+|++. ++++++.|+.|++||+++++... ...+...+.+++|+|++ .+|++++. +..+..
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~-d~~i~~ 253 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE-TGNVSL 253 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES-SSCEEE
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec-ccceeE
Confidence 5 446789999999999875 68899999999999999987643 34567789999999986 45666552 234444
Q ss_pred EEeCC--CCCCCceeecccccceee
Q 018806 323 IHFAS--KPPSLDAHLLPVDLPDIV 345 (350)
Q Consensus 323 ~~~~~--~~~~~~~~~~~v~~~~~~ 345 (350)
|++.. ....+.+|..+|....+.
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~s 278 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYS 278 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEEC
T ss_pred EECCCCcEeEEEeccceeEEEEEEc
Confidence 55443 333666787777766554
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.8e-30 Score=227.43 Aligned_cols=222 Identities=16% Similarity=0.203 Sum_probs=166.9
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
..+|++++|+|++++||+++.|+.|+||++..........+ .+|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 34699999999999999999999999999964211333333 57999999999999999999999999999999985431
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCC----ceeeee-c
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGL----GTPIRR-G 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~----~~~~~~-~ 253 (350)
.. ....+.+|. ..|.+++|+|++++|++++.| |.|++||+++++ ...+.. |
T Consensus 90 ~~----------------------~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~h 145 (377)
T 3dwl_C 90 WK----------------------QTLVLLRLN-RAATFVRWSPNEDKFAVGSGA-RVISVCYFEQENDWWVSKHLKRPL 145 (377)
T ss_dssp CC----------------------CEEECCCCS-SCEEEEECCTTSSCCEEEESS-SCEEECCC-----CCCCEEECSSC
T ss_pred ee----------------------eeeEecccC-CceEEEEECCCCCEEEEEecC-CeEEEEEECCcccceeeeEeeccc
Confidence 11 123355565 799999999999999999999 699999999886 234455 7
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCC------------------ceeccccCCCCeEEEEEcCCCCEEEEEE-
Q 018806 254 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW------------------TSEPWSSTSGFVTGATWDPEGRMILLAF- 314 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~- 314 (350)
...|.+++|+|++++|++++.|+.|++||++.. +......|...|.+++|+|+|++|++++
T Consensus 146 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 146 RSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred CCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 899999999999999999999999999999632 2222228889999999999999999887
Q ss_pred CCCeEEEEEEeCCC----CCCCceeecccccceee
Q 018806 315 AGSLTLGSIHFASK----PPSLDAHLLPVDLPDIV 345 (350)
Q Consensus 315 ~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~ 345 (350)
++.+.+|.+..... ...+.+|..+|....+.
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 44455555554444 34667788777766554
No 32
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.1e-28 Score=211.20 Aligned_cols=199 Identities=17% Similarity=0.300 Sum_probs=156.1
Q ss_pred cCeeEEEEecC--CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCC
Q 018806 100 VDLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 100 ~~V~~v~~sp~--g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~ 175 (350)
..|++++|+++ +++||+++.|++|+|||+..........+ ..|...|.+++|+|+ +..+++++.|++|++||+..
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 34999999864 89999999999999999964322233333 478999999999997 77888888899999999974
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-------------CCeEEEEEeCCCeEEEEeC
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-------------GRYLASASYESSSFTIWDV 242 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-------------g~~l~~~~~d~g~i~iwd~ 242 (350)
..... ...+.+|. ..|.+++|+|+ +++|++++.| |+|++||+
T Consensus 133 ~~~~~-----------------------~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-~~v~lwd~ 187 (297)
T 2pm7_B 133 NGTTS-----------------------PIIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-NLVKIWKY 187 (297)
T ss_dssp SSCBC-----------------------CEEEECCS-SCEEEEEECCCC------------CCEEEEEETT-SCEEEEEE
T ss_pred CCcee-----------------------eeeeeccc-CccceEeecCCcccccccCCCCCCcceEEEEcCC-CcEEEEEE
Confidence 32211 11245565 68999999997 5789999999 69999999
Q ss_pred CCCCc----e-eeeecCCCeEEEEEcCCC---CEEEEEecCCeEEEEeCCCCce----ecc--ccCCCCeEEEEEcCCCC
Q 018806 243 AQGLG----T-PIRRGFGGLSILKWSPTG---DYFFAAKFDGTFYLWETNTWTS----EPW--SSTSGFVTGATWDPEGR 308 (350)
Q Consensus 243 ~~~~~----~-~~~~~~~~v~~~~~sp~g---~~l~~~~~d~~v~iwd~~~~~~----~~~--~~~~~~v~~~~~s~~g~ 308 (350)
+++.. . .+..|...|.+++|+|++ ++|++++.|++|+|||+++... ..+ ..|...|.+++|+|+|+
T Consensus 188 ~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC
Confidence 87652 2 345688999999999985 8899999999999999987531 122 46778899999999999
Q ss_pred EEEEEE-CCCeEEEEEE
Q 018806 309 MILLAF-AGSLTLGSIH 324 (350)
Q Consensus 309 ~l~~~~-~~~~~~~~~~ 324 (350)
+|++++ ++.+.+|...
T Consensus 268 ~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 268 VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEC
Confidence 999887 5555555543
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.2e-28 Score=214.50 Aligned_cols=207 Identities=14% Similarity=0.234 Sum_probs=153.3
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCC-ceeEecCCCCCCeeEEEEee--CCCeEEEEecCCcEEEEecCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGK-DACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
..|++++|+|++++||+++.||.|++|++...... .......+|...|.+++|+| ++..+++++.|+.|++||+...
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 45999999999999999999999999999743322 12223347999999999999 5788888889999999999854
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC--CCeEEEEEeCCCeEEEEeCCCCC--------
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD--GRYLASASYESSSFTIWDVAQGL-------- 246 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~d~g~i~iwd~~~~~-------- 246 (350)
..... ...+.....+..|. ..|.+++|+|+ +++|++++.| |.|++||+++++
T Consensus 92 ~~~~~----------------~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 92 QEECS----------------GRRWNKLCTLNDSK-GSLYSVKFAPAHLGLKLACLGND-GILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp SCTTS----------------SCSEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETT-CEEEEEECSSTTCTTCCEEE
T ss_pred ccccc----------------ccCcceeeeecccC-CceeEEEEcCCCCCcEEEEecCC-CcEEEecCCChHHhcccccc
Confidence 32110 01223344455554 57777777777 7777777777 577777765442
Q ss_pred --------------------------------------------------c---eeeeecCCCeEEEEEcCCC----CEE
Q 018806 247 --------------------------------------------------G---TPIRRGFGGLSILKWSPTG----DYF 269 (350)
Q Consensus 247 --------------------------------------------------~---~~~~~~~~~v~~~~~sp~g----~~l 269 (350)
. ..+..|...|.+++|+|++ ++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 1 1122467789999999998 899
Q ss_pred EEEecCCeEEEEeCCCCc----------------------------------------------e-eccccCCCCeEEEE
Q 018806 270 FAAKFDGTFYLWETNTWT----------------------------------------------S-EPWSSTSGFVTGAT 302 (350)
Q Consensus 270 ~~~~~d~~v~iwd~~~~~----------------------------------------------~-~~~~~~~~~v~~~~ 302 (350)
++++.||.|++||++++. . ..+..|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 999999999999998741 1 23457889999999
Q ss_pred EcCCCCEEEEEE-CCCeEEEEEE
Q 018806 303 WDPEGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 303 ~s~~g~~l~~~~-~~~~~~~~~~ 324 (350)
|+|+|++|++++ ++.+.+|.+.
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEEC
T ss_pred EcCCCCEEEEecCCCcEEEEecC
Confidence 999999999888 5445555444
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.3e-28 Score=219.01 Aligned_cols=197 Identities=19% Similarity=0.267 Sum_probs=161.5
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecC-----------------CCCCCeeEEEEeeCCCeEE
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTS-----------------DSQRDVKVLEWRPNGGRSL 160 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~-----------------~~~~~v~~~~~sp~~~~l~ 160 (350)
+...|.+++|+|||++||+++ ++.++||++.. +.....+.. .+...|.+++|+|+|+.++
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~--g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD--GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT--CCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecC--CCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 455799999999999999976 68899999954 544444321 1122489999999999999
Q ss_pred EEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEE
Q 018806 161 SVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIW 240 (350)
Q Consensus 161 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iw 240 (350)
+++.|+.|++||+.... ....+.+|. ..|.+++|+|++++|++++.| |+|++|
T Consensus 140 s~~~d~~i~iwd~~~~~-------------------------~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-~~v~iw 192 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRK-------------------------IVMILQGHE-QDIYSLDYFPSGDKLVSGSGD-RTVRIW 192 (393)
T ss_dssp EEETTSCEEEEETTTTE-------------------------EEEEECCCS-SCEEEEEECTTSSEEEEEETT-SEEEEE
T ss_pred EEcCCCeEEEEECCCCc-------------------------EEEEEccCC-CCEEEEEEcCCCCEEEEecCC-CcEEEE
Confidence 99999999999997332 244567776 799999999999999999999 699999
Q ss_pred eCCCCCceeeeecCCCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCCceec-c-------ccCCCCeEEEEEcCCCCEEE
Q 018806 241 DVAQGLGTPIRRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEP-W-------SSTSGFVTGATWDPEGRMIL 311 (350)
Q Consensus 241 d~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~~~-~-------~~~~~~v~~~~~s~~g~~l~ 311 (350)
|+++++......+...+.+++|+| ++++|++++.|+.|++||+++++... + ..|...|.+++|+|+|++|+
T Consensus 193 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 272 (393)
T 1erj_A 193 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 272 (393)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred ECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE
Confidence 999998777777788999999999 89999999999999999999987632 2 46888999999999999999
Q ss_pred EEE-CCCeEEEEEE
Q 018806 312 LAF-AGSLTLGSIH 324 (350)
Q Consensus 312 ~~~-~~~~~~~~~~ 324 (350)
+++ ++.+.+|.++
T Consensus 273 s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 273 SGSLDRSVKLWNLQ 286 (393)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEECC
Confidence 887 5545555544
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.2e-28 Score=229.93 Aligned_cols=237 Identities=19% Similarity=0.273 Sum_probs=181.3
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|.+++|+|++++|++++.|+.|++|+.. +.....+ .+|...|.+++|+|+++.+++++.|+.+++||.. ....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~---~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~ 378 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRN---GQHLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLL 378 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCC---CCeeEEE-eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEE
Confidence 379999999999999999999999999975 3334444 5789999999999999999888889999999965 2222
Q ss_pred ceeecccccccceecCCCC----------CceEE-------eeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 180 ASVRSGAASFLGALSRGPG----------TRWTL-------VDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~----------~~~~~-------~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
..+ ......+..+.++++ +.+.+ ...+.+|. ..|++++|+|++++|++++.| |+|++||.
T Consensus 379 ~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d-~~v~~w~~ 455 (577)
T 2ymu_A 379 QTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-SSVWGVAFSPDDQTIASASDD-KTVKLWNR 455 (577)
T ss_dssp EEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEETT-SEEEEEET
T ss_pred EEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCC-CCeEEEEECCCCCEEEEEcCC-CEEEEEEC
Confidence 222 222223333333333 33333 34566775 799999999999999999999 69999998
Q ss_pred CCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 018806 243 AQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 243 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~ 322 (350)
.......+..|...+.+++|+|++++|++++.|+.|++||........+..|...|++++|+|+|++|++++.+. .+..
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg-~v~l 534 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK-TVKL 534 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS-EEEE
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC-EEEE
Confidence 655555677788999999999999999999999999999975444467889999999999999999999887432 4444
Q ss_pred EEeCCCC-CCCceeecccccceee
Q 018806 323 IHFASKP-PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 323 ~~~~~~~-~~~~~~~~~v~~~~~~ 345 (350)
|+..... ..+.+|..+|....+.
T Consensus 535 wd~~~~~~~~~~~h~~~v~~~~fs 558 (577)
T 2ymu_A 535 WNRNGQLLQTLTGHSSSVWGVAFS 558 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEEC
T ss_pred EeCCCCEEEEEcCCCCCEEEEEEc
Confidence 4443322 2566888888766654
No 36
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.2e-28 Score=217.11 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=152.0
Q ss_pred cCeeEEEEecCCCEEEEEE--CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFIS--GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s--~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
..+++++|||||++||+++ .|++|+|||+.. ++....+ .|...|.+++|+|||+.+++++ ++.+++|+...+.
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~--~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEI--ETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGS 208 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEE--ECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCC
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEe--CCCCceEEEEEccCCceEEecc-ceeEEEEEeccCc
Confidence 3589999999999987665 689999999954 5555554 4778899999999976665554 6667777766333
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC---eEEEEeCCCCCce-----e
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS---SFTIWDVAQGLGT-----P 249 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g---~i~iwd~~~~~~~-----~ 249 (350)
.. .......|. ..|.+++|+|+++.+++++.+++ .+++|++...... .
T Consensus 209 ~~-----------------------~~~~~~~~~-~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 209 CI-----------------------ARKTDFDKN-WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp EE-----------------------EEECCCCTT-EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred ce-----------------------eeeecCCCC-CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee
Confidence 21 112233444 68999999999999999998832 6888998776532 2
Q ss_pred eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec--cccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 250 IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 250 ~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+..|...|.+++|+|||++||+|+.|++|+|||+++++... +.+|...|++++|||||++|++++.+ ..+..|++.
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D-~tvrvw~ip 342 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA-NTIHIIKLP 342 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT-SEEEEEECC
T ss_pred ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC-CeEEEEEcC
Confidence 44577899999999999999999999999999999998743 45899999999999999999988732 244445543
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=4.1e-28 Score=227.89 Aligned_cols=218 Identities=17% Similarity=0.218 Sum_probs=169.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...+.+++|+|||++||+++ ++.+++|++.. +.....+ .+|...|++++|+|+|+++++++.|++|+|||+.....
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~--~~~~~~~-~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS--LTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTC--SSCCEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCC--cccCeEe-cCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc
Confidence 44678899999999999987 56999999953 4444544 58999999999999999999999999999999864333
Q ss_pred Cc-eeecccccccceecCCCCCceE--------------Ee------eeccCCCCCceeeEEECCCCC-eEEEEEeCCCe
Q 018806 179 AA-SVRSGAASFLGALSRGPGTRWT--------------LV------DFLRSQNGEQITALSWGPDGR-YLASASYESSS 236 (350)
Q Consensus 179 ~~-~~~~~~~~~~~~~~~~~~~~~~--------------~~------~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~g~ 236 (350)
.. .........+..++++++++.. ++ ..+.+|. ..|.+++|+|++. .|++++.| ++
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~-~~v~~v~f~p~~~~~l~s~s~D-~~ 171 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA-RAMNSVDFKPSRPFRIISGSDD-NT 171 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCS-SCEEEEEECSSSSCEEEEEETT-SC
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCC-CCceEEEECCCCCeEEEEEeCC-Ce
Confidence 21 1122233344555555554322 22 2456776 7999999999987 58999999 69
Q ss_pred EEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-cc-------cCCCCeEEEEEcCCC
Q 018806 237 FTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WS-------STSGFVTGATWDPEG 307 (350)
Q Consensus 237 i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~~-------~~~~~v~~~~~s~~g 307 (350)
|++||..+++... +..|...|.+++|+|+|++|++++.|++|++||+.+++... +. .|...|.+++|+|+|
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 9999998876544 45688999999999999999999999999999999887743 31 689999999999999
Q ss_pred CEEEEEE-CCCeEEEE
Q 018806 308 RMILLAF-AGSLTLGS 322 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~ 322 (350)
++|++++ ++.+.+|+
T Consensus 252 ~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 252 TKIASASADKTIKIWN 267 (611)
T ss_dssp SEEEEEETTSEEEEEE
T ss_pred CEEEEEeCCCeEEEEe
Confidence 9999887 44344443
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-28 Score=215.24 Aligned_cols=199 Identities=16% Similarity=0.273 Sum_probs=163.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
.|++++|+|++++||+++.||.|+||++...+......+ .+|...|++++|+|+ +..+++++.|+.|++||+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~- 90 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR- 90 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE-
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc-
Confidence 499999999999999999999999999974344444444 579999999999977 7889999999999999998322
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC--CCeEEEEEeCCCeEEEEeCCCCCc---eeeeec
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD--GRYLASASYESSSFTIWDVAQGLG---TPIRRG 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~d~g~i~iwd~~~~~~---~~~~~~ 253 (350)
+.....+..|. ..|.+++|+|+ +++|++++.| |.|++||++.+.. ..+..|
T Consensus 91 ----------------------~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~~~~~~~~ 146 (379)
T 3jrp_A 91 ----------------------WSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASSD-GKVSVVEFKENGTTSPIIIDAH 146 (379)
T ss_dssp ----------------------EEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETT-SEEEEEECCTTSCCCEEEEECC
T ss_pred ----------------------eeEeeeecCCC-cceEEEEeCCCCCCCEEEEecCC-CcEEEEecCCCCceeeEEecCC
Confidence 22344456665 79999999999 9999999999 6999999998743 234567
Q ss_pred CCCeEEEEEcC-------------CCCEEEEEecCCeEEEEeCCCCce-----eccccCCCCeEEEEEcCC---CCEEEE
Q 018806 254 FGGLSILKWSP-------------TGDYFFAAKFDGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPE---GRMILL 312 (350)
Q Consensus 254 ~~~v~~~~~sp-------------~g~~l~~~~~d~~v~iwd~~~~~~-----~~~~~~~~~v~~~~~s~~---g~~l~~ 312 (350)
...+.+++|+| ++++|++++.|+.|++||+++++. ..+..|...|.+++|+|+ +++|++
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 88999999999 699999999999999999987653 245578999999999999 888888
Q ss_pred EE-CCCeEEEEEEe
Q 018806 313 AF-AGSLTLGSIHF 325 (350)
Q Consensus 313 ~~-~~~~~~~~~~~ 325 (350)
++ ++.+.+|.++.
T Consensus 227 ~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 227 VSQDRTCIIWTQDN 240 (379)
T ss_dssp EETTSCEEEEEESS
T ss_pred EeCCCEEEEEeCCC
Confidence 87 55555555443
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-28 Score=210.34 Aligned_cols=203 Identities=18% Similarity=0.292 Sum_probs=153.9
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCC----CCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEec
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSE----GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAP 173 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~ 173 (350)
+...|++++|+|++++||+++.|++|+||++.... .........+|...|.+++|+|+++.|++++.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 34569999999999999999999999999985321 11122333589999999999999999999999999999999
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCC--ce-ee
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGL--GT-PI 250 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~--~~-~~ 250 (350)
...+. .+.+...+.+|. ..|.+++|+|++++|++++.| |+|++||..++. +. .+
T Consensus 137 ~~~~~---------------------~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D-~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 137 DESGE---------------------EYECISVLQEHS-QDVKHVIWHPSEALLASSSYD-DTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp CTTCC---------------------CCEEEEEECCCS-SCEEEEEECSSSSEEEEEETT-SCEEEEEEETTEEEEEEEE
T ss_pred cCCCC---------------------CeEEEEEeccCC-CceEEEEECCCCCEEEEEcCC-CeEEEEECCCCCeeEEEEc
Confidence 53221 122345577776 699999999999999999999 699999987763 32 34
Q ss_pred eecCCCeEEEEEcCC--CCEEEEEecCCeEEEEeCCCCc--------e-ecccc-CCCCeEEEEEcCCCCEEEEEE-CCC
Q 018806 251 RRGFGGLSILKWSPT--GDYFFAAKFDGTFYLWETNTWT--------S-EPWSS-TSGFVTGATWDPEGRMILLAF-AGS 317 (350)
Q Consensus 251 ~~~~~~v~~~~~sp~--g~~l~~~~~d~~v~iwd~~~~~--------~-~~~~~-~~~~v~~~~~s~~g~~l~~~~-~~~ 317 (350)
..|...|.+++|+|+ +.+|++++.|++|++||++++. . ..+.. |...|.+++|++++ +|++++ ++.
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~ 272 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV 272 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE
Confidence 568899999999998 7789999999999999997642 1 12333 88899999999776 666666 655
Q ss_pred eEEEEEE
Q 018806 318 LTLGSIH 324 (350)
Q Consensus 318 ~~~~~~~ 324 (350)
+.+|...
T Consensus 273 v~iw~~~ 279 (330)
T 2hes_X 273 LAVYEEV 279 (330)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 6666543
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=2.3e-27 Score=205.78 Aligned_cols=218 Identities=13% Similarity=0.139 Sum_probs=177.2
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
+...|.+++|+|++++|++++.|+.|++|++..........+ ..|...|.+++|+|+++.+++++.|+.|++||+....
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec-ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 345799999999999999999999999999965332233333 4788899999999998889988899999999998432
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCe
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
....+..|. ..+.+++|+|++++|++++.+ |.|++||+++++......+...+
T Consensus 175 -------------------------~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~v 227 (337)
T 1gxr_A 175 -------------------------LVRQFQGHT-DGASCIDISNDGTKLWTGGLD-NTVRSWDLREGRQLQQHDFTSQI 227 (337)
T ss_dssp -------------------------EEEEECCCS-SCEEEEEECTTSSEEEEEETT-SEEEEEETTTTEEEEEEECSSCE
T ss_pred -------------------------eeeeeeccc-CceEEEEECCCCCEEEEEecC-CcEEEEECCCCceEeeecCCCce
Confidence 233455665 689999999999999999999 69999999999887777788999
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCCC-CCceee
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP-SLDAHL 336 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 336 (350)
.+++|+|++++|++++.++.|++||+++++...+..|...|.+++|+|++++|++++.+ ..+..|++..... ....|.
T Consensus 228 ~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~~~~~~~~~~~~~ 306 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD-NLLNAWRTPYGASIFQSKES 306 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEECS
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC-CcEEEEECCCCeEEEEecCC
Confidence 99999999999999999999999999999888888899999999999999999988743 3566666654332 222455
Q ss_pred ccccccee
Q 018806 337 LPVDLPDI 344 (350)
Q Consensus 337 ~~v~~~~~ 344 (350)
.++....+
T Consensus 307 ~~v~~~~~ 314 (337)
T 1gxr_A 307 SSVLSCDI 314 (337)
T ss_dssp SCEEEEEE
T ss_pred CcEEEEEE
Confidence 55544443
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=7.1e-28 Score=213.42 Aligned_cols=210 Identities=14% Similarity=0.152 Sum_probs=163.0
Q ss_pred ccCeeEEEEecCC-CEEEEEECCCeEEEEEccCCCCCceeEec-CCCCCCeeEEEEee-CCCeEEEEecCCcEEEEecCC
Q 018806 99 EVDLQGVSWHQHK-HIVAFISGSTQVIVRDYEDSEGKDACILT-SDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 99 ~~~V~~v~~sp~g-~~la~~s~d~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~iwd~~~ 175 (350)
...|++++|+|++ ++||+|+.|+.|+|||+.. +.....+. .+|...|.+++|+| ++..+++++.|+.|++||+..
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV--QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS--TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC--cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 4569999999999 9999999999999999964 44444443 36999999999999 667777788899999999982
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCC
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFG 255 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~ 255 (350)
..... ......+. ..|.+++|+|++++|++++.| |.|++||++......+..|..
T Consensus 151 -~~~~~----------------------~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 151 -SVIQV----------------------FAKTDSWD-YWYCCVDVSVSRQMLATGDST-GRLLLLGLDGHEIFKEKLHKA 205 (383)
T ss_dssp -CEEEE----------------------EECCCCSS-CCEEEEEEETTTTEEEEEETT-SEEEEEETTSCEEEEEECSSS
T ss_pred -CceEE----------------------EeccCCCC-CCeEEEEECCCCCEEEEECCC-CCEEEEECCCCEEEEeccCCC
Confidence 21111 11122332 679999999999999999999 699999996544455667889
Q ss_pred CeEEEEEcCCCC-EEEEEecCCeEEEEeCCC----CceeccccCCCCeEEEEEcC-CCCEEEEEE-CCCeEEEEEEeCCC
Q 018806 256 GLSILKWSPTGD-YFFAAKFDGTFYLWETNT----WTSEPWSSTSGFVTGATWDP-EGRMILLAF-AGSLTLGSIHFASK 328 (350)
Q Consensus 256 ~v~~~~~sp~g~-~l~~~~~d~~v~iwd~~~----~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~-~~~~~~~~~~~~~~ 328 (350)
.|.+++|+|+++ +|++++.|+.|++||+++ ++......|...|.+++|+| +|++|++++ ++.+.+|.++....
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 999999999999 899999999999999998 44555557999999999999 999999887 44444444433333
Q ss_pred CCCCcee
Q 018806 329 PPSLDAH 335 (350)
Q Consensus 329 ~~~~~~~ 335 (350)
...+..|
T Consensus 286 ~~~~~~~ 292 (383)
T 3ei3_B 286 PDQIIIH 292 (383)
T ss_dssp CSEEEEC
T ss_pred ccccccc
Confidence 3333333
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=1.5e-27 Score=210.16 Aligned_cols=225 Identities=12% Similarity=0.161 Sum_probs=170.9
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
+..+|++++|+|++++|++++.|+.|++|++..........+ .+|...|.+++|+|+++.+++++.|+.|++||+....
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 355799999999999999999999999999964211144444 4799999999999999999999999999999997443
Q ss_pred CCceee-cccccccceecCC----------CCCceEEee-----------ec-cCCCCCceeeEEECCCCCeEEEEEeCC
Q 018806 178 NAASVR-SGAASFLGALSRG----------PGTRWTLVD-----------FL-RSQNGEQITALSWGPDGRYLASASYES 234 (350)
Q Consensus 178 ~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~-----------~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~ 234 (350)
...... ......+..+.+. .++.+.+++ .+ ..| ...|.+++|+|++++|++++.|
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d- 163 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI-RSTVLSLDWHPNSVLLAAGSCD- 163 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC-CSCEEEEEECTTSSEEEEEETT-
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc-CCCeeEEEEcCCCCEEEEEcCC-
Confidence 221111 1111222222222 233333322 22 334 4789999999999999999999
Q ss_pred CeEEEEeCC------------------CCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccC
Q 018806 235 SSFTIWDVA------------------QGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSST 294 (350)
Q Consensus 235 g~i~iwd~~------------------~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~ 294 (350)
|.|++||++ .++... +..|...+.+++|+|++++|++++.|+.|++||+++++. ..+..|
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 699999964 344433 335778899999999999999999999999999998887 456678
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 295 SGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 295 ~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
...|.+++|+|++++|+++.++.+.+|.+.-
T Consensus 244 ~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 244 TLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp SCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 8899999999999999988677777777765
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3e-27 Score=207.55 Aligned_cols=239 Identities=15% Similarity=0.158 Sum_probs=180.9
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|++++|+|++++|++++.|+.|++||+.. ++....+ .+|...|.+++|+|+++.+++++.|+.|++||+.......
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLN--GERLGTL-DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTT--CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--chhhhhh-hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 499999999999999999999999999854 5555555 5799999999999999999999999999999998665444
Q ss_pred eeecccccccceecCCCC---------------CceEEeeec-------------------cCCC-CCceeeEEECCCCC
Q 018806 181 SVRSGAASFLGALSRGPG---------------TRWTLVDFL-------------------RSQN-GEQITALSWGPDGR 225 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-------------------~~~~-~~~v~~~~~sp~g~ 225 (350)
.+. ....+..+.+.++ +.+.+++.- ..+. ...+.+++|+|+++
T Consensus 111 ~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred Eee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 443 1222233333332 233333211 1121 01789999999999
Q ss_pred eEEEEEeCCCeEEEEeCCC-CCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEE
Q 018806 226 YLASASYESSSFTIWDVAQ-GLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATW 303 (350)
Q Consensus 226 ~l~~~~~d~g~i~iwd~~~-~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 303 (350)
+|++++.+ |.|++||+++ +.... +..|...+.+++|+|++++|++++.|+.|++||+++++......+...+..++|
T Consensus 189 ~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 267 (369)
T 3zwl_B 189 YIIAGHKD-GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVI 267 (369)
T ss_dssp EEEEEETT-SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred EEEEEcCC-CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEe
Confidence 99999999 7999999998 44443 445788999999999999999999999999999999988766668889999999
Q ss_pred cCCCCEEEEEECCCe-------------EEEEEEeCCCCC--CCceeecccccceee
Q 018806 304 DPEGRMILLAFAGSL-------------TLGSIHFASKPP--SLDAHLLPVDLPDIV 345 (350)
Q Consensus 304 s~~g~~l~~~~~~~~-------------~~~~~~~~~~~~--~~~~~~~~v~~~~~~ 345 (350)
+|+++++++++.... .+..|+...... .+.+|..+|....+.
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence 999999999874432 344444433322 445677777666554
No 44
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=9.5e-28 Score=228.79 Aligned_cols=222 Identities=12% Similarity=0.167 Sum_probs=176.7
Q ss_pred hhhhhhhhhhccccccCCCCcCCC-C-----------------------------ccCeeEEEEecCCCEEEEEECCCeE
Q 018806 74 FSTLHGIISHSIKPLLHPDHVHLL-P-----------------------------EVDLQGVSWHQHKHIVAFISGSTQV 123 (350)
Q Consensus 74 ~~~~~gh~~~~~~~~~~p~~~~~~-~-----------------------------~~~V~~v~~sp~g~~la~~s~d~~i 123 (350)
...+.||.+.+....+.|....++ . ...|++++|+|++++|++|+.|+.|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 456788988887776665533211 1 2258999999999999999999999
Q ss_pred EEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEE
Q 018806 124 IVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTL 203 (350)
Q Consensus 124 ~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (350)
+|||+.. +.....+ .+|...|.+++|+|+++.+++++.|++|++||.... .... +
T Consensus 455 ~vwd~~~--~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-~~~~---------------------~ 509 (694)
T 3dm0_A 455 RLWDLAA--GVSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-CKYT---------------------I 509 (694)
T ss_dssp EEEETTT--TEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-EEEE---------------------E
T ss_pred EEEECCC--CcceeEE-eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-ccee---------------------e
Confidence 9999954 5555554 489999999999999999999999999999997521 1111 1
Q ss_pred eeeccCCCCCceeeEEECCCC--CeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEE
Q 018806 204 VDFLRSQNGEQITALSWGPDG--RYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYL 280 (350)
Q Consensus 204 ~~~~~~~~~~~v~~~~~sp~g--~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 280 (350)
.....+|. ..|.+++|+|++ ..|++++.| |+|++||+++++... +..|.+.|.+++|+|+|++|++++.|+.|++
T Consensus 510 ~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~d-~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 510 SEGGEGHR-DWVSCVRFSPNTLQPTIVSASWD-KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLL 587 (694)
T ss_dssp CSSTTSCS-SCEEEEEECSCSSSCEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEE
T ss_pred ccCCCCCC-CcEEEEEEeCCCCcceEEEEeCC-CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 11134554 689999999987 578999999 699999999887654 4568899999999999999999999999999
Q ss_pred EeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 018806 281 WETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 281 wd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~ 322 (350)
||+++++......+...+.+++|+|++.+|+++.++.+.+|+
T Consensus 588 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 588 WDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp EETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred EECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence 999999886555666789999999999999888776544443
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=6.1e-27 Score=203.16 Aligned_cols=194 Identities=14% Similarity=0.132 Sum_probs=166.2
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|.+++|+|++++|++++.|+.|++||+.. ++....+ ..|...|.+++|+|+++.+++++.|+.|++||+......
T Consensus 142 ~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~--~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHN--QTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCC--Cceeeee-ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE
Confidence 3689999999999999999999999999953 4444444 478999999999999989999889999999999843221
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSI 259 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~ 259 (350)
..+. + ...+.+++|+|++++|++++.+ |.|++||+++++...+..|...+.+
T Consensus 219 -------------------------~~~~-~-~~~v~~~~~s~~~~~l~~~~~~-~~i~~~~~~~~~~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 219 -------------------------QQHD-F-TSQIFSLGYCPTGEWLAVGMES-SNVEVLHVNKPDKYQLHLHESCVLS 270 (337)
T ss_dssp -------------------------EEEE-C-SSCEEEEEECTTSSEEEEEETT-SCEEEEETTSSCEEEECCCSSCEEE
T ss_pred -------------------------eeec-C-CCceEEEEECCCCCEEEEEcCC-CcEEEEECCCCCeEEEcCCccceeE
Confidence 1122 2 3689999999999999999998 6999999999887777788899999
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEE
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~ 324 (350)
++|+|++++|++++.|+.|++||+++++......+...+.+++|+|++++|++++ ++.+.+|.+.
T Consensus 271 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9999999999999999999999999998876677889999999999999999887 5556666654
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.1e-28 Score=216.30 Aligned_cols=200 Identities=13% Similarity=0.129 Sum_probs=154.5
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|++++|++++.|+.|++||+..............|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 44699999999999999999999999999965321112333357999999999999999999999999999999984432
Q ss_pred CceeecccccccceecCCCCCceEEeeeccC-CCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC------------
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRS-QNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG------------ 245 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~------------ 245 (350)
. .+...+.+ |. ..|.+++|+|++++|++++.| |+|++||++..
T Consensus 135 ~----------------------~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 135 W----------------------WVSKHLKRPLR-STILSLDWHPNNVLLAAGCAD-RKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp C----------------------CCCEEECSSCC-SCEEEEEECTTSSEEEEEESS-SCEEEEEECCSSCC-CCCSCSSC
T ss_pred c----------------------eeeeEeecccC-CCeEEEEEcCCCCEEEEEeCC-CEEEEEEEEecccCCCccccccc
Confidence 1 11233455 54 799999999999999999999 69999998632
Q ss_pred ------CceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-----eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 246 ------LGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 246 ------~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
+......|...|.+++|+|+|++|++++.|+.|++||+++++. ..+..|...|.+++|+|+|++|++++
T Consensus 191 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 191 SRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp SCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred cccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 2222226778899999999999999999999999999999875 45668889999999999999999887
Q ss_pred CCCeEEEE
Q 018806 315 AGSLTLGS 322 (350)
Q Consensus 315 ~~~~~~~~ 322 (350)
++...+|.
T Consensus 271 ~~~~~~~~ 278 (377)
T 3dwl_C 271 NYSPILLQ 278 (377)
T ss_dssp SSSEEEEC
T ss_pred CCcEEEEE
Confidence 66554443
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.5e-27 Score=205.93 Aligned_cols=219 Identities=14% Similarity=0.113 Sum_probs=171.5
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC-----CcEEEEec
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-----GGICIWAP 173 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~iwd~ 173 (350)
...|.+++|+|++++|++++.|+.|++||+.. ++....+. +...|.+++|+|++..+++++.+ +.|++||+
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN--GQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTT--CCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 34799999999999999999999999999954 55555553 78899999999999999888888 99999999
Q ss_pred CCCCCCceeecc--------------------cccccce--ecCCCCCceEEe---------eeccCCCCCceeeEEECC
Q 018806 174 SYPGNAASVRSG--------------------AASFLGA--LSRGPGTRWTLV---------DFLRSQNGEQITALSWGP 222 (350)
Q Consensus 174 ~~~~~~~~~~~~--------------------~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~sp 222 (350)
........+... .+.+... +..+.++.+.++ ..+..|. ..|.+++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~ 228 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE-KSISDMQFSP 228 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS-SCEEEEEECT
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC-CceeEEEECC
Confidence 855432222111 1111111 122233333333 3445564 6899999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCC--------------eEEEEeCCCCce
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG--------------TFYLWETNTWTS 288 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~--------------~v~iwd~~~~~~ 288 (350)
++++|++++.| |.|++||+++++......+...+..++|+|+++++++++.++ .+++||..+++.
T Consensus 229 ~~~~l~~~~~d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 229 DLTYFITSSRD-TNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp TSSEEEEEETT-SEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred CCCEEEEecCC-ceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 99999999999 699999999998887777889999999999999999999888 899999999887
Q ss_pred -eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEE
Q 018806 289 -EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSI 323 (350)
Q Consensus 289 -~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~ 323 (350)
..+..|...|.+++|+|+|++|++++ ++.+.+|.+
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred hhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 45668999999999999999999887 444444444
No 48
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=1.2e-27 Score=211.98 Aligned_cols=195 Identities=17% Similarity=0.285 Sum_probs=155.8
Q ss_pred cCeeEEEEecC-CCEEEEEECCCeEEEEEccCCCCCceeEe----cCCCCCCeeEEEEee-CCCeEEEEecCCcEEEEec
Q 018806 100 VDLQGVSWHQH-KHIVAFISGSTQVIVRDYEDSEGKDACIL----TSDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAP 173 (350)
Q Consensus 100 ~~V~~v~~sp~-g~~la~~s~d~~i~iw~~~~~~~~~~~~~----~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~iwd~ 173 (350)
..|.++.|+|+ +..|++|+.|++|++||+.. ++....+ ..+|...|.+++|++ ++..+++++.|++|++||+
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~ 235 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTT--GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDL 235 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTT--CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEET
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCC--CcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEEC
Confidence 35778888886 46799999999999999964 5544433 146889999999987 6677888888999999999
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG 253 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~ 253 (350)
+..... ...+.+|. ..|.+++|+|++++|++++.| |+|++||++++........
T Consensus 236 ~~~~~~------------------------~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D-~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 236 RITSRA------------------------VRTYHGHE-GDINSVKFFPDGQRFGTGSDD-GTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp TTTCCC------------------------CEEECCCS-SCCCEEEECTTSSEEEEECSS-SCEEEEETTTTEEEEEECC
T ss_pred CCCCcc------------------------eEEECCcC-CCeEEEEEecCCCeEEEEcCC-CeEEEEECCCCcEEEEecc
Confidence 743221 23456775 799999999999999999999 6999999999876554322
Q ss_pred --------CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-cc----ccCCCCeEEEEEcCCCCEEEEEE-CCCeE
Q 018806 254 --------FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PW----SSTSGFVTGATWDPEGRMILLAF-AGSLT 319 (350)
Q Consensus 254 --------~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~----~~~~~~v~~~~~s~~g~~l~~~~-~~~~~ 319 (350)
...+.+++|+|+|++|++|+.||.|++||+.+++.. .+ ..|...|++++|+|+|++|++++ ++.+.
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 124889999999999999999999999999988763 22 47899999999999999999887 44444
Q ss_pred EEE
Q 018806 320 LGS 322 (350)
Q Consensus 320 ~~~ 322 (350)
+|.
T Consensus 370 iW~ 372 (380)
T 3iz6_a 370 IWA 372 (380)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=5.5e-27 Score=209.17 Aligned_cols=220 Identities=17% Similarity=0.280 Sum_probs=169.9
Q ss_pred CccCeeEEEEec-CCCEEEEEECCCeEEEEEccCCCC-----CceeEecCCCCCCeeEEEEeeCC-CeEEEEecCCcEEE
Q 018806 98 PEVDLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSEG-----KDACILTSDSQRDVKVLEWRPNG-GRSLSVGCKGGICI 170 (350)
Q Consensus 98 ~~~~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~~~~-----~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~i 170 (350)
+...|++++|+| ++++|++++.||.|+||++..... .....+ .+|...|.+++|+|++ ..+++++.|+.|++
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 355799999999 999999999999999999965321 233344 4799999999999998 46777778999999
Q ss_pred EecCCCCCCceeecccccccceecCCCCCceEEeeec--cCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce
Q 018806 171 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFL--RSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT 248 (350)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~ 248 (350)
||+..... ...+ .+|. ..|.+++|+|++++|++++.| |.|++||+++++..
T Consensus 159 wd~~~~~~-------------------------~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 159 WDVGTGAA-------------------------VLTLGPDVHP-DTIYSVDWSRDGALICTSCRD-KRVRVIEPRKGTVV 211 (402)
T ss_dssp EETTTTEE-------------------------EEEECTTTCC-SCEEEEEECTTSSCEEEEETT-SEEEEEETTTTEEE
T ss_pred EECCCCCc-------------------------cEEEecCCCC-CceEEEEECCCCCEEEEEecC-CcEEEEeCCCCcee
Confidence 99984322 3334 4554 799999999999999999999 69999999998766
Q ss_pred eee--ecCCC-eEEEEEcCCCCEEEEE---ecCCeEEEEeCCCCce---eccccCCCCeEEEEEcCCCCEEEEEECCCeE
Q 018806 249 PIR--RGFGG-LSILKWSPTGDYFFAA---KFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAFAGSLT 319 (350)
Q Consensus 249 ~~~--~~~~~-v~~~~~sp~g~~l~~~---~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~ 319 (350)
... .|.+. +.+++|+|++++|+++ +.|+.|++||+++++. .....+...+.+++|+|++++|++++..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS 291 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC
T ss_pred eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe
Confidence 543 45554 8999999999999999 7899999999998765 2223567789999999999999877654555
Q ss_pred EEEEEeCCCCC---CCcee--ecccccceee
Q 018806 320 LGSIHFASKPP---SLDAH--LLPVDLPDIV 345 (350)
Q Consensus 320 ~~~~~~~~~~~---~~~~~--~~~v~~~~~~ 345 (350)
+..|++....+ .+..| ..++....+.
T Consensus 292 i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 292 IRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp EEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred EEEEEecCCCcceEeecccccCCcccceEEe
Confidence 66666654432 33333 3556555443
No 50
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=4.1e-27 Score=202.68 Aligned_cols=216 Identities=20% Similarity=0.303 Sum_probs=167.1
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|.+++|+|++++|++++.|+.|++||+.. ++....+ .+|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCceEEEEEcCCCCEEEEECCCCEEEEEECCC--CcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 34699999999999999999999999999954 5555554 47999999999999999999999999999999984332
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--ecCCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGG 256 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~--~~~~~ 256 (350)
...+..|. ..|.+++|+|++++|++++.| |.|++||+++++..... .+...
T Consensus 142 -------------------------~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~ 194 (312)
T 4ery_A 142 -------------------------LKTLPAHS-DPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDDNPP 194 (312)
T ss_dssp -------------------------EEEECCCS-SCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEECCSSCCC
T ss_pred -------------------------EEEecCCC-CcEEEEEEcCCCCEEEEEeCC-CcEEEEECCCCceeeEEeccCCCc
Confidence 33455665 689999999999999999999 69999999988765433 34567
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCe--EEEEE-cCCCCEEEEEECCCeEEEEEEeCCCCC--
Q 018806 257 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFV--TGATW-DPEGRMILLAFAGSLTLGSIHFASKPP-- 330 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v--~~~~~-s~~g~~l~~~~~~~~~~~~~~~~~~~~-- 330 (350)
+..++|+|++++|++++.|+.|++||+++++.. .+..|.... ....| .+++++|++++. +..+..|++.....
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT-TSCEEEEETTTCCEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC-CCEEEEEECCCchhhh
Confidence 999999999999999999999999999998874 344554432 22334 467888887662 23455566554432
Q ss_pred CCceeecccccceee
Q 018806 331 SLDAHLLPVDLPDIV 345 (350)
Q Consensus 331 ~~~~~~~~v~~~~~~ 345 (350)
.+.+|..+|....++
T Consensus 274 ~~~~h~~~v~~~~~~ 288 (312)
T 4ery_A 274 KLQGHTDVVISTACH 288 (312)
T ss_dssp EECCCSSCEEEEEEC
T ss_pred hhhccCCcEEEEeec
Confidence 566777776655444
No 51
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=7.4e-27 Score=210.88 Aligned_cols=235 Identities=11% Similarity=0.162 Sum_probs=163.6
Q ss_pred CCCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCC-------C--ceeEecCCCC------------CCeeEEEEee
Q 018806 96 LLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEG-------K--DACILTSDSQ------------RDVKVLEWRP 154 (350)
Q Consensus 96 ~~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~-------~--~~~~~~~~~~------------~~v~~~~~sp 154 (350)
+.....|++++|+|+|++||+|+.||.|+||++..... . ....+ .+|. ..|.+++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCceEEEEEcC
Confidence 34456899999999999999999999999999964221 0 12333 4787 8899999999
Q ss_pred CC--CeEEEEecCCcEEEEecCCCCCCceeec-----ccc---cccceecCCC--CCce----EEeee-ccCCCCCceee
Q 018806 155 NG--GRSLSVGCKGGICIWAPSYPGNAASVRS-----GAA---SFLGALSRGP--GTRW----TLVDF-LRSQNGEQITA 217 (350)
Q Consensus 155 ~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~---~~~~~~~~~~--~~~~----~~~~~-~~~~~~~~v~~ 217 (350)
++ ..+++++.|+.|++||+........... +.. .....+.... ...+ ..... ..+|. ..|.+
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~ 182 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT-YHINS 182 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS-SCCCE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC-cceEE
Confidence 97 6888898899999999974221100000 000 0000000000 0000 01112 35665 79999
Q ss_pred EEECCCCCeEEEEEeCCCeEEEEeCCCC-Ccee--------eeecCCCeEEEEEcCCC-CEEEEEecCCeEEEEeCCCCc
Q 018806 218 LSWGPDGRYLASASYESSSFTIWDVAQG-LGTP--------IRRGFGGLSILKWSPTG-DYFFAAKFDGTFYLWETNTWT 287 (350)
Q Consensus 218 ~~~sp~g~~l~~~~~d~g~i~iwd~~~~-~~~~--------~~~~~~~v~~~~~sp~g-~~l~~~~~d~~v~iwd~~~~~ 287 (350)
++|+|++++|+++ .| |.|++||++.. +... +..|...|.+++|+|++ ++|++++.|+.|++||+++++
T Consensus 183 ~~~~~~~~~l~s~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 183 ISINSDYETYLSA-DD-LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEECTTSSEEEEE-CS-SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEcCCCCEEEEe-CC-CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 9999999999998 67 79999999843 3332 33577889999999998 999999999999999999987
Q ss_pred e-----eccccCCC------------CeEEEEEcCCCCEEEEEECCCeEEEEEEeCC-C--CCCCceee
Q 018806 288 S-----EPWSSTSG------------FVTGATWDPEGRMILLAFAGSLTLGSIHFAS-K--PPSLDAHL 336 (350)
Q Consensus 288 ~-----~~~~~~~~------------~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 336 (350)
. ..+..|.. .|.+++|+|+|++|++++. ..+..|++.. . ...+.+|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCG
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccc
Confidence 5 34455554 8999999999999998877 4556666543 2 22555564
No 52
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.4e-27 Score=225.79 Aligned_cols=219 Identities=15% Similarity=0.239 Sum_probs=173.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
.|++++|+|++++|++|+.||.|+||++...++.....+ .+|.+.|++++|+|+ ++.+++++.||.|++||+..+
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~-- 87 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-- 87 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT--
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC--
Confidence 499999999999999999999999999974344444444 589999999999988 889999999999999998832
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC--CCeEEEEEeCCCeEEEEeCCCCCc---eeeeec
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD--GRYLASASYESSSFTIWDVAQGLG---TPIRRG 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~d~g~i~iwd~~~~~~---~~~~~~ 253 (350)
.+.....+.+|. ..|.+++|+|+ ++.+++++.| |.|++||++++.. .....|
T Consensus 88 ---------------------~~~~~~~~~~h~-~~V~~v~~sp~~~~~~l~sgs~d-g~I~vwdl~~~~~~~~~~~~~~ 144 (753)
T 3jro_A 88 ---------------------RWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASSD-GKVSVVEFKENGTTSPIIIDAH 144 (753)
T ss_dssp ---------------------EEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETT-SEEEEEECCSSSCCCCEEEECC
T ss_pred ---------------------cccccccccCCC-CCeEEEEECCCCCCCEEEEEeCC-CcEEEEEeecCCCcceeEeecC
Confidence 122344466665 79999999999 9999999999 7999999998732 345567
Q ss_pred CCCeEEEEEcC-------------CCCEEEEEecCCeEEEEeCCCCce-----eccccCCCCeEEEEEcCC---CCEEEE
Q 018806 254 FGGLSILKWSP-------------TGDYFFAAKFDGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPE---GRMILL 312 (350)
Q Consensus 254 ~~~v~~~~~sp-------------~g~~l~~~~~d~~v~iwd~~~~~~-----~~~~~~~~~v~~~~~s~~---g~~l~~ 312 (350)
...+.+++|+| ++++|++++.||.|++||++++.. ..+..|...|++++|+|+ +++|++
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 88999999999 589999999999999999988743 345688999999999999 899988
Q ss_pred EE-CCCeEEEEEEeCCCC-----CCCceeecccccceee
Q 018806 313 AF-AGSLTLGSIHFASKP-----PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 313 ~~-~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~ 345 (350)
++ ++.+.+|.++..... .....|..+|....+.
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~s 263 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWS 263 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEEC
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEc
Confidence 87 555555555443211 1333566666655554
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.3e-26 Score=220.89 Aligned_cols=200 Identities=15% Similarity=0.227 Sum_probs=162.9
Q ss_pred CCccCeeEEEEecCC-CEEEEEECCCeEEEEEccCCCCC--ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEec
Q 018806 97 LPEVDLQGVSWHQHK-HIVAFISGSTQVIVRDYEDSEGK--DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAP 173 (350)
Q Consensus 97 ~~~~~V~~v~~sp~g-~~la~~s~d~~i~iw~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~ 173 (350)
.|...|++++|+|++ ++|++|+.|++|++|++...... .......+|...|.+++|+|+++.+++++.|++|+|||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 356689999999875 79999999999999999643221 112233589999999999999999999999999999999
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-- 251 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-- 251 (350)
.... ....+.+|. ..|.+++|+|++++|++++.| |+|++||........+.
T Consensus 460 ~~~~-------------------------~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D-~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 460 AAGV-------------------------STRRFVGHT-KDVLSVAFSLDNRQIVSASRD-RTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp TTTE-------------------------EEEEEECCS-SCEEEEEECTTSSCEEEEETT-SCEEEECTTSCEEEEECSS
T ss_pred CCCc-------------------------ceeEEeCCC-CCEEEEEEeCCCCEEEEEeCC-CEEEEEECCCCcceeeccC
Confidence 7432 234567776 799999999999999999999 69999998765433332
Q ss_pred --ecCCCeEEEEEcCCC--CEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEE
Q 018806 252 --RGFGGLSILKWSPTG--DYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSI 323 (350)
Q Consensus 252 --~~~~~v~~~~~sp~g--~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~ 323 (350)
.|...|.+++|+|++ ..|++++.|++|++||+++++. ..+..|...|++++|+|+|++|++++ ++.+.+|++
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 466789999999987 5799999999999999999887 45678999999999999999999887 444555443
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-26 Score=206.75 Aligned_cols=228 Identities=15% Similarity=0.272 Sum_probs=168.8
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCC-CCceeEecCCCCCCeeEEEEeeC-CCeEEEEecCCcEEEEecCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSE-GKDACILTSDSQRDVKVLEWRPN-GGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~v~iwd~~~ 175 (350)
+...|++++|+|++++|++++.|+.|++|++.... +........+|...|.+++|+|+ +..+++++.|+.|++||+..
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNK 145 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTT
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCC
Confidence 35679999999999999999999999999996421 12233344579999999999998 77788888899999999986
Q ss_pred CC------CCcee--ecccccccceecCC-----------CCCceEEee--------eccCCC-----CCceeeEEECCC
Q 018806 176 PG------NAASV--RSGAASFLGALSRG-----------PGTRWTLVD--------FLRSQN-----GEQITALSWGPD 223 (350)
Q Consensus 176 ~~------~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~~--------~~~~~~-----~~~v~~~~~sp~ 223 (350)
.. ....+ .......+..+.+. .++.+.+++ .+..+. ...+.+++|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 54 22221 11122223333333 334444443 233331 368999999999
Q ss_pred C-CeEEEEEeCCC---eEEEEeCCCC-Ccee-ee-ecCCCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCCce-eccccC
Q 018806 224 G-RYLASASYESS---SFTIWDVAQG-LGTP-IR-RGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTS-EPWSST 294 (350)
Q Consensus 224 g-~~l~~~~~d~g---~i~iwd~~~~-~~~~-~~-~~~~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~ 294 (350)
+ .++++++.+ | .|++||++++ .... +. .|...+.+++|+| ++++|++++.|+.|++||+++++. ..+..|
T Consensus 226 ~~~~l~~~~~d-~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 226 NSTRVATATGS-DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp CTTEEEEEECC-SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCEEEEEECC-CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 7 577888777 7 9999999986 3333 44 5889999999999 999999999999999999999887 456688
Q ss_pred CCCeEEEEEcCCC-CEEEEEECCCeEEEEEEeCC
Q 018806 295 SGFVTGATWDPEG-RMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 295 ~~~v~~~~~s~~g-~~l~~~~~~~~~~~~~~~~~ 327 (350)
...|.+++|+|++ ++|++++ .+..+..|++..
T Consensus 305 ~~~v~~~~~s~~~~~~l~s~~-~d~~i~iw~~~~ 337 (416)
T 2pm9_A 305 GNWCFKTKFAPEAPDLFACAS-FDNKIEVQTLQN 337 (416)
T ss_dssp SSCCCCEEECTTCTTEEEECC-SSSEEEEEESCC
T ss_pred CCceEEEEECCCCCCEEEEEe-cCCcEEEEEccC
Confidence 9999999999999 6777665 334555565544
No 55
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=9e-27 Score=204.48 Aligned_cols=188 Identities=13% Similarity=0.288 Sum_probs=143.9
Q ss_pred cCeeEEEEecC---CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC
Q 018806 100 VDLQGVSWHQH---KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~---g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
..|++++|+|+ |++|++++.||.|+||++... +........+|...|.+++|+|+++.+++++.|+.|++||+...
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 45999999999 699999999999999999642 33332344579999999999999989999999999999999843
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEE--CCCCCeEEEEEeCCCeEEEEeCCCCCce------
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW--GPDGRYLASASYESSSFTIWDVAQGLGT------ 248 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~g~~l~~~~~d~g~i~iwd~~~~~~~------ 248 (350)
.... +..|. ..|.+++| +|++++|++++.| |.|++||+++++..
T Consensus 119 ~~~~--------------------------~~~~~-~~v~~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 119 QAIQ--------------------------IAQHD-APVKTIHWIKAPNYSCVMTGSWD-KTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp EEEE--------------------------EEECS-SCEEEEEEEECSSCEEEEEEETT-SEEEEECSSCSSCSEEEECS
T ss_pred Ccee--------------------------ecccc-CceEEEEEEeCCCCCEEEEccCC-CcEEEEECCCCcEEEEEecC
Confidence 3211 22232 46666666 6666666666666 46666666544211
Q ss_pred --------------------------------------------------------------------------------
Q 018806 249 -------------------------------------------------------------------------------- 248 (350)
Q Consensus 249 -------------------------------------------------------------------------------- 248 (350)
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 171 ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence
Q ss_pred -----eeeecCC------------CeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEE
Q 018806 249 -----PIRRGFG------------GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMI 310 (350)
Q Consensus 249 -----~~~~~~~------------~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l 310 (350)
.+..|.. .|.+++|+|++++|++++.||.|++||+++++. ..+..|...|.+++|+|+|++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 330 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 330 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCE
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeE
Confidence 1111222 599999999999999999999999999999887 4566889999999999999999
Q ss_pred EEEECC
Q 018806 311 LLAFAG 316 (350)
Q Consensus 311 ~~~~~~ 316 (350)
+++++.
T Consensus 331 ~~~s~d 336 (368)
T 3mmy_A 331 AYASSY 336 (368)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 999744
No 56
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=2e-27 Score=211.40 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=140.4
Q ss_pred ccCeeEEEEec--------CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCC-eEEEEecCCcEE
Q 018806 99 EVDLQGVSWHQ--------HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGG-RSLSVGCKGGIC 169 (350)
Q Consensus 99 ~~~V~~v~~sp--------~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~ 169 (350)
...|++++|+| |+++||+++.|++|+|||+.. +...... ..|...|.+++|+|++. .+++++.|++|+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~--~~~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD--EGPILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET--TEEEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC--Cceeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 34599999998 899999999999999999963 4443444 36888999999999875 566677789999
Q ss_pred EEecCCCCCCceeeccccccc-ceecCCCCCceEEeeeccCCCCCceeeEEEC-CCCCeEEEEEeCCCeEEEEeCCCCCc
Q 018806 170 IWAPSYPGNAASVRSGAASFL-GALSRGPGTRWTLVDFLRSQNGEQITALSWG-PDGRYLASASYESSSFTIWDVAQGLG 247 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~g~~l~~~~~d~g~i~iwd~~~~~~ 247 (350)
+||+..+.............. ..+..... .........+|. ..+.++.|+ |+++.|++++.| +++++||+..++.
T Consensus 213 ~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~~~~-~~v~~v~~~~~dg~~l~s~s~d-~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 213 IFDWTLNLSAEENSQTELVKNPWLLTLNTL-PLVNTCHSSGIA-SSLANVRWIGSDGSGILAMCKS-GAWLRWNLFANND 289 (393)
T ss_dssp EEETTCCC----------CSCCCSEEEESG-GGC------CCS-SSCSEEEEETTTTCEEEEECTT-SEEEEEEC-----
T ss_pred EEECCCCcccccccccCCcccceEEecccc-cceeeeeccccc-ccceeeeeecCCCCEEEEEeCC-CCEEEEECccCCC
Confidence 999986544332221100000 00000000 000111234554 688999986 799999999999 6999999987643
Q ss_pred ee-eeecCC------------------CeEEEEEcC--CCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcC
Q 018806 248 TP-IRRGFG------------------GLSILKWSP--TGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDP 305 (350)
Q Consensus 248 ~~-~~~~~~------------------~v~~~~~sp--~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~ 305 (350)
.. +..+.. ......|+| ++.++++|+.||.|++||+.+++. .....|..+|.+++|+|
T Consensus 290 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp 369 (393)
T 4gq1_A 290 YNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ 369 (393)
T ss_dssp --------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT
T ss_pred CceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC
Confidence 22 111221 122233444 344667888999999999999877 44567888999999999
Q ss_pred CCCEEEEEECCCeEEE
Q 018806 306 EGRMILLAFAGSLTLG 321 (350)
Q Consensus 306 ~g~~l~~~~~~~~~~~ 321 (350)
||++||+++++...++
T Consensus 370 dG~~LA~as~~Gv~lv 385 (393)
T 4gq1_A 370 DGSHLAIATEGSVLLT 385 (393)
T ss_dssp TSSEEEEEESSEEEEE
T ss_pred CCCEEEEEeCCCeEEE
Confidence 9999999987654433
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=9.5e-26 Score=194.19 Aligned_cols=220 Identities=19% Similarity=0.300 Sum_probs=155.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec-CCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
.+++|+||+++ +||+| .|++|+|||+.+ ++....+. .+|...|++++|+|+++.+++++.|++|++||+..++..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~t--g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCC--CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 46789999886 77765 599999999964 55544442 368889999999999999999999999999999865443
Q ss_pred ceeecccccccce--------ecCCCCCceE---------EeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 180 ASVRSGAASFLGA--------LSRGPGTRWT---------LVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 180 ~~~~~~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
..+... ...... .+.+.++... ....+.+|. ..+..+.+++++++|++++.| |+|++||+
T Consensus 103 ~~~~~h-~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~s~~~d-~~i~iwd~ 179 (318)
T 4ggc_A 103 RNMTSH-SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS-QEVCGLRWAPDGRHLASGGND-NLVNVWPS 179 (318)
T ss_dssp EEEECC-SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-SCEEEEEECTTSSEEEEEETT-SCEEEEES
T ss_pred EEecCc-cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc-CceEEEEEcCCCCEEEEEecC-cceeEEEC
Confidence 333221 111111 1111222211 233455665 678888888888888888888 68888888
Q ss_pred CCCCc-------------------------------------------------eeeeecCCCeEEEEEcCCCCEEEEEe
Q 018806 243 AQGLG-------------------------------------------------TPIRRGFGGLSILKWSPTGDYFFAAK 273 (350)
Q Consensus 243 ~~~~~-------------------------------------------------~~~~~~~~~v~~~~~sp~g~~l~~~~ 273 (350)
++++. .....+...+..+.|+|+++.+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEE
Confidence 75421 11112334567788888888877654
Q ss_pred --cCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 274 --FDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 274 --~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
.|+.|++||+++++. ..+.+|.+.|++++|+|+|++|++++.+ ..+..|++.+.
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D-~~v~iWd~~~~ 316 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD-ETLRLWRCFEL 316 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT-TEEEEECCSCC
T ss_pred EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC-CeEEEEECCCC
Confidence 789999999999887 4577899999999999999999988733 35556665543
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=207.94 Aligned_cols=219 Identities=13% Similarity=0.198 Sum_probs=169.8
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|++++|++++.|+.|++|+.. +.....+ ..|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWNKT---GALLNVL-NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCeeeec-cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 4579999999999999999999999999942 5555555 57999999999999999999999999999999985443
Q ss_pred Cceeeccc----------------------ccccce-ecCCCCCceEEee--------eccCCCCCceeeEEECCCCCeE
Q 018806 179 AASVRSGA----------------------ASFLGA-LSRGPGTRWTLVD--------FLRSQNGEQITALSWGPDGRYL 227 (350)
Q Consensus 179 ~~~~~~~~----------------------~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l 227 (350)
...+.... +.+... +..+.++.+.+++ .+..|. ..|.+++|+|++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCS-SCEEEEEEETTTTEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC-CceEEEEECCCCCEE
Confidence 33222111 111111 1122233333333 344564 689999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCCceee-eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCeEEEEEcC
Q 018806 228 ASASYESSSFTIWDVAQGLGTPI-RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDP 305 (350)
Q Consensus 228 ~~~~~d~g~i~iwd~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v~~~~~s~ 305 (350)
++++.+ |.|++||+++++.... ..|...+.+++|+|++ ++++++.|+.|++||+++++.. .+..|...+.+++|+|
T Consensus 263 ~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 263 LSASDD-GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EEEETT-SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EEEcCC-CEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 999999 6999999998876554 4578899999999999 9999999999999999998874 4557888999999999
Q ss_pred CCCEEEEEE-CCCeEEEEEE
Q 018806 306 EGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 306 ~g~~l~~~~-~~~~~~~~~~ 324 (350)
++++|++++ ++.+.+|.++
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp TSSEEEEEETTSCEEEEECH
T ss_pred CCCEEEEEECCCeEEEEECC
Confidence 999999988 4445555554
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-27 Score=215.88 Aligned_cols=189 Identities=11% Similarity=0.106 Sum_probs=152.5
Q ss_pred ccCeeEEEEecC------CCEEEEEECCCeEEEEEccCCCCC--------ceeEecCCCCCCeeEEEEeeCCCeEEEEec
Q 018806 99 EVDLQGVSWHQH------KHIVAFISGSTQVIVRDYEDSEGK--------DACILTSDSQRDVKVLEWRPNGGRSLSVGC 164 (350)
Q Consensus 99 ~~~V~~v~~sp~------g~~la~~s~d~~i~iw~~~~~~~~--------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 164 (350)
...|.+++|+|+ +.+||+++.||+|+|||+...... .......+|...|++++|+++ ..|++++.
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~ 285 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFK 285 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEET
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeC
Confidence 356999999997 579999999999999999643211 011123478899999999987 68888888
Q ss_pred CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeE--EECCCC-CeEEEEEeCCCeEEEEe
Q 018806 165 KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL--SWGPDG-RYLASASYESSSFTIWD 241 (350)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~sp~g-~~l~~~~~d~g~i~iwd 241 (350)
||+|++||+.....+ ...+.+|. ..|.++ +|+|+| ++|++++.| |+|++||
T Consensus 286 DgtV~lWD~~~~~~~------------------------~~~~~~H~-~~V~sv~~~~s~~g~~~laS~S~D-~tvklWD 339 (524)
T 2j04_B 286 NGFVAEFDLTDPEVP------------------------SFYDQVHD-SYILSVSTAYSDFEDTVVSTVAVD-GYFYIFN 339 (524)
T ss_dssp TSEEEEEETTBCSSC------------------------SEEEECSS-SCEEEEEEECCTTSCCEEEEEETT-SEEEEEC
T ss_pred CCEEEEEECCCCCCc------------------------eEEeeccc-ccEEEEEEEcCCCCCeEEEEeccC-CeEEEEE
Confidence 999999999843221 12245665 799999 678888 889999999 6999999
Q ss_pred CCCCCcee-eeecC--CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 242 VAQGLGTP-IRRGF--GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 242 ~~~~~~~~-~~~~~--~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
+++++... +..|. ..+.+++|+|+++.+++++.|++|++||++++.. ..+.+|...|++++|+|+|++|++|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 340 PKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp GGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEE
T ss_pred CCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEE
Confidence 99876543 33443 3588999999999999999999999999999886 55778999999999999999999887
No 60
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-26 Score=208.46 Aligned_cols=215 Identities=12% Similarity=0.076 Sum_probs=164.6
Q ss_pred hhhhhhhhccccccCCCCcC------------C---CCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec
Q 018806 76 TLHGIISHSIKPLLHPDHVH------------L---LPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT 140 (350)
Q Consensus 76 ~~~gh~~~~~~~~~~p~~~~------------~---~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~ 140 (350)
.+.||...++...+.|.... + .+...|.+++|||+|++||+++.||.++||+.. + ....+
T Consensus 47 ~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~---~-~l~~l- 121 (588)
T 2j04_A 47 DINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN---K-MLTNL- 121 (588)
T ss_dssp CCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT---E-EEEEC-
T ss_pred eecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC---c-eeeec-
Confidence 34799999998887775311 1 113469999999999999999999999999953 2 33333
Q ss_pred CCCCC-----CeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeec----cCCC
Q 018806 141 SDSQR-----DVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFL----RSQN 211 (350)
Q Consensus 141 ~~~~~-----~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 211 (350)
. |.. .|.+++|||||+.+++++.||+|+|||+..+..... ++....++ .+|.
T Consensus 122 ~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~------------------~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 122 D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP------------------EFYFESSIRLSDAGSK 182 (588)
T ss_dssp C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC------------------CCEEEEEEECSCTTCC
T ss_pred c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc------------------cceeeeeeeccccccc
Confidence 3 444 599999999999999999999999999984321000 01122333 5554
Q ss_pred CCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce----eee-ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q 018806 212 GEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT----PIR-RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW 286 (350)
Q Consensus 212 ~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~----~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~ 286 (350)
..|.+++|+|+| +++++.| ++|++||+.++... .+. .|...|.+++|+ |+.||+++ +++|++||+.++
T Consensus 183 -~~V~sVawSPdg--Laass~D-~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 183 -DWVTHIVWYEDV--LVAALSN-NSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp -CCEEEEEEETTE--EEEEETT-CCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT
T ss_pred -ccEEEEEEcCCc--EEEEeCC-CeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC
Confidence 799999999999 8888888 59999999987743 232 466889999999 68898887 699999999998
Q ss_pred ceeccc-cCCCCeEEEEE--cCCCCEEEEEE-CCCeEEEE
Q 018806 287 TSEPWS-STSGFVTGATW--DPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 287 ~~~~~~-~~~~~v~~~~~--s~~g~~l~~~~-~~~~~~~~ 322 (350)
+...+. +|...+.+++| +||++.|+++. ++. .+|.
T Consensus 256 ~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 256 SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 884444 89999999999 99999998876 333 4444
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=8.1e-27 Score=208.99 Aligned_cols=195 Identities=15% Similarity=0.162 Sum_probs=155.4
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
+....|+|++++||+++.|+.|++||+.. +.. .....+|...|.+++|+|+++.+++++.|+.|++||+......
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-- 174 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNF--NLQ-REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP-- 174 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTS--CEE-EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC--
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCC--cce-eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc--
Confidence 44457899999999999999999999853 443 3344589999999999999988999999999999999854432
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee----cCC--
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR----GFG-- 255 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~----~~~-- 255 (350)
..+.+|. ..|.+++|+|++++|++++.| |+|++||+++++...... +..
T Consensus 175 -----------------------~~~~~h~-~~v~~~~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 175 -----------------------RTLIGHR-ATVTDIAIIDRGRNVLSASLD-GTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp -----------------------EEEECCS-SCEEEEEEETTTTEEEEEETT-SCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred -----------------------eEEcCCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEeECCCCceeEEeecCCCCCCCc
Confidence 2355665 799999999999999999999 699999999887655432 223
Q ss_pred -------------------CeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-c-ccCCCCeEEEEEcCCCC-EEEEE
Q 018806 256 -------------------GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-W-SSTSGFVTGATWDPEGR-MILLA 313 (350)
Q Consensus 256 -------------------~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~-~~~~~~v~~~~~s~~g~-~l~~~ 313 (350)
.+.+++|+|+|++|++++.||.|++||+++++... + ..|...|.+++|+|+++ +|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEE
Confidence 34445568899999999999999999999988633 2 35788999999999999 88877
Q ss_pred ECCCeEEEEEEeCC
Q 018806 314 FAGSLTLGSIHFAS 327 (350)
Q Consensus 314 ~~~~~~~~~~~~~~ 327 (350)
+.+ ..+..|++..
T Consensus 310 ~~d-g~i~vwd~~~ 322 (420)
T 3vl1_A 310 YEN-GMLAQWDLRS 322 (420)
T ss_dssp ETT-SEEEEEETTC
T ss_pred eCC-CeEEEEEcCC
Confidence 633 3566666654
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.1e-25 Score=200.49 Aligned_cols=228 Identities=16% Similarity=0.227 Sum_probs=165.1
Q ss_pred CccCeeEEEEec-CCCEEEEEECCCeEEEEEccCCCCCceeEec----------CCCCCCeeEEEEee-CCCeEEEEecC
Q 018806 98 PEVDLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSEGKDACILT----------SDSQRDVKVLEWRP-NGGRSLSVGCK 165 (350)
Q Consensus 98 ~~~~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~----------~~~~~~v~~~~~sp-~~~~l~~~~~d 165 (350)
+...|++++|+| ++++||+++.||.|++|++............ .+|...|.+++|+| ++..+++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 456799999999 9999999999999999999753332222110 24889999999999 65677788889
Q ss_pred CcEEEEecCCCCCCceeeccc------cccc-----ceecCCCCCceEEee--------eccCCCCCceeeEEECCCCCe
Q 018806 166 GGICIWAPSYPGNAASVRSGA------ASFL-----GALSRGPGTRWTLVD--------FLRSQNGEQITALSWGPDGRY 226 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~ 226 (350)
+.|++||+........+.... ..+. .-+..+.++.+.+++ .+.+|. ..|.+++|+|++++
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~ 200 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR-QEILAVSWSPRYDY 200 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC-SCEEEEEECSSCTT
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC-CcEEEEEECCCCCc
Confidence 999999998554333332111 1110 112222334444443 445565 78999999999995
Q ss_pred -EEEEEeCCCeEEEEeCCCCCce-e-e---------------eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 227 -LASASYESSSFTIWDVAQGLGT-P-I---------------RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 227 -l~~~~~d~g~i~iwd~~~~~~~-~-~---------------~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
|++++.| |.|++||++.+... . + ..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 201 ll~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 201 ILATASAD-SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEEEETT-SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred EEEEEcCC-CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 7788888 79999999876421 1 1 35678899999999999999999999999999987653
Q ss_pred e------------------------------------------------ccccCCCCeEEEEEcCCCCEEEEEE-CCCeE
Q 018806 289 E------------------------------------------------PWSSTSGFVTGATWDPEGRMILLAF-AGSLT 319 (350)
Q Consensus 289 ~------------------------------------------------~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~ 319 (350)
. .+..|...|++++|+|++++|++++ ++.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 280 TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNIL 359 (408)
T ss_dssp CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEE
Confidence 1 1235788999999999999999887 55555
Q ss_pred EEEEEeCC
Q 018806 320 LGSIHFAS 327 (350)
Q Consensus 320 ~~~~~~~~ 327 (350)
+|.+....
T Consensus 360 iw~~~~~~ 367 (408)
T 4a11_B 360 AWVPSLYE 367 (408)
T ss_dssp EEEECC--
T ss_pred EEeCCCCC
Confidence 55554443
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-26 Score=200.78 Aligned_cols=201 Identities=18% Similarity=0.316 Sum_probs=161.9
Q ss_pred ccCeeEEEEecC--CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecC
Q 018806 99 EVDLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 99 ~~~V~~v~~sp~--g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~ 174 (350)
...|++++|+++ +++|++++.|+.|++||+........... ..|...|.+++|+|+ +..+++++.|+.|++||+.
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 133 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 133 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecC
Confidence 346999999987 99999999999999999964221133333 478999999999999 8899999999999999998
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-------------CCCeEEEEEeCCCeEEEEe
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-------------DGRYLASASYESSSFTIWD 241 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-------------~g~~l~~~~~d~g~i~iwd 241 (350)
....... ..+..|. ..|.+++|+| +++.|++++.| |.|++||
T Consensus 134 ~~~~~~~-----------------------~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~i~d 188 (379)
T 3jrp_A 134 ENGTTSP-----------------------IIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-NLVKIWK 188 (379)
T ss_dssp TTSCCCE-----------------------EEEECCT-TCEEEEEECCCC----------CTTCEEEEEETT-SCEEEEE
T ss_pred CCCceee-----------------------EEecCCC-CceEEEEEcCccccccccccCCCCCCEEEEEeCC-CeEEEEE
Confidence 5432211 1234554 6899999999 69999999999 6999999
Q ss_pred CCCCCce-----eeeecCCCeEEEEEcCC---CCEEEEEecCCeEEEEeCCCCce------eccccCCCCeEEEEEcCCC
Q 018806 242 VAQGLGT-----PIRRGFGGLSILKWSPT---GDYFFAAKFDGTFYLWETNTWTS------EPWSSTSGFVTGATWDPEG 307 (350)
Q Consensus 242 ~~~~~~~-----~~~~~~~~v~~~~~sp~---g~~l~~~~~d~~v~iwd~~~~~~------~~~~~~~~~v~~~~~s~~g 307 (350)
++++... .+..|...|.+++|+|+ +++|++++.||.|++||+++++. .....+...|++++|+|+|
T Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 268 (379)
T 3jrp_A 189 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG 268 (379)
T ss_dssp EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS
T ss_pred ecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC
Confidence 9876532 23457889999999999 89999999999999999998742 2233478899999999999
Q ss_pred CEEEEEE-CCCeEEEEEEe
Q 018806 308 RMILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~~~~ 325 (350)
++|++++ ++.+.+|.+..
T Consensus 269 ~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 269 NVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCEEEEESSSSEEEEEEEE
T ss_pred CEEEEecCCCcEEEEeCCC
Confidence 9999887 66677777763
No 64
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=7.1e-26 Score=203.17 Aligned_cols=223 Identities=17% Similarity=0.227 Sum_probs=168.0
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++|+|+|+|++||+|+.||.|+|||+.. ++.+... .+|...+.+++|+ +..+++++.|+.+++||......
T Consensus 147 ~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~--~~~~~~~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 147 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNM-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEcCC--CcEEEEE-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce
Confidence 34699999999999999999999999999954 5555555 5899999988875 45777888899999999885444
Q ss_pred Cceeecccccccce----------ecCCCCCceEEee------------eccCCCCCceeeEEECCCCCeE-EEE--EeC
Q 018806 179 AASVRSGAASFLGA----------LSRGPGTRWTLVD------------FLRSQNGEQITALSWGPDGRYL-ASA--SYE 233 (350)
Q Consensus 179 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~------------~~~~~~~~~v~~~~~sp~g~~l-~~~--~~d 233 (350)
......+....... ++.+.++.+.++. ....|. ..|.+++|+|++..+ +++ +.|
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~-~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS-SCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccC-CceeeeeeCCCcccEEEEEeecCC
Confidence 33322222222222 2223344444443 233443 689999999976654 443 356
Q ss_pred CCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEe--cCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEE
Q 018806 234 SSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAK--FDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMI 310 (350)
Q Consensus 234 ~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~--~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l 310 (350)
|+|++||+.+++......+...+.++.|+|+++.+++++ .|+.|+|||+.+++. ..+.+|...|++++|+|||++|
T Consensus 301 -~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 301 -RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp -CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred -CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 799999999998888777888999999999999988765 689999999999887 4677899999999999999999
Q ss_pred EEEECCCeEEEEEEeCCCC
Q 018806 311 LLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~ 329 (350)
++++.+ ..+..|+++...
T Consensus 380 ~S~s~D-~tvriWdv~~~~ 397 (420)
T 4gga_A 380 ASAAAD-ETLRLWRCFELD 397 (420)
T ss_dssp EEEETT-TEEEEECCSCSS
T ss_pred EEEecC-CeEEEEECCCCC
Confidence 988743 356666666543
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=4.7e-26 Score=199.26 Aligned_cols=223 Identities=13% Similarity=0.179 Sum_probs=164.0
Q ss_pred cCeeEEEEecCCCEEE-EEEC---CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC---CCeEEEEecCCcEEEEe
Q 018806 100 VDLQGVSWHQHKHIVA-FISG---STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN---GGRSLSVGCKGGICIWA 172 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la-~~s~---d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~d~~v~iwd 172 (350)
..|.+++|+|++..++ +++. |+.|+||++.. ++.......+|...|.+++|+|+ +..+++++.|+.|++||
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH--GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS--SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC--CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 3599999999996555 5554 89999999964 44433433468899999999998 58888888899999999
Q ss_pred cCCCCCCceeeccccccccee----------------cCCCCCceEEeee---------cc---CCCCCceeeEE----E
Q 018806 173 PSYPGNAASVRSGAASFLGAL----------------SRGPGTRWTLVDF---------LR---SQNGEQITALS----W 220 (350)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~---------~~---~~~~~~v~~~~----~ 220 (350)
+................+..+ ..+.++.+.+++. +. ++....+.+++ |
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 986652222222222222222 2223344444432 22 22223788888 7
Q ss_pred CCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcC---CCCEEEEEecCCeEEEEeCCCCcee-cc-----
Q 018806 221 GPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSP---TGDYFFAAKFDGTFYLWETNTWTSE-PW----- 291 (350)
Q Consensus 221 sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp---~g~~l~~~~~d~~v~iwd~~~~~~~-~~----- 291 (350)
+|++++|++++.+ |.|++||+++++......+...+.+++|+| ++++|++++.|+.|++||+++++.. .+
T Consensus 177 ~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 255 (357)
T 3i2n_A 177 NQEERVVCAGYDN-GDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSE 255 (357)
T ss_dssp C-CCCEEEEEETT-SEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEE
T ss_pred CCCCCEEEEEccC-CeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeecc
Confidence 8999999999999 699999999998877778889999999999 9999999999999999999887653 22
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEEEe
Q 018806 292 SSTSGFVTGATWDPEGR-MILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 292 ~~~~~~v~~~~~s~~g~-~l~~~~-~~~~~~~~~~~ 325 (350)
..|...|++++|+|+++ +|++++ ++.+.+|.++.
T Consensus 256 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 256 KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 27899999999999999 677666 44455555554
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.5e-25 Score=199.88 Aligned_cols=222 Identities=17% Similarity=0.229 Sum_probs=169.4
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|++++|++++.||.|++||+.. ++....+ .+|...|.+++|+ +..+++++.|+.|++||+.....
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVES--QTKLRTM-AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcC--CeEEEEe-cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcc
Confidence 45799999999999999999999999999954 5555555 4899999999994 46888888899999999985443
Q ss_pred CceeecccccccceecCC----------CCCceEEee--------eccCCCCCceeeEEECCCCCeEEEEE---eCCCeE
Q 018806 179 AASVRSGAASFLGALSRG----------PGTRWTLVD--------FLRSQNGEQITALSWGPDGRYLASAS---YESSSF 237 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~---~d~g~i 237 (350)
...........+..+.+. .++.+.+++ .+..|. ..|.+++|+|++..+++.+ .| |.|
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~p~~~~ll~~~~gs~d-~~i 286 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN-AAVKAVAWCPWQSNLLATGGGTMD-KQI 286 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS-SCCCEEEECTTSTTEEEEECCTTT-CEE
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc-ceEEEEEECCCCCCEEEEecCCCC-CEE
Confidence 333333333333333333 334444443 345564 7899999999876665543 47 799
Q ss_pred EEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEe--cCCeEEEEeCCCCcee---ccccCCCCeEEEEEcCCCCEEEE
Q 018806 238 TIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAK--FDGTFYLWETNTWTSE---PWSSTSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 238 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~--~d~~v~iwd~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~ 312 (350)
++||+.+++......+...+.+++|+|++++|++++ .|+.|++||+.+++.. .+..|...|.+++|+|+|++|++
T Consensus 287 ~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 287 HFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 999999998887777888999999999999999854 8999999999987653 35688999999999999999998
Q ss_pred EECCCeEEEEEEeCCC
Q 018806 313 AFAGSLTLGSIHFASK 328 (350)
Q Consensus 313 ~~~~~~~~~~~~~~~~ 328 (350)
++.+ ..+..|++...
T Consensus 367 ~~~d-g~i~iw~~~~~ 381 (401)
T 4aez_A 367 AASD-ENLKFWRVYDG 381 (401)
T ss_dssp ECTT-SEEEEEECCC-
T ss_pred EeCC-CcEEEEECCCC
Confidence 8633 35566666543
No 67
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.4e-27 Score=209.76 Aligned_cols=208 Identities=11% Similarity=0.149 Sum_probs=155.7
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEE-----------------E----------EEccCCCCCceeEecCCCCCCeeEEEE
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVI-----------------V----------RDYEDSEGKDACILTSDSQRDVKVLEW 152 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~-----------------i----------w~~~~~~~~~~~~~~~~~~~~v~~~~~ 152 (350)
..|.+++|||||+++|+++.|++|+ + |++.. ++....+...|...|.+++|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~--~~~~~~~~~~~~~~V~~vaw 93 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFEL--AQQNGLLNSQPVCYPRVCKP 93 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSC--CCSSCSSTTSCSCCEEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEe--CCCceEeecCCCCcEEEEEE
Confidence 4699999999999999999999994 1 11211 11111222256788999999
Q ss_pred eeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCC----CCceeeEEECCCCCeEE
Q 018806 153 RPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN----GEQITALSWGPDGRYLA 228 (350)
Q Consensus 153 sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~g~~l~ 228 (350)
||+|..+++++.||.|++||... +...+. |+ ...+.+++|||||++|+
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~---------------------------~l~~l~-~~~~~~~~sv~svafSPDG~~LA 145 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK---------------------------MLTNLD-SKGNLSSRTYHCFEWNPIESSIV 145 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE---------------------------EEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc---------------------------eeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence 99999999999999999999541 123344 43 12599999999999999
Q ss_pred EEEeCCCeEEEEeCCCCCc--------eee----eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee----cc-
Q 018806 229 SASYESSSFTIWDVAQGLG--------TPI----RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE----PW- 291 (350)
Q Consensus 229 ~~~~d~g~i~iwd~~~~~~--------~~~----~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~----~~- 291 (350)
+++.| |+|++||+.++.. ..+ .+|...|.+++|+|+| +++++.|++|++||+.+++.. .+
T Consensus 146 sgs~D-GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 146 VGNED-GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp EEETT-SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred EEcCC-CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence 99999 7999999998853 223 3455799999999999 888889999999999988753 24
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCCC-CCc-eeeccccccee
Q 018806 292 SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP-SLD-AHLLPVDLPDI 344 (350)
Q Consensus 292 ~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~v~~~~~ 344 (350)
..|...|.+++|+ |+.|+++++ ..+..|++.+... .+. +|...+....+
T Consensus 223 ~~h~~~V~svaFs--g~~LASa~~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 223 NASRRKITDLKIV--DYKVVLTCP--GYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp CCCSSCCCCEEEE--TTEEEEECS--SEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred ccccCcEEEEEEE--CCEEEEEeC--CeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 3677899999999 688988875 3666666655443 222 67776654443
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=4e-26 Score=202.89 Aligned_cols=223 Identities=14% Similarity=0.073 Sum_probs=166.5
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCC----CCceeEecCCCCCCeeEEEEeeC----C---CeEEEEecCCc
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSE----GKDACILTSDSQRDVKVLEWRPN----G---GRSLSVGCKGG 167 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~----~~~~~~~~~~~~~~v~~~~~sp~----~---~~l~~~~~d~~ 167 (350)
...|++++|+| ++|++++.||.|++|++.... ......+ .+|...|.+++|+|+ + ..+++++.|+.
T Consensus 16 ~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 16 DADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 34599999999 899999999999999997532 1134444 479999999999999 8 88999999999
Q ss_pred EEEEecCCCCC-----Cceeeccc----ccccceecCC---------------CCCceEEeeecc---------------
Q 018806 168 ICIWAPSYPGN-----AASVRSGA----ASFLGALSRG---------------PGTRWTLVDFLR--------------- 208 (350)
Q Consensus 168 v~iwd~~~~~~-----~~~~~~~~----~~~~~~~~~~---------------~~~~~~~~~~~~--------------- 208 (350)
|++|++..... ...+.... ...+..+.+. .++.+.+++.-.
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 172 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT 172 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCE
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCc
Confidence 99999986554 22222111 1222223332 333333333221
Q ss_pred ----------CCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-e---c---CCCeEEEEEcCCCCEEEE
Q 018806 209 ----------SQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-R---G---FGGLSILKWSPTGDYFFA 271 (350)
Q Consensus 209 ----------~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~---~---~~~v~~~~~sp~g~~l~~ 271 (350)
..+...|.+++|+|++ .|++++.+ |.|++||+++++..... . | ...+.+++|+|++++|++
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~ 250 (397)
T 1sq9_A 173 LELQGTVESPMTPSQFATSVDISERG-LIATGFNN-GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 250 (397)
T ss_dssp EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEE
T ss_pred ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEE
Confidence 1123679999999999 99999988 79999999988766544 4 5 889999999999999999
Q ss_pred EecC---CeEEEEeCCCCcee-cccc-------------CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 272 AKFD---GTFYLWETNTWTSE-PWSS-------------TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 272 ~~~d---~~v~iwd~~~~~~~-~~~~-------------~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
++.| +.|++||+++++.. .+.. |...|.+++|+|++++|++++.+ ..+..|++..
T Consensus 251 ~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~ 322 (397)
T 1sq9_A 251 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-GKLRFWDVKT 322 (397)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-SEEEEEETTT
T ss_pred EecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-CeEEEEEcCC
Confidence 9999 99999999998873 4555 88999999999999999988733 3455555543
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.3e-26 Score=195.84 Aligned_cols=217 Identities=14% Similarity=0.128 Sum_probs=160.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|.+++|+|++++|++++.|+.+++|++.............+|...|.+++| +++.+++++.|+.|++||.. ..
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~--~~ 134 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG--SL 134 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT--EE
T ss_pred CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC--cE
Confidence 347999999999999999999999999998654333323333579999999999 45788888889999999932 21
Q ss_pred Cceeecccccccce-----------ecCCCCCceEEee------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEe
Q 018806 179 AASVRSGAASFLGA-----------LSRGPGTRWTLVD------FLRSQNGEQITALSWGPDGRYLASASYESSSFTIWD 241 (350)
Q Consensus 179 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd 241 (350)
...+. .....+.. +..+.++.+.+++ .+...+...+.+++|+|+++ +++++.+ |.|++||
T Consensus 135 ~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d-g~i~i~d 211 (313)
T 3odt_A 135 VYNLQ-AHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSND-GLIKLVD 211 (313)
T ss_dssp EEEEE-CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETT-SEEEEEE
T ss_pred EEecc-cCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCC-CeEEEEE
Confidence 11111 11111111 2333444544443 34452347899999999998 8888888 7999999
Q ss_pred CCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEECCCeE
Q 018806 242 VAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLT 319 (350)
Q Consensus 242 ~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~ 319 (350)
+++++... +..|...+.+++|+|++ .|++++.|+.|++||+++++. ..+..|...|.+++|+|+|++++.+.++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~ 290 (313)
T 3odt_A 212 MHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVR 290 (313)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred CCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEE
Confidence 99887765 44588999999999999 588999999999999999987 4566788899999999999965533355444
Q ss_pred EEEE
Q 018806 320 LGSI 323 (350)
Q Consensus 320 ~~~~ 323 (350)
+|.+
T Consensus 291 iw~~ 294 (313)
T 3odt_A 291 IFSQ 294 (313)
T ss_dssp EEES
T ss_pred EEeC
Confidence 4443
No 70
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=2.3e-25 Score=197.96 Aligned_cols=220 Identities=15% Similarity=0.166 Sum_probs=164.8
Q ss_pred ccCeeEEEEecC----C---CEEEEEECCCeEEEEEccCCCCCc-----eeEecCCC-----CCCeeEEEEe----eCCC
Q 018806 99 EVDLQGVSWHQH----K---HIVAFISGSTQVIVRDYEDSEGKD-----ACILTSDS-----QRDVKVLEWR----PNGG 157 (350)
Q Consensus 99 ~~~V~~v~~sp~----g---~~la~~s~d~~i~iw~~~~~~~~~-----~~~~~~~~-----~~~v~~~~~s----p~~~ 157 (350)
...|++++|+|+ + ++|++++.|+.|++|++.. +.. ...+ ..| ...|.+++|+ |++.
T Consensus 62 ~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~--~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITR--EDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp TTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE--CTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----C
T ss_pred CCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccC--Ccccccccceee-cccccccCCCcEEEEEEeeccCCCCc
Confidence 345999999999 9 9999999999999999975 332 3333 456 5899999999 9988
Q ss_pred e-EEEEecCCcEEEEecCC------CCCCc-----eee------cccccccceecCCC---------CCceEEe------
Q 018806 158 R-SLSVGCKGGICIWAPSY------PGNAA-----SVR------SGAASFLGALSRGP---------GTRWTLV------ 204 (350)
Q Consensus 158 ~-l~~~~~d~~v~iwd~~~------~~~~~-----~~~------~~~~~~~~~~~~~~---------~~~~~~~------ 204 (350)
. +++++.|+.|++||+.. ..... .+. ......+..+.+.+ ++.+.++
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 218 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR 218 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc
Confidence 8 88888899999999986 44443 332 11122233333333 3333333
Q ss_pred --eeccC---C---CCCceeeEEECCCCCeEEEEEeC---CCeEEEEeCCCCCceee-ee-------------cCCCeEE
Q 018806 205 --DFLRS---Q---NGEQITALSWGPDGRYLASASYE---SSSFTIWDVAQGLGTPI-RR-------------GFGGLSI 259 (350)
Q Consensus 205 --~~~~~---~---~~~~v~~~~~sp~g~~l~~~~~d---~g~i~iwd~~~~~~~~~-~~-------------~~~~v~~ 259 (350)
..+.. | . ..|.+++|+|++++|++++.+ + .|++||+++++.... .. |...+.+
T Consensus 219 ~~~~~~~~~~h~~~~-~~i~~i~~~~~~~~l~~~~~d~~~g-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 219 PLYNFESQHSMINNS-NSIRSVKFSPQGSLLAIAHDSNSFG-CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp EEEEEECCC---CCC-CCEEEEEECSSTTEEEEEEEETTEE-EEEEEETTTCCEEEEECBC--------CCBSBSSCEEE
T ss_pred eeEEEeccccccccC-CccceEEECCCCCEEEEEecCCCCc-eEEEEECCCCcccceeccCcccccccccccccCCcEEE
Confidence 24455 5 4 689999999999999999988 5 999999998876553 34 7889999
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccc------cC---------------CCCeEEEEEcCCC----------
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWS------ST---------------SGFVTGATWDPEG---------- 307 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~------~~---------------~~~v~~~~~s~~g---------- 307 (350)
++|+|++++|++++.|+.|++||+++++.. .+. .| ...|.+++|+|+|
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 999999999999999999999999998873 344 56 8899999999998
Q ss_pred CEEEEEE-CCCeEEEEE
Q 018806 308 RMILLAF-AGSLTLGSI 323 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~~ 323 (350)
++|++++ ++.+.+|.+
T Consensus 377 ~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CEEEEEETTTEEEEEEE
T ss_pred ceEEEecCCCcEEEEEc
Confidence 6888877 444444444
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=2.1e-26 Score=223.25 Aligned_cols=219 Identities=15% Similarity=0.226 Sum_probs=171.4
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|++++|||+|++||+++.||.|+|||+.. +.....+ ..|...|.+++|+|+++.+++++.|+.|++||+..+...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~--~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYET--QVEVRSI-QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEE-ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCC--CceEEEE-ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 3499999999999999999999999999954 5555555 479999999999999999999999999999999865544
Q ss_pred ceeecccccccceecCCC----------CCceEEe---------eeccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEE
Q 018806 180 ASVRSGAASFLGALSRGP----------GTRWTLV---------DFLRSQNGEQITALSWGP-DGRYLASASYESSSFTI 239 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~----------~~~~~~~---------~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~i 239 (350)
..+. .....+..+.+.+ ++.+.++ ..+.+|. ..|.+++|+| +++.|++++.| |+|++
T Consensus 91 ~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~d-g~v~v 167 (814)
T 3mkq_A 91 VDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE-HFVMCVAFNPKDPSTFASGCLD-RTVKV 167 (814)
T ss_dssp EEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS-SCEEEEEEETTEEEEEEEEETT-SEEEE
T ss_pred EEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC-CcEEEEEEEcCCCCEEEEEeCC-CeEEE
Confidence 4332 2222233333333 3333333 3445565 6899999999 88999999999 79999
Q ss_pred EeCCCCCceeee-ec-CCCeEEEEEcC--CCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 240 WDVAQGLGTPIR-RG-FGGLSILKWSP--TGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 240 wd~~~~~~~~~~-~~-~~~v~~~~~sp--~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
||+.++...... .+ ...+.+++|+| ++.+|++++.||.|++||+++++. ..+..|...|.+++|+|+|++|++++
T Consensus 168 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 168 WSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp EETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 999887655433 33 38899999999 999999999999999999999887 44667889999999999999999887
Q ss_pred -CCCeEEEEEEeC
Q 018806 315 -AGSLTLGSIHFA 326 (350)
Q Consensus 315 -~~~~~~~~~~~~ 326 (350)
++.+ ..|++.
T Consensus 248 ~dg~v--~vwd~~ 258 (814)
T 3mkq_A 248 EDGTL--KIWNSS 258 (814)
T ss_dssp TTSCE--EEEETT
T ss_pred CCCeE--EEEECC
Confidence 4444 444443
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=202.37 Aligned_cols=223 Identities=11% Similarity=0.159 Sum_probs=163.6
Q ss_pred ccCeeEEEEecC---CCEEEEEECCCeEEEEEccCCCCC-ceeEecCCCCCCeeEEEE------eeCCCeEEEEecCCcE
Q 018806 99 EVDLQGVSWHQH---KHIVAFISGSTQVIVRDYEDSEGK-DACILTSDSQRDVKVLEW------RPNGGRSLSVGCKGGI 168 (350)
Q Consensus 99 ~~~V~~v~~sp~---g~~la~~s~d~~i~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~------sp~~~~l~~~~~d~~v 168 (350)
...|.+++|+|+ +++|++++.|+.|++|++.. +. ....+ .+|...|.+++| +|+++.+++++.|+.|
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA--PEMPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS--CSSCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC--CCccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 347999999999 79999999999999999964 33 33444 589999999965 6788889999999999
Q ss_pred EEEecCCCCC-Cceeeccc---------------ccccce--ecCCCCCceEEeee-------ccCCCCCceeeEEECC-
Q 018806 169 CIWAPSYPGN-AASVRSGA---------------ASFLGA--LSRGPGTRWTLVDF-------LRSQNGEQITALSWGP- 222 (350)
Q Consensus 169 ~iwd~~~~~~-~~~~~~~~---------------~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~sp- 222 (350)
++||+..... ...+.... +.+... +..+.++.+.+++. ...|. ..|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK-NGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS-SCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC-CceEEEEcCCC
Confidence 9999986652 22222111 111111 12223344444432 23343 6899999999
Q ss_pred --CCCeEEEEEeCCCeEEEEeCCCCCcee-e-----eecCCCeEEEEEcCCCC-EEEEEecCCeEEEEeCCCCce-----
Q 018806 223 --DGRYLASASYESSSFTIWDVAQGLGTP-I-----RRGFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTS----- 288 (350)
Q Consensus 223 --~g~~l~~~~~d~g~i~iwd~~~~~~~~-~-----~~~~~~v~~~~~sp~g~-~l~~~~~d~~v~iwd~~~~~~----- 288 (350)
++++|++++.+ |.|++||+++++... + ..|...+.+++|+|+++ +|++++.||.|++||++++..
T Consensus 221 ~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 221 DISMNKLVATSLE-GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSCCEEEEEEST-TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCEEEEECCC-CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 99999999999 799999998765432 2 26788999999999998 799999999999999986432
Q ss_pred ---------------eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 289 ---------------EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 289 ---------------~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
..+..|...|++++|+|+|++|+++++.+..+..|++.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 33557889999999999999998433333345555554
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.6e-26 Score=199.87 Aligned_cols=197 Identities=10% Similarity=0.025 Sum_probs=158.1
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCC-eEEEEecCCcEEEEec-CCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGG-RSLSVGCKGGICIWAP-SYP 176 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~iwd~-~~~ 176 (350)
...|++++|+|++++|++++.|+.|++|++..............|...|.+++|+|+++ .+++++.|+.|++||+ ...
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 45699999999999999999999999999975332222223347899999999999988 8888888999999999 632
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccC--CCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC---------C
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRS--QNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ---------G 245 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~---------~ 245 (350)
. ...+.+ |. ..|.+++|+| ++.|++++.| |.|++||+++ +
T Consensus 91 ~--------------------------~~~~~~~~~~-~~v~~l~~~~-~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 91 S--------------------------FQALTNNEAN-LGICRICKYG-DDKLIAASWD-GLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp S--------------------------EEECBSCCCC-SCEEEEEEET-TTEEEEEETT-SEEEEECHHHHTTBCEEEEE
T ss_pred c--------------------------eEeccccCCC-CceEEEEeCC-CCEEEEEcCC-CeEEEEcccccccccccccC
Confidence 2 123455 64 7999999999 9999999999 6999999987 6
Q ss_pred CceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC-Cce---eccccCCCCeEEEEEcC-CCCEEEEEE-CCCeE
Q 018806 246 LGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT-WTS---EPWSSTSGFVTGATWDP-EGRMILLAF-AGSLT 319 (350)
Q Consensus 246 ~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~-~~~---~~~~~~~~~v~~~~~s~-~g~~l~~~~-~~~~~ 319 (350)
+......+...+.+++|+|++ +++++.|+.|++||+++ ++. .....+...+.+++|+| ++++|++++ ++.+.
T Consensus 142 ~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~ 219 (342)
T 1yfq_A 142 LNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVA 219 (342)
T ss_dssp SCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEE
T ss_pred CeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEE
Confidence 655555578899999999987 89999999999999998 553 23446788999999999 999999888 44445
Q ss_pred EEEEEeC
Q 018806 320 LGSIHFA 326 (350)
Q Consensus 320 ~~~~~~~ 326 (350)
+|.++..
T Consensus 220 i~~~~~~ 226 (342)
T 1yfq_A 220 VEFFDDQ 226 (342)
T ss_dssp EEECCTT
T ss_pred EEEEcCC
Confidence 5554443
No 74
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=6.2e-26 Score=204.17 Aligned_cols=206 Identities=17% Similarity=0.307 Sum_probs=157.1
Q ss_pred ccCeeEEEEecC-CCEEEEEECCCeEEEEEccCC--------CCCceeEecCCCCCCeeEEEEeeCCC-eEEEEecCCcE
Q 018806 99 EVDLQGVSWHQH-KHIVAFISGSTQVIVRDYEDS--------EGKDACILTSDSQRDVKVLEWRPNGG-RSLSVGCKGGI 168 (350)
Q Consensus 99 ~~~V~~v~~sp~-g~~la~~s~d~~i~iw~~~~~--------~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v 168 (350)
...|++++|+|+ +++||+++.+|.|++|++... .......+ .+|...|.+++|+|++. .+++++.||.|
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 446999999997 689999999999999999641 12333333 47999999999999987 77777779999
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEEEeCCCCC-
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRYLASASYESSSFTIWDVAQGL- 246 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~iwd~~~~~- 246 (350)
++|++.......... .....+.+|. ..|.+++|+| ++..|++++.+ |.|++||++++.
T Consensus 207 ~vwd~~~~~~~~~~~------------------~~~~~~~~h~-~~v~~v~~~p~~~~~l~s~~~d-g~i~i~d~~~~~~ 266 (430)
T 2xyi_A 207 CLWDINATPKEHRVI------------------DAKNIFTGHT-AVVEDVAWHLLHESLFGSVADD-QKLMIWDTRNNNT 266 (430)
T ss_dssp EEEETTSCCBGGGEE------------------ECSEEECCCS-SCEEEEEECSSCTTEEEEEETT-SEEEEEETTCSCS
T ss_pred EEEeCCCCCCCCcee------------------ccceeecCCC-CCEeeeEEeCCCCCEEEEEeCC-CeEEEEECCCCCC
Confidence 999998533221111 1123355665 7899999999 67788888888 799999999873
Q ss_pred --c-eeeeecCCCeEEEEEcCCCC-EEEEEecCCeEEEEeCCCCce--eccccCCCCeEEEEEcCCCCE-EEEEE-CCCe
Q 018806 247 --G-TPIRRGFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTS--EPWSSTSGFVTGATWDPEGRM-ILLAF-AGSL 318 (350)
Q Consensus 247 --~-~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~v~~~~~s~~g~~-l~~~~-~~~~ 318 (350)
. ..+..|...+.+++|+|+++ +|++++.||.|++||+++.+. ..+..|...|++++|+|+++. |++++ ++.+
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 3 23456889999999999987 588999999999999998442 456679999999999999975 55555 4444
Q ss_pred EEEEEEe
Q 018806 319 TLGSIHF 325 (350)
Q Consensus 319 ~~~~~~~ 325 (350)
.+|.+..
T Consensus 347 ~iwd~~~ 353 (430)
T 2xyi_A 347 HVWDLSK 353 (430)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 4444433
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-27 Score=211.83 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=154.6
Q ss_pred cCeeEEEEec-CCCEEEEEECCCeEEEEEccC---CCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCC
Q 018806 100 VDLQGVSWHQ-HKHIVAFISGSTQVIVRDYED---SEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 100 ~~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~ 175 (350)
..|++++|+| ++++||+|+.||.|+|||+.. .... .......|...|.+++|+|++..+++++.|+.|++||+..
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY-SSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC-SCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc-ceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 4599999999 999999999999999999864 2111 1122225899999999999988999999999999999952
Q ss_pred C--CCCceeecccccccceecCCCCCceEEeeecc--C--CCCCceeeEE--ECCCCCeEEEEEeCCCeEEEEeCCCCCc
Q 018806 176 P--GNAASVRSGAASFLGALSRGPGTRWTLVDFLR--S--QNGEQITALS--WGPDGRYLASASYESSSFTIWDVAQGLG 247 (350)
Q Consensus 176 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~v~~~~--~sp~g~~l~~~~~d~g~i~iwd~~~~~~ 247 (350)
. +........ .....+. . + ...+.++. +++++.+|++++.| |.|++||+++++.
T Consensus 143 ~~~~~~~~~~~~----------------~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~ 204 (437)
T 3gre_A 143 YQQESEVKFLNC----------------ECIRKINLKNFGK-NEYAVRMRAFVNEEKSLLVALTNL-SRVIIFDIRTLER 204 (437)
T ss_dssp EEETTEEEEEEE----------------EEEEEEEGGGGSS-CCCEEEEEEEECSSCEEEEEEETT-SEEEEEETTTCCE
T ss_pred ccCCceeecccc----------------ceeEEEEccCccc-ccCceEEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCee
Confidence 1 111111110 0111111 1 2 35777777 67899999999999 6999999999887
Q ss_pred eeee-e--cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-cc-cCCCCeEEEEEc----CCCCEEEEEECCCe
Q 018806 248 TPIR-R--GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WS-STSGFVTGATWD----PEGRMILLAFAGSL 318 (350)
Q Consensus 248 ~~~~-~--~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~~-~~~~~v~~~~~s----~~g~~l~~~~~~~~ 318 (350)
.... . |...|.+++|+|++++|++++.||.|++||+++++... +. .|...|.+++|+ +++++|++++. +.
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~-dg 283 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS-KT 283 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST-TE
T ss_pred eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC-CC
Confidence 6544 3 67899999999999999999999999999999988744 33 677789999555 56778887653 34
Q ss_pred EEEEEEeC
Q 018806 319 TLGSIHFA 326 (350)
Q Consensus 319 ~~~~~~~~ 326 (350)
.+..|++.
T Consensus 284 ~i~iwd~~ 291 (437)
T 3gre_A 284 FLTIWNFV 291 (437)
T ss_dssp EEEEEETT
T ss_pred cEEEEEcC
Confidence 55666654
No 76
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.4e-26 Score=192.58 Aligned_cols=221 Identities=12% Similarity=0.074 Sum_probs=154.8
Q ss_pred cchhhhhhhhhhccccccCCCCcCCCC-------ccCeeEEEEecC----CCEEEEEEC--------------------C
Q 018806 72 GLFSTLHGIISHSIKPLLHPDHVHLLP-------EVDLQGVSWHQH----KHIVAFISG--------------------S 120 (350)
Q Consensus 72 ~~~~~~~gh~~~~~~~~~~p~~~~~~~-------~~~V~~v~~sp~----g~~la~~s~--------------------d 120 (350)
.++..+++|...+....+.|+...++- ...|++++++|| ++++++++. |
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d 156 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSD 156 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTT
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCC
Confidence 345677788888888888886444332 347999999999 888887653 8
Q ss_pred CeEEEEEccCCCCCceeEecCCCCCCeeEEEEee---CCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCC
Q 018806 121 TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP---NGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGP 197 (350)
Q Consensus 121 ~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (350)
+.|++|++. ++++..... ..|...+..++|+| ++..+++++.|++|+|||+.+++..
T Consensus 157 ~~V~~~~~s-~dG~~~~s~-~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l------------------ 216 (356)
T 2w18_A 157 QQVEVMTFA-EDGGGKENQ-FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL------------------ 216 (356)
T ss_dssp CEEEEEEEC-TTSCEEEEE-EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE------------------
T ss_pred CcEEEEEEC-CCCceeeee-ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE------------------
Confidence 888888884 335444443 36788888888988 6677888888999999999865433
Q ss_pred CCceEEeeeccCCC--CCceeeEEECCCCCeE------------EEEEeCCCeEEEEeCCCCCceeee------ecCCCe
Q 018806 198 GTRWTLVDFLRSQN--GEQITALSWGPDGRYL------------ASASYESSSFTIWDVAQGLGTPIR------RGFGGL 257 (350)
Q Consensus 198 ~~~~~~~~~~~~~~--~~~v~~~~~sp~g~~l------------~~~~~d~g~i~iwd~~~~~~~~~~------~~~~~v 257 (350)
.++.+|+ ...+.+++|+|+|+.+ ++++.| ++|++||..+++..... +|...+
T Consensus 217 -------~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D-~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 217 -------KKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV-FQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp -------EEEECCC---CCCEEEEEEETTEEEEEEC------------CC-EEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred -------EEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC-cEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 3344332 1367778999999887 456677 59999999998765433 233344
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCeE-EEEEcCCCCEEEEEE-CCCeEEEE
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVT-GATWDPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v~-~~~~s~~g~~l~~~~-~~~~~~~~ 322 (350)
.+..+ ++.++++++.|++|+|||+.+++.. .+.+|...+. .++|+|||++|++|+ |+.+++|+
T Consensus 289 lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 289 LEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred Ecccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 44444 4788999999999999999999984 5566766554 689999999999887 55555554
No 77
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3.3e-25 Score=198.54 Aligned_cols=222 Identities=14% Similarity=0.118 Sum_probs=161.7
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
+...|++++|+|++++|++++.|+.|++||+.. ++....+ .+|...|.+++|+|+++.+++++.|+.|++||+....
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~--~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKD--GSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC--CcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 345799999999999999999999999999964 5555555 4799999999999999999999999999999998554
Q ss_pred CCceeeccc-----------------------ccccceecCC----------CCCceEEee--------eccCCCCCcee
Q 018806 178 NAASVRSGA-----------------------ASFLGALSRG----------PGTRWTLVD--------FLRSQNGEQIT 216 (350)
Q Consensus 178 ~~~~~~~~~-----------------------~~~~~~~~~~----------~~~~~~~~~--------~~~~~~~~~v~ 216 (350)
....+.... ......+.++ .++.+.+++ .+...+...|.
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 433332210 0111122222 233344443 22222246899
Q ss_pred eEEECCCCC-eEEEEEeCCCeEEEEeCCCCCc--eeeee-cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce----
Q 018806 217 ALSWGPDGR-YLASASYESSSFTIWDVAQGLG--TPIRR-GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS---- 288 (350)
Q Consensus 217 ~~~~sp~g~-~l~~~~~d~g~i~iwd~~~~~~--~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~---- 288 (350)
+++|+|+++ +|++++.| |.|++||+++++. ..+.. +...+.++.| +++++|++++.|+.|++||+...+.
T Consensus 295 ~~~~~~~~~~~l~~g~~d-g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~ 372 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYEN-GMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPA 372 (420)
T ss_dssp EEEECSSCTTEEEEEETT-SEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCE
T ss_pred eEEEeCCCCCEEEEEeCC-CeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccc
Confidence 999999999 89999988 7999999998754 33444 4566777754 5888999999999999999987422
Q ss_pred ------eccccCCCCeEEEEEcCCCC---EEEEEECCCeEEEEEEe
Q 018806 289 ------EPWSSTSGFVTGATWDPEGR---MILLAFAGSLTLGSIHF 325 (350)
Q Consensus 289 ------~~~~~~~~~v~~~~~s~~g~---~l~~~~~~~~~~~~~~~ 325 (350)
..+..+...|.+++|+|+++ .|+++++.+ .+..|++
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g-~~~~~~~ 417 (420)
T 3vl1_A 373 IEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNN-FCALYNL 417 (420)
T ss_dssp ECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTT-EEEEEES
T ss_pred eeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCc-eEEEEec
Confidence 23456788999999999999 555554332 4444444
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=9.9e-26 Score=198.41 Aligned_cols=222 Identities=11% Similarity=0.050 Sum_probs=164.5
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeE-ecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACI-LTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
+...|++++|+|++++|++++.|+.|++|++.. ++.... ....|...|.+++|+|+++.+++++.|+.|++||+...
T Consensus 51 h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 51 HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 128 (372)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEEET--TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT
T ss_pred CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC--CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC
Confidence 345799999999999999999999999999964 332222 22468899999999999988999989999999999855
Q ss_pred CCC---ceeecccccccceecC----------CCCCceEEee--------------------------eccCCCCCceee
Q 018806 177 GNA---ASVRSGAASFLGALSR----------GPGTRWTLVD--------------------------FLRSQNGEQITA 217 (350)
Q Consensus 177 ~~~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~--------------------------~~~~~~~~~v~~ 217 (350)
... ..+.......+..+.+ +.++.+.+++ .+.+|. ..|.+
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~ 207 (372)
T 1k8k_C 129 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-GWVHG 207 (372)
T ss_dssp TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-SCEEE
T ss_pred CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC-CeEEE
Confidence 421 1111211222222222 2334444444 233454 68999
Q ss_pred EEECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC--Cce------
Q 018806 218 LSWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT--WTS------ 288 (350)
Q Consensus 218 ~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~--~~~------ 288 (350)
++|+|++++|++++.| |.|++||+++++... +..+...+.+++|+|++++|+++ .|+.|++|++++ ++.
T Consensus 208 ~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 208 VCFSANGSRVAWVSHD-STVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EEECSSSSEEEEEETT-TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred EEECCCCCEEEEEeCC-CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence 9999999999999999 699999999887664 44567799999999999988887 899999999987 421
Q ss_pred ---------------------------------ecc-ccCCCCeEEEEEc-CCC---CEEEEEECCCeEEEEEEe
Q 018806 289 ---------------------------------EPW-SSTSGFVTGATWD-PEG---RMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 289 ---------------------------------~~~-~~~~~~v~~~~~s-~~g---~~l~~~~~~~~~~~~~~~ 325 (350)
..+ .+|...|++++|. ++| ++|++++.+ ..+..|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D-g~i~~W~~ 359 (372)
T 1k8k_C 286 DVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD-GGMSIWDV 359 (372)
T ss_dssp CCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT-SEEEEEEH
T ss_pred CccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCC-CceEEEEe
Confidence 122 3788999999966 676 899988733 24555554
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-25 Score=193.43 Aligned_cols=234 Identities=14% Similarity=0.054 Sum_probs=169.4
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|++++| |++++|++++.||.|++||+.. +.....+ ..|...|.+++|+|+++.+++++.|+.+++|++.......
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDD--QWLGTVV-YTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESS--SEEEEEE-EECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCC--CEEEEEe-ecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 4999999 9999999999999999999953 4443443 4688999999999999999999999999999987543221
Q ss_pred ee--ecccccccce--------ecCCCCCceEEee------eccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEEEeCC
Q 018806 181 SV--RSGAASFLGA--------LSRGPGTRWTLVD------FLRSQNGEQITALSWGP-DGRYLASASYESSSFTIWDVA 243 (350)
Q Consensus 181 ~~--~~~~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~iwd~~ 243 (350)
.+ .......+.. +..+.++.+.+++ .+..|. ..+.++.|+| +++.+++++.+ |.|++||..
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~ 173 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHN-ASVWDAKVVSFSENKFLTASAD-KTIKLWQND 173 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCS-SCEEEEEEEETTTTEEEEEETT-SCEEEEETT
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCC-CceeEEEEccCCCCEEEEEECC-CCEEEEecC
Confidence 11 1112222222 2333444444443 445565 7899999988 89999999999 799999943
Q ss_pred CCCceeeee-cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q 018806 244 QGLGTPIRR-GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLG 321 (350)
Q Consensus 244 ~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~ 321 (350)
.. ...+.. +...+.+++|+|++. +++++.|+.|++||+++++.. .+..|...|.+++|+|+++ |++++. +..+.
T Consensus 174 ~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~-dg~v~ 249 (313)
T 3odt_A 174 KV-IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGE-DRTVR 249 (313)
T ss_dssp EE-EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEET-TSEEE
T ss_pred ce-EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEec-CCEEE
Confidence 22 222333 778899999999998 899999999999999998874 5667999999999999995 555552 23455
Q ss_pred EEEeCCCCC--CCceeeccccccee
Q 018806 322 SIHFASKPP--SLDAHLLPVDLPDI 344 (350)
Q Consensus 322 ~~~~~~~~~--~~~~~~~~v~~~~~ 344 (350)
.|++..... .+..|..++....+
T Consensus 250 iwd~~~~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp EECTTTCCEEEEEECSSSCEEEEEE
T ss_pred EEECCCCceeEEEeccCceEEEEEE
Confidence 555544322 44455555554443
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=9.3e-26 Score=199.80 Aligned_cols=159 Identities=9% Similarity=0.145 Sum_probs=133.0
Q ss_pred ccCeeEEEEec-CCCEEEEEECCCeEEEEEccCCCCCceeEec--CCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCC
Q 018806 99 EVDLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSEGKDACILT--SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 99 ~~~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~ 175 (350)
...|.+++|+| ++++|++++.|+.|++||+.. .....+. ..|...|.+++|+|++..+++++.|+.|++||+.
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~- 193 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD- 193 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-
Confidence 34799999999 789999999999999999963 3333332 2345789999999999999999999999999985
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCC-eEEEEEeCCCeEEEEeCCC----CCceee
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-YLASASYESSSFTIWDVAQ----GLGTPI 250 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~g~i~iwd~~~----~~~~~~ 250 (350)
.. ....+.+|. ..|.+++|+|+++ .|++++.| |+|++||+++ +.....
T Consensus 194 ~~-------------------------~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 194 GH-------------------------EIFKEKLHK-AKVTHAEFNPRCDWLMATSSVD-ATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp SC-------------------------EEEEEECSS-SCEEEEEECSSCTTEEEEEETT-SEEEEEEGGGCCSTTCEEEE
T ss_pred CC-------------------------EEEEeccCC-CcEEEEEECCCCCCEEEEEeCC-CEEEEEeCCCCCcccceEEE
Confidence 22 133456665 7999999999999 88999989 6999999998 445555
Q ss_pred eecCCCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCCce
Q 018806 251 RRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 251 ~~~~~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
..|...+.+++|+| ++++|++++.|+.|++||+++++.
T Consensus 247 ~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 247 MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 67889999999999 999999999999999999998776
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.4e-26 Score=204.55 Aligned_cols=222 Identities=13% Similarity=0.215 Sum_probs=168.2
Q ss_pred CeeEEEEecCCC-EEEEE----------ECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEE
Q 018806 101 DLQGVSWHQHKH-IVAFI----------SGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGIC 169 (350)
Q Consensus 101 ~V~~v~~sp~g~-~la~~----------s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~ 169 (350)
.|.+++|+|+++ +|+++ +.|+.|+||++......... ....|...|.+++|+|+++.+++++.|+.|+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPI-ASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCS-CCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEE-EEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 588999999997 99998 88999999999642211112 2235888999999999998898888999999
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-CCeEEEEEeCCCeEEEEeCCCCC--
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRYLASASYESSSFTIWDVAQGL-- 246 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd~~~~~-- 246 (350)
+||+....... .....+.+|. ..|.+++|+|+ +++|++++.| |.|++||+.+++
T Consensus 93 vw~~~~~~~~~---------------------~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~ 149 (416)
T 2pm9_A 93 LYSTNEANNAI---------------------NSMARFSNHS-SSVKTVKFNAKQDNVLASGGNN-GEIFIWDMNKCTES 149 (416)
T ss_dssp EECCSSTTSCC---------------------CEEEECCCSS-SCCCEEEECSSSTTBEEEECSS-SCEEBCBTTTTSSC
T ss_pred Eeecccccccc---------------------cchhhccCCc-cceEEEEEcCCCCCEEEEEcCC-CeEEEEECCCCccc
Confidence 99998421111 1244466775 79999999998 8899999999 699999999876
Q ss_pred ----cee----eeecCCCeEEEEEcCC-CCEEEEEecCCeEEEEeCCCCceec-cccC------CCCeEEEEEcCCC-CE
Q 018806 247 ----GTP----IRRGFGGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEP-WSST------SGFVTGATWDPEG-RM 309 (350)
Q Consensus 247 ----~~~----~~~~~~~v~~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~~~-~~~~------~~~v~~~~~s~~g-~~ 309 (350)
... ...|...+.+++|+|+ +.+|++++.|+.|++||+++++... +..+ ...+.+++|+|++ .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (416)
T 2pm9_A 150 PSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTR 229 (416)
T ss_dssp TTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTE
T ss_pred cccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCE
Confidence 222 2357788999999999 7899999999999999999988743 3333 7889999999998 56
Q ss_pred EEEEECCC--eEEEEEEeCC--CC-CCCc-eeecccccceeec
Q 018806 310 ILLAFAGS--LTLGSIHFAS--KP-PSLD-AHLLPVDLPDIVS 346 (350)
Q Consensus 310 l~~~~~~~--~~~~~~~~~~--~~-~~~~-~~~~~v~~~~~~~ 346 (350)
|++++.+. ..+..|++.. .. ..+. +|..+|....+.+
T Consensus 230 l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 230 VATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp EEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECS
T ss_pred EEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCC
Confidence 77766331 1444555543 22 2555 7888887776654
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.8e-25 Score=199.58 Aligned_cols=203 Identities=7% Similarity=-0.010 Sum_probs=163.2
Q ss_pred ccCeeEEEEecCCCEE-EEEECCCeEEEEEccCCCCCceeEecC-CCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC
Q 018806 99 EVDLQGVSWHQHKHIV-AFISGSTQVIVRDYEDSEGKDACILTS-DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~l-a~~s~d~~i~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
...|++++|+|++++| ++++.|+.|+||++...++.....+.. .|...|.+++|+|+++.+++++.++.+++|++...
T Consensus 102 ~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~ 181 (450)
T 2vdu_B 102 YSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSI 181 (450)
T ss_dssp CCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred CCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCc
Confidence 4579999999999996 888899999999996223555454422 46788999999999989999888999999999744
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC---CCeEEEEEeCCCeEEEEeCCCCCceee--e
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD---GRYLASASYESSSFTIWDVAQGLGTPI--R 251 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---g~~l~~~~~d~g~i~iwd~~~~~~~~~--~ 251 (350)
..... ....+.+|. ..|.+++|+|+ +++|++++.| |+|++||+++++.... .
T Consensus 182 ~~~~~---------------------~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~d-~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 182 PEEKF---------------------TQEPILGHV-SMLTDVHLIKDSDGHQFIITSDRD-EHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp CCSSC---------------------CCCCSEECS-SCEEEEEEEECTTSCEEEEEEETT-SCEEEEEESCTTCEEEECC
T ss_pred ccccc---------------------cceeeeccc-CceEEEEEcCCCCCCcEEEEEcCC-CcEEEEECCCCceeeeeec
Confidence 33210 011245565 79999999999 9999999999 6999999998876543 3
Q ss_pred ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--------------------------cCCCCeEEEEEcC
Q 018806 252 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--------------------------STSGFVTGATWDP 305 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~s~ 305 (350)
.|...|.+++|+ ++++|++++.|+.|++||+++++..... .....|.+++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 688999999999 9999999999999999999998863221 2235689999999
Q ss_pred CCCEEEEEECCCeEEEEEEe
Q 018806 306 EGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 306 ~g~~l~~~~~~~~~~~~~~~ 325 (350)
++++|++++..+..+..|++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 99999999855667777777
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=195.18 Aligned_cols=197 Identities=10% Similarity=0.034 Sum_probs=148.6
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccC-------CCCCceeEecCCCCCCeeEEEEee--CCCeEEEEecCCcEEE
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYED-------SEGKDACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICI 170 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~-------~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i 170 (350)
..|.++.|+|+ +++++.|+++++|+.+. .++........+|...|.+++|+| +++.+++++.|++|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 35777888888 89999999999997642 123334444446778999999999 9888888999999999
Q ss_pred EecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce--
Q 018806 171 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT-- 248 (350)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~-- 248 (350)
||+..... ......++...+.+++|+|+|++|++++.| |.|++||+++++..
T Consensus 154 wd~~~~~~-------------------------~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-g~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 154 QSYEDDSQ-------------------------YIVHSAKSDVEYSSGVLHKDSLLLALYSPD-GILDVYNLSSPDQASS 207 (343)
T ss_dssp EESSSSCE-------------------------EEEECCCSSCCCCEEEECTTSCEEEEECTT-SCEEEEESSCTTSCCE
T ss_pred EECCCCcE-------------------------EEEEecCCCCceEEEEECCCCCEEEEEcCC-CEEEEEECCCCCCCcc
Confidence 99984332 112223333579999999999999999999 79999999998865
Q ss_pred eeee-cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccc---cCCCCeE--EEEEcCCCCEEEEEECCCeEEE
Q 018806 249 PIRR-GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWS---STSGFVT--GATWDPEGRMILLAFAGSLTLG 321 (350)
Q Consensus 249 ~~~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~---~~~~~v~--~~~~s~~g~~l~~~~~~~~~~~ 321 (350)
.+.. |...|.+++|+|+|.+|++++ ++.|++||+++++.. .+. .+...+. +++|+|+|++|++++.++..+.
T Consensus 208 ~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 208 RFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLT 286 (343)
T ss_dssp ECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEE
Confidence 4555 789999999999999999999 559999999988763 222 2333443 6999999999999775344555
Q ss_pred EEEeC
Q 018806 322 SIHFA 326 (350)
Q Consensus 322 ~~~~~ 326 (350)
.|++.
T Consensus 287 v~~~~ 291 (343)
T 3lrv_A 287 IYKFD 291 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 55553
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=6e-25 Score=195.91 Aligned_cols=238 Identities=18% Similarity=0.269 Sum_probs=176.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.+.+++|++ ..+++++.|+.|++|++.. +.........|...|.+++|+|++..+++++.|+.|++||+.......
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~--~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADS--GSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR 170 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTT--CCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCC--CcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE
Confidence 466677775 4577888999999999964 555555555588999999999998888888889999999998655443
Q ss_pred eeecccccccce--------ecCCCCCceEEee---------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCC
Q 018806 181 SVRSGAASFLGA--------LSRGPGTRWTLVD---------FLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVA 243 (350)
Q Consensus 181 ~~~~~~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~ 243 (350)
.+. .....+.. +..+.++.+.+++ .+.+|. ..|.+++|+|++++|++++.| |.|++||++
T Consensus 171 ~~~-~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d-~~v~iwd~~ 247 (401)
T 4aez_A 171 TMA-GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS-SEVCGLAWRSDGLQLASGGND-NVVQIWDAR 247 (401)
T ss_dssp EEC-CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-SCEEEEEECTTSSEEEEEETT-SCEEEEETT
T ss_pred Eec-CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCC-CCeeEEEEcCCCCEEEEEeCC-CeEEEccCC
Confidence 332 22222222 2233344444433 455665 799999999999999999999 699999999
Q ss_pred CCCcee-eeecCCCeEEEEEcCCCCE-EEEEe--cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCe
Q 018806 244 QGLGTP-IRRGFGGLSILKWSPTGDY-FFAAK--FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSL 318 (350)
Q Consensus 244 ~~~~~~-~~~~~~~v~~~~~sp~g~~-l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~ 318 (350)
+++... +..|...+.+++|+|++.. +++++ .|+.|++||+++++......+...+.+++|+|++++|++++ ..+.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCC
Confidence 887665 4467889999999998754 55554 69999999999998876667788999999999999999875 2344
Q ss_pred EEEEEEeCCC--CC--CCceeecccccceee
Q 018806 319 TLGSIHFASK--PP--SLDAHLLPVDLPDIV 345 (350)
Q Consensus 319 ~~~~~~~~~~--~~--~~~~~~~~v~~~~~~ 345 (350)
.+..|++... .. .+.+|..+|....+.
T Consensus 328 ~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred cEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 5555655542 11 345677777665554
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=6.1e-26 Score=199.13 Aligned_cols=217 Identities=11% Similarity=0.175 Sum_probs=165.0
Q ss_pred ccCeeEEEEecC----CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEee-CCCeEEEEecCCcEEEEec
Q 018806 99 EVDLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAP 173 (350)
Q Consensus 99 ~~~V~~v~~sp~----g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~iwd~ 173 (350)
...|++++|+|+ +++|++++.||.|++||+.. ++....+ .+|...|.+++|+| ++..+++++.|+.|++||+
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~--~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT--MQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT--CCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh--ceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 456999999999 67999999999999999954 5555555 47999999999999 7778888888999999999
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-- 251 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-- 251 (350)
........ ...+.+|. ..|.+++|+|++++|++++.| |.|++||+++++.....
T Consensus 146 ~~~~~~~~----------------------~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 146 QTDTLVAI----------------------FGGVEGHR-DEVLSADYDLLGEKIMSCGMD-HSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp TTTEEEEE----------------------ECSTTSCS-SCEEEEEECTTSSEEEEEETT-SCEEEEESCSHHHHHHHHH
T ss_pred ecCeEEEE----------------------eccccccc-CceeEEEECCCCCEEEEecCC-CCEEEEECCCCccccccce
Confidence 84322111 11124564 799999999999999999999 69999999976433211
Q ss_pred ---------------------------ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce---------------e
Q 018806 252 ---------------------------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS---------------E 289 (350)
Q Consensus 252 ---------------------------~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~---------------~ 289 (350)
.|...|.+++|+ +++|++++.|+.|++||+++++. .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILG 279 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEE
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheec
Confidence 177889999998 77999999999999999987643 2
Q ss_pred ccccCCCCeEEEEEcCC--CCEEEEEECCCeEEEEEEeCCCCC------CCcee--ecccccceee
Q 018806 290 PWSSTSGFVTGATWDPE--GRMILLAFAGSLTLGSIHFASKPP------SLDAH--LLPVDLPDIV 345 (350)
Q Consensus 290 ~~~~~~~~v~~~~~s~~--g~~l~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~v~~~~~~ 345 (350)
.+..|...|++++|+|+ |++|++++.+ ..+..|++..... .+..| ..+|....+.
T Consensus 280 ~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 280 RFDYSQCDIWYMRFSMDFWQKMLALGNQV-GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp EEECSSCCSSCCCCEECTTSSEEEEECTT-SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEEC
T ss_pred cccccCCcEEEEEEcCCCCCcEEEEEecC-CcEEEEECCCCCCccccceEEcccccCCceEEEEeC
Confidence 34467888999999999 9999988632 2444555543221 34444 5666555544
No 86
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.7e-26 Score=209.34 Aligned_cols=229 Identities=12% Similarity=0.038 Sum_probs=157.8
Q ss_pred ccCeeEEEEecCC---------CEEEE-------------------EECCCeEEEEEccCCCCCce-eEecCCCCCCeeE
Q 018806 99 EVDLQGVSWHQHK---------HIVAF-------------------ISGSTQVIVRDYEDSEGKDA-CILTSDSQRDVKV 149 (350)
Q Consensus 99 ~~~V~~v~~sp~g---------~~la~-------------------~s~d~~i~iw~~~~~~~~~~-~~~~~~~~~~v~~ 149 (350)
+..|.+|+|+|++ ++||+ ++.|++|+||++........ ......|.+.|.+
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 4578888888876 56666 45788999999965322111 1112356788999
Q ss_pred EEEeeC------CCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC
Q 018806 150 LEWRPN------GGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD 223 (350)
Q Consensus 150 ~~~sp~------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 223 (350)
++|+|+ ++.|++++.|++|++||+............. -.....+.+|. ..|++++|+++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~--------------~~p~~~l~~h~-~~v~sv~~s~~ 277 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC--------------EKPSLTLSLAD-SLITTFDFLSP 277 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC--------------CSCSEEECCTT-TCEEEEEESSS
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee--------------cCceEEEEcCC-CCEEEEEecCC
Confidence 999997 4577778889999999997443211000000 00012356675 79999999986
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCc-e-eeeecCCCeEEE--EEcCCC-CEEEEEecCCeEEEEeCCCCcee-ccccCC--
Q 018806 224 GRYLASASYESSSFTIWDVAQGLG-T-PIRRGFGGLSIL--KWSPTG-DYFFAAKFDGTFYLWETNTWTSE-PWSSTS-- 295 (350)
Q Consensus 224 g~~l~~~~~d~g~i~iwd~~~~~~-~-~~~~~~~~v~~~--~~sp~g-~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~-- 295 (350)
+ .|++++.| |+|++||++++.. . .+..|...|.++ +|+|+| ++|++++.|++|+|||+++++.. .+..|.
T Consensus 278 ~-~lasgs~D-gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 278 T-TVVCGFKN-GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp S-EEEEEETT-SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred C-eEEEEeCC-CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 4 79999999 7999999997643 2 356788999999 578888 89999999999999999987653 333443
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC--CCCceeecccccceee
Q 018806 296 GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP--PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 296 ~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 345 (350)
..|.+++|+|+++.+++++++. .+..|++.... ..+.+|..+|....++
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~-tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGAS-SLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSS-EEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred CcccceEeCCCcCeEEEeCCCC-cEEEEECcccccceeeecCCCceEEEEeC
Confidence 3578999999999988776433 45555554332 3566888888766654
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=3.3e-25 Score=200.03 Aligned_cols=207 Identities=13% Similarity=0.180 Sum_probs=151.0
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeE------ecCCCCCCeeEEEEeeCC-CeEEEEecCCcEEE
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACI------LTSDSQRDVKVLEWRPNG-GRSLSVGCKGGICI 170 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~i 170 (350)
+...|++++|+|++++|+++ .|+.|++||+.. .+..... ...+|...|.+++|+|++ ..+++++.|+.|++
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEI-TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTE-EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCC-CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 45689999999999999998 899999999952 1222221 134789999999999998 78888888999999
Q ss_pred EecCCCCCC----ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC-C
Q 018806 171 WAPSYPGNA----ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ-G 245 (350)
Q Consensus 171 wd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~-~ 245 (350)
||+...... ..+.... .......+.+|. ..|.+++|+|+|++|++++. |.|++||++. +
T Consensus 254 wd~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~ 317 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPE-------------DPSNRSFFSEII-SSISDVKFSHSGRYMMTRDY--LSVKVWDLNMEN 317 (447)
T ss_dssp EETTTCSSSCTTCEEECCC------------------CCHHHHHT-TCEEEEEECTTSSEEEEEES--SEEEEEETTCCS
T ss_pred EECcCCccccceeeEeccCC-------------CccccccccccC-ceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCc
Confidence 999855431 1111100 000000111222 48999999999999998877 4999999987 6
Q ss_pred Cceeee-ecCCC---------------eEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-----------------
Q 018806 246 LGTPIR-RGFGG---------------LSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS----------------- 292 (350)
Q Consensus 246 ~~~~~~-~~~~~---------------v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~----------------- 292 (350)
+..... .|... +..++|+|++++|++++.||.|++||+.+++...+.
T Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (447)
T 3dw8_B 318 RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKV 397 (447)
T ss_dssp SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCE
T ss_pred cccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccc
Confidence 554433 33221 334999999999999999999999999988764322
Q ss_pred ----------------cCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 018806 293 ----------------STSGFVTGATWDPEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 293 ----------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~ 322 (350)
.+...|..++|+|+|.+|++++.+...+|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred cccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeec
Confidence 234568899999999999999876655553
No 88
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.5e-25 Score=216.85 Aligned_cols=189 Identities=9% Similarity=0.113 Sum_probs=151.1
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|++++|+|++++||+|+.||.|+||+... .+.. ....|...|.+++|+| |+.+++++.|++|++||+..+..
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~--~~~~--~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~- 91 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ--VEVV--IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV- 91 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTT--CEEE--EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE-
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCC--cEEE--EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE-
Confidence 4599999999999999999999999999842 3322 2235788999999999 68888888999999999984432
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee----------
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP---------- 249 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~---------- 249 (350)
...+. |. ..|++++|+|++++|++++.| |+|++||+++++...
T Consensus 92 ------------------------~~~~~-~~-~~V~~v~~sp~g~~l~sgs~d-g~V~lwd~~~~~~~~~~i~~~~~~~ 144 (902)
T 2oaj_A 92 ------------------------LTTVF-VP-GKITSIDTDASLDWMLIGLQN-GSMIVYDIDRDQLSSFKLDNLQKSS 144 (902)
T ss_dssp ------------------------EEEEE-CS-SCEEEEECCTTCSEEEEEETT-SCEEEEETTTTEEEEEEECCHHHHH
T ss_pred ------------------------EEEEc-CC-CCEEEEEECCCCCEEEEEcCC-CcEEEEECCCCccccceeccccccc
Confidence 22232 33 689999999999999999999 799999999876531
Q ss_pred --eeecCCCeEEEEEcCC-CCEEEEEecCCeEEEEeCCCCceec-cccC------------------CCCeEEEEEcCCC
Q 018806 250 --IRRGFGGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEP-WSST------------------SGFVTGATWDPEG 307 (350)
Q Consensus 250 --~~~~~~~v~~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~~~-~~~~------------------~~~v~~~~~s~~g 307 (350)
...|.+.|.+++|+|+ +..|++++.|+.| +||+++++... +..| ...|.+++|+|+|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 2346789999999996 5788999999999 99999987642 3222 4679999999999
Q ss_pred CEEEEEE-CCCeEEEE
Q 018806 308 RMILLAF-AGSLTLGS 322 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~ 322 (350)
++|++++ ++.+.+|+
T Consensus 224 ~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 224 LHIITIHEDNSLVFWD 239 (902)
T ss_dssp SEEEEEETTCCEEEEE
T ss_pred CEEEEEECCCeEEEEE
Confidence 9999887 44444443
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=1.3e-24 Score=194.95 Aligned_cols=240 Identities=16% Similarity=0.287 Sum_probs=178.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec-CCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
.+.++.|+||++ ++||+| .|++|+|||..+ ++....+. .+|...|++++|+|+|+.+++++.|+.|+|||+....
T Consensus 105 d~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~t--g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 105 DYYLNLVDWSSG-NVLAVA-LDNSVYLWSASS--GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp CTTCBCEEECTT-SEEEEE-ETTEEEEEETTT--CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cccceeEEECCC-CEEEEE-eCCEEEEEECCC--CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 456788999975 577776 499999999964 55444332 3678889999999999999999999999999998654
Q ss_pred CCceeecccccccce--------ecCCCCCceE---------EeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEE
Q 018806 178 NAASVRSGAASFLGA--------LSRGPGTRWT---------LVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIW 240 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iw 240 (350)
....+. +....+.. .+.+.++... ....+.+|. ..+..+.|+|+++++++++.| |.+++|
T Consensus 181 ~~~~~~-~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~-~~~~~~~~~~~g~~l~s~~~D-~~v~i~ 257 (420)
T 4gga_A 181 RLRNMT-SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS-QEVCGLRWAPDGRHLASGGND-NLVNVW 257 (420)
T ss_dssp EEEEEC-CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-SCEEEEEECTTSSEEEEEETT-SCEEEE
T ss_pred EEEEEe-CCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccc-cceeeeeecCCCCeeeeeecc-ccceEE
Confidence 433332 11112221 1222233333 234566776 689999999999999999999 699999
Q ss_pred eCCCCCc-----eeeeecCCCeEEEEEcCCCC-EEEEE--ecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEE
Q 018806 241 DVAQGLG-----TPIRRGFGGLSILKWSPTGD-YFFAA--KFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 241 d~~~~~~-----~~~~~~~~~v~~~~~sp~g~-~l~~~--~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 312 (350)
+..+++. .....+...|.+++|+|++. .++++ +.|++|++||+.+++......+...+.++.|+|+++.+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELIS 337 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEE
Confidence 9988753 23445778999999999765 44443 5799999999999998766667778999999999999998
Q ss_pred EE-CCCeEEEEEEeCCCCC--CCceeecccccceee
Q 018806 313 AF-AGSLTLGSIHFASKPP--SLDAHLLPVDLPDIV 345 (350)
Q Consensus 313 ~~-~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~ 345 (350)
++ ..+..+..|++....+ .+.+|..+|....+.
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 373 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 76 3456677777765443 677899988877665
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=4.8e-25 Score=193.38 Aligned_cols=197 Identities=18% Similarity=0.272 Sum_probs=152.7
Q ss_pred ccCeeEEEEecC----CCEEEEEECCCeEEEEEccCCCCCceeEec----CCCCCCeeEEEEeeC----CCeEEEEecCC
Q 018806 99 EVDLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSEGKDACILT----SDSQRDVKVLEWRPN----GGRSLSVGCKG 166 (350)
Q Consensus 99 ~~~V~~v~~sp~----g~~la~~s~d~~i~iw~~~~~~~~~~~~~~----~~~~~~v~~~~~sp~----~~~l~~~~~d~ 166 (350)
..+|++++|+|+ ...+++++.++.|++|++.. +.....+. ..|...|.+++|+|+ +..+++++.|+
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS--QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG--GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC--CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 345999999984 45666667777999999964 33322221 136788999999999 55788888899
Q ss_pred cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-CCCeEEEEEeCCCeEEEEeCCCC
Q 018806 167 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRYLASASYESSSFTIWDVAQG 245 (350)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d~g~i~iwd~~~~ 245 (350)
.|++||+..... ...+.+|. ..|.+++|+| ++++|++++.| |.|++||++++
T Consensus 96 ~i~v~d~~~~~~-------------------------~~~~~~~~-~~i~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~ 148 (366)
T 3k26_A 96 IIRIINPITMQC-------------------------IKHYVGHG-NAINELKFHPRDPNLLLSVSKD-HALRLWNIQTD 148 (366)
T ss_dssp EEEEECTTTCCE-------------------------EEEEESCC-SCEEEEEECSSCTTEEEEEETT-SCEEEEETTTT
T ss_pred EEEEEEchhceE-------------------------eeeecCCC-CcEEEEEECCCCCCEEEEEeCC-CeEEEEEeecC
Confidence 999999984332 33456665 7999999999 89999999999 79999999998
Q ss_pred Cceeee----ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-cc----------------------------
Q 018806 246 LGTPIR----RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WS---------------------------- 292 (350)
Q Consensus 246 ~~~~~~----~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~~---------------------------- 292 (350)
+..... .|...|.+++|+|++++|++++.|+.|++||+++++... +.
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 776654 578899999999999999999999999999999876522 21
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 293 STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 293 ~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.|...|.+++|+ +++|++++. +..+..|++..
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~-d~~i~~wd~~~ 260 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSC-ENAIVCWKPGK 260 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECS-SSEEEEEEESS
T ss_pred CCcceEEEEEEc--CCEEEEEec-CCEEEEEeCCC
Confidence 288899999999 778887763 23455555543
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.8e-25 Score=196.67 Aligned_cols=216 Identities=14% Similarity=0.232 Sum_probs=163.8
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCC---------------eeEEEEeeCCCeEEEEe
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRD---------------VKVLEWRPNGGRSLSVG 163 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~---------------v~~~~~sp~~~~l~~~~ 163 (350)
...|.+++|+|++++|++++.|+.|++|++.. ++....+ ..+... +.+++|+|+ ..+++++
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 224 (425)
T 1r5m_A 149 RAPIVSVKWNKDGTHIISMDVENVTILWNVIS--GTVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPG 224 (425)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCCEEEEETTT--TEEEEEE-CCC---------------CCCBSCCEEEET-TEEEEEC
T ss_pred CccEEEEEECCCCCEEEEEecCCeEEEEECCC--CcEEEEe-eccccCccceeeccccCCcceeeEEEEcCC-CEEEEEc
Confidence 34799999999999999999999999999954 5544444 344444 999999998 6788888
Q ss_pred cCCcEEEEecCCCCCCceeecccccccceecCC----------CCCceEEee--------eccCCCCCceeeEEECCCCC
Q 018806 164 CKGGICIWAPSYPGNAASVRSGAASFLGALSRG----------PGTRWTLVD--------FLRSQNGEQITALSWGPDGR 225 (350)
Q Consensus 164 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~--------~~~~~~~~~v~~~~~sp~g~ 225 (350)
.++.|++||+........+. .....+..+.+. .++.+.+++ .+.+|. ..|.+++|+|++
T Consensus 225 ~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~- 301 (425)
T 1r5m_A 225 PKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS-QSIVSASWVGDD- 301 (425)
T ss_dssp GGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCS-SCEEEEEEETTT-
T ss_pred CCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCC-ccEEEEEECCCC-
Confidence 89999999998654433332 222223333332 233444443 344554 689999999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCceee-eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCc-----------------
Q 018806 226 YLASASYESSSFTIWDVAQGLGTPI-RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT----------------- 287 (350)
Q Consensus 226 ~l~~~~~d~g~i~iwd~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~----------------- 287 (350)
.+++++.+ |.|++||+++++.... ..+...+.+++|+|++++|++++.|+.|++||+++++
T Consensus 302 ~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 302 KVISCSMD-GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEEEEETT-SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CE
T ss_pred EEEEEeCC-CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcc
Confidence 89999988 6999999998876654 4567899999999999999999999999999998877
Q ss_pred ---e-eccccCCC--CeEEEEEcCCCCEEEEEE-CCCeEEEE
Q 018806 288 ---S-EPWSSTSG--FVTGATWDPEGRMILLAF-AGSLTLGS 322 (350)
Q Consensus 288 ---~-~~~~~~~~--~v~~~~~s~~g~~l~~~~-~~~~~~~~ 322 (350)
. ..+..|.. .|.+++|+|++++|++++ ++.+.+|.
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEe
Confidence 3 34556655 999999999999999887 44455444
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.5e-24 Score=195.23 Aligned_cols=203 Identities=14% Similarity=0.268 Sum_probs=152.3
Q ss_pred ccCeeEEEEecCCC-EEEEEECCCeEEEEEccCCCCC-ce---eEecCCCCCCeeEEEEeeC-CCeEEEEecCCcEEEEe
Q 018806 99 EVDLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSEGK-DA---CILTSDSQRDVKVLEWRPN-GGRSLSVGCKGGICIWA 172 (350)
Q Consensus 99 ~~~V~~v~~sp~g~-~la~~s~d~~i~iw~~~~~~~~-~~---~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~v~iwd 172 (350)
...|++++|+|++. +|++++.||.|++|++...... .. .....+|...|.+++|+|+ +..+++++.|+.|++||
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 34789999999998 9999999999999999642211 11 1223478999999999994 44555666789999999
Q ss_pred cCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCC-eEEEEEeCCCeEEEEeCCCC-Cc-ee
Q 018806 173 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-YLASASYESSSFTIWDVAQG-LG-TP 249 (350)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~g~i~iwd~~~~-~~-~~ 249 (350)
++....... ...+..|. ..|.+++|+|+++ .|++++.| |.|++||++.. .. ..
T Consensus 261 ~~~~~~~~~----------------------~~~~~~~~-~~v~~i~~~p~~~~~l~tg~~d-g~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 261 TRNNNTSKP----------------------SHTVDAHT-AEVNCLSFNPYSEFILATGSAD-KTVALWDLRNLKLKLHS 316 (430)
T ss_dssp TTCSCSSSC----------------------SEEEECCS-SCEEEEEECSSCTTEEEEEETT-SEEEEEETTCTTSCSEE
T ss_pred CCCCCCCcc----------------------eeEeecCC-CCeEEEEeCCCCCCEEEEEeCC-CeEEEEeCCCCCCCeEE
Confidence 985432111 12234554 7899999999998 47788888 79999999984 33 34
Q ss_pred eeecCCCeEEEEEcCCCC-EEEEEecCCeEEEEeCCCCc--------------e-eccccCCCCeEEEEEcCCCC-EEEE
Q 018806 250 IRRGFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWT--------------S-EPWSSTSGFVTGATWDPEGR-MILL 312 (350)
Q Consensus 250 ~~~~~~~v~~~~~sp~g~-~l~~~~~d~~v~iwd~~~~~--------------~-~~~~~~~~~v~~~~~s~~g~-~l~~ 312 (350)
+..|...|.+++|+|+++ +|++++.|+.|+|||+.... . .....|...|.+++|+|+++ +|++
T Consensus 317 ~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 317 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEE
T ss_pred eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEE
Confidence 556889999999999985 68899999999999998722 2 33457888999999999999 5665
Q ss_pred EECCCeEEEEEEeC
Q 018806 313 AFAGSLTLGSIHFA 326 (350)
Q Consensus 313 ~~~~~~~~~~~~~~ 326 (350)
++ .+..+..|++.
T Consensus 397 ~s-~dg~i~iw~~~ 409 (430)
T 2xyi_A 397 VS-EDNIMQVWQMA 409 (430)
T ss_dssp EE-TTSEEEEEEEC
T ss_pred EE-CCCCEEEeEcc
Confidence 55 33455555554
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=5e-25 Score=222.86 Aligned_cols=217 Identities=14% Similarity=0.197 Sum_probs=169.5
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
+...|++++|+|+|++||+|+.||.|++||+.. +.....+ .+|...|.+++|+|+++.+++++.|+.|++||+..+.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~--~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAET--GEKLLDI-KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCC--CCEEEEe-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 346799999999999999999999999999954 5655555 4899999999999999999999999999999998443
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC--CCCeEEEEEeCCCeEEEEeCCCCCcee-eeecC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP--DGRYLASASYESSSFTIWDVAQGLGTP-IRRGF 254 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~ 254 (350)
. ...+.+|. ..|.+++|+| ++..+++++.| |.|++||+.+++... +..|.
T Consensus 691 ~-------------------------~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~d-~~v~vwd~~~~~~~~~~~~h~ 743 (1249)
T 3sfz_A 691 L-------------------------VHTYDEHS-EQVNCCHFTNKSNHLLLATGSND-FFLKLWDLNQKECRNTMFGHT 743 (1249)
T ss_dssp E-------------------------EEEEECCS-SCEEEEEECSSSSCCEEEEEETT-SCEEEEETTSSSEEEEECCCS
T ss_pred e-------------------------EEEEcCCC-CcEEEEEEecCCCceEEEEEeCC-CeEEEEECCCcchhheecCCC
Confidence 2 34456675 7999999999 45578888888 799999999988664 55688
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecc-------------------------------------------
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW------------------------------------------- 291 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~------------------------------------------- 291 (350)
..|.+++|+|++++|++++.||.|++||+++++....
T Consensus 744 ~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~ 823 (1249)
T 3sfz_A 744 NSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLL 823 (1249)
T ss_dssp SCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEE
T ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEE
Confidence 9999999999999999999999999999977643110
Q ss_pred -------------ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC--CCCceeecccccceee
Q 018806 292 -------------SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP--PSLDAHLLPVDLPDIV 345 (350)
Q Consensus 292 -------------~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 345 (350)
..|...+.+++|+|+++++++++.+ ..+..|++.... ..+.+|..+|....+.
T Consensus 824 ~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~h~~~v~~v~~s 891 (1249)
T 3sfz_A 824 FDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ-YCVELWNIDSRLKVADCRGHLSWVHGVMFS 891 (1249)
T ss_dssp EETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS-SCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-CeEEEEEcCCCceeeecCCCccceEEEEEC
Confidence 1455677888888888888877532 234444444332 2455677766655554
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=1.4e-25 Score=202.21 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=160.7
Q ss_pred hhhhhhhhhccccccCCCCc-CCCCc--------------------------cCeeEEEEecCCCEEEEEECCCeEEEEE
Q 018806 75 STLHGIISHSIKPLLHPDHV-HLLPE--------------------------VDLQGVSWHQHKHIVAFISGSTQVIVRD 127 (350)
Q Consensus 75 ~~~~gh~~~~~~~~~~p~~~-~~~~~--------------------------~~V~~v~~sp~g~~la~~s~d~~i~iw~ 127 (350)
..+.||.+.+....+.|.+. .++.+ ..+.+++|+|++++|++|+.||.|++||
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 34568888888877877533 22221 1467899999999999999999999999
Q ss_pred ccCCCCCceeEecCCCCCCeeEEEEeeCCCeEE-EEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeee
Q 018806 128 YEDSEGKDACILTSDSQRDVKVLEWRPNGGRSL-SVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDF 206 (350)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (350)
+. ++....+ .+|...|.+++|+|++..++ +++.|+.|++||+........+. .
T Consensus 238 ~~---~~~~~~~-~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~----------------------~ 291 (435)
T 4e54_B 238 MD---GKELWNL-RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL----------------------Y 291 (435)
T ss_dssp SS---SCBCCCS-BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS----------------------B
T ss_pred cC---cceeEEE-ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE----------------------E
Confidence 85 3333333 47999999999999987655 55668999999998544332221 1
Q ss_pred ccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee-eecC------CCeEEEEEcCCCCEEEEEe------
Q 018806 207 LRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI-RRGF------GGLSILKWSPTGDYFFAAK------ 273 (350)
Q Consensus 207 ~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~-~~~~------~~v~~~~~sp~g~~l~~~~------ 273 (350)
..+|. ..|++++|+|+|++|++++.| |+|++||+.++..... ..|. ..+..+.|+|++..++++.
T Consensus 292 ~~~h~-~~v~~~~~spdg~~l~s~~~D-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 369 (435)
T 4e54_B 292 SLPHR-HPVNAACFSPDGARLLTTDQK-SEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNF 369 (435)
T ss_dssp CCBCS-SCEEECCBCTTSSEEEEEESS-SCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTS
T ss_pred eeecc-ccccceeECCCCCeeEEEcCC-CEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCe
Confidence 23454 689999999999999999999 6999999998865432 2222 1234567788777776664
Q ss_pred ------cCCeEEEEeCCCCceec-c-ccCCCCeEEE-EEcCCCCEEEEEECCCeEEEEEEe
Q 018806 274 ------FDGTFYLWETNTWTSEP-W-SSTSGFVTGA-TWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 274 ------~d~~v~iwd~~~~~~~~-~-~~~~~~v~~~-~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
.++.|++||..+++... + ..|...|.++ +|+|+|++|++++++ .+..|++
T Consensus 370 ~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~--~i~iW~~ 428 (435)
T 4e54_B 370 KSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGY--HILIWSQ 428 (435)
T ss_dssp CCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSS--EEEECCC
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCC--cEEEEEC
Confidence 24579999999998743 2 3677788887 699999999987654 3444443
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.3e-24 Score=193.83 Aligned_cols=207 Identities=17% Similarity=0.209 Sum_probs=159.0
Q ss_pred CeeEEEEecCCCEEE-EEECCCeEEEEEccCCCCC-ceeEecCCCCCCeeEEEEee-CCCeEEEEecCCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVA-FISGSTQVIVRDYEDSEGK-DACILTSDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la-~~s~d~~i~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
....++++|+...++ +++.||.|+||++...... .......+|.+.|.+++|+| ++..+++++.|+.|++||+...+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 355688888875444 4788999999998532110 11222357999999999999 87888888889999999998554
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC-CeEEEEEeCCCeEEEEeCCCCCceeee---ec
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG-RYLASASYESSSFTIWDVAQGLGTPIR---RG 253 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~~~~~d~g~i~iwd~~~~~~~~~~---~~ 253 (350)
....... ....+.+|. ..|.+++|+|++ ..|++++.| |+|++||+++++..... .|
T Consensus 116 ~~~~~~~------------------~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~ 175 (402)
T 2aq5_A 116 LVLPLRE------------------PVITLEGHT-KRVGIVAWHPTAQNVLLSAGCD-NVILVWDVGTGAAVLTLGPDVH 175 (402)
T ss_dssp CSSCBCS------------------CSEEEECCS-SCEEEEEECSSBTTEEEEEETT-SCEEEEETTTTEEEEEECTTTC
T ss_pred CccccCC------------------ceEEecCCC-CeEEEEEECcCCCCEEEEEcCC-CEEEEEECCCCCccEEEecCCC
Confidence 3221111 133466775 799999999998 688999988 79999999998776544 47
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-c-ccCCCC-eEEEEEcCCCCEEEEEE--CCCeEEEEEEeCC
Q 018806 254 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-W-SSTSGF-VTGATWDPEGRMILLAF--AGSLTLGSIHFAS 327 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~-~~~~~~-v~~~~~s~~g~~l~~~~--~~~~~~~~~~~~~ 327 (350)
...+.+++|+|++++|++++.|+.|++||+++++... + ..|.+. +..++|+|+|++|+++. ..+..+..|++..
T Consensus 176 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 8899999999999999999999999999999988743 4 466655 89999999999998874 3445666666654
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=9.1e-25 Score=190.09 Aligned_cols=216 Identities=8% Similarity=0.019 Sum_probs=159.4
Q ss_pred ccCeeEEEEecCCC-EEEEEECCCeEEEEEc-cCCCCCceeEecCC--CCCCeeEEEEeeCCCeEEEEecCCcEEEEecC
Q 018806 99 EVDLQGVSWHQHKH-IVAFISGSTQVIVRDY-EDSEGKDACILTSD--SQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 99 ~~~V~~v~~sp~g~-~la~~s~d~~i~iw~~-~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~ 174 (350)
...|.+++|+|+++ +|++++.||.|++|++ .. +. ...+ .+ |...|.+++|+| ++.+++++.|+.|++||+.
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--~~-~~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS--PS-FQAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS--SS-EEEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC--Cc-eEec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc
Confidence 44699999999999 9999999999999998 64 22 2333 46 999999999999 8999999999999999987
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC-CCce---ee
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ-GLGT---PI 250 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~-~~~~---~~ 250 (350)
........... .....+. | ...+.+++|+|++ +++++.+ |.|++||+++ +... ..
T Consensus 131 ~~~~~~~~~~~----------------~~~~~~~-~-~~~v~~~~~~~~~--l~~~~~d-~~i~i~d~~~~~~~~~~~~~ 189 (342)
T 1yfq_A 131 NYGDGVIAVKN----------------LNSNNTK-V-KNKIFTMDTNSSR--LIVGMNN-SQVQWFRLPLCEDDNGTIEE 189 (342)
T ss_dssp HHTTBCEEEEE----------------SCSSSSS-S-CCCEEEEEECSSE--EEEEEST-TEEEEEESSCCTTCCCEEEE
T ss_pred ccccccccccC----------------CeeeEEe-e-CCceEEEEecCCc--EEEEeCC-CeEEEEECCccccccceeee
Confidence 31000000000 0011122 3 3689999999987 8888888 6999999998 5432 23
Q ss_pred eecCCCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCC------ce-eccccCCC---------CeEEEEEcCCCCEEEEE
Q 018806 251 RRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTW------TS-EPWSSTSG---------FVTGATWDPEGRMILLA 313 (350)
Q Consensus 251 ~~~~~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~------~~-~~~~~~~~---------~v~~~~~s~~g~~l~~~ 313 (350)
..+...+.+++|+| +++++++++.||.|++|+++.. +. ..+..|.. .|.+++|+|++++|+++
T Consensus 190 ~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 34678899999999 9999999999999999999876 33 33445543 89999999999999988
Q ss_pred ECCCeEEEEEEeCCCC--CCCcee-eccccc
Q 018806 314 FAGSLTLGSIHFASKP--PSLDAH-LLPVDL 341 (350)
Q Consensus 314 ~~~~~~~~~~~~~~~~--~~~~~~-~~~v~~ 341 (350)
+.+ ..+..|++.... ..+.+| ..+|..
T Consensus 270 ~~d-g~i~vwd~~~~~~~~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 270 GSD-GIISCWNLQTRKKIKNFAKFNEDSVVK 299 (342)
T ss_dssp ETT-SCEEEEETTTTEEEEECCCCSSSEEEE
T ss_pred cCC-ceEEEEcCccHhHhhhhhcccCCCceE
Confidence 733 245555554332 245555 655543
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=3.8e-24 Score=194.28 Aligned_cols=236 Identities=13% Similarity=0.171 Sum_probs=174.7
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEee--CCCeEEEEecCCcEEEEecCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
...|++++|+|++ +|++|+.||+|++||+.. ++....+ .+|...|.+++|++ ++..+++++.|+.|++||+...
T Consensus 162 ~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--~~~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 162 DGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--GCCTHVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp SSCEEEEEECSTT-EEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred CcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC--CcEEEEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 4479999999988 899999999999999954 5555554 57999999999995 6567888888999999999855
Q ss_pred CCCcee----------------------ecccccccc--------eecCCCCCceEEe--------eeccCCCCCceeeE
Q 018806 177 GNAASV----------------------RSGAASFLG--------ALSRGPGTRWTLV--------DFLRSQNGEQITAL 218 (350)
Q Consensus 177 ~~~~~~----------------------~~~~~~~~~--------~~~~~~~~~~~~~--------~~~~~~~~~~v~~~ 218 (350)
...... ..+....+. -++.+.++.+.++ ..+.+|. ..|.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~ 316 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYST 316 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEE
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEE
Confidence 432111 111111111 1223334444443 3556675 799999
Q ss_pred EECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCC
Q 018806 219 SWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF 297 (350)
Q Consensus 219 ~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 297 (350)
+|+|+++++++++.| |.|++||+++++... +..|...+.+++|+ +++|++++.||.|++||+++++......+...
T Consensus 317 ~~~~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 393 (464)
T 3v7d_B 317 IYDHERKRCISASMD-TTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 393 (464)
T ss_dssp EEETTTTEEEEEETT-SCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTC
T ss_pred EEcCCCCEEEEEeCC-CcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCC
Confidence 999999999999999 699999999987665 44678899999997 57999999999999999999887655567778
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEEeCCCCC---CCceeeccccccee
Q 018806 298 VTGATWDPEGRMILLAFAGSLTLGSIHFASKPP---SLDAHLLPVDLPDI 344 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~ 344 (350)
+..++|++++++|++++++ .+..|++..... .+..|..+|....+
T Consensus 394 ~~~~~~~~~~~~l~~~~dg--~i~iwd~~~g~~~~~~~~~~~~~v~~v~~ 441 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGSEN--QFNIYNLRSGKLVHANILKDADQIWSVNF 441 (464)
T ss_dssp CCEEEEEECSSEEEEEETT--EEEEEETTTCCEEESCTTTTCSEEEEEEE
T ss_pred ccEEEEEeCCCEEEEecCC--eEEEEECCCCcEEehhhccCCCcEEEEEe
Confidence 8889999999999988854 455666554332 23455555544433
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=4.8e-24 Score=200.00 Aligned_cols=221 Identities=13% Similarity=0.141 Sum_probs=169.5
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCC----CceeEecCCCCCC-eeEEEEee--CCCeEEEEecCCcEEE
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEG----KDACILTSDSQRD-VKVLEWRP--NGGRSLSVGCKGGICI 170 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~----~~~~~~~~~~~~~-v~~~~~sp--~~~~l~~~~~d~~v~i 170 (350)
+...|.+++|+|+|++||+++ ++.|++|++.. + .....+ .+|... |.+++|+| +++.+++++.|+.|++
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~--~~~~~~~~~~~-~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDD--GDSKVPPVVQF-TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-TTEEEEEECCS--SCCSSCSEEEE-CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred ccCceeEEEECCCCCEEEEec-CCeEEEEECCC--CCCccccceEE-ecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 355799999999999999988 88999999964 4 444444 589999 99999999 9888988888999999
Q ss_pred EecCCCC-------CCceeecccccccceecCCCCCceE--------------------EeeeccCCCCCceeeEEECCC
Q 018806 171 WAPSYPG-------NAASVRSGAASFLGALSRGPGTRWT--------------------LVDFLRSQNGEQITALSWGPD 223 (350)
Q Consensus 171 wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~v~~~~~sp~ 223 (350)
||+..+. ............+..+.+++++... ....+.+|. ..|.+++|+|+
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~v~~~~~~~~ 171 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS-QRINACHLKQS 171 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS-SCEEEEEECSS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCC-ccEEEEEECCC
Confidence 9996331 1111111122333444444443321 233456675 79999999999
Q ss_pred CC-eEEEEEeCCCeEEEEeCCCCCceee-eecCC---CeEEEEEcCC-CCEEEEEecCCeEEEEeCCCCceeccc-----
Q 018806 224 GR-YLASASYESSSFTIWDVAQGLGTPI-RRGFG---GLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEPWS----- 292 (350)
Q Consensus 224 g~-~l~~~~~d~g~i~iwd~~~~~~~~~-~~~~~---~v~~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~~~~~----- 292 (350)
++ .+++++.| |.|++||+.+++.... ..|.. .+.+++|+|+ +++|++++.|+.|++||+++++.....
T Consensus 172 ~~~~l~~~~~d-~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 250 (615)
T 1pgu_A 172 RPMRSMTVGDD-GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE 250 (615)
T ss_dssp SSCEEEEEETT-TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB
T ss_pred CCcEEEEEeCC-CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccc
Confidence 98 78888888 7999999998876554 44667 8999999999 999999999999999999999875443
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 293 STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 293 ~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
.|...|.+++|+ ++++|++++.+ ..+..|++.
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~~~~d-~~i~~wd~~ 282 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFATVGAD-ATIRVWDVT 282 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEEEETT-SEEEEEETT
T ss_pred ccCCceEEEEEc-CCCEEEEEcCC-CcEEEEECC
Confidence 889999999999 99999988743 245555554
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.5e-25 Score=194.17 Aligned_cols=194 Identities=8% Similarity=0.055 Sum_probs=148.6
Q ss_pred EecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeeccc
Q 018806 107 WHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGA 186 (350)
Q Consensus 107 ~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 186 (350)
+.+++++|++|+.||.|++||+.. ++....+. ...|.++.|+|+ +++++.|++|++|+.........+...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~--~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~- 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKD--SKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN- 114 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESS--SSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC-
T ss_pred hcCCCCEEEEECCCCcEEEEECCC--CcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc-
Confidence 345788999999999999999964 55555543 456888889988 888888999999988621100000000
Q ss_pred ccccceecCCCCCceEEeeecc-CCCCCceeeEEECC--CCCeEEEEEeCCCeEEEEeCCCCCceeee--ecCCCeEEEE
Q 018806 187 ASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGP--DGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGLSILK 261 (350)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp--~g~~l~~~~~d~g~i~iwd~~~~~~~~~~--~~~~~v~~~~ 261 (350)
.+...+. +|. ..|.+++|+| +++++++++.| |+|++||+++++..... .+...+.+++
T Consensus 115 ---------------~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~d-g~i~~wd~~~~~~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 115 ---------------KVLREIEVDSA-NEIIYMYGHNEVNTEYFIWADNR-GTIGFQSYEDDSQYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp ---------------CEEEEEECCCS-SCEEEEECCC---CCEEEEEETT-CCEEEEESSSSCEEEEECCCSSCCCCEEE
T ss_pred ---------------ceeEEeecCCC-CCEEEEEcCCCCCCCEEEEEeCC-CcEEEEECCCCcEEEEEecCCCCceEEEE
Confidence 0112222 343 6899999999 99999999999 69999999998875544 3445799999
Q ss_pred EcCCCCEEEEEecCCeEEEEeCCCCcee--cccc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 262 WSPTGDYFFAAKFDGTFYLWETNTWTSE--PWSS-TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 262 ~sp~g~~l~~~~~d~~v~iwd~~~~~~~--~~~~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
|+|+|++|++|+.|+.|++||+++++.. .+.. |...|++++|+|+|++|++++++ .+..|++...
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~--~v~iwd~~~~ 245 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ--TVVCFDLRKD 245 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS--BEEEEETTSS
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC--eEEEEEcCCC
Confidence 9999999999999999999999998875 5666 89999999999999999999865 4555555443
No 100
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.2e-23 Score=188.22 Aligned_cols=216 Identities=14% Similarity=0.141 Sum_probs=168.0
Q ss_pred cCeeEEEEecCCCEEEEEECCC---eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-C--CcEEEEec
Q 018806 100 VDLQGVSWHQHKHIVAFISGST---QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-K--GGICIWAP 173 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~---~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d--~~v~iwd~ 173 (350)
..|.+++|||||++||+++.++ .|++||+.. ++.. .+ ..|...+.+++|+|||+.+++++. + ..|++||+
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t--g~~~-~l-~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN--GAVR-QV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--CCEE-EE-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC--CcEE-Ee-ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEEC
Confidence 4799999999999999999875 999999964 4433 33 357788999999999988885554 4 45899998
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC--eEEEEeCCCCCceeee
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS--SFTIWDVAQGLGTPIR 251 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g--~i~iwd~~~~~~~~~~ 251 (350)
..... ..+..+. ..+.+++|+|||++|++++.++| .|++||+.+++...+.
T Consensus 255 ~~~~~--------------------------~~l~~~~-~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 255 ASGQI--------------------------RQVTDGR-SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp TTCCE--------------------------EECCCCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred CCCCE--------------------------EeCcCCC-CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe
Confidence 74321 2234443 68899999999999998886534 6888899988766666
Q ss_pred ecCCCeEEEEEcCCCCEEEEEecC---CeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECC--CeEEEEEEeC
Q 018806 252 RGFGGLSILKWSPTGDYFFAAKFD---GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAG--SLTLGSIHFA 326 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~--~~~~~~~~~~ 326 (350)
.+...+.+++|+|+|++|++++.+ ..|++||+.+++...+..+. .+.+++|+|||++|++++.. ...++.|++.
T Consensus 308 ~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 308 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 666788899999999999888764 58999999999887666654 89999999999999988733 3478888876
Q ss_pred CCCC-CCceeecccccceeecc
Q 018806 327 SKPP-SLDAHLLPVDLPDIVSL 347 (350)
Q Consensus 327 ~~~~-~~~~~~~~v~~~~~~~~ 347 (350)
.... .+..|...|..+.+.+.
T Consensus 387 g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 387 GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp SCCEEECCCSSSEEEEEEECCC
T ss_pred CCcEEEeeCCCCCCcCCccccc
Confidence 5433 66777777877777653
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=5.5e-24 Score=206.25 Aligned_cols=218 Identities=16% Similarity=0.237 Sum_probs=169.4
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+|++++|++++.||.|++|++.. ++....+ .+|...|.+++|+|+++.+++++.|+.|++||+.....
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC--CcEEEEE-ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce
Confidence 34699999999999999999999999999954 5555555 47999999999999998999999999999999985533
Q ss_pred CceeecccccccceecC-----------CCCCceEEeee--------ccCCCCCceeeEEECC--CCCeEEEEEeCCCeE
Q 018806 179 AASVRSGAASFLGALSR-----------GPGTRWTLVDF--------LRSQNGEQITALSWGP--DGRYLASASYESSSF 237 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~--------~~~~~~~~v~~~~~sp--~g~~l~~~~~d~g~i 237 (350)
...........+..+.+ +.++.+.+++. +..++...+..++|+| ++++|++++.+ |.|
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-g~i 210 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-LTI 210 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-SEE
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-CEE
Confidence 32222222222222222 33444555542 2333336899999999 99999999999 799
Q ss_pred EEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCC--EEEEE
Q 018806 238 TIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGR--MILLA 313 (350)
Q Consensus 238 ~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~--~l~~~ 313 (350)
++||+.+++... +..|...+.+++|+|++++|++++.||.|++||+.+++. ..+..+...+.+++|+|+|+ +++++
T Consensus 211 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 290 (814)
T 3mkq_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290 (814)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEE
Confidence 999999887655 445788999999999999999999999999999999887 44567788999999999998 46655
Q ss_pred ECCCeEE
Q 018806 314 FAGSLTL 320 (350)
Q Consensus 314 ~~~~~~~ 320 (350)
.++...+
T Consensus 291 ~~~~~~~ 297 (814)
T 3mkq_A 291 FDNGFTV 297 (814)
T ss_dssp ETTEEEE
T ss_pred eCCCEEE
Confidence 5554433
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-24 Score=208.59 Aligned_cols=200 Identities=18% Similarity=0.314 Sum_probs=159.4
Q ss_pred ccCeeEEEEecC--CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecC
Q 018806 99 EVDLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 99 ~~~V~~v~~sp~--g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~ 174 (350)
...|++++|+|+ +++|++|+.||.|++||+........... .+|...|.+++|+|+ +..+++++.|+.|++||+.
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~ 131 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 131 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEee
Confidence 346999999988 99999999999999999975221133333 579999999999999 8899999999999999998
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-------------CCCeEEEEEeCCCeEEEEe
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-------------DGRYLASASYESSSFTIWD 241 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-------------~g~~l~~~~~d~g~i~iwd 241 (350)
....... ..+.+|. ..|.+++|+| +++.+++++.| |+|++||
T Consensus 132 ~~~~~~~-----------------------~~~~~~~-~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-g~I~iwd 186 (753)
T 3jro_A 132 ENGTTSP-----------------------IIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-NLVKIWK 186 (753)
T ss_dssp SSSCCCC-----------------------EEEECCS-SCEEEEEECCCC---------CGGGCCEEEEETT-SCEEEEE
T ss_pred cCCCcce-----------------------eEeecCC-CceEEEEecCcccccccccccCCCCCEEEEEECC-CeEEEEe
Confidence 5432211 1234554 7999999999 58999999999 7999999
Q ss_pred CCCCCce-----eeeecCCCeEEEEEcCC---CCEEEEEecCCeEEEEeCCCCce------eccccCCCCeEEEEEcCCC
Q 018806 242 VAQGLGT-----PIRRGFGGLSILKWSPT---GDYFFAAKFDGTFYLWETNTWTS------EPWSSTSGFVTGATWDPEG 307 (350)
Q Consensus 242 ~~~~~~~-----~~~~~~~~v~~~~~sp~---g~~l~~~~~d~~v~iwd~~~~~~------~~~~~~~~~v~~~~~s~~g 307 (350)
++++... .+..|...|.+++|+|+ +++|++++.||.|++||+++++. .....|...|++++|+|+|
T Consensus 187 ~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg 266 (753)
T 3jro_A 187 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG 266 (753)
T ss_dssp EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT
T ss_pred ccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC
Confidence 9887432 24457889999999999 89999999999999999998742 2344678899999999999
Q ss_pred CEEEEEE-CCCeEEEEEE
Q 018806 308 RMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~~~ 324 (350)
++|++++ ++.+.+|.+.
T Consensus 267 ~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 267 NVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCEEEECSSSCEECCBCC
T ss_pred CEEEEEcCCCEEEEEecC
Confidence 9999886 4444444443
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=4.5e-24 Score=215.94 Aligned_cols=218 Identities=14% Similarity=0.179 Sum_probs=161.8
Q ss_pred hhhhhhhhhccccccCCCCcCCCC------------------------ccCeeEEEEecCCCEEEEEECCCeEEEEEccC
Q 018806 75 STLHGIISHSIKPLLHPDHVHLLP------------------------EVDLQGVSWHQHKHIVAFISGSTQVIVRDYED 130 (350)
Q Consensus 75 ~~~~gh~~~~~~~~~~p~~~~~~~------------------------~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~ 130 (350)
..+.||.+.+....+.|+...++. ...|.+++|+|+|++||+++.|+.|+|||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 356678887777777776443332 22699999999999999999999999999964
Q ss_pred CCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeecc
Q 018806 131 SEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR 208 (350)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (350)
++....+ .+|...|.+++|+|+ +..+++++.|+.|++||+..+... ..+.
T Consensus 689 --~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-------------------------~~~~ 740 (1249)
T 3sfz_A 689 --GKLVHTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR-------------------------NTMF 740 (1249)
T ss_dssp --CCEEEEE-ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE-------------------------EEEC
T ss_pred --CceEEEE-cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh-------------------------heec
Confidence 6655555 479999999999995 335666777899999999854322 2233
Q ss_pred CCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC--------------------------------------------
Q 018806 209 SQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ-------------------------------------------- 244 (350)
Q Consensus 209 ~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~-------------------------------------------- 244 (350)
+|. ..|.+++|+|++++|++++.| |+|++||+.+
T Consensus 741 ~h~-~~v~~~~~sp~~~~l~s~s~d-g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 741 GHT-NSVNHCRFSPDDELLASCSAD-GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp CCS-SCEEEEEECSSTTEEEEEESS-SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred CCC-CCEEEEEEecCCCEEEEEECC-CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 443 455666666666666655555 4666665543
Q ss_pred ----------CCceeee--ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEE
Q 018806 245 ----------GLGTPIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMIL 311 (350)
Q Consensus 245 ----------~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~ 311 (350)
+...... .|...+.+++|+|+++++++++.|+.|++||+.+++. ..+..|...|.+++|+|+|++|+
T Consensus 819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE
Confidence 3322211 4567899999999999999999999999999999877 45678999999999999999999
Q ss_pred EEE-CCCeEEEE
Q 018806 312 LAF-AGSLTLGS 322 (350)
Q Consensus 312 ~~~-~~~~~~~~ 322 (350)
+++ ++.+.+|.
T Consensus 899 s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 899 TASDDQTIRVWE 910 (1249)
T ss_dssp EEETTSCEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 887 44455554
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=5.9e-24 Score=186.37 Aligned_cols=216 Identities=11% Similarity=0.115 Sum_probs=148.2
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEE-ecCCcEEEEecCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSV-GCKGGICIWAPSYPG 177 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~v~iwd~~~~~ 177 (350)
...|++++|+|||++||+|+.++ ++||+.+. ....... +...+..+++.++++.++.+ +.|++|++||...+.
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP--VAHIMSQ---EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSE-EEEEEETT--EEEEEEE---ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCEEEEEcCCE-EEEEecCC--cceeeee---ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 45699999999999999987775 78999853 3333322 22258888999887777554 446999999998655
Q ss_pred CCceeecccccccceecCC-------CCCceEEeeeccC-CC----CCceeeEEECCCCCeEEEE--EeCCCeEEEEeCC
Q 018806 178 NAASVRSGAASFLGALSRG-------PGTRWTLVDFLRS-QN----GEQITALSWGPDGRYLASA--SYESSSFTIWDVA 243 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~----~~~v~~~~~sp~g~~l~~~--~~d~g~i~iwd~~ 243 (350)
....+... ..+..+.+. .++.+.+++.-.. .. ......+++++ ..++++ +.+ |.|++||++
T Consensus 93 ~~~~~~~~--~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~-g~v~iwd~~ 167 (355)
T 3vu4_A 93 DVSRIKVD--APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNL-GQIHITKLQ 167 (355)
T ss_dssp EEEEEECS--SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCT-TCEEEEECC
T ss_pred EEEEEECC--CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcC-cEEEEEECC
Confidence 44333211 122222222 2334444442222 00 00223345666 566664 556 799999999
Q ss_pred CCC-----------------ceeeeecCCCeEEEEEcCCCCEEEEEecCCe-EEEEeCCCCceec-cc-c-CCCCeEEEE
Q 018806 244 QGL-----------------GTPIRRGFGGLSILKWSPTGDYFFAAKFDGT-FYLWETNTWTSEP-WS-S-TSGFVTGAT 302 (350)
Q Consensus 244 ~~~-----------------~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~-v~iwd~~~~~~~~-~~-~-~~~~v~~~~ 302 (350)
++. ...+..|...|.+++|+|+|++|++++.|++ |++||+++++... +. + |...|.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMK 247 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEE
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEE
Confidence 865 4456678899999999999999999999998 9999999998744 44 3 899999999
Q ss_pred EcCCCCEEEEEECCCeEEEEEEeC
Q 018806 303 WDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 303 ~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
|+|+|++|++++.+ ..+..|++.
T Consensus 248 ~s~~~~~l~s~s~d-~~v~iw~~~ 270 (355)
T 3vu4_A 248 WSTDGSKLAVVSDK-WTLHVFEIF 270 (355)
T ss_dssp ECTTSCEEEEEETT-CEEEEEESS
T ss_pred ECCCCCEEEEEECC-CEEEEEEcc
Confidence 99999999988743 245555554
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6e-24 Score=192.33 Aligned_cols=198 Identities=11% Similarity=0.029 Sum_probs=152.4
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCC---ceeEec------------------------------------
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGK---DACILT------------------------------------ 140 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~---~~~~~~------------------------------------ 140 (350)
.++.+++|+|+|++|+++ .++.|++||+.+ ++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQS--PNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEET--TTEEEEEEEEECCC---------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCC--CCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 358999999999966654 678999999865 43 222221
Q ss_pred -----------------CCCCCCeeEEEEeeCCCeE-EEEecCCcEEEEecC--CCCCCceeecccccccceecCCCCCc
Q 018806 141 -----------------SDSQRDVKVLEWRPNGGRS-LSVGCKGGICIWAPS--YPGNAASVRSGAASFLGALSRGPGTR 200 (350)
Q Consensus 141 -----------------~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (350)
.+|.+.|.+++|+|+++.| ++++.|+.|++||+. .......+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~---------------- 145 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR---------------- 145 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE----------------
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec----------------
Confidence 0234479999999998886 555568999999998 3332222110
Q ss_pred eEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce-----eeeecCCCeEEEEEcCC---CCEEEEE
Q 018806 201 WTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT-----PIRRGFGGLSILKWSPT---GDYFFAA 272 (350)
Q Consensus 201 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~-----~~~~~~~~v~~~~~sp~---g~~l~~~ 272 (350)
..+ ...|.+++|+|++++|++++.+ |.|++|++.++... .+..|...|.+++|+|+ +++|+++
T Consensus 146 -------~~~-~~~v~~~~~sp~~~~l~~~~~~-g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 216 (450)
T 2vdu_B 146 -------FCF-SKRPNAISIAEDDTTVIIADKF-GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS 216 (450)
T ss_dssp -------EEC-SSCEEEEEECTTSSEEEEEETT-SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEE
T ss_pred -------ccC-CCCceEEEEcCCCCEEEEEeCC-CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEE
Confidence 123 3689999999999999999998 79999999887654 45568899999999999 9999999
Q ss_pred ecCCeEEEEeCCCCcee-c-cccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 273 KFDGTFYLWETNTWTSE-P-WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 273 ~~d~~v~iwd~~~~~~~-~-~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+.|+.|++||+++++.. . +.+|...|.+++|+ +|++|++++.+ ..+..|++..
T Consensus 217 ~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-~~v~vwd~~~ 271 (450)
T 2vdu_B 217 DRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-DKIFAWDWKT 271 (450)
T ss_dssp ETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-SEEEEEETTT
T ss_pred cCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-CeEEEEECCC
Confidence 99999999999988864 3 45799999999999 99999988733 3555666544
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=3.3e-23 Score=181.64 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=154.5
Q ss_pred CeeEEEEecCCCEEE-EEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC-CC
Q 018806 101 DLQGVSWHQHKHIVA-FISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP-GN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la-~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~-~~ 178 (350)
.+..+++.++++.++ +++.|++|+|||... ++....+ .+...|.+++|+++ .++++.++.|++||+... ..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~--~~~~~~~--~~~~~v~~v~~~~~---~~~~~~~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK--KQDVSRI--KVDAPVKDLFLSRE---FIVVSYGDVISVFKFGNPWKR 132 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTT--TEEEEEE--ECSSCEEEEEECSS---EEEEEETTEEEEEESSTTCCB
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCC--CcEEEEE--ECCCceEEEEEcCC---EEEEEEcCEEEEEECCCCcee
Confidence 467788999988885 566789999999854 5555555 36678999999876 234456889999999865 33
Q ss_pred Cceeecc----cccccceec---CCCCCceEE------------------------eeeccCCCCCceeeEEECCCCCeE
Q 018806 179 AASVRSG----AASFLGALS---RGPGTRWTL------------------------VDFLRSQNGEQITALSWGPDGRYL 227 (350)
Q Consensus 179 ~~~~~~~----~~~~~~~~~---~~~~~~~~~------------------------~~~~~~~~~~~v~~~~~sp~g~~l 227 (350)
...+... ...+ ..++ ...++.+.+ ...+.+|. ..|.+++|+|+|++|
T Consensus 133 ~~~~~~~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 133 ITDDIRFGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMV 210 (355)
T ss_dssp SSCCEEEEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEE
T ss_pred eEEeccCCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEE
Confidence 3333220 0000 1111 233344333 34466776 799999999999999
Q ss_pred EEEEeCCCe-EEEEeCCCCCceeeee---cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec---cc--------
Q 018806 228 ASASYESSS-FTIWDVAQGLGTPIRR---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP---WS-------- 292 (350)
Q Consensus 228 ~~~~~d~g~-i~iwd~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~---~~-------- 292 (350)
++++.| |+ |++||+++++...... |...|.+++|+|+|++|++++.|++|++||++.+.... +.
T Consensus 211 ~s~s~d-~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T 3vu4_A 211 ATCSQD-GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF 289 (355)
T ss_dssp EEEETT-CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred EEEeCC-CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccc
Confidence 999999 68 9999999998776554 78899999999999999999999999999998764211 10
Q ss_pred -------------cCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeC
Q 018806 293 -------------STSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 293 -------------~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~ 326 (350)
........++|+++|++|++++ ++...+|.+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0112246789999999999887 444555555443
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.5e-25 Score=199.56 Aligned_cols=200 Identities=7% Similarity=0.092 Sum_probs=150.0
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCC-CCCceeEe--------c-CC--CCCCeeEEE--EeeCCCeEEEEec
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS-EGKDACIL--------T-SD--SQRDVKVLE--WRPNGGRSLSVGC 164 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~-~~~~~~~~--------~-~~--~~~~v~~~~--~sp~~~~l~~~~~ 164 (350)
...|++++|+|++++|++++.|+.|++||++.. .++..... . .. +...+.++. +++++..+++++.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 346999999999999999999999999999521 12221111 0 01 556677777 5577788888888
Q ss_pred CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccC--CCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 165 KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS--QNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
|+.|++||+..... ...+.+ |. ..|++++|+|++++|++++.| |+|++||+
T Consensus 191 d~~i~iwd~~~~~~-------------------------~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~d-g~i~iwd~ 243 (437)
T 3gre_A 191 LSRVIIFDIRTLER-------------------------LQIIENSPRH-GAVSSICIDEECCVLILGTTR-GIIDIWDI 243 (437)
T ss_dssp TSEEEEEETTTCCE-------------------------EEEEECCGGG-CCEEEEEECTTSCEEEEEETT-SCEEEEET
T ss_pred CCeEEEEeCCCCee-------------------------eEEEccCCCC-CceEEEEECCCCCEEEEEcCC-CeEEEEEc
Confidence 99999999984332 333444 44 699999999999999999999 79999999
Q ss_pred CCCCceeee--ecCCCeEEEEEc----CCCCEEEEEecCCeEEEEeCCCCceec-cc-----------------------
Q 018806 243 AQGLGTPIR--RGFGGLSILKWS----PTGDYFFAAKFDGTFYLWETNTWTSEP-WS----------------------- 292 (350)
Q Consensus 243 ~~~~~~~~~--~~~~~v~~~~~s----p~g~~l~~~~~d~~v~iwd~~~~~~~~-~~----------------------- 292 (350)
++++..... .+...|.+++|+ |++++|++++.|+.|++||+++++... +.
T Consensus 244 ~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (437)
T 3gre_A 244 RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNF 323 (437)
T ss_dssp TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCC
T ss_pred CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccccee
Confidence 998776543 566789999665 568899999999999999999887522 11
Q ss_pred -c--CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 293 -S--TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 293 -~--~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+ |...|++++|+ ++++|++++. +..+..|++..
T Consensus 324 ~~~~~~~~v~~l~~~-~~~~l~s~~~-d~~i~~wd~~~ 359 (437)
T 3gre_A 324 CGIRSLNALSTISVS-NDKILLTDEA-TSSIVMFSLNE 359 (437)
T ss_dssp CCCCSGGGGCCEEEE-TTEEEEEEGG-GTEEEEEETTC
T ss_pred cccccCCceEEEEEC-CceEEEecCC-CCeEEEEECCC
Confidence 1 55678999999 7788887762 23455555543
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=7.2e-24 Score=192.46 Aligned_cols=207 Identities=15% Similarity=0.238 Sum_probs=159.9
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
+.++.+ ++++|++|+.||.|++||+.. ++....+ .+|.+.|.+++|+|++ .+++++.|++|++||+..+.
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~--~~~~~~~-~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~---- 194 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSIN--KKFLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC---- 194 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTT--TEEEEEE-CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE----
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCC--CcEEEEE-eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc----
Confidence 466665 567999999999999999954 5555555 4899999999999985 88888889999999998432
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEEC--CCCCeEEEEEeCCCeEEEEeCCCCCce-----------
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG--PDGRYLASASYESSSFTIWDVAQGLGT----------- 248 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~g~~l~~~~~d~g~i~iwd~~~~~~~----------- 248 (350)
....+.+|. ..|.+++|+ ++++++++++.| |+|++||++++...
T Consensus 195 ---------------------~~~~~~~h~-~~v~~l~~~~~~~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 195 ---------------------CTHVFEGHN-STVRCLDIVEYKNIKYIVTGSRD-NTLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp ---------------------EEEEECCCS-SCEEEEEEEESSSCEEEEEEETT-SCEEEEECCCCCCC------CCSSE
T ss_pred ---------------------EEEEECCCC-CccEEEEEecCCCCCEEEEEcCC-CcEEEeeCCCCcccccccccCCcce
Confidence 234466675 799999998 578899999999 69999999877532
Q ss_pred -------------eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 249 -------------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 249 -------------~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
....|...+.++ +++++++++++.|+.|++||+++++. ..+..|...|.+++|+|++++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred EeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe
Confidence 233455566655 67899999999999999999999887 45667899999999999999999887
Q ss_pred CCCeEEEEEEeCCC--CCCCceeeccccccee
Q 018806 315 AGSLTLGSIHFASK--PPSLDAHLLPVDLPDI 344 (350)
Q Consensus 315 ~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~ 344 (350)
.+. .+..|++... ...+.+|..+|....+
T Consensus 330 ~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 330 MDT-TIRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp TTS-CEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCC-cEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 332 3445554432 2255677777665443
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.92 E-value=4.3e-24 Score=187.90 Aligned_cols=162 Identities=12% Similarity=0.108 Sum_probs=127.9
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCcee-EecCCCCCCeeEEEEeeCCCeEEEEecCC----cEEEEec
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDAC-ILTSDSQRDVKVLEWRPNGGRSLSVGCKG----GICIWAP 173 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~v~iwd~ 173 (350)
..+|++++|+|||++|++++.++ +.+|+... +.... .....|...|.+++|+|+++.+++++.++ .+++|++
T Consensus 176 ~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~--~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 176 RGEVKDLHFSTDGKVVAYITGSS-LEVISTVT--GSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp SSCCCEEEECTTSSEEEEECSSC-EEEEETTT--CCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred CCceEEEEEccCCceEEecccee-EEEEEecc--CcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 34799999999999999988665 56666543 44333 33346888999999999988888888775 5778887
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee--e
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI--R 251 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~--~ 251 (350)
...... ......+.+|. ..|++++|+|+|++|++++.| |+|+|||+++++.... .
T Consensus 253 ~~~~~~---------------------~~~~~~~~~~~-~~V~~~~~Spdg~~lasgs~D-~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 253 KSGNTS---------------------VLRSKQVTNRF-KGITSMDVDMKGELAVLASND-NSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp ETTEEE---------------------EEEEEEEESSC-SCEEEEEECTTSCEEEEEETT-SCEEEEETTTTEEEEEETT
T ss_pred ccceec---------------------ceeeeeecCCC-CCeEeEEECCCCCceEEEcCC-CEEEEEECCCCcEEEEecC
Confidence 632110 01123456665 689999999999999999999 6999999999987653 3
Q ss_pred ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q 018806 252 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW 286 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~ 286 (350)
.|...|++++|+|||++||+++.|++|+|||+...
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 68899999999999999999999999999999654
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=1.3e-23 Score=197.02 Aligned_cols=237 Identities=16% Similarity=0.223 Sum_probs=169.8
Q ss_pred ccC-eeEEEEec--CCCEEEEEECCCeEEEEEccCC------CCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC----
Q 018806 99 EVD-LQGVSWHQ--HKHIVAFISGSTQVIVRDYEDS------EGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK---- 165 (350)
Q Consensus 99 ~~~-V~~v~~sp--~g~~la~~s~d~~i~iw~~~~~------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---- 165 (350)
... |++++|+| ++++||+++.||.|++|++... .......+ ..|...|.+++|+|+++.+++++.+
T Consensus 63 ~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 141 (615)
T 1pgu_A 63 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF-QVLAGPISDISWDFEGRRLCVVGEGRDNF 141 (615)
T ss_dssp TTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE-ECCSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred CCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchh-hcccccEEEEEEeCCCCEEEEeccCCCCc
Confidence 446 99999999 9999999999999999999532 12333333 4688999999999999888888876
Q ss_pred CcEEEEecCCCCCCceeecccccccceecCCC-----------CCceEEe--------eeccCCCCC---ceeeEEECCC
Q 018806 166 GGICIWAPSYPGNAASVRSGAASFLGALSRGP-----------GTRWTLV--------DFLRSQNGE---QITALSWGPD 223 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--------~~~~~~~~~---~v~~~~~sp~ 223 (350)
+.|++||.. .....+ ......+..+.+.+ ++.+.++ ..+.+|. . .|.+++|+|+
T Consensus 142 ~~v~~~d~~--~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 142 GVFISWDSG--NSLGEV-SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH-KQGSFVRDVEFSPD 217 (615)
T ss_dssp EEEEETTTC--CEEEEC-CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS-CTTCCEEEEEECST
T ss_pred cEEEEEECC--Ccceee-ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC-CCCceEEEEEECCC
Confidence 688888843 221111 12222222233333 3333333 3556665 5 8999999999
Q ss_pred -CCeEEEEEeCCCeEEEEeCCCCCceeee-----ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-cccC--
Q 018806 224 -GRYLASASYESSSFTIWDVAQGLGTPIR-----RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WSST-- 294 (350)
Q Consensus 224 -g~~l~~~~~d~g~i~iwd~~~~~~~~~~-----~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~~~~-- 294 (350)
+++|++++.+ |.|++||+++++..... .|...+.+++|+ ++++|++++.|+.|++||+++++... +..+
T Consensus 218 ~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 295 (615)
T 1pgu_A 218 SGEFVITVGSD-RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 295 (615)
T ss_dssp TCCEEEEEETT-CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred CCCEEEEEeCC-CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC
Confidence 9999999999 69999999998877655 788999999999 99999999999999999999888743 3333
Q ss_pred --CCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeCCCCCCCceeecccccce
Q 018806 295 --SGFVTGATWDPEGRMILLAF-AGSLTLGSIHFASKPPSLDAHLLPVDLPD 343 (350)
Q Consensus 295 --~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 343 (350)
...+.++.|+ +++++++++ ++.+.+|.+........+.+|..+|....
T Consensus 296 ~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~ 346 (615)
T 1pgu_A 296 QLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALT 346 (615)
T ss_dssp CGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred cccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEE
Confidence 3678888886 888998887 44444443322111224445655554433
No 111
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=4.2e-23 Score=179.34 Aligned_cols=188 Identities=18% Similarity=0.279 Sum_probs=141.2
Q ss_pred ccCeeEEEEec--CCCEEEEEECCCeEEEEEccCCCCC------ceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcE
Q 018806 99 EVDLQGVSWHQ--HKHIVAFISGSTQVIVRDYEDSEGK------DACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGI 168 (350)
Q Consensus 99 ~~~V~~v~~sp--~g~~la~~s~d~~i~iw~~~~~~~~------~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v 168 (350)
...|++++|+| ++++|++++.|+.|++||+...... ........|...|.+++|+|+ +..+++++.|+.|
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE
Confidence 34699999999 6999999999999999999653211 122333579999999999999 8899999999999
Q ss_pred EEEecCCCCCCceeec------------ccccccceecCCC-----------------------CCceEEeeeccCCCCC
Q 018806 169 CIWAPSYPGNAASVRS------------GAASFLGALSRGP-----------------------GTRWTLVDFLRSQNGE 213 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~------------~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 213 (350)
++||+........+.. ........+.+.+ .+.......+.+|. .
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~ 215 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK-S 215 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC-S
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC-c
Confidence 9999986654433321 1111111122222 12223355667775 7
Q ss_pred ceeeEEECCCC----CeEEEEEeCCCeEEEEeCCCCC-------------------------------------------
Q 018806 214 QITALSWGPDG----RYLASASYESSSFTIWDVAQGL------------------------------------------- 246 (350)
Q Consensus 214 ~v~~~~~sp~g----~~l~~~~~d~g~i~iwd~~~~~------------------------------------------- 246 (350)
.|.+++|+|++ ++|++++.| |.|++||++.+.
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKD-GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL 294 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETT-SCEEEEEEEECC---------------------------------------CCSE
T ss_pred ceeEEEECCCCCCcceEEEEEcCC-CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccc
Confidence 99999999998 789999999 799999998641
Q ss_pred ---ce-eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 247 ---GT-PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 247 ---~~-~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
.. .+..|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 295 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 295 QVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred cccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 11 2334778999999999999999999999999999998765
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-23 Score=203.26 Aligned_cols=195 Identities=9% Similarity=0.071 Sum_probs=145.9
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|++++|+| |++|++++.|++|+|||+.. ++....+. |...|++++|+|+++.+++++.||.|++||+.....
T Consensus 58 ~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~--~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 58 RSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS--QKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CCCEEEEEEET-TTEEEEEETTCEEEEEETTT--CSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEEcC-CCEEEEEECcCeEEEEECCC--CcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 45799999999 88999999999999999964 55555553 667899999999999999999999999999984322
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-CCeEEEEEeCCCeEEEEeCCCCCceeeee-c---
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRYLASASYESSSFTIWDVAQGLGTPIRR-G--- 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~--- 253 (350)
. .+.... .+.....+.+|. +.|.+++|+|+ +..|++++.| |.| +||+++++...... +
T Consensus 133 ~-~~~i~~-------------~~~~~~~~~~h~-~~V~sl~~sp~~~~~l~~g~~d-g~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 133 S-SFKLDN-------------LQKSSFFPAARL-SPIVSIQWNPRDIGTVLISYEY-VTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp E-EEEECC-------------HHHHHTCSSSCC-CCCCEEEEETTEEEEEEEECSS-CEE-EEETTTTEEEEEECCCBCT
T ss_pred c-cceecc-------------ccccccccccCC-CCeEEEEEccCCCCEEEEEeCC-CcE-EEECCCCceEEEEecccCC
Confidence 1 100000 000001245665 79999999996 4678888888 799 99999887654332 2
Q ss_pred ---------------CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec---cc---c-------------CCCCeE
Q 018806 254 ---------------FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP---WS---S-------------TSGFVT 299 (350)
Q Consensus 254 ---------------~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~---~~---~-------------~~~~v~ 299 (350)
...|.+++|+|+|++|++++.|++|++||+++++... +. . +...|.
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~ 275 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKIS 275 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEE
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCee
Confidence 3679999999999999999999999999999987643 21 1 245799
Q ss_pred EEEEc----CCC-CEEEEEEC
Q 018806 300 GATWD----PEG-RMILLAFA 315 (350)
Q Consensus 300 ~~~~s----~~g-~~l~~~~~ 315 (350)
+++|+ |++ .+|++++.
T Consensus 276 ~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 276 KVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp EEEEEECSSTTEEEEEEEEEC
T ss_pred EEEEEecCCCCCCEEEEeCCC
Confidence 99995 554 45555543
No 113
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=7.8e-23 Score=176.32 Aligned_cols=182 Identities=18% Similarity=0.228 Sum_probs=134.0
Q ss_pred cCeeEEEEec--CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC--CCeEEEEecCCcEEEEecCC
Q 018806 100 VDLQGVSWHQ--HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 100 ~~V~~v~~sp--~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~iwd~~~ 175 (350)
..|++++|++ ++++|++++.|++|++||+..........+ .+|...|.+++|+|+ +..+++++.|++|++||+..
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 3499999986 489999999999999999964322333333 579999999999998 66788888899999999874
Q ss_pred CCCC--ce--------eeccccccc------------------ce-ecCCCCCceEE-----------eeeccCCCCCce
Q 018806 176 PGNA--AS--------VRSGAASFL------------------GA-LSRGPGTRWTL-----------VDFLRSQNGEQI 215 (350)
Q Consensus 176 ~~~~--~~--------~~~~~~~~~------------------~~-~~~~~~~~~~~-----------~~~~~~~~~~~v 215 (350)
.... .. +....+.+. .. ++.+.++.+++ ...+.+|. ..|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~-~~V 215 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS-DWV 215 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS-SCE
T ss_pred CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC-Cce
Confidence 4211 01 111111111 11 22333444333 33456776 689
Q ss_pred eeEEECCCC----CeEEEEEeCCCeEEEEeCCCCC-----ceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCC
Q 018806 216 TALSWGPDG----RYLASASYESSSFTIWDVAQGL-----GTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETN 284 (350)
Q Consensus 216 ~~~~~sp~g----~~l~~~~~d~g~i~iwd~~~~~-----~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~ 284 (350)
.+++|+|++ ++|++++.| |+|++||+.+.. ...+..|...|.+++|+|+|++|++++.|++|++|+..
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D-~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQD-GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETT-CEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEecCCCCCCCceEEEEcCC-CeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999986 789999999 699999998631 12345678899999999999999999999999999975
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=1.4e-23 Score=186.48 Aligned_cols=219 Identities=13% Similarity=0.020 Sum_probs=143.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCc--eeEecCCCCCCeeEEEEee--------CCCeEEEEecCCcEEE
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKD--ACILTSDSQRDVKVLEWRP--------NGGRSLSVGCKGGICI 170 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~--~~~~~~~~~~~v~~~~~sp--------~~~~l~~~~~d~~v~i 170 (350)
.+....+++++.+||+++.|++|+|||....+... ......+|.+.|++++|+| |++.|++++.|++|+|
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 34445566778899999999999999996532111 1122357999999999998 7778888888999999
Q ss_pred EecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCC-eEEEEEeCCCeEEEEeCCCCCcee
Q 018806 171 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-YLASASYESSSFTIWDVAQGLGTP 249 (350)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~~d~g~i~iwd~~~~~~~~ 249 (350)
||+..... ...+.+|+ ..+.+++|+|++. +|++++.| |+|++||+++++...
T Consensus 171 Wd~~~~~~-------------------------~~~~~~~~-~~v~~v~~~p~~~~~l~~~~~d-~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 171 WRLTDEGP-------------------------ILAGYPLS-SPGISVQFRPSNPNQLIVGERN-GNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEEETTEE-------------------------EEEEEECS-SCEEEEEEETTEEEEEEEEETT-SEEEEEETTCCC---
T ss_pred EECCCCce-------------------------eeeecCCC-CCcEEEEECCCCCceEEecCCC-CEEEEEECCCCcccc
Confidence 99974332 22234454 6899999999875 78888888 799999998874321
Q ss_pred --------------------------eeecCCCeEEEEEc-CCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCe---
Q 018806 250 --------------------------IRRGFGGLSILKWS-PTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFV--- 298 (350)
Q Consensus 250 --------------------------~~~~~~~v~~~~~s-p~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v--- 298 (350)
...|...+.++.|+ |+|+.|++++.|+++++||+.+++.. .+..+...+
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 11345667888886 79999999999999999999876642 222222222
Q ss_pred ----------------EEEEEcCCCCEEEEEECCCeEEEEEEeCCCCC--CCceeecccccceeec
Q 018806 299 ----------------TGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLLPVDLPDIVS 346 (350)
Q Consensus 299 ----------------~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~ 346 (350)
..+.+.+.++.++++++.+..+..|+...... .+..|..+|....+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp 369 (393)
T 4gq1_A 304 NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ 369 (393)
T ss_dssp CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT
T ss_pred EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC
Confidence 22333334555666665556777777665433 4457777887666653
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.91 E-value=1.7e-22 Score=181.98 Aligned_cols=229 Identities=12% Similarity=0.170 Sum_probs=168.5
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|.++++ ++++|++|+.||.|++||+.. ++....+ .+|...|.+++| +++.+++++.||.|++||+......
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~--~~~~~~~-~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNT--LECKRIL-TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCEEEEESSS--CCEEEEE-CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CcEEEEEE--CCCEEEEEeCCCeEEEEeCCC--CeEEEEE-cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 45777766 899999999999999999854 5555555 589999999999 6678888888999999999865543
Q ss_pred ceeecccccccce--------ecCCCCCceEEee-----------eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEE
Q 018806 180 ASVRSGAASFLGA--------LSRGPGTRWTLVD-----------FLRSQNGEQITALSWGPDGRYLASASYESSSFTIW 240 (350)
Q Consensus 180 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iw 240 (350)
..+. .....+.. ++.+.++.+.+++ .+.+|. ..|.+++| ++++|++++.| |.|++|
T Consensus 207 ~~~~-~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~s~~~d-g~i~vw 281 (435)
T 1p22_A 207 NTLI-HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-AAVNVVDF--DDKYIVSASGD-RTIKVW 281 (435)
T ss_dssp EEEC-CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS-SCEEEEEE--ETTEEEEEETT-SEEEEE
T ss_pred EEEc-CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC-CcEEEEEe--CCCEEEEEeCC-CeEEEE
Confidence 3332 11222222 2333444444443 445665 68999999 78899999999 799999
Q ss_pred eCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE-CCC
Q 018806 241 DVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF-AGS 317 (350)
Q Consensus 241 d~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~ 317 (350)
|+++++... +..|...+.+++| +++++++++.|+.|++||+++++. ..+..|...|.+++| ++++|++++ ++.
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred ECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 999987765 4457888999998 578999999999999999999887 456689999999999 788999887 555
Q ss_pred eEEEEEEeCCC---------CCCCceeeccccccee
Q 018806 318 LTLGSIHFASK---------PPSLDAHLLPVDLPDI 344 (350)
Q Consensus 318 ~~~~~~~~~~~---------~~~~~~~~~~v~~~~~ 344 (350)
+.+|.+..... ...+.+|..+|....+
T Consensus 358 i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 358 IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE
T ss_pred EEEEECCCCCCccccccchheeeccCCCCCeEEEEe
Confidence 55555433321 1134567666665443
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=4.2e-22 Score=176.67 Aligned_cols=195 Identities=12% Similarity=0.071 Sum_probs=154.4
Q ss_pred CeeEEEEecCCCEE-EEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIV-AFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~l-a~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|+|+|++| ++++.|+.|++||+.. ++....+. +...+.+++|+|+++.+++++. ++.|++||+.....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~--~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVP--AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEE--CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 48999999999987 5566899999999953 55555543 3348999999999888877776 59999999984322
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEE-EEEeCCCeEEEEeCCCCCceeeeecCCCe
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLA-SASYESSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~d~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
...+..+ ..+.+++|+|+|+.|+ +++.+ +.|++||+.+++..........+
T Consensus 109 -------------------------~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~~~~~~ 160 (391)
T 1l0q_A 109 -------------------------AGTVKTG--KSPLGLALSPDGKKLYVTNNGD-KTVSVINTVTKAVINTVSVGRSP 160 (391)
T ss_dssp -------------------------EEEEECS--SSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEECCSSE
T ss_pred -------------------------EEEEeCC--CCcceEEECCCCCEEEEEeCCC-CEEEEEECCCCcEEEEEecCCCc
Confidence 2223333 4789999999999885 55556 79999999998877766666778
Q ss_pred EEEEEcCCCCEE-EEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEEC--CCeEEEEEEeCC
Q 018806 258 SILKWSPTGDYF-FAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA--GSLTLGSIHFAS 327 (350)
Q Consensus 258 ~~~~~sp~g~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~~~~~~~~~~~ 327 (350)
.+++|+|+|++| ++++.++.|++||+++++......+...+.+++|+|+|++|++++. .+..+..|++..
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 999999999988 5667889999999999988766667778999999999999998874 456677777654
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.90 E-value=1.7e-21 Score=175.13 Aligned_cols=220 Identities=13% Similarity=0.089 Sum_probs=163.5
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEe-cCCcEEEEecCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGN 178 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~iwd~~~~~~ 178 (350)
..|.+++|+|+++++++++.|+.|++||+.. ++....+ ..|...+.+++|+|+++.+++++ .++.|++||+.....
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKT--LAYKATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTT--CCEEEEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCC--ceEEEEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 3689999999999999999999999999954 5554544 36788999999999988887777 479999999975433
Q ss_pred CceeecccccccceecCCCCC------------------ceEEeeecc-------CCCCCceeeEEECCCCCeEEEE-Ee
Q 018806 179 AASVRSGAASFLGALSRGPGT------------------RWTLVDFLR-------SQNGEQITALSWGPDGRYLASA-SY 232 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~-------~~~~~~v~~~~~sp~g~~l~~~-~~ 232 (350)
...+... .....+.+.+++ .+.+++.-. .+. ..+.+++|+|+++.++++ +.
T Consensus 247 ~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 247 IRKTDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-GNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EEECCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-ECEEEEEECSSTTEEEEEETT
T ss_pred EEEecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-CCcceEEECCCCCEEEEEecC
Confidence 2222211 112223333322 222333111 122 467889999999877655 55
Q ss_pred CCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEec---------------CCeEEEEeCCCCceeccccCCCC
Q 018806 233 ESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKF---------------DGTFYLWETNTWTSEPWSSTSGF 297 (350)
Q Consensus 233 d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~---------------d~~v~iwd~~~~~~~~~~~~~~~ 297 (350)
+ +.|++||+.+++......+...+.+++|+|+|++|++++. ||.|++||+.+++..........
T Consensus 324 ~-~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~ 402 (433)
T 3bws_A 324 C-SKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ 402 (433)
T ss_dssp T-TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS
T ss_pred C-CEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC
Confidence 6 7999999998887776677788999999999999988876 56999999999988665555678
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 298 VTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+.+++|+|+|++|++++..+..+..|++.
T Consensus 403 ~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 403 PTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 99999999999999887555566666654
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=1.6e-21 Score=172.87 Aligned_cols=196 Identities=16% Similarity=0.166 Sum_probs=152.2
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|+|++++|++++ .++.|++||+.. ++....+. +...+.+++|+|+++.+++++. ++.|++||+.....
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~--~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS--NTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCC--CeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 799999999999886655 579999999954 44444442 4457899999999888855554 79999999974322
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeE
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLS 258 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~ 258 (350)
...+..+ ..+.+++|+|++++|+.++..+|.|++||+++++......+...+.
T Consensus 151 -------------------------~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 203 (391)
T 1l0q_A 151 -------------------------INTVSVG--RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPS 203 (391)
T ss_dssp -------------------------EEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEE
T ss_pred -------------------------EEEEecC--CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 2223333 4679999999999885544433799999999998777777778899
Q ss_pred EEEEcCCCCEEEEEe---cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 259 ILKWSPTGDYFFAAK---FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 259 ~~~~sp~g~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+++|+|+|++|++++ .++.|++||+++++..........+.+++|+|+|++|++++..+..+..|++..
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 999999999998887 689999999999887554444456899999999999977775556777777654
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=1e-21 Score=177.37 Aligned_cols=173 Identities=13% Similarity=0.194 Sum_probs=125.8
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
+.+ ++++|++|++|+.||.|++||+.. ++....+ .+|...|.+++|+ ++.+++++.|++|++||+.....
T Consensus 122 ~~~--~~~~g~~l~sg~~dg~i~vwd~~~--~~~~~~~-~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~--- 191 (445)
T 2ovr_B 122 ITC--LQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTL-VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGEC--- 191 (445)
T ss_dssp EEE--EEEETTEEEEEETTSCEEEEETTT--CCEEEEC-CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEE---
T ss_pred EEE--EEEcCCEEEEEECCCcEEEEECCC--CcEEEEE-cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcE---
Confidence 454 455689999999999999999954 5555554 5899999999998 46888888899999999984322
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeEEE
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLSIL 260 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~ 260 (350)
...+.+|. ..|.+++|+ ++.+++++.| |+|++||+.+++... +..|...+.++
T Consensus 192 ----------------------~~~~~~h~-~~v~~~~~~--~~~l~s~s~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 192 ----------------------IHTLYGHT-STVRCMHLH--EKRVVSGSRD-ATLRVWDIETGQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp ----------------------EEEECCCS-SCEEEEEEE--TTEEEEEETT-SEEEEEESSSCCEEEEEECCSSCEEEE
T ss_pred ----------------------EEEECCCC-CcEEEEEec--CCEEEEEeCC-CEEEEEECCCCcEEEEEcCCcccEEEE
Confidence 33345554 577777774 4567777777 577777777766543 34566777777
Q ss_pred EEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 261 KWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 261 ~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
+| +++++++++.|+.|++||+++++. ..+..|...|.+++| ++++|++++
T Consensus 246 ~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 296 (445)
T 2ovr_B 246 QY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS 296 (445)
T ss_dssp EE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred EE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe
Confidence 77 667777777777777777777665 344567777777777 667777666
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=5.2e-21 Score=172.75 Aligned_cols=217 Identities=17% Similarity=0.226 Sum_probs=155.1
Q ss_pred CCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC
Q 018806 97 LPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 97 ~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
.+...|.++.|+ ++.|++++.|+.|++||+.. ++....+. +|...|.+++| +++.+++++.|+.|++||+...
T Consensus 197 ~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~--~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 197 GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET--GQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS--CCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC--CcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 356668888885 45688888888888888877 45556663 67788888888 5678888888888888888754
Q ss_pred CCCceeecccccccce--------ecCCCCCceEEe--------eeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEE
Q 018806 177 GNAASVRSGAASFLGA--------LSRGPGTRWTLV--------DFLRSQNGEQITALSWGPDGRYLASASYESSSFTIW 240 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iw 240 (350)
.....+. .....+.. ++.+.++.+.++ ..+.+|. ..+.++.+ +++++++++.| |.|++|
T Consensus 270 ~~~~~~~-~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~d-g~i~vw 344 (445)
T 2ovr_B 270 TCLHTLQ-GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-SLTSGMEL--KDNILVSGNAD-STVKIW 344 (445)
T ss_dssp EEEEEEC-CCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCC-SCEEEEEE--ETTEEEEEETT-SCEEEE
T ss_pred cEeEEec-CCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCc-ccEEEEEE--eCCEEEEEeCC-CeEEEE
Confidence 3332222 11111111 222334444433 3455664 57777776 56799999999 799999
Q ss_pred eCCCCCceeeee----cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-c-----ccCCCCeEEEEEcCCCCEE
Q 018806 241 DVAQGLGTPIRR----GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-W-----SSTSGFVTGATWDPEGRMI 310 (350)
Q Consensus 241 d~~~~~~~~~~~----~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~-----~~~~~~v~~~~~s~~g~~l 310 (350)
|+++++...... |...|.+++|+ +++|++++.||.|++||+++++... + ..+.+.|++++|+|+|.+|
T Consensus 345 d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 345 DIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp ETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred ECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 999987765443 66789999995 6799999999999999999998743 3 3678899999999999999
Q ss_pred EEEECCC---eEEEEEEeCC
Q 018806 311 LLAFAGS---LTLGSIHFAS 327 (350)
Q Consensus 311 ~~~~~~~---~~~~~~~~~~ 327 (350)
++++.+. ..+..|++..
T Consensus 423 a~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 423 AVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEECSSSSSCCEEEEEECCC
T ss_pred EEcccCCCCccEEEEEECCC
Confidence 9887433 3566776654
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=4.6e-21 Score=164.77 Aligned_cols=185 Identities=18% Similarity=0.265 Sum_probs=135.4
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCcee----------------------------------------E
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDAC----------------------------------------I 138 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~----------------------------------------~ 138 (350)
...|++++|+|++++||+|+.|++|++|++.. ++... .
T Consensus 67 ~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~--~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 67 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA 144 (318)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEeecCC--ceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEE
Confidence 34699999999999999999999999999854 22111 1
Q ss_pred ecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceee---ccccccccee-------------cCCCCCceE
Q 018806 139 LTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVR---SGAASFLGAL-------------SRGPGTRWT 202 (350)
Q Consensus 139 ~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~ 202 (350)
...+|...+..+.|+++++.+++++.|+.|++||+.......... ......+..+ ..+.++.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 123577788999999999999999999999999998544322111 1111111111 122333444
Q ss_pred Eeeec-------cCCCCCceeeEEECCCCCeEEEEE--eCCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEE
Q 018806 203 LVDFL-------RSQNGEQITALSWGPDGRYLASAS--YESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAA 272 (350)
Q Consensus 203 ~~~~~-------~~~~~~~v~~~~~sp~g~~l~~~~--~d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~ 272 (350)
+++.. ..+ ...+..+.|+|+++.+++++ .| |.|++||+++++... +..|.+.|.+++|+|+|++|+++
T Consensus 225 lwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~sg~~d-~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 225 IWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQ-NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp EEETTTCCEEEEEEC-SSCEEEEEEETTTTEEEEEECTTT-CCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEecccccccccccc-eeeeeeeeecccccceEEEEEcCC-CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 44321 122 25789999999999988765 56 799999999988765 55688999999999999999999
Q ss_pred ecCCeEEEEeCCCCc
Q 018806 273 KFDGTFYLWETNTWT 287 (350)
Q Consensus 273 ~~d~~v~iwd~~~~~ 287 (350)
+.|++|+|||+....
T Consensus 303 s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 303 AADETLRLWRCFELD 317 (318)
T ss_dssp ETTTEEEEECCSCCC
T ss_pred ecCCeEEEEECCCCC
Confidence 999999999997643
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=7.5e-22 Score=167.29 Aligned_cols=181 Identities=13% Similarity=0.077 Sum_probs=126.9
Q ss_pred hhhhhhhccccccCCCCcC----CCCccCeeEEEEec---CCCEEEEEECCCeEEEEEccCCCCCceeEecCCC--CCCe
Q 018806 77 LHGIISHSIKPLLHPDHVH----LLPEVDLQGVSWHQ---HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDS--QRDV 147 (350)
Q Consensus 77 ~~gh~~~~~~~~~~p~~~~----~~~~~~V~~v~~sp---~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~--~~~v 147 (350)
..||.+.+....+.|+... ..++..++.++|++ ++.+||+++.|++|+|||+.+ ++.+..+..+| ...+
T Consensus 152 ~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T--Gk~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 152 GTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT--GQLLKKMHIDDSYQASV 229 (356)
T ss_dssp SSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT--CCEEEEEECCC---CCC
T ss_pred ccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC--CcEEEEEcCCCcceeee
Confidence 4667776666666665332 24566899999999 779999999999999999954 77777664222 3467
Q ss_pred eEEEEeeCCCeEE------------EEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCce
Q 018806 148 KVLEWRPNGGRSL------------SVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI 215 (350)
Q Consensus 148 ~~~~~sp~~~~l~------------~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 215 (350)
.+++|+|+|..++ +++.|+++++||...+.....+. +..-.+|. ..+
T Consensus 230 ~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~--------------------~~~p~Gh~-~~~ 288 (356)
T 2w18_A 230 CHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML--------------------YCLPPGQA-GRF 288 (356)
T ss_dssp EEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE--------------------ECCCTTCC-CCE
T ss_pred EEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE--------------------eeccCCCc-cee
Confidence 8889999987663 34457999999987433221100 00012443 233
Q ss_pred eeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCe-EEEEEcCCCCEEEEEecCCeEEEEeC
Q 018806 216 TALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGL-SILKWSPTGDYFFAAKFDGTFYLWET 283 (350)
Q Consensus 216 ~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v-~~~~~sp~g~~l~~~~~d~~v~iwd~ 283 (350)
.+..+ ++..+++++.| |+|+|||+.+++..... .|...+ .+++|+|||++|++|+.|++|+|||+
T Consensus 289 lsg~~--sg~~lASgS~D-gTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDV--KDHCAAAILTS-GTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEE--ETTEEEEEETT-SCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred Ecccc--CCCEEEEEcCC-CcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 33333 37889999999 69999999999877655 465554 46899999999999999999999996
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=2.3e-21 Score=174.30 Aligned_cols=199 Identities=9% Similarity=0.023 Sum_probs=157.5
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEe----cCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACIL----TSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 175 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~----~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~ 175 (350)
..+.+++|+|++.++++++.++.|++||+.. ++..... ..+|...|.+++|+|++..+++++.|+.|++||+..
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINS--GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTT--CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCC--CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 3567899999777888878889999999864 4443321 236888999999999977677777789999999974
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-eCCCeEEEEeCCCCCceeeeecC
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS-YESSSFTIWDVAQGLGTPIRRGF 254 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~g~i~iwd~~~~~~~~~~~~~ 254 (350)
... ...+..|. ..+.+++|+|+++.+++++ .+ |.|++||+++++........
T Consensus 201 ~~~-------------------------~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 201 LAY-------------------------KATVDLTG-KWSKILLYDPIRDLVYCSNWIS-EDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp CCE-------------------------EEEEECSS-SSEEEEEEETTTTEEEEEETTT-TEEEEEETTTTEEEEECCCC
T ss_pred ceE-------------------------EEEEcCCC-CCeeEEEEcCCCCEEEEEecCC-CcEEEEECCCCcEEEEecCC
Confidence 332 22334443 6899999999999987666 56 79999999988776666666
Q ss_pred CCeEEEEEcCCCCEEEEEe--------cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 255 GGLSILKWSPTGDYFFAAK--------FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~--------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
..+.+++|+|+|++|++++ .|+.|++||+++++......+...+.+++|+|+|+.+++++..+..+..|++.
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 7799999999999998887 48899999999998866666667889999999999888777666677777775
Q ss_pred C
Q 018806 327 S 327 (350)
Q Consensus 327 ~ 327 (350)
.
T Consensus 334 ~ 334 (433)
T 3bws_A 334 E 334 (433)
T ss_dssp T
T ss_pred C
Confidence 4
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=9.2e-21 Score=169.48 Aligned_cols=187 Identities=17% Similarity=0.264 Sum_probs=145.5
Q ss_pred CCEEEEEECC------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC---cEEEEecCCCCCCce
Q 018806 111 KHIVAFISGS------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG---GICIWAPSYPGNAAS 181 (350)
Q Consensus 111 g~~la~~s~d------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~---~v~iwd~~~~~~~~~ 181 (350)
+..|++++.+ +.|++||++ +.....+ ..|...+.+++|+|+|+.+++++.++ .|++||+..+.. .
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~---g~~~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~- 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD---GYNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-R- 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT---SCSCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E-
T ss_pred CCEEEEEEecCCCCccceEEEEcCC---CCCCEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-E-
Confidence 6677776654 799999986 3333444 35788999999999999999988874 999999984322 1
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-eCC-CeEEEEeCCCCCceeeeecCCCeEE
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS-YES-SSFTIWDVAQGLGTPIRRGFGGLSI 259 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~-g~i~iwd~~~~~~~~~~~~~~~v~~ 259 (350)
.+..+. ..+.+++|+|||+.|+..+ .+. ..|++||+.+++...+..+...+.+
T Consensus 217 ------------------------~l~~~~-~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~ 271 (415)
T 2hqs_A 217 ------------------------QVASFP-RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTE 271 (415)
T ss_dssp ------------------------EEECCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEE
T ss_pred ------------------------EeecCC-CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccc
Confidence 133343 5899999999999988544 331 2599999999887777778888999
Q ss_pred EEEcCCCCEEEEEec-CC--eEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEEC--CCeEEEEEEeCCC
Q 018806 260 LKWSPTGDYFFAAKF-DG--TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA--GSLTLGSIHFASK 328 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~~~~~~~~~~~~ 328 (350)
++|+|||++|++++. ++ .|++||+.+++...+..+...+.+++|+|||++|++++. +...++.|++...
T Consensus 272 ~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred eEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 999999999988876 44 788889999887767677778999999999999998873 2467888887654
No 125
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=5.7e-21 Score=165.78 Aligned_cols=182 Identities=15% Similarity=0.220 Sum_probs=126.0
Q ss_pred cCCCCCCeeEEEEeeCC-CeEEEEecCCcEEEEecCCCCCCcee----ecccccccceecCCCCCc----------eEEe
Q 018806 140 TSDSQRDVKVLEWRPNG-GRSLSVGCKGGICIWAPSYPGNAASV----RSGAASFLGALSRGPGTR----------WTLV 204 (350)
Q Consensus 140 ~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----------~~~~ 204 (350)
..+|.+.|++++|+|++ +.|++++.|++|+|||+......... ..+....+..+.+.+++. +..+
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 46899999999999984 56777888999999999854432211 122333444455544443 2333
Q ss_pred e--------eccCC------------------------------------------CCCceeeEEECCCC--CeEEEEEe
Q 018806 205 D--------FLRSQ------------------------------------------NGEQITALSWGPDG--RYLASASY 232 (350)
Q Consensus 205 ~--------~~~~~------------------------------------------~~~~v~~~~~sp~g--~~l~~~~~ 232 (350)
. ....+ +...+..++|++++ ..+++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 3 11111 01344556666543 34555666
Q ss_pred CCCeEEEEeCCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEE
Q 018806 233 ESSSFTIWDVAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMIL 311 (350)
Q Consensus 233 d~g~i~iwd~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 311 (350)
| +.|++||+++++... +..|...|.+++|+|++++|++++.|+.|++||+++.+......+...+..++|+|++.+++
T Consensus 194 d-~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 194 D-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 272 (340)
T ss_dssp T-SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEE
T ss_pred C-CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceee
Confidence 6 477777777665543 34577899999999999999999999999999999998876666778899999999998887
Q ss_pred EEECCCeEEEE
Q 018806 312 LAFAGSLTLGS 322 (350)
Q Consensus 312 ~~~~~~~~~~~ 322 (350)
.+.++.+.+|.
T Consensus 273 ~~~d~~i~iwd 283 (340)
T 4aow_A 273 AATGPSIKIWD 283 (340)
T ss_dssp EEETTEEEEEE
T ss_pred ccCCCEEEEEE
Confidence 77666555544
No 126
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=2.3e-21 Score=174.59 Aligned_cols=190 Identities=15% Similarity=0.225 Sum_probs=147.8
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..|.+++|++ .+|++++.|+.|++||+.............+|...|.+++| +++.+++++.|+.|++||+.....
T Consensus 214 ~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~- 288 (435)
T 1p22_A 214 EAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF- 288 (435)
T ss_dssp SCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE-
T ss_pred CcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE-
Confidence 3688999874 59999999999999999753333222444689999999999 567888888999999999984332
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee-eeecCCCeE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP-IRRGFGGLS 258 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~-~~~~~~~v~ 258 (350)
...+.+|. ..|.+++| +++++++++.| |.|++||+++++... +..|...+.
T Consensus 289 ------------------------~~~~~~~~-~~v~~~~~--~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~h~~~v~ 340 (435)
T 1p22_A 289 ------------------------VRTLNGHK-RGIACLQY--RDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVR 340 (435)
T ss_dssp ------------------------EEEEECCS-SCEEEEEE--ETTEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------------------------EEEEcCCC-CcEEEEEe--CCCEEEEEeCC-CeEEEEECCCCCEEEEEeCCcCcEE
Confidence 34456665 68999998 47899999999 699999999988765 445788999
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEeCCCCc---------e-eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 259 ILKWSPTGDYFFAAKFDGTFYLWETNTWT---------S-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 259 ~~~~sp~g~~l~~~~~d~~v~iwd~~~~~---------~-~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+++| ++++|++++.||.|++||+++++ . ..+..|...|.+++| ++++|++++. +..+..|++..
T Consensus 341 ~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~-Dg~i~iwd~~~ 414 (435)
T 1p22_A 341 CIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSH-DDTILIWDFLN 414 (435)
T ss_dssp EEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCS-SSEEEEEC---
T ss_pred EEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeC-CCEEEEEECCC
Confidence 9999 78899999999999999997654 2 456689999999999 6888887762 23445555443
No 127
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.88 E-value=2.2e-21 Score=170.02 Aligned_cols=126 Identities=17% Similarity=0.399 Sum_probs=107.5
Q ss_pred eEecCCCCCCeeEEEEeeC---CCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCC
Q 018806 137 CILTSDSQRDVKVLEWRPN---GGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGE 213 (350)
Q Consensus 137 ~~~~~~~~~~v~~~~~sp~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (350)
.....+|.+.|++++|+|+ |+.+++++.|+.|++||+...+.. +...+.+|. .
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~h~-~ 87 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT-----------------------IPKAQQMHT-G 87 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE-----------------------EEEEEEECS-S
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce-----------------------eEEEecccc-C
Confidence 3344689999999999999 477888888999999999842221 123455665 7
Q ss_pred ceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEE--cCCCCEEEEEecCCeEEEEeCCCCc
Q 018806 214 QITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKW--SPTGDYFFAAKFDGTFYLWETNTWT 287 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~--sp~g~~l~~~~~d~~v~iwd~~~~~ 287 (350)
.|.+++|+|++++|++++.| |.|++||+.+++...+..|...|.+++| +|++++|++++.|+.|++||+++++
T Consensus 88 ~v~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCD-KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp CEEEEEECTTSSEEEEEETT-SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred CEEEEEECcCCCEEEEEcCC-CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999999999999999 7999999999988888889999999999 8999999999999999999998764
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.6e-20 Score=159.26 Aligned_cols=216 Identities=13% Similarity=0.159 Sum_probs=152.1
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCC-CCCeeEEEEeeCCCeEEEEec--CCcEEEEecCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDS-QRDVKVLEWRPNGGRSLSVGC--KGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~--d~~v~iwd~~~~ 176 (350)
..|.+++|+|+|++|++++ ++.|++||+... ++. ..+...+ ...+.+++|+|+++.+++++. ++...||.++..
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD-PSP-EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSC-CSC-EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCC-CCc-eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence 4699999999999999976 789999999530 222 2333333 478899999999988888884 356667766532
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEE-EEEeCCCeEEEEeC--CCCCceeeeec
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLA-SASYESSSFTIWDV--AQGLGTPIRRG 253 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~d~g~i~iwd~--~~~~~~~~~~~ 253 (350)
.... ..+..+ ..+..++|+|+++.|+ ++..+ +.+++|++ .++....+..+
T Consensus 119 ~~~~------------------------~~~~~~--~~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 119 GGTP------------------------RLMTKN--LPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp CCCC------------------------EECCSS--SSEEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCS
T ss_pred CCce------------------------EEeecC--CCccceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccC
Confidence 2111 112222 3588899999999888 55566 68999985 45555556667
Q ss_pred CCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCC--CCceeccccCCCCeEEEEEcCCCCEEEEEEC----------CCeEE
Q 018806 254 FGGLSILKWSPTGDYFFAAK-FDGTFYLWETN--TWTSEPWSSTSGFVTGATWDPEGRMILLAFA----------GSLTL 320 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----------~~~~~ 320 (350)
...+.+++|+|+|++|++++ .++.+++|+++ .++...+..+...+..++|+|+|++|++++. ....+
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 78899999999999887766 48888888875 4445566677778999999999999988863 22567
Q ss_pred EEEEeCCCCC----CCceeecccccceee
Q 018806 321 GSIHFASKPP----SLDAHLLPVDLPDIV 345 (350)
Q Consensus 321 ~~~~~~~~~~----~~~~~~~~v~~~~~~ 345 (350)
+.|++..... .+..|...+..+.+.
T Consensus 252 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 280 (297)
T 2ojh_A 252 QLMDMDGGNVETLFDLFGGQGTMNSPNWS 280 (297)
T ss_dssp EEEETTSCSCEEEEEEEESTTTSCSCCBC
T ss_pred EEEecCCCCceeeeccCCCCcccccceEC
Confidence 7777765433 112444455554443
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.2e-21 Score=176.01 Aligned_cols=198 Identities=12% Similarity=0.092 Sum_probs=142.6
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCC------C--CceeE----ecCCCCCCeeEEEEeeCCCeEE----EE
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSE------G--KDACI----LTSDSQRDVKVLEWRPNGGRSL----SV 162 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~------~--~~~~~----~~~~~~~~v~~~~~sp~~~~l~----~~ 162 (350)
...++.+++++++.++++++.++ +++|+..... . ..... ....+...|.+++|+|+|+.++ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44689999999999999998888 8888753100 0 00000 1113566799999999988888 44
Q ss_pred ecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-CCeEEEEEeCCCeEEEEe
Q 018806 163 GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRYLASASYESSSFTIWD 241 (350)
Q Consensus 163 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd 241 (350)
+.|+.|+|||+........ .. ...+.....+.+|. ..|.+++|+|+ +.+|++++.| |+|++||
T Consensus 115 s~d~~v~iwd~~~~~~~~~-~~-------------~~~~~~~~~~~~h~-~~V~~v~~~p~~~~~las~s~D-g~v~iwD 178 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAK-QQ-------------KRPFAYHKLLKDAG-GMVIDMKWNPTVPSMVAVCLAD-GSIAVLQ 178 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTC-SS-------------CCCSEEEECCCSGG-GSEEEEEECSSCTTEEEEEETT-SCEEEEE
T ss_pred CCCceEEEEEccccccCCc-CC-------------cceeeeeeccCCCC-CceEEEEECCCCCCEEEEEECC-CeEEEEE
Confidence 5589999999873200000 00 00111234456675 79999999998 7889999999 7999999
Q ss_pred CCCCCcee-eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-ecccc-------CCCCeEEEEEcCCCCEEEE
Q 018806 242 VAQGLGTP-IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSS-------TSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 242 ~~~~~~~~-~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~-------~~~~v~~~~~s~~g~~l~~ 312 (350)
++++.... ...|...+.+++|+|+|++|++|+.||.|++||++ ++. ..+.. |...+.+++|++++.++++
T Consensus 179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred cCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 99885442 34567889999999999999999999999999998 443 22222 2237899999999988876
Q ss_pred EE
Q 018806 313 AF 314 (350)
Q Consensus 313 ~~ 314 (350)
..
T Consensus 258 ~~ 259 (434)
T 2oit_A 258 YA 259 (434)
T ss_dssp EE
T ss_pred Ec
Confidence 55
No 130
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=6.8e-21 Score=169.36 Aligned_cols=176 Identities=12% Similarity=0.249 Sum_probs=126.0
Q ss_pred CeeEEEEecCC---CEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCe-EEEEecCCcEEEEecCCC
Q 018806 101 DLQGVSWHQHK---HIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGR-SLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 101 ~V~~v~~sp~g---~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~~d~~v~iwd~~~~ 176 (350)
.+.++.|+|.+ .++++++.|+.|++||+.. +.....+ ..|...|.+++|+|++.. +++++.|+.|++||+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 143 TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS--GSCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp CEEEEEECSSCSSCCEEEEEESSSSEEEEESSS--SCCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC--cceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 57888888844 4899999999999999854 4444444 478999999999999886 667777899999999854
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce--------
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT-------- 248 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~-------- 248 (350)
............. ...........|. ..|.+++|+|++++|++++.| |.|++||+.+++..
T Consensus 220 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~ 288 (408)
T 4a11_B 220 SGCLITLDQHNGK---------KSQAVESANTAHN-GKVNGLCFTSDGLHLLTVGTD-NRMRLWNSSNGENTLVNYGKVC 288 (408)
T ss_dssp SCCSEECCTTTTC---------SCCCTTTSSCSCS-SCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCBCCCCCCCCC
T ss_pred Ccccccccccccc---------cceeecccccccc-CceeEEEEcCCCCEEEEecCC-CeEEEEECCCCccceecccccc
Confidence 4222111100000 0000011123454 689999999999999999988 69999998765321
Q ss_pred ----------------------------------------eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 249 ----------------------------------------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 249 ----------------------------------------~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
.+..|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 289 NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred ccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 1234678899999999999999999999999999999876
Q ss_pred ec
Q 018806 289 EP 290 (350)
Q Consensus 289 ~~ 290 (350)
..
T Consensus 369 ~~ 370 (408)
T 4a11_B 369 VP 370 (408)
T ss_dssp --
T ss_pred cC
Confidence 43
No 131
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=3.5e-20 Score=173.03 Aligned_cols=194 Identities=13% Similarity=0.075 Sum_probs=142.2
Q ss_pred CeeEEEEecCCCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec---CCcEEEEecCC-
Q 018806 101 DLQGVSWHQHKHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC---KGGICIWAPSY- 175 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---d~~v~iwd~~~- 175 (350)
+|++++|+|||++||+++. ||+++||+++ +.....++..+...+..++|+|| +.++++.. +...++|.+..
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~---~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYD---GGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEE---TTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEc---CCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 5999999999999999887 9999999985 33334454344468999999999 55554543 35567776653
Q ss_pred -CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEE-EeCCCeEEEEeCCCCCceeeeec
Q 018806 176 -PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASA-SYESSSFTIWDVAQGLGTPIRRG 253 (350)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~-~~d~g~i~iwd~~~~~~~~~~~~ 253 (350)
.+.... +... ..+...+|+|+|+.++.. +.+ +.+.+||+.+++...+..+
T Consensus 99 ~~g~~~~-------------------------l~~~--~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~ 150 (582)
T 3o4h_A 99 RPGEEQR-------------------------LEAV--KPMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARL 150 (582)
T ss_dssp STTCCEE-------------------------CTTS--CSBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEE
T ss_pred CCCcccc-------------------------ccCC--CCceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecC
Confidence 322211 1111 234466888988764433 334 3666999999877766655
Q ss_pred CCCeEEEEEcCCCCEEEEEecC----CeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeCCC
Q 018806 254 FGGLSILKWSPTGDYFFAAKFD----GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFASK 328 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~~~ 328 (350)
.. .+++|+|||++|++++.+ +.|++||+.+++...+..+...+..++|||||++|+++. ++...++.|++...
T Consensus 151 ~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 151 PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 44 889999999999988776 789999999999888888888899999999999999554 33347777776544
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=9.3e-20 Score=174.95 Aligned_cols=197 Identities=14% Similarity=0.210 Sum_probs=146.9
Q ss_pred ccCeeEEEEecCCCEEEEEEC-CC-----eEEEEEccCCCCCceeEecCCCC------------------------CCee
Q 018806 99 EVDLQGVSWHQHKHIVAFISG-ST-----QVIVRDYEDSEGKDACILTSDSQ------------------------RDVK 148 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~-d~-----~i~iw~~~~~~~~~~~~~~~~~~------------------------~~v~ 148 (350)
...|.+++|||||++|++++. |+ .|++||+.. ++..... ..+. ..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS--GQTRLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT--CCEEEEE-CGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC--CceeEcc-chhhcccccccccchhhhhhhhhhhccccCcc
Confidence 345899999999999999998 88 899999864 4433333 2222 2388
Q ss_pred EEEEeeCCCeEEEEecCCcEEEEecCCCC--CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCe
Q 018806 149 VLEWRPNGGRSLSVGCKGGICIWAPSYPG--NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRY 226 (350)
Q Consensus 149 ~~~~sp~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 226 (350)
+++|||||+.+++++. +.|++||+..+. .... +..+. ..+..++|||||++
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~-------------------------l~~~~-~~~~~~~~SPDG~~ 165 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ-------------------------LTHGE-GFATDAKLSPKGGF 165 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB-------------------------CCCSS-SCEEEEEECTTSSE
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE-------------------------cccCC-cccccccCCCCCCE
Confidence 9999999888877765 999999998442 2211 23332 57899999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCceeeeecC-CC----------------eEEEEEcCCCCEEEEEecCC-------------
Q 018806 227 LASASYESSSFTIWDVAQGLGTPIRRGF-GG----------------LSILKWSPTGDYFFAAKFDG------------- 276 (350)
Q Consensus 227 l~~~~~d~g~i~iwd~~~~~~~~~~~~~-~~----------------v~~~~~sp~g~~l~~~~~d~------------- 276 (350)
|++++. +.|++||+.+++...+.... .. +..++|||||++|++++.|+
T Consensus 166 la~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p 243 (741)
T 2ecf_A 166 VSFIRG--RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYA 243 (741)
T ss_dssp EEEEET--TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECS
T ss_pred EEEEeC--CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCC
Confidence 999874 38999999988765544322 21 47799999999999887765
Q ss_pred --------------------eEEEEeCCC-Cceeccc---cCCCCeEEEEEcCCCCEEEEEEC----CCeEEEEEEeCCC
Q 018806 277 --------------------TFYLWETNT-WTSEPWS---STSGFVTGATWDPEGRMILLAFA----GSLTLGSIHFASK 328 (350)
Q Consensus 277 --------------------~v~iwd~~~-~~~~~~~---~~~~~v~~~~~s~~g~~l~~~~~----~~~~~~~~~~~~~ 328 (350)
.|++||+.+ ++...+. .+...+.+++| |||++|+++.. ....++.|+....
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 244 DRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp SCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 899999998 8765443 46678999999 99999998752 2356666665543
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=2.4e-18 Score=149.26 Aligned_cols=202 Identities=12% Similarity=0.174 Sum_probs=142.0
Q ss_pred cCeeEEEEecCCCEEEEEECC-CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGS-TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d-~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
..+.+++|+|+|++|++++.+ +.|.+|+++..++.............+..++|+|+++.+++++. ++.|.+||+. .+
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE-DG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE-TT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC-CC
Confidence 357889999999999998886 99999999733343222111122337899999999888877776 6889999995 22
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-eCCCeEEEEeCCC-CCceee-----
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS-YESSSFTIWDVAQ-GLGTPI----- 250 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~g~i~iwd~~~-~~~~~~----- 250 (350)
... .....+..+ ..+.+++|+|+|+++++++ .+ +.|.+||+.+ ++....
T Consensus 117 ~~~---------------------~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~~~~~ 172 (343)
T 1ri6_A 117 LPV---------------------GVVDVVEGL--DGCHSANISPDNRTLWVPALKQ-DRICLFTVSDDGHLVAQDPAEV 172 (343)
T ss_dssp EEE---------------------EEEEEECCC--TTBCCCEECTTSSEEEEEEGGG-TEEEEEEECTTSCEEEEEEEEE
T ss_pred ccc---------------------cccccccCC--CCceEEEECCCCCEEEEecCCC-CEEEEEEecCCCceeeeccccc
Confidence 111 112223333 4688999999999998887 66 6999999987 544321
Q ss_pred ee-cCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCC--Ccee---ccc---c---CCCCeEEEEEcCCCCEEEEEECCC
Q 018806 251 RR-GFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNT--WTSE---PWS---S---TSGFVTGATWDPEGRMILLAFAGS 317 (350)
Q Consensus 251 ~~-~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~--~~~~---~~~---~---~~~~v~~~~~s~~g~~l~~~~~~~ 317 (350)
.. ....+..++|+|+|+++++++ .++.|++|+++. ++.. ... . ....+..++|+|+|++|+++...+
T Consensus 173 ~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~ 252 (343)
T 1ri6_A 173 TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA 252 (343)
T ss_dssp ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT
T ss_pred ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC
Confidence 22 234688899999999876555 789999999954 4331 111 1 123567899999999998777555
Q ss_pred eEEEEEEeC
Q 018806 318 LTLGSIHFA 326 (350)
Q Consensus 318 ~~~~~~~~~ 326 (350)
..+..|++.
T Consensus 253 ~~i~v~d~~ 261 (343)
T 1ri6_A 253 SLITVFSVS 261 (343)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEEc
Confidence 566666665
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=2.7e-19 Score=160.59 Aligned_cols=199 Identities=13% Similarity=0.086 Sum_probs=138.8
Q ss_pred ccCeeEEEEecCCCEEE----EEECCCeEEEEEccCC-----CC-Cc--eeEecCCCCCCeeEEEEeeC-CCeEEEEecC
Q 018806 99 EVDLQGVSWHQHKHIVA----FISGSTQVIVRDYEDS-----EG-KD--ACILTSDSQRDVKVLEWRPN-GGRSLSVGCK 165 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la----~~s~d~~i~iw~~~~~-----~~-~~--~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d 165 (350)
...|++++|+|+|++|| +++.|+.|+|||+... .. +. ......+|...|.+++|+|+ +..+++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 45699999999999999 7788999999998642 00 11 12333468899999999998 5677778889
Q ss_pred CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC
Q 018806 166 GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG 245 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~ 245 (350)
++|++||++.... .....+|. ..|.+++|+|+|++|++++.| |+|++||.+ +
T Consensus 172 g~v~iwD~~~~~~-------------------------~~~~~~~~-~~v~~v~wspdg~~lasgs~d-g~v~iwd~~-~ 223 (434)
T 2oit_A 172 GSIAVLQVTETVK-------------------------VCATLPST-VAVTSVCWSPKGKQLAVGKQN-GTVVQYLPT-L 223 (434)
T ss_dssp SCEEEEEESSSEE-------------------------EEEEECGG-GCEEEEEECTTSSCEEEEETT-SCEEEECTT-C
T ss_pred CeEEEEEcCCCcc-------------------------eeeccCCC-CceeEEEEcCCCCEEEEEcCC-CcEEEEccC-C
Confidence 9999999984311 11223444 689999999999999999999 699999998 4
Q ss_pred Ccee-eeec-------CCCeEEEEEcCCCCEEEEE-ecCC------eEEEEeCCCCce---eccc----------cCCCC
Q 018806 246 LGTP-IRRG-------FGGLSILKWSPTGDYFFAA-KFDG------TFYLWETNTWTS---EPWS----------STSGF 297 (350)
Q Consensus 246 ~~~~-~~~~-------~~~v~~~~~sp~g~~l~~~-~~d~------~v~iwd~~~~~~---~~~~----------~~~~~ 297 (350)
+... +..+ ...+.+++|++++.++++. ..+| .+++|+++..+. ..+. ....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~ 303 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQH 303 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCC
T ss_pred cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCc
Confidence 3332 2222 2378999999998887543 3443 499999986531 1111 11122
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 298 VTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
...+.+-++.+++++++.....+..+..
T Consensus 304 ~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 304 HYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp CEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred ceeeehhccCCEEEEecCCCCceeEEEe
Confidence 2334444888888888865555555544
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=2e-19 Score=152.48 Aligned_cols=189 Identities=15% Similarity=0.162 Sum_probs=138.8
Q ss_pred cCeeEEEEecCCCEEEEEE--CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEE-EecCCcEEEEecCCC
Q 018806 100 VDLQGVSWHQHKHIVAFIS--GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLS-VGCKGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s--~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~iwd~~~~ 176 (350)
..|.+++|+|+|++|++++ .++...||.++...+. ...+. +...+..++|+|+++.+++ +..++.++||+++..
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 4588899999999999998 4456777776544333 23332 2335899999999888874 455799999997633
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCC--CCCceeeeecC
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVA--QGLGTPIRRGF 254 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~--~~~~~~~~~~~ 254 (350)
... ...+..+. ..+.+++|+|+|+.|++++..++.+.+|++. .+....+..+.
T Consensus 162 ~~~------------------------~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 162 SGV------------------------ETRLTHGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp TCC------------------------EEECCCSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred CCc------------------------ceEcccCC-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 211 11233333 5789999999999998877533688888875 33444455566
Q ss_pred CCeEEEEEcCCCCEEEEEecC-----------CeEEEEeCCCCceec---cccCCCCeEEEEEcCCCCEEEEEECC
Q 018806 255 GGLSILKWSPTGDYFFAAKFD-----------GTFYLWETNTWTSEP---WSSTSGFVTGATWDPEGRMILLAFAG 316 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d-----------~~v~iwd~~~~~~~~---~~~~~~~v~~~~~s~~g~~l~~~~~~ 316 (350)
..+..++|+|+|++|++++.+ +.|++||+++++... +..|...+..++|+|+|++|+++++.
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 778899999999999888765 569999999887643 33677889999999999999988743
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=4.4e-18 Score=148.33 Aligned_cols=203 Identities=13% Similarity=0.152 Sum_probs=137.2
Q ss_pred cCeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCc--eeEecCC--------CCCCeeEEEEeeCCCeEEEEec-CCc
Q 018806 100 VDLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKD--ACILTSD--------SQRDVKVLEWRPNGGRSLSVGC-KGG 167 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~--~~~~~~~--------~~~~v~~~~~sp~~~~l~~~~~-d~~ 167 (350)
..+..++|+|||++|++++ .++.+.+|++.. ++.. ....... +...+.+++|+|+|+ ++++.. ++.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~ 163 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAA-DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK 163 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECT-TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC-CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE
Confidence 4578899999999999888 689999999953 2221 2222111 122488999999988 665555 689
Q ss_pred EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC--C
Q 018806 168 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ--G 245 (350)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~--~ 245 (350)
|++|++...+.... ...+..+....+..++|+|||+++++++..++.|.+|++.. +
T Consensus 164 v~~~~~~~~g~~~~----------------------~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 164 VYVYNVSDAGQLSE----------------------QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp EEEEEECTTSCEEE----------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred EEEEEECCCCcEEE----------------------eeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 99999983322111 11112222246788999999998887665547999999874 4
Q ss_pred Cceeee---ecC------CCeEEEEEcCCCCEEE-EEecCCeEEEEeCCC-Cce---eccccCCCCeEEEEEcCCCCEEE
Q 018806 246 LGTPIR---RGF------GGLSILKWSPTGDYFF-AAKFDGTFYLWETNT-WTS---EPWSSTSGFVTGATWDPEGRMIL 311 (350)
Q Consensus 246 ~~~~~~---~~~------~~v~~~~~sp~g~~l~-~~~~d~~v~iwd~~~-~~~---~~~~~~~~~v~~~~~s~~g~~l~ 311 (350)
+..... ... ..+..++|+|||++|+ +...++.|.+|++.. ++. ..+..+...+..++|+|||++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 332211 111 3488899999999885 455689999999973 222 22334455688999999999999
Q ss_pred EEECCCeEEEEEEeC
Q 018806 312 LAFAGSLTLGSIHFA 326 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~ 326 (350)
++..+...+..|++.
T Consensus 302 v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 302 VVNQNTDNATLYARD 316 (347)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEEcCCCcEEEEEEe
Confidence 988554455555543
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=2.3e-18 Score=149.05 Aligned_cols=196 Identities=10% Similarity=0.072 Sum_probs=140.9
Q ss_pred CeeEEEEecCCCEEEEEEC-CCeEEEEEccCCCCCc-eeEecCCCCCCeeEEEEeeCCCeEEEEecC-C--cEEEEecCC
Q 018806 101 DLQGVSWHQHKHIVAFISG-STQVIVRDYEDSEGKD-ACILTSDSQRDVKVLEWRPNGGRSLSVGCK-G--GICIWAPSY 175 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~-d~~i~iw~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~--~v~iwd~~~ 175 (350)
.+ +++|+|+|++|++++. ++.|.+||... ++. ...+ ..+..+..+++|+|+|+.+++...+ + .|.+||+..
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~--~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQL--EPPKVVAI-QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSS--SSCEEEEE-EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCC--CceeEEec-ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 35 8999999997777766 88999999864 443 3333 2345555559999998888743334 3 899999974
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCe-EEEEeCCCCCce-----e
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSS-FTIWDVAQGLGT-----P 249 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~-i~iwd~~~~~~~-----~ 249 (350)
.+.. ..+..+ ....+++|+|+|+++++++.+++. |.+|++...... .
T Consensus 118 ~~~~-------------------------~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 118 NKFI-------------------------STIPIP--YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp TEEE-------------------------EEEECC--TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCeE-------------------------EEEECC--CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 3321 122222 356899999999987777655357 999998864332 2
Q ss_pred eeecCCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCCCCce---eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 250 IRRGFGGLSILKWSPTGDYFFAA-KFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 250 ~~~~~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
.......+..++|+|+|++++++ ..++.|++||+++++. .........+..++|+|||++|+++..++..+..|+.
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 22334568899999999977555 4688999999998886 4444455678899999999999888766666777776
Q ss_pred CC
Q 018806 326 AS 327 (350)
Q Consensus 326 ~~ 327 (350)
..
T Consensus 251 ~~ 252 (331)
T 3u4y_A 251 LS 252 (331)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=5.9e-18 Score=146.81 Aligned_cols=204 Identities=15% Similarity=0.180 Sum_probs=136.9
Q ss_pred CeeEEEEecCCCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEe-cCCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~iwd~~~~~~ 178 (350)
.+.+++|+|+|++|++++. ++.|.+|++............ .....+.+++|+|+++.+++++ .++.|++||+...+.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 6789999999998877765 889999999521111112222 3345689999999988888877 679999999984232
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC--CCceee--ee--
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ--GLGTPI--RR-- 252 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~--~~~~~~--~~-- 252 (350)
...+.. ..+..+....+..++|+|+|+++++++..++.|.+|++.. ++.... ..
T Consensus 164 ~~~~~~--------------------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 164 LVAQDP--------------------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp EEEEEE--------------------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS
T ss_pred eeeecc--------------------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecccc
Confidence 211110 0112222247788999999998877764336999999954 433211 11
Q ss_pred --c---CCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCC--CCce--eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 018806 253 --G---FGGLSILKWSPTGDYFFAA-KFDGTFYLWETN--TWTS--EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 253 --~---~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~--~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~ 322 (350)
. ...+..++|+|+|++|+++ ..++.|++||++ +++. .........+..++|+|+|++|++++..+..+..
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 1 2356689999999988754 478999999998 3333 2222223348899999999999988744444444
Q ss_pred EEe
Q 018806 323 IHF 325 (350)
Q Consensus 323 ~~~ 325 (350)
|++
T Consensus 304 ~~~ 306 (343)
T 1ri6_A 304 YEI 306 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=3.7e-19 Score=170.76 Aligned_cols=214 Identities=13% Similarity=0.138 Sum_probs=144.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|.+++|||||++|++++. +.|++||+..........+ ..|...+..++|+|||+.+++++ ++.|++||+..+. ..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l-~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~ 185 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL-THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QM 185 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC-CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc-ccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EE
Confidence 4889999999999999886 8999999964210022333 35777899999999988777665 5799999987432 11
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC-------------------------
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS------------------------- 235 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g------------------------- 235 (350)
.+....... +..+. ..|. .... ...+.+++|||||++|++++.+.+
T Consensus 186 ~~~~~~~~~---~~~g~-~~~v----~~~~-~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 186 QLTADGSTT---IGNGI-AEFV----ADEE-MDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp ECCCCCCSS---EEESC-CCHH----HHHH-SCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred EeccCCccc---eeccc-ccee----eeec-cccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 111100000 00000 0000 0000 123578999999999999987621
Q ss_pred -------eEEEEeCCC-CCceeee---ecCCCeEEEEEcCCCCEEEEEec-----CCeEEEEeCCCCceecccc-CC-C-
Q 018806 236 -------SFTIWDVAQ-GLGTPIR---RGFGGLSILKWSPTGDYFFAAKF-----DGTFYLWETNTWTSEPWSS-TS-G- 296 (350)
Q Consensus 236 -------~i~iwd~~~-~~~~~~~---~~~~~v~~~~~sp~g~~l~~~~~-----d~~v~iwd~~~~~~~~~~~-~~-~- 296 (350)
.|++||+.+ ++...+. .+...+..++| |||++|++++. +..|++||+.+++...+.. +. .
T Consensus 257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 789999998 8765544 35567899999 99999987654 4689999999998754432 22 2
Q ss_pred --CeEEEEEcCCCCEEEEEE-CCCeEEEEEEeCCC
Q 018806 297 --FVTGATWDPEGRMILLAF-AGSLTLGSIHFASK 328 (350)
Q Consensus 297 --~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~~~ 328 (350)
.+..++|+|||++++++. ++...+|.++....
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 456899999999777665 44467887775544
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=2e-19 Score=172.09 Aligned_cols=197 Identities=13% Similarity=0.120 Sum_probs=144.4
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCC---CeeEEEEeeCCCeEEEEecC---------CcEE
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQR---DVKVLEWRPNGGRSLSVGCK---------GGIC 169 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~d---------~~v~ 169 (350)
+.+++|+|||+++++ +.||+|++||+.+ ++....+ ..|.. .|.+++|||||+++++++.+ +.++
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~--g~~~~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVET--NTSTVLI-EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGG--CCCEEEE-CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCC--CcEEEEe-ccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 677899999997766 7899999999965 4443433 34443 49999999999988888764 6788
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP 249 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~ 249 (350)
+||+..+.. ..+.. ..++. ..+..++|||||+.|++++. +.|++||+.+++...
T Consensus 95 ~~d~~~~~~-~~l~~----------------------~~~~~-~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDP----------------------PEVSN-AKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIR 148 (723)
T ss_dssp EEESSSCCC-EECCC----------------------TTCCS-CCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEE
T ss_pred EEECCCCce-EeccC----------------------Ccccc-ccccccEECCCCCEEEEEEC--CeEEEEECCCCceEE
Confidence 999984432 11111 12222 35889999999999999876 389999999987766
Q ss_pred eeec-CCC------------------eEEEEEcCCCCEEEEEecCC----------------------------------
Q 018806 250 IRRG-FGG------------------LSILKWSPTGDYFFAAKFDG---------------------------------- 276 (350)
Q Consensus 250 ~~~~-~~~------------------v~~~~~sp~g~~l~~~~~d~---------------------------------- 276 (350)
+... ... +.+++|||||++|++++.|+
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 228 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence 5443 222 27899999999999887543
Q ss_pred eEEEEeCCCCce-eccccC------CCCeEEEEEcCCCCEEEEEEC---CCeEEEEEEeCCC
Q 018806 277 TFYLWETNTWTS-EPWSST------SGFVTGATWDPEGRMILLAFA---GSLTLGSIHFASK 328 (350)
Q Consensus 277 ~v~iwd~~~~~~-~~~~~~------~~~v~~~~~s~~g~~l~~~~~---~~~~~~~~~~~~~ 328 (350)
.|++||+.+++. ..+..+ ...+.+++|||||++|++... ....++.|++...
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 799999998875 444433 567899999999999877653 2356666666543
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.81 E-value=6.8e-18 Score=146.03 Aligned_cols=202 Identities=11% Similarity=0.098 Sum_probs=143.8
Q ss_pred eeEEEEecCCCEEEEEECCC---eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC-Cc-EEEEecCCC
Q 018806 102 LQGVSWHQHKHIVAFISGST---QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GG-ICIWAPSYP 176 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~---~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~~-v~iwd~~~~ 176 (350)
..+++|+|+|++|+++..++ .|.+||+.. ++....+. ......+++|+|+|+.+++++.+ +. +.+|++...
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~--~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLK--NKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTT--TEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCC--CCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 33499999999999544442 899999854 44444442 34567999999999877777664 78 999999844
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc---eeeeec
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG---TPIRRG 253 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~---~~~~~~ 253 (350)
+...... ...+.. ...+..++|+|+|++++.++..++.|.+||+.+++. ......
T Consensus 162 g~~~~~~--------------------~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 162 GVLFDTG--------------------QEFISG--GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp CCEEEEE--------------------EEEECS--SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred CcEeecC--------------------CccccC--CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 3221110 011111 246789999999998877765447999999998887 555555
Q ss_pred CCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceecc---cc----CCC---CeEEEEEcCCCCEEEEEECCCeEEEE
Q 018806 254 FGGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPW---SS----TSG---FVTGATWDPEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~---~~----~~~---~v~~~~~s~~g~~l~~~~~~~~~~~~ 322 (350)
...+..++|+|+|++|+++. .++.|.+||+.+++...+ .. +.. ....++|+|||++|++++.....+..
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 299 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKV 299 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEE
Confidence 67788999999999886664 477899999999877221 11 111 22558999999999988876667888
Q ss_pred EEeCCCC
Q 018806 323 IHFASKP 329 (350)
Q Consensus 323 ~~~~~~~ 329 (350)
|++....
T Consensus 300 ~d~~~~~ 306 (331)
T 3u4y_A 300 FTISGKV 306 (331)
T ss_dssp EETTSCE
T ss_pred EEecCCc
Confidence 8876543
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=2.9e-18 Score=158.13 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=147.2
Q ss_pred EEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEec--CCCCCCceee
Q 018806 106 SWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAP--SYPGNAASVR 183 (350)
Q Consensus 106 ~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~--~~~~~~~~~~ 183 (350)
+|+|++.++++++.|++|.+||..+ ++....+..++. +..++|+|+|+++++++.+++|++||+ ....
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t--~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~------ 213 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDS--KKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT------ 213 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTT--CCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCC--ceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc------
Confidence 3789999999999999999999854 666566543443 899999999999999999999999999 4221
Q ss_pred cccccccceecCCCCCceEEeeeccCCCCCceeeEEECC----CCCeEEEEEeCCCeEEEEeCCCCCceeeeec------
Q 018806 184 SGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP----DGRYLASASYESSSFTIWDVAQGLGTPIRRG------ 253 (350)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp----~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~------ 253 (350)
+...+... ..+..++|+| ||+++++++..+++|.+||..+++.......
T Consensus 214 -------------------~~~~i~~g--~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 214 -------------------KVAEIKIG--IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp -------------------EEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS
T ss_pred -------------------EEEEEecC--CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccC
Confidence 12233322 4689999999 9999999986436999999999877654322
Q ss_pred ------CCCeEEEEEcCCCCEE-EEEecCCeEEEEeCCCCceec--cccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 254 ------FGGLSILKWSPTGDYF-FAAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 254 ------~~~v~~~~~sp~g~~l-~~~~~d~~v~iwd~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
...+..+.++|++..+ ++...++.|.+||+.+.+... ...+...+.+++|+|+|+++++++..+..+..|+
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 2268899999987665 566778999999998876532 3356667889999999999988876555677777
Q ss_pred eCCC
Q 018806 325 FASK 328 (350)
Q Consensus 325 ~~~~ 328 (350)
....
T Consensus 353 ~~tg 356 (543)
T 1nir_A 353 SKDR 356 (543)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 6654
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2.3e-17 Score=143.81 Aligned_cols=187 Identities=8% Similarity=0.042 Sum_probs=141.5
Q ss_pred eeEEEEecCCCEEEEEE--CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 102 LQGVSWHQHKHIVAFIS--GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s--~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
+.+++|+|+|+++++++ .++.|.+||... ++....+. .+...+..++|+|+|+.++++..++.+.+||.......
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~--~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGN--IKLKTAIQ-NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKIL 219 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTT--TEEEEEEC-CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCC--CceEEEec-CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEE
Confidence 68899999999888776 478899999853 55444442 35556889999999998888888999999998743322
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSI 259 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~ 259 (350)
..+... ..++ ...+..++|+|+|+++++++.+++.|.+||..+++......... ...
T Consensus 220 ~~~~~~---------------------~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~ 276 (353)
T 3vgz_A 220 SRKKLL---------------------DDGK-EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-SLA 276 (353)
T ss_dssp EEEECC---------------------CSSS-CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCC
T ss_pred EEEEcC---------------------CCCC-CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-Cce
Confidence 221110 1112 24678899999999888877665799999999887665444333 356
Q ss_pred EEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 260 LKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 260 ~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
++|+|+|++++++. .++.|.+||..+++..........+.+++|+|+|++|+++.
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEE
Confidence 99999999776655 68999999999998865555566789999999999888876
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=1.7e-18 Score=165.77 Aligned_cols=212 Identities=13% Similarity=0.130 Sum_probs=139.0
Q ss_pred CeeEEEEecCCCEEEEEECC---------CeEEEEEccCCCCCceeEec--CCCCCCeeEEEEeeCCCeEEEEecCCcEE
Q 018806 101 DLQGVSWHQHKHIVAFISGS---------TQVIVRDYEDSEGKDACILT--SDSQRDVKVLEWRPNGGRSLSVGCKGGIC 169 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d---------~~i~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~~v~ 169 (350)
.|.+++|||||++||+++.+ +.+.+||+.. ++. ..+. ..|...+..++|||||+.+++++. +.|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~--~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH--GDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS--CCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC--Cce-EeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 48999999999999999864 7888999964 332 2222 234556899999999888887765 8999
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC---------------
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES--------------- 234 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~--------------- 234 (350)
+||+..+... .+........ +.. ....|. ........+.+++|||||++|++++.++
T Consensus 138 ~~~~~~g~~~-~~~~~~~~~~--~~~-g~~~~v----~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~ 209 (723)
T 1xfd_A 138 YCAHVGKQAI-RVVSTGKEGV--IYN-GLSDWL----YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI 209 (723)
T ss_dssp EESSSSSCCE-EEECCCBTTT--EEE-EECCHH----HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS
T ss_pred EEECCCCceE-EEecCCCCCc--eEC-ccccee----EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC
Confidence 9999843322 2111100000 000 000000 0000002347899999999999887652
Q ss_pred ------------------CeEEEEeCCCCCc-eeeeec------CCCeEEEEEcCCCCEEEEEec----CCeEEEEeCCC
Q 018806 235 ------------------SSFTIWDVAQGLG-TPIRRG------FGGLSILKWSPTGDYFFAAKF----DGTFYLWETNT 285 (350)
Q Consensus 235 ------------------g~i~iwd~~~~~~-~~~~~~------~~~v~~~~~sp~g~~l~~~~~----d~~v~iwd~~~ 285 (350)
.+|++||+.+++. ..+..+ ...+..++|+|||++|++... +..|++||+.+
T Consensus 210 ~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp SCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred CCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 1799999998874 333332 456889999999998876653 35799999999
Q ss_pred Cceeccc--cCCCCe----EEEEEcCCCCEEEEE-ECCC------eEEEEEE
Q 018806 286 WTSEPWS--STSGFV----TGATWDPEGRMILLA-FAGS------LTLGSIH 324 (350)
Q Consensus 286 ~~~~~~~--~~~~~v----~~~~~s~~g~~l~~~-~~~~------~~~~~~~ 324 (350)
++...+. .+...+ ..++|+|||+.|++. ++.+ ..++.++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 9875432 233433 378999999988875 4332 3677776
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=2.1e-18 Score=164.69 Aligned_cols=210 Identities=16% Similarity=0.148 Sum_probs=143.4
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC--
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP-- 176 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~-- 176 (350)
...|.+++|||| +.++++ .++.+++||+.. ++. ..+ ..+...+.+++|+|||+.+++ +.++.|++|++...
T Consensus 81 ~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~--~~~-~~l-~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLA--RKV-TYL-FDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGE 153 (706)
T ss_dssp -CCCEEEEETTT-TEEEEE-ETTEEEEEETTT--TEE-EEE-ECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTS
T ss_pred ccCceeEEECCC-CeEEEE-ECCEEEEEECCC--Cce-EEc-cCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccc
Confidence 356999999999 666665 459999999953 433 233 245677999999999888777 57899999999851
Q ss_pred --CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-----------------------
Q 018806 177 --GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS----------------------- 231 (350)
Q Consensus 177 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~----------------------- 231 (350)
+....+...... .+..+. ...+.+ ...+.+++|||||++|++++
T Consensus 154 ~~g~~~~~~~~~~~---~~~~g~-------~~~~ee-~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 154 GMSRAIAVTIDGTE---TLVYGQ-------AVHQRE-FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp CCCCCEESCSCCBT---TEEESS-------CCGGGC-TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred cCCCcEEeccCCCC---CeEccc-------chhhhh-cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 222211111000 000000 001111 13468999999999999987
Q ss_pred ----------eCCCeEEEEeCCCCCceeee---ecCCCeEEEEEcCCCCEEEEEecCC-----eEEEEeCCCC-ceeccc
Q 018806 232 ----------YESSSFTIWDVAQGLGTPIR---RGFGGLSILKWSPTGDYFFAAKFDG-----TFYLWETNTW-TSEPWS 292 (350)
Q Consensus 232 ----------~d~g~i~iwd~~~~~~~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~-----~v~iwd~~~~-~~~~~~ 292 (350)
.+ +.|++||+.+++...+. .+...+.+++|+|||++|++++.++ .|++||+.++ +...+.
T Consensus 223 ~~y~~~g~~~~~-~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 223 LYYPMAGTPSHH-VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp ECCCBTTSCCCE-EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred eeCCCCCCCCCe-eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 23 48999999988765544 3456789999999999999887775 8999999998 443332
Q ss_pred --cCCC---CeEEEEEcC--CCCEEEEEE-CCCeEEEEEEeCC
Q 018806 293 --STSG---FVTGATWDP--EGRMILLAF-AGSLTLGSIHFAS 327 (350)
Q Consensus 293 --~~~~---~v~~~~~s~--~g~~l~~~~-~~~~~~~~~~~~~ 327 (350)
.+.. .+..++|+| ||++|+++. ++...+|.++...
T Consensus 302 ~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 302 VETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp EEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred EccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 2222 246789999 999888776 4557788877443
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=7.6e-17 Score=141.30 Aligned_cols=225 Identities=14% Similarity=0.168 Sum_probs=143.7
Q ss_pred ccCeeEEEEecCCCEEEEEECC----CeEEEEEccCCCCCceeEec-CCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEe
Q 018806 99 EVDLQGVSWHQHKHIVAFISGS----TQVIVRDYEDSEGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWA 172 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d----~~i~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd 172 (350)
...+..++|+|||++|++++.+ +.+.+|+++..++....... ..+......+++ +++.++++.. ++.+.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 3457789999999999998875 79999999754343222211 124456677777 7777777775 68999999
Q ss_pred cCCCCCCceeec----ccccc---------cceecCCCCCc-----------eEEeeec--------------------c
Q 018806 173 PSYPGNAASVRS----GAASF---------LGALSRGPGTR-----------WTLVDFL--------------------R 208 (350)
Q Consensus 173 ~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~-----------~~~~~~~--------------------~ 208 (350)
+...+....+.. ....+ ...+.++++++ +.++..- .
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 975443322211 00000 01233344333 2222110 1
Q ss_pred CCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee------cCCCeEEEEEcCCCCEEEEEecC--CeEEE
Q 018806 209 SQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR------GFGGLSILKWSPTGDYFFAAKFD--GTFYL 280 (350)
Q Consensus 209 ~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~------~~~~v~~~~~sp~g~~l~~~~~d--~~v~i 280 (350)
......+..++|+|||+++++++..++.|.+||+.++....+.. +......++|+|||++|+++..+ +.|.+
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 11124567899999999998887543699999998775433221 22446799999999999776654 89999
Q ss_pred EeCC--CCceec--cccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 281 WETN--TWTSEP--WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 281 wd~~--~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
|+++ +++... .......+..++|+|||++|++++..+..+..|++
T Consensus 287 ~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 287 FKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 9996 455422 12225578899999999999998844444444433
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=2.2e-17 Score=143.92 Aligned_cols=208 Identities=7% Similarity=-0.070 Sum_probs=151.6
Q ss_pred cCeeEEEEecCCCEEEEEEC-------CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEE
Q 018806 100 VDLQGVSWHQHKHIVAFISG-------STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIW 171 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~-------d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iw 171 (350)
..+..++|+|+|++|++++. ++.|.+||... ++....+. ....+..++|+|+|+.++++.. ++.|.+|
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAIH--NDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT--CCEEEEEE--ESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEEe--cCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 45889999999999988774 56899999854 55444443 2345789999999887777666 5999999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe-CCCeEEEEeCCCCCceee
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY-ESSSFTIWDVAQGLGTPI 250 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~g~i~iwd~~~~~~~~~ 250 (350)
|....+....+..... ..........+.+++|+|+|++++++.. +++.|.+||..+++....
T Consensus 117 d~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~ 179 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDR-----------------KRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA 179 (353)
T ss_dssp ETTTCCEEEEEESCCC-----------------CCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE
T ss_pred eCCCCeeEEEEecCCC-----------------ccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE
Confidence 9985443222211100 0000000113688999999998888773 236999999998877665
Q ss_pred ee-cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-----cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 251 RR-GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-----STSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 251 ~~-~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
.. +...+..++|+|+|++|++++.++.|.+||..+++..... .+...+..++|+|+|++|+++......++.|+
T Consensus 180 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 180 IQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp ECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred ecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 55 4556889999999999999999999999999998874322 24556788999999999988886667788887
Q ss_pred eCCC
Q 018806 325 FASK 328 (350)
Q Consensus 325 ~~~~ 328 (350)
....
T Consensus 260 ~~~~ 263 (353)
T 3vgz_A 260 TRNG 263 (353)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7543
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=2.2e-17 Score=142.82 Aligned_cols=220 Identities=10% Similarity=-0.032 Sum_probs=132.7
Q ss_pred eeEEEEecCCCEEEEE-ECCCeEEEEEccCCCCCceeEecCCC----CCCeeEEEEeeCCCeEEEEe------------c
Q 018806 102 LQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSEGKDACILTSDS----QRDVKVLEWRPNGGRSLSVG------------C 164 (350)
Q Consensus 102 V~~v~~sp~g~~la~~-s~d~~i~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~------------~ 164 (350)
+..++|+|+|++++++ ..++.|.+||+.. ++....+..++ ...+..++|+|+|+.++++. .
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVT--GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTT--CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCC--CCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 6789999999877554 4578999999854 55444443232 22678999999988887775 4
Q ss_pred CCcEEEEecCCCCCCceeecccccccceecCCCCCc--------eEEeeeccCC------CCCceeeEEECCCCCeEEEE
Q 018806 165 KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTR--------WTLVDFLRSQ------NGEQITALSWGPDGRYLASA 230 (350)
Q Consensus 165 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------~~~~v~~~~~sp~g~~l~~~ 230 (350)
++.|.+||+........+... .....+.++++++ +.+++.-.+. .......+.|+|+|+.++..
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred CceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 699999999744332222211 0111122222222 1111110000 00112333455555544433
Q ss_pred EeCCC-----------------------eEEEEeCCCCCcee--eeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC
Q 018806 231 SYESS-----------------------SFTIWDVAQGLGTP--IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 285 (350)
Q Consensus 231 ~~d~g-----------------------~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~ 285 (350)
+...+ .|.+||+.+++... ...+...+.+++|+|+|++++++ ++.|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 32211 24555555554321 11233456789999999999887 69999999999
Q ss_pred CceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 286 WTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 286 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
++..........+.+++|+|+|++|++++ .+..+..|++...
T Consensus 270 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~i~v~d~~~~ 311 (337)
T 1pby_B 270 NASIKRVPLPHSYYSVNVSTDGSTVWLGG-ALGDLAAYDAETL 311 (337)
T ss_dssp TEEEEEEECSSCCCEEEECTTSCEEEEES-BSSEEEEEETTTC
T ss_pred CcCcceecCCCceeeEEECCCCCEEEEEc-CCCcEEEEECcCC
Confidence 88755554556788999999999998874 3456667766543
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=3.9e-18 Score=162.80 Aligned_cols=204 Identities=16% Similarity=0.200 Sum_probs=142.1
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCC---CCCceeEecCCCCCC--------------eeEEEEeeCCCeEEEE
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS---EGKDACILTSDSQRD--------------VKVLEWRPNGGRSLSV 162 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~---~~~~~~~~~~~~~~~--------------v~~~~~sp~~~~l~~~ 162 (350)
..+.+++|||||++||++ .++.|++|++... .++. ..+...+... +.+++|+|||+.|+++
T Consensus 121 ~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~-~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA-IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC-EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred ccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc-EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 357889999999999985 7899999999640 0222 2222223222 5899999999999888
Q ss_pred ec---------------------------------CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccC
Q 018806 163 GC---------------------------------KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS 209 (350)
Q Consensus 163 ~~---------------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (350)
+. +..|++||+..+.. .. ......
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~----------------------~~~~~~ 255 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VY----------------------LQTGEP 255 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EE----------------------CCCCSC
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-Ee----------------------eccCCC
Confidence 73 35677777763211 00 000112
Q ss_pred CCCCceeeEEECCCCCeEEEEEeCC----CeEEEEeCCCC-Cceeeee--cCC---CeEEEEEcC--CCCEEEEEecCCe
Q 018806 210 QNGEQITALSWGPDGRYLASASYES----SSFTIWDVAQG-LGTPIRR--GFG---GLSILKWSP--TGDYFFAAKFDGT 277 (350)
Q Consensus 210 ~~~~~v~~~~~sp~g~~l~~~~~d~----g~i~iwd~~~~-~~~~~~~--~~~---~v~~~~~sp--~g~~l~~~~~d~~ 277 (350)
+ ...+.+++|+|||++|++++.+. ..|++||+.++ ....+.. +.. .+..++|+| ||+++++++.|+.
T Consensus 256 ~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 256 K-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp T-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred C-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 3 35789999999999999987762 28999999998 4444332 222 246789999 9999999988998
Q ss_pred EEEEeCC-CCc-eeccccCCCCeEE-EEEcCCCCEEEEEECCC----eEEEEEEeCCCC
Q 018806 278 FYLWETN-TWT-SEPWSSTSGFVTG-ATWDPEGRMILLAFAGS----LTLGSIHFASKP 329 (350)
Q Consensus 278 v~iwd~~-~~~-~~~~~~~~~~v~~-~~~s~~g~~l~~~~~~~----~~~~~~~~~~~~ 329 (350)
++||+++ +++ ...+..+...+.. ++|+|+|+.|++++..+ ..++.++.....
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 8888775 333 4556666667776 79999999998877443 588888876543
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=2.6e-17 Score=151.73 Aligned_cols=210 Identities=10% Similarity=0.034 Sum_probs=143.8
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEee----CCCeEEEEec-CCcEEEEecC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP----NGGRSLSVGC-KGGICIWAPS 174 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp----~~~~l~~~~~-d~~v~iwd~~ 174 (350)
..+.+++|+|||++|++++.|+.|.+||+...+++....+. +...+..++|+| +|+++++++. +++|.+||..
T Consensus 179 ~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 179 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp TTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred cccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 34899999999999999999999999999322355545543 456789999999 9888888775 7999999987
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee--eee
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP--IRR 252 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~--~~~ 252 (350)
..+....+...... .....-|....+.++.++|+++.++.+..++|+|.+||+.+.+... ...
T Consensus 257 t~~~~~~i~~~g~~---------------~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 257 TLEPKQIVSTRGMT---------------VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp TCCEEEEEECCEEC---------------SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred ccccceeecccCcc---------------cCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 54433332211000 0000012224789999999888777666555899999998865433 334
Q ss_pred cCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccc-----cCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEEe
Q 018806 253 GFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWS-----STSGFVTGATWDPE-GRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 253 ~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~-g~~l~~~~~~~~~~~~~~~ 325 (350)
+...+..++|+|+|+++++++ .+++|.+||++++++.... .|.+....+ ++|+ |+.++++..++..+..|+.
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 556788899999999876554 5889999999999875432 244433333 4787 4444444334445666665
Q ss_pred CC
Q 018806 326 AS 327 (350)
Q Consensus 326 ~~ 327 (350)
..
T Consensus 401 ~~ 402 (543)
T 1nir_A 401 DP 402 (543)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=8.9e-18 Score=166.94 Aligned_cols=181 Identities=10% Similarity=0.062 Sum_probs=147.6
Q ss_pred CeeEEEEe-cCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCC-CeeEEEEeeCCCeEEEEecCCcEE-EEecCCCC
Q 018806 101 DLQGVSWH-QHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQR-DVKVLEWRPNGGRSLSVGCKGGIC-IWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~s-p~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~d~~v~-iwd~~~~~ 177 (350)
.+.+++|| |||++||+++ ++.+.+|+... +. ...+ ..|.. .+..++|+ ||+.+++++.++.+. +|++....
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~--~~-~~~~-~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG--TY-VLKV-PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTS--SB-EEEC-SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCC--Cc-eEEc-cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 58999999 9999999887 78899999853 33 2333 35666 89999999 988888888777777 88876321
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGG 256 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~ 256 (350)
. ..+.++ ...+..++|+|||++|++++.+ +.|++||+.+++...+. .+.+.
T Consensus 371 -~-------------------------~~l~~~-~~~~~~~~~SpDG~~la~~~~~-~~v~~~d~~tg~~~~~~~~~~~~ 422 (1045)
T 1k32_A 371 -A-------------------------EKFEEN-LGNVFAMGVDRNGKFAVVANDR-FEIMTVDLETGKPTVIERSREAM 422 (1045)
T ss_dssp -E-------------------------EECCCC-CCSEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEECSSSC
T ss_pred -c-------------------------eEecCC-ccceeeeEECCCCCEEEEECCC-CeEEEEECCCCceEEeccCCCCC
Confidence 1 112333 3688999999999999999988 69999999999877666 67788
Q ss_pred eEEEEEcCCCCEEEEEecCC----------eEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEEC
Q 018806 257 LSILKWSPTGDYFFAAKFDG----------TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA 315 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d~----------~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 315 (350)
+..++|+|||++|++++.++ .|++||+.+++...+..+...+..++|+|||++|+++++
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 89999999999998887644 899999999887777788888999999999999998874
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=3e-17 Score=143.02 Aligned_cols=209 Identities=13% Similarity=0.106 Sum_probs=134.1
Q ss_pred CeeEEEEecCCCEEEEEEC---CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCC
Q 018806 101 DLQGVSWHQHKHIVAFISG---STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYP 176 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~---d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~ 176 (350)
.+..++|+|||+ |++++. ++.|.+|+++....+.+... ..+...+..++|+|+|+.+++++. ++.+.+|++...
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV-VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE-EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee-ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 467899999999 555554 68999999964222222222 235677899999999988888884 699999999743
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCC-CCCceeee---e
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVA-QGLGTPIR---R 252 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~-~~~~~~~~---~ 252 (350)
+....+..... ...+. .... ....+.+++|+|+|+ ++++...++.|.+|++. +++..... .
T Consensus 119 g~~~~~~~~~~--------~~~~p-----~~~~-~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~ 183 (347)
T 3hfq_A 119 GALTLTDTVQH--------SGHGP-----RPEQ-DGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTM 183 (347)
T ss_dssp SCEEEEEEEEC--------CCCCS-----STTC-SSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred CCeeecceeec--------CCCCC-----Cccc-cCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEc
Confidence 33222111000 00000 0000 113588899999999 55554433699999998 45433221 1
Q ss_pred -cCCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCCC--Cceec---cccC------CCCeEEEEEcCCCCEEEEEECCCeE
Q 018806 253 -GFGGLSILKWSPTGDYFFAA-KFDGTFYLWETNT--WTSEP---WSST------SGFVTGATWDPEGRMILLAFAGSLT 319 (350)
Q Consensus 253 -~~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~~--~~~~~---~~~~------~~~v~~~~~s~~g~~l~~~~~~~~~ 319 (350)
....+..++|+|||++++++ ..++.|++|+++. ++... +... ...+..++|+|||++|+++...+..
T Consensus 184 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 184 EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE
T ss_pred CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE
Confidence 22367889999999977654 5678999999874 54321 1111 1458899999999999777644445
Q ss_pred EEEEEeC
Q 018806 320 LGSIHFA 326 (350)
Q Consensus 320 ~~~~~~~ 326 (350)
+..|++.
T Consensus 264 v~v~~~~ 270 (347)
T 3hfq_A 264 LAVFAVT 270 (347)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 5555553
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.78 E-value=1.2e-17 Score=166.08 Aligned_cols=194 Identities=12% Similarity=0.062 Sum_probs=150.2
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC----------CCCCeeEEEEe-eCCCeEEEEecCCcEE
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD----------SQRDVKVLEWR-PNGGRSLSVGCKGGIC 169 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~----------~~~~v~~~~~s-p~~~~l~~~~~d~~v~ 169 (350)
.+..++|+|||++|+++ .++.|.+|++. ...+..+... |...+.+++|+ |||+.+++++ ++.++
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~---~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~ 320 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPD---TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAF 320 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTT---TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEE
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCC---ceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEE
Confidence 46778999999999987 58899999983 2223322210 23469999999 9988787766 88999
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEE-EEeCCCCCce
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFT-IWDVAQGLGT 248 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~-iwd~~~~~~~ 248 (350)
+|++.... . ..+..+....+..++|+ ||+.|++++.+ +.+. +||+.+++..
T Consensus 321 ~~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~s-dg~~l~~~s~~-~~l~~~~d~~~~~~~ 372 (1045)
T 1k32_A 321 IQDVSGTY-V-------------------------LKVPEPLRIRYVRRGGD-TKVAFIHGTRE-GDFLGIYDYRTGKAE 372 (1045)
T ss_dssp EECTTSSB-E-------------------------EECSCCSCEEEEEECSS-SEEEEEEEETT-EEEEEEEETTTCCEE
T ss_pred EEcCCCCc-e-------------------------EEccCCCcceEEeeeEc-CCCeEEEEECC-CceEEEEECCCCCce
Confidence 99987321 1 11333432278999999 99999999887 5899 9999988766
Q ss_pred eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECC---------Ce
Q 018806 249 PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAG---------SL 318 (350)
Q Consensus 249 ~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~---------~~ 318 (350)
.+..+...+..++|+|||++|++++.++.|++||+.+++...+. .|...+.+++|||||++|++++.. ..
T Consensus 373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCC
Confidence 66666688999999999999999999999999999999886655 788889999999999999887632 24
Q ss_pred EEEEEEeCC
Q 018806 319 TLGSIHFAS 327 (350)
Q Consensus 319 ~~~~~~~~~ 327 (350)
.++.|++..
T Consensus 453 ~i~l~d~~~ 461 (1045)
T 1k32_A 453 AIHVYDMEG 461 (1045)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 666776654
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=2.4e-18 Score=164.62 Aligned_cols=188 Identities=18% Similarity=0.222 Sum_probs=134.9
Q ss_pred EEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCC---CeeEEEEeeCCCeEEEEec---------CCcEEEE
Q 018806 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQR---DVKVLEWRPNGGRSLSVGC---------KGGICIW 171 (350)
Q Consensus 104 ~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~---------d~~v~iw 171 (350)
+++|+|+|+++++ +.|+.|++||+.. ++....+ ..+.. .+.+++|||||+.+++++. ++.+++|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIET--GQSYTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSS--CCEEEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCC--CcEEEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 6799999965554 5799999999964 4433333 23322 4899999999998888776 6899999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR 251 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~ 251 (350)
|+..+..... ..+ ...+..++|||||+.|+++. + +.|++||+.+++...+.
T Consensus 96 d~~~g~~~~~-----------------------~~l----~~~~~~~~~SPDG~~la~~~-~-~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 96 DLSNGEFVRG-----------------------NEL----PRPIQYLCWSPVGSKLAYVY-Q-NNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp ETTTTEECCS-----------------------SCC----CSSBCCEEECSSTTCEEEEE-T-TEEEEESSTTSCCEECC
T ss_pred ECCCCccccc-----------------------eec----CcccccceECCCCCEEEEEE-C-CeEEEEeCCCCCcEEEe
Confidence 9974322000 001 13678899999999999985 5 49999999988765543
Q ss_pred e--cCCCe-----------------EEEEEcCCCCEEEEEecCC----------------------------------eE
Q 018806 252 R--GFGGL-----------------SILKWSPTGDYFFAAKFDG----------------------------------TF 278 (350)
Q Consensus 252 ~--~~~~v-----------------~~~~~sp~g~~l~~~~~d~----------------------------------~v 278 (350)
. +...+ .+++|||||++|++++.|. .|
T Consensus 147 ~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 147 FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 2 11212 4899999999999887652 78
Q ss_pred EEEeCCCCcee---c------cccCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEE
Q 018806 279 YLWETNTWTSE---P------WSSTSGFVTGATWDPEGRMILLAFA---GSLTLGSIH 324 (350)
Q Consensus 279 ~iwd~~~~~~~---~------~~~~~~~v~~~~~s~~g~~l~~~~~---~~~~~~~~~ 324 (350)
++||+.+++.. . +..+...+.+++||||++++++..+ +...++.++
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 99999987642 2 3357778999999999887766442 224577777
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=5.2e-18 Score=162.29 Aligned_cols=206 Identities=15% Similarity=0.182 Sum_probs=138.7
Q ss_pred CeeEEEEecCCCEEEEEEC---------CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEE
Q 018806 101 DLQGVSWHQHKHIVAFISG---------STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 171 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iw 171 (350)
.+.+++|||||++||+++. ++.|++||+.. ++..... .....+..++|||||+.++++ .++.|++|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~--~l~~~~~~~~~SPDG~~la~~-~~~~i~~~ 135 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGN--ELPRPIQYLCWSPVGSKLAYV-YQNNIYLK 135 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSS--CCCSSBCCEEECSSTTCEEEE-ETTEEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC--Cccccce--ecCcccccceECCCCCEEEEE-ECCeEEEE
Confidence 4889999999999999876 78999999864 3321001 112468999999998888776 57899999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCC--------CCceeeEEECCCCCeEEEEEeCCC--------
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN--------GEQITALSWGPDGRYLASASYESS-------- 235 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~sp~g~~l~~~~~d~g-------- 235 (350)
++..+........+.. . ..+.++. .....+++|||||++|++++.+++
T Consensus 136 ~~~~g~~~~l~~~~~~------------~----~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 136 QRPGDPPFQITFNGRE------------N----KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp SSTTSCCEECCCCCBT------------T----TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred eCCCCCcEEEecCCCc------------C----CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 9974433211111100 0 0011211 012358999999999999876521
Q ss_pred -------------------------eEEEEeCCCCCce---ee------eecCCCeEEEEEcCCCCEEEEEecC----Ce
Q 018806 236 -------------------------SFTIWDVAQGLGT---PI------RRGFGGLSILKWSPTGDYFFAAKFD----GT 277 (350)
Q Consensus 236 -------------------------~i~iwd~~~~~~~---~~------~~~~~~v~~~~~sp~g~~l~~~~~d----~~ 277 (350)
+|++||+.+++.. .+ ..+...+..++|+||++++++.... ..
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~ 279 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSV 279 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEE
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEE
Confidence 7889999987642 22 2356678999999998877664432 25
Q ss_pred EEEEe----CCCCceeccc-----cCCCCeE-----EEEEcCCCCEEEEE-E--CCCeEEEEEEeCC
Q 018806 278 FYLWE----TNTWTSEPWS-----STSGFVT-----GATWDPEGRMILLA-F--AGSLTLGSIHFAS 327 (350)
Q Consensus 278 v~iwd----~~~~~~~~~~-----~~~~~v~-----~~~~s~~g~~l~~~-~--~~~~~~~~~~~~~ 327 (350)
|++|| ..+++...+. .+...+. .++|+|||+.|++. + ++...++.+++..
T Consensus 280 l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 280 LSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp EEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred EEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 88999 8887775544 4566666 88999999977663 3 3345677766544
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=1.8e-16 Score=137.79 Aligned_cols=194 Identities=12% Similarity=0.027 Sum_probs=135.9
Q ss_pred CeeEEEEecCCCEEEEE-ECCCeEEEEEccCCCCCceeEecCCC-----CCCeeEEEEeeCCCeEEEEecC---------
Q 018806 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSEGKDACILTSDS-----QRDVKVLEWRPNGGRSLSVGCK--------- 165 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~-s~d~~i~iw~~~~~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~l~~~~~d--------- 165 (350)
.+..++|+|+|++++++ ..++.|.+||+.. ++....+...+ ...+..++|+|+|+.+++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT--CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 121 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC--CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccc
Confidence 36789999999876654 4689999999854 54444443232 2347899999999888887755
Q ss_pred ---CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 166 ---GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 166 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
+.|.+||+........+ ..+..+ ..+.+++|+|+|+ ++++ + +.|.+||.
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~----------------------~~~~~~--~~~~~~~~s~dg~-l~~~--~-~~i~~~d~ 173 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPV----------------------RTFPMP--RQVYLMRAADDGS-LYVA--G-PDIYKMDV 173 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCS----------------------EEEECC--SSCCCEEECTTSC-EEEE--S-SSEEEECT
T ss_pred cCCCeEEEEECCCcccccee----------------------eeccCC--CcccceeECCCCc-EEEc--c-CcEEEEeC
Confidence 89999999742211111 111222 3688999999999 5553 3 36999999
Q ss_pred CCCCceeeeecC--------------------------------------------------------------------
Q 018806 243 AQGLGTPIRRGF-------------------------------------------------------------------- 254 (350)
Q Consensus 243 ~~~~~~~~~~~~-------------------------------------------------------------------- 254 (350)
.+++........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
T 1jmx_B 174 KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADL 253 (349)
T ss_dssp TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccC
Confidence 887654322111
Q ss_pred -CCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 255 -GGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 255 -~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
..+..++|+| +|++++++ ++.|++||+++++..........+.+++|+|+|++|++++ .+..+..|+...
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~v~v~d~~~ 325 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG-TFNDLAVFNPDT 325 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES-BSSEEEEEETTT
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEec-CCCeEEEEeccc
Confidence 1345677889 99999888 8899999999988755444455678999999999998864 335666666644
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=1.1e-16 Score=153.49 Aligned_cols=206 Identities=14% Similarity=0.181 Sum_probs=138.6
Q ss_pred eeEEEEecCCCEEEEEECC---------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEe
Q 018806 102 LQGVSWHQHKHIVAFISGS---------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWA 172 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd 172 (350)
...++|||||++|++++.+ +.+.+||+.+ ++. ..+ ..+...+..++|||||+.++++ .++.|++|+
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~-~~l-~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~ 138 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK--RQL-ITE-ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKI 138 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEE-CCS-SCCCTTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC--CcE-EEc-ccCCCcceeeEECCCCCEEEEE-ECCeEEEEE
Confidence 3568999999999998876 5667999864 432 223 3567789999999999888776 678999999
Q ss_pred cCCCCCCceeec-ccccccceecCCCCCceEEeeeccCCC--------CCceeeEEECCCCCeEEEEEeCCC--------
Q 018806 173 PSYPGNAASVRS-GAASFLGALSRGPGTRWTLVDFLRSQN--------GEQITALSWGPDGRYLASASYESS-------- 235 (350)
Q Consensus 173 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~sp~g~~l~~~~~d~g-------- 235 (350)
+..+.. ..+.. +.. . ..+.++. .+....+.|||||++|++.+.|.+
T Consensus 139 ~~~~~~-~~lt~~g~~------------~----~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 139 EPNLPS-YRITWTGKE------------D----IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp STTSCC-EECCSCCBT------------T----TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred CCCCce-EEEcCCCCc------------c----ceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEE
Confidence 874432 22211 100 0 0011111 023356899999999998764422
Q ss_pred ---------------------------eEEEEeCCC---C---Cceeeee------cCCCeEEEEEcCCCCEEEEEec--
Q 018806 236 ---------------------------SFTIWDVAQ---G---LGTPIRR------GFGGLSILKWSPTGDYFFAAKF-- 274 (350)
Q Consensus 236 ---------------------------~i~iwd~~~---~---~~~~~~~------~~~~v~~~~~sp~g~~l~~~~~-- 274 (350)
+|++||+.+ + +...+.. +...+..++|+|||+.++....
T Consensus 202 ~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~ 281 (740)
T 4a5s_A 202 FYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI 281 (740)
T ss_dssp ECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS
T ss_pred eecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC
Confidence 588899988 7 3334432 5567889999999997765533
Q ss_pred --CCeEEEEeCCCCc----e---ecc--ccCCCCeE-----EEEEcCCCCEEE-EEE--CCCeEEEEEEeCCCC
Q 018806 275 --DGTFYLWETNTWT----S---EPW--SSTSGFVT-----GATWDPEGRMIL-LAF--AGSLTLGSIHFASKP 329 (350)
Q Consensus 275 --d~~v~iwd~~~~~----~---~~~--~~~~~~v~-----~~~~s~~g~~l~-~~~--~~~~~~~~~~~~~~~ 329 (350)
+..|++||+.+++ + ..+ ..+...+. .++|+|||+.|+ ..+ ++...++.++.....
T Consensus 282 ~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 282 QNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp TTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 2379999999987 3 222 33555544 789999999887 665 344677777766543
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=2.4e-16 Score=138.39 Aligned_cols=203 Identities=10% Similarity=0.072 Sum_probs=134.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCe-EEEEe--------------cC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGR-SLSVG--------------CK 165 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~--------------~d 165 (350)
.+..++|+|+|++|++++.+ .|.+|+++. +++..........+....++|+|+|+. +++++ .+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKS-PTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECC-CCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 47789999999999998888 899999861 244332221111133667899999875 33332 47
Q ss_pred CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCC-C
Q 018806 166 GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVA-Q 244 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~-~ 244 (350)
+.+.+|++...+..... ...+.......+.+++|+|||++|+++...++.|++||+. +
T Consensus 119 g~v~v~~~~~~g~~~~~---------------------~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKN---------------------VQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp CEEEEEEECTTCCEEEE---------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEEccCCCCcCcce---------------------EeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC
Confidence 89999999743321110 1111111125789999999999988776533599999998 6
Q ss_pred CCceee--ee---cCCCeEEEEEcCCCCEEEEEec-CCeEEEEeCC--CCcee----c---ccc----CCC------CeE
Q 018806 245 GLGTPI--RR---GFGGLSILKWSPTGDYFFAAKF-DGTFYLWETN--TWTSE----P---WSS----TSG------FVT 299 (350)
Q Consensus 245 ~~~~~~--~~---~~~~v~~~~~sp~g~~l~~~~~-d~~v~iwd~~--~~~~~----~---~~~----~~~------~v~ 299 (350)
++...+ .. +...+..++|+|||++|++++. ++.|.+|+++ +++.. . +.. +.. .+.
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 765332 11 2456899999999999987765 6899999765 45532 1 111 121 478
Q ss_pred EEE-EcCCCCEEEEEECCCe-----EEEEEEeC
Q 018806 300 GAT-WDPEGRMILLAFAGSL-----TLGSIHFA 326 (350)
Q Consensus 300 ~~~-~s~~g~~l~~~~~~~~-----~~~~~~~~ 326 (350)
.++ |+|||++|+++..+.. .+..|++.
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 999 9999999987763222 45555553
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=4.3e-17 Score=156.38 Aligned_cols=194 Identities=17% Similarity=0.223 Sum_probs=137.5
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCC-----CeeEEEEeeCCCeEEEEecC---------Cc
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQR-----DVKVLEWRPNGGRSLSVGCK---------GG 167 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~~d---------~~ 167 (350)
..+++|+|||++|+++ |+.|++|++.+ ++....+ ..|.. ....++|||||+.+++++.+ +.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEY--GNSSVFL-ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTT--CCEEEEE-CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCC--CceEEEE-echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 5679999999999885 99999999964 4443333 34432 22458999999988887765 56
Q ss_pred EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc
Q 018806 168 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG 247 (350)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~ 247 (350)
+.+||+..+.. . .+..+. ..+..++|||||+.|+++. + +.|++||+.++..
T Consensus 94 ~~~~d~~~~~~-~-------------------------~l~~~~-~~~~~~~~SPdG~~la~~~-~-~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 94 YDIYDLNKRQL-I-------------------------TEERIP-NNTQWVTWSPVGHKLAYVW-N-NDIYVKIEPNLPS 144 (740)
T ss_dssp EEEEETTTTEE-C-------------------------CSSCCC-TTEEEEEECSSTTCEEEEE-T-TEEEEESSTTSCC
T ss_pred EEEEECCCCcE-E-------------------------EcccCC-CcceeeEECCCCCEEEEEE-C-CeEEEEECCCCce
Confidence 67999984321 1 133333 5789999999999999985 5 4999999998876
Q ss_pred eeeeec--CCCe-----------------EEEEEcCCCCEEEEEecCC--------------------------------
Q 018806 248 TPIRRG--FGGL-----------------SILKWSPTGDYFFAAKFDG-------------------------------- 276 (350)
Q Consensus 248 ~~~~~~--~~~v-----------------~~~~~sp~g~~l~~~~~d~-------------------------------- 276 (350)
..+... ...+ ..+.|||||++||..+.|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 554321 1112 3489999999998875321
Q ss_pred ----eEEEEeCCC---C---ceeccc------cCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEEeCCCC
Q 018806 277 ----TFYLWETNT---W---TSEPWS------STSGFVTGATWDPEGRMILLAFA---GSLTLGSIHFASKP 329 (350)
Q Consensus 277 ----~v~iwd~~~---~---~~~~~~------~~~~~v~~~~~s~~g~~l~~~~~---~~~~~~~~~~~~~~ 329 (350)
.|++||+.+ + +...+. .+...+..++|+|||+.++.... +...++.++.....
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 588999998 7 444443 37778999999999997776542 23467777765443
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=4e-17 Score=152.34 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=135.4
Q ss_pred CeeEEEEecCCCEEEEEEC---CCeEEEEEccCC-CCCceeEecCCCCCCeeEEEEeeCCCeEEE-EecCCcEEEEecCC
Q 018806 101 DLQGVSWHQHKHIVAFISG---STQVIVRDYEDS-EGKDACILTSDSQRDVKVLEWRPNGGRSLS-VGCKGGICIWAPSY 175 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~---d~~i~iw~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~iwd~~~ 175 (350)
.|.+++|||| +++++++. +...+||.++.. .+... .+. ....+...+|+|+|+.++. ++.++.+.+||+..
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 5889999999 77777665 456678777541 23322 332 2234557799999876544 44456677999873
Q ss_pred CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC---CeEEEEeCCCCCceeeee
Q 018806 176 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES---SSFTIWDVAQGLGTPIRR 252 (350)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~---g~i~iwd~~~~~~~~~~~ 252 (350)
+. ... +..+. . .+++|||||++|++++.+. +.|++||+.+++...+..
T Consensus 142 g~-~~~-------------------------l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 142 GG-LRE-------------------------LARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp TE-EEE-------------------------EEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred Cc-EEE-------------------------eecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 32 111 11122 2 7899999999999877651 279999999998887877
Q ss_pred cCCCeEEEEEcCCCCEEEEEecCC--eEEEEeCCCCceeccccCCCCeEEEE--------EcCCCCEEEEEE-CCCeEEE
Q 018806 253 GFGGLSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWSSTSGFVTGAT--------WDPEGRMILLAF-AGSLTLG 321 (350)
Q Consensus 253 ~~~~v~~~~~sp~g~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~v~~~~--------~s~~g~~l~~~~-~~~~~~~ 321 (350)
+.+.+..++|||||++|+++..++ .|++||+++++...+..+...+..++ |+|||+.++++. ++...+|
T Consensus 193 ~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~ 272 (582)
T 3o4h_A 193 GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVF 272 (582)
T ss_dssp SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEE
T ss_pred CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEE
Confidence 888899999999999999888888 89999999988875556666666677 999996666665 4434444
Q ss_pred EE
Q 018806 322 SI 323 (350)
Q Consensus 322 ~~ 323 (350)
.+
T Consensus 273 ~~ 274 (582)
T 3o4h_A 273 ID 274 (582)
T ss_dssp ET
T ss_pred EE
Confidence 43
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=3.2e-16 Score=138.56 Aligned_cols=195 Identities=12% Similarity=0.024 Sum_probs=138.4
Q ss_pred EEEEecCCCEEEEEEC-CCe--EEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 104 GVSWHQHKHIVAFISG-STQ--VIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 104 ~v~~sp~g~~la~~s~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
..+|||||++|++++. ++. |.+||+. +++. ..+..++...+..+.|+|||+.|+++..++.+++||+......
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~--~g~~-~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~- 115 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLN--TQVA-TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN- 115 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETT--TCEE-EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE-
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCC--CCce-EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce-
Confidence 3689999999999887 674 6666664 3443 3444456556667899999999999988899999999844321
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeE--EECCCCCeEEEEE----------------------eCCCe
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL--SWGPDGRYLASAS----------------------YESSS 236 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~sp~g~~l~~~~----------------------~d~g~ 236 (350)
.+ ...+. ..+... .++|+++.++... .+ +.
T Consensus 116 ~~------------------------~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 169 (388)
T 3pe7_A 116 VV------------------------YQVPA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC-CR 169 (388)
T ss_dssp EE------------------------EECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC-EE
T ss_pred ee------------------------eechh-hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc-ce
Confidence 11 11111 233333 3489998887432 23 48
Q ss_pred EEEEeCCCCCceeeeecCCCeEEEEEcC-CCCEEEEEecC------CeEEEEeCCCCceeccccCC--CCeEEEEEcCCC
Q 018806 237 FTIWDVAQGLGTPIRRGFGGLSILKWSP-TGDYFFAAKFD------GTFYLWETNTWTSEPWSSTS--GFVTGATWDPEG 307 (350)
Q Consensus 237 i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~--~~v~~~~~s~~g 307 (350)
|++||+.+++...+..+...+..++|+| ||+.|+....+ ..|+++|..+++...+..+. ..+..++|+|||
T Consensus 170 l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg 249 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDG 249 (388)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTS
T ss_pred EEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCC
Confidence 9999999998877777778899999999 99999877653 37889998887776665554 357889999999
Q ss_pred CEEEEEE-C-CC--eEEEEEEeCCC
Q 018806 308 RMILLAF-A-GS--LTLGSIHFASK 328 (350)
Q Consensus 308 ~~l~~~~-~-~~--~~~~~~~~~~~ 328 (350)
+.|++.+ . +. ..++.|++...
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 250 SALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp SCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CEEEEEecCCCCCcceEEEEecCCC
Confidence 9887655 2 22 23777776544
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=5.6e-16 Score=134.69 Aligned_cols=157 Identities=12% Similarity=0.110 Sum_probs=112.1
Q ss_pred EEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCcee
Q 018806 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASV 182 (350)
Q Consensus 104 ~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~ 182 (350)
.++++++++++++++.++.|.+||... ++....+..+....+..++|+|+|+.+++++. ++.|.+||+...+....+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTT--TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCC--CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 456778899999999999999999854 55444443233236889999999877766654 699999998743322111
Q ss_pred ecccccccceecCCCCCceEEeeeccCCC----CCceeeEEECCCCCeEEEEEeC-----------CCeEEEEeCCCCCc
Q 018806 183 RSGAASFLGALSRGPGTRWTLVDFLRSQN----GEQITALSWGPDGRYLASASYE-----------SSSFTIWDVAQGLG 247 (350)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~g~~l~~~~~d-----------~g~i~iwd~~~~~~ 247 (350)
.. .+. ...+..++|+|+|++|++++.+ .+.|.+||+.+++.
T Consensus 82 ~~------------------------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 82 NL------------------------SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp ES------------------------CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred Ec------------------------ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 10 110 1247889999999999988854 35999999988543
Q ss_pred ---eeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee
Q 018806 248 ---TPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 248 ---~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
.....+...+.+++|+|+|+ +++++ +.|++||..+++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 138 AKPVRTFPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYT 179 (349)
T ss_dssp BCCSEEEECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEE
T ss_pred cceeeeccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCcee
Confidence 23334555788999999999 65543 44999999988763
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=6.9e-16 Score=135.51 Aligned_cols=203 Identities=9% Similarity=0.011 Sum_probs=134.0
Q ss_pred eeEEEEecCCCE--EEEEE-------------CCCeEEEEEccCCCCCceeEec---CCCCCCeeEEEEeeCCCeEEEEe
Q 018806 102 LQGVSWHQHKHI--VAFIS-------------GSTQVIVRDYEDSEGKDACILT---SDSQRDVKVLEWRPNGGRSLSVG 163 (350)
Q Consensus 102 V~~v~~sp~g~~--la~~s-------------~d~~i~iw~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~ 163 (350)
+..++|+|+|++ +++++ .++.+.+|+++. ++.....+. ..+...+.+++|+|||+.++++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE-TGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT-TCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC-CCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 445789999994 44542 689999999963 233322221 13456799999999988777666
Q ss_pred c-CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCC-CCCceeeEEECCCCCeEEEEEeCCCeEEEEe
Q 018806 164 C-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ-NGEQITALSWGPDGRYLASASYESSSFTIWD 241 (350)
Q Consensus 164 ~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd 241 (350)
. ++.|++|++...+.... ...+... +...+..++|+|||+++++++..+++|.+|+
T Consensus 164 ~~~~~v~~~~~~~~g~~~~----------------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVEL----------------------VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TTTTEEEEEEECTTSCEEE----------------------EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEEECCCCCEEE----------------------eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 5 58999999972111111 1112211 1246899999999999988876546999997
Q ss_pred CC--CCCcee----eeec-------CC------CeEEEE-EcCCCCEEEEEecC-C-----eEEEEeCC-CCceec----
Q 018806 242 VA--QGLGTP----IRRG-------FG------GLSILK-WSPTGDYFFAAKFD-G-----TFYLWETN-TWTSEP---- 290 (350)
Q Consensus 242 ~~--~~~~~~----~~~~-------~~------~v~~~~-~sp~g~~l~~~~~d-~-----~v~iwd~~-~~~~~~---- 290 (350)
++ +++... +... .. .+..++ |+|||++|+++..+ + .|.+|+++ +++...
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~ 301 (365)
T 1jof_A 222 IDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL 301 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE
T ss_pred EeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee
Confidence 65 454321 1111 11 478899 99999998776543 3 89999996 566543
Q ss_pred cccCCCCeEEEEEcC---CCCEEEEEECCCeEEEEEEeCC
Q 018806 291 WSSTSGFVTGATWDP---EGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 291 ~~~~~~~v~~~~~s~---~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
...+...+..++|+| ||++|++++.++..+..|++..
T Consensus 302 ~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 302 SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred eecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 222444567889999 8999998875444455555443
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.72 E-value=1.9e-15 Score=130.61 Aligned_cols=151 Identities=11% Similarity=0.117 Sum_probs=109.9
Q ss_pred CEEEEEECCCeEEEEEccCCCCCceeEecCCCCC-CeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccc
Q 018806 112 HIVAFISGSTQVIVRDYEDSEGKDACILTSDSQR-DVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASF 189 (350)
Q Consensus 112 ~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~ 189 (350)
++|++++.++.|.+||... ++....+..++.. .+..++|+|+|+.+++++. ++.|.+||+...+....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~--- 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK--MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST--- 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTT--TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB---
T ss_pred cEEEEcCCCCeEEEEECCC--CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC---
Confidence 4788999999999999854 5555555333322 4889999999887776666 5899999997443322211110
Q ss_pred cceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE------------eCCCeEEEEeCCCCCceeeeecCCCe
Q 018806 190 LGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS------------YESSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~------------~d~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
...+ ...+..++|+|+|++|+++. .+ +.|.+||+.+++..........+
T Consensus 77 -----------------~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~-~~i~v~d~~~~~~~~~~~~~~~~ 137 (337)
T 1pby_B 77 -----------------PEER-VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP-TRVALYDAETLSRRKAFEAPRQI 137 (337)
T ss_dssp -----------------TTEE-EECTTCEEECTTSSEEEEEEEEEEECSSCEEECC-CEEEEEETTTTEEEEEEECCSSC
T ss_pred -----------------cccc-cccccceEECCCCCEEEEEecccccccccccccC-ceEEEEECCCCcEEEEEeCCCCc
Confidence 0000 12577899999999998886 45 59999999988766555555678
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
..++|+|+|++|+++ ++.|++||+.+++.
T Consensus 138 ~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~ 166 (337)
T 1pby_B 138 TMLAWARDGSKLYGL--GRDLHVMDPEAGTL 166 (337)
T ss_dssp CCEEECTTSSCEEEE--SSSEEEEETTTTEE
T ss_pred ceeEECCCCCEEEEe--CCeEEEEECCCCcE
Confidence 889999999988877 68899999988765
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=6e-15 Score=129.18 Aligned_cols=183 Identities=12% Similarity=0.096 Sum_probs=125.0
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCC----C-ce-----eEecCCCCCCeeEEEEeeCCCeEEEEec-CCcE
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEG----K-DA-----CILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGI 168 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~----~-~~-----~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v 168 (350)
.+.+++|+|+|++|++++ .++.+.+|+++...+ + .. ......+......++|+|+|+.++++.. ++.|
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 468899999999777665 488999999975443 2 11 1222345567889999999888877774 7999
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-CCeEEEEeCC--CC
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-SSSFTIWDVA--QG 245 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~g~i~iwd~~--~~ 245 (350)
.+|++..+ ....+.. ......+. .....++|+|||++|+++..+ ++.|.+|++. ++
T Consensus 236 ~v~~~~~g-~~~~~~~-------------------~~~~~~~~-~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 236 IAFRYADG-MLDEIQT-------------------VAADTVNA-QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG 294 (361)
T ss_dssp EEEEEETT-EEEEEEE-------------------EESCSSCC-CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC
T ss_pred EEEEecCC-ceEEeEE-------------------EecCCCCC-CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC
Confidence 99999722 1111110 11122222 356899999999999877765 4699999986 44
Q ss_pred Cceeee--ecCCCeEEEEEcCCCCEEEEEe-cCCeEEEE--eCCCCceeccc--cCCCCeEEEEEc
Q 018806 246 LGTPIR--RGFGGLSILKWSPTGDYFFAAK-FDGTFYLW--ETNTWTSEPWS--STSGFVTGATWD 304 (350)
Q Consensus 246 ~~~~~~--~~~~~v~~~~~sp~g~~l~~~~-~d~~v~iw--d~~~~~~~~~~--~~~~~v~~~~~s 304 (350)
+...+. .....+..++|+|+|++|++++ .++.|.+| |.++++...+. .+...+.+++|.
T Consensus 295 ~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 295 TLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred cEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 433222 2245678999999999998887 57899996 55577764433 234567888885
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=3.5e-15 Score=141.29 Aligned_cols=202 Identities=10% Similarity=0.042 Sum_probs=135.0
Q ss_pred CeeEEEEecCCCEEEEE--ECCCeEEEEEccCCCCCceeEecCCCCCCee---------EEEEe--eCCCe-EEEEec-C
Q 018806 101 DLQGVSWHQHKHIVAFI--SGSTQVIVRDYEDSEGKDACILTSDSQRDVK---------VLEWR--PNGGR-SLSVGC-K 165 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~--s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--p~~~~-l~~~~~-d 165 (350)
.|..++|++++-+++.. +.++...||... . +.....+. .+...+. ...|+ |||+. ++++.. +
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRR-A-DGAEESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEEC-T-TSCEEESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEEC-C-CCCcceeC-CCCccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 48899999876555555 447889999973 2 33334443 4555666 67777 99888 665554 3
Q ss_pred CcEEEEecCC-C-CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC---------
Q 018806 166 GGICIWAPSY-P-GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES--------- 234 (350)
Q Consensus 166 ~~v~iwd~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~--------- 234 (350)
..|.++++.. + +....+.... ...+ ...+.+++|+|||+.|++++.+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~--------------------~~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVS--------------------AVGG-GLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCC--------------------CSTT-CEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCc--------------------cCCC-CccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 5555555430 1 2222211100 0002 24778999999999999888761
Q ss_pred CeEEEEeCCC------CCceeee-ecCCCeEEEEEcCCCCEEEEEecC--------CeEEEEeCC-CC---ceeccc-cC
Q 018806 235 SSFTIWDVAQ------GLGTPIR-RGFGGLSILKWSPTGDYFFAAKFD--------GTFYLWETN-TW---TSEPWS-ST 294 (350)
Q Consensus 235 g~i~iwd~~~------~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d--------~~v~iwd~~-~~---~~~~~~-~~ 294 (350)
.+|++||+.+ ++...+. .+...+..++|||||++|+.++.+ ..|++||+. ++ +...+. .+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 2899999998 6666665 556778889999999999887755 379999999 56 444444 34
Q ss_pred CCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeC
Q 018806 295 SGFVTGATWDPEGRMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 295 ~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~ 326 (350)
...+..++|+|||++++++. ++...++.++..
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 67899999999999555444 333477777653
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=5.1e-15 Score=140.23 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=135.2
Q ss_pred EEEEe--cCCCE-EEEEEC-CCeEEEEEccCCCCCceeEecCC----CCCCeeEEEEeeCCCeEEEEecC----------
Q 018806 104 GVSWH--QHKHI-VAFISG-STQVIVRDYEDSEGKDACILTSD----SQRDVKVLEWRPNGGRSLSVGCK---------- 165 (350)
Q Consensus 104 ~v~~s--p~g~~-la~~s~-d~~i~iw~~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~d---------- 165 (350)
...|+ |||++ |++++. +..|.+++++.........+... |...+..++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 45565 99998 887654 34444444420010223334321 56678999999999999888876
Q ss_pred CcEEEEecCCC-----CCCceeecccccccceecCCCCCceEEeeecc-CCCCCceeeEEECCCCCeEEEEEeCC-----
Q 018806 166 GGICIWAPSYP-----GNAASVRSGAASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGPDGRYLASASYES----- 234 (350)
Q Consensus 166 ~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~~~~~d~----- 234 (350)
..|++||+... +.... +. .+. ..+..++|||||++|++++.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~-------------------------l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRE-------------------------LSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEE-------------------------SSCSCS-SEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred eEEEEEECCCCccccCCceeE-------------------------EEecCC-CcccCceECCCCCEEEEEECCCCCCCC
Confidence 57899998741 22111 22 222 5778899999999999887652
Q ss_pred --CeEEEEeCC-CC---Cceeeeec-CCCeEEEEEcCCCCEEEEEecCC--eEEEEeCCCCceeccccCCCC--------
Q 018806 235 --SSFTIWDVA-QG---LGTPIRRG-FGGLSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWSSTSGF-------- 297 (350)
Q Consensus 235 --g~i~iwd~~-~~---~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~-------- 297 (350)
..|++||+. ++ +...+..+ ...+..++|+|||++++++..++ .|++||+.+++...+..+...
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCST
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccc
Confidence 379999999 56 44445443 57899999999999777777777 777788777776555433222
Q ss_pred -eEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 298 -VTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 298 -v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+..++|+|++++++++..+...++.++...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp TCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred cCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 457899999998887766446777777653
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=3.1e-15 Score=132.20 Aligned_cols=222 Identities=12% Similarity=0.087 Sum_probs=139.2
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEE--eeCCCeEEEEe----------------
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEW--RPNGGRSLSVG---------------- 163 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~---------------- 163 (350)
+.++.|+|||++|++++.++.+++||+.. ++..... ..+...+....| +|++..++...
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~--g~~~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLAT--LEENVVY-QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTT--CCEEEEE-ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCC--Ccceeee-echhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 44678999999999999999999999964 4433333 234444544444 78877666432
Q ss_pred ------cCCcEEEEecCCCCCCceeec-------ccccc-cce-ecC---CC----CCceEEee-------eccCCCC-C
Q 018806 164 ------CKGGICIWAPSYPGNAASVRS-------GAASF-LGA-LSR---GP----GTRWTLVD-------FLRSQNG-E 213 (350)
Q Consensus 164 ------~d~~v~iwd~~~~~~~~~~~~-------~~~~~-~~~-~~~---~~----~~~~~~~~-------~~~~~~~-~ 213 (350)
.+..|++||+..+. ...+.. ..+++ .+. +.+ .. ...+..++ .+..+.. .
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 238 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTGE-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE 238 (388)
T ss_dssp HHGGGCCCEEEEEEETTTCC-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE
T ss_pred hhhccCCcceEEEEECCCCc-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc
Confidence 23678899987543 222221 12233 222 111 11 11222221 1222221 2
Q ss_pred ceeeEEECCCCCeEEEEEeCCC----eEEEEeCCCCCceeeeecCCC------eEEEEEcCCCCEEEEE---------ec
Q 018806 214 QITALSWGPDGRYLASASYESS----SFTIWDVAQGLGTPIRRGFGG------LSILKWSPTGDYFFAA---------KF 274 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g----~i~iwd~~~~~~~~~~~~~~~------v~~~~~sp~g~~l~~~---------~~ 274 (350)
.+..++|+|||+.|++.+.+++ .|++||+.+++...+...... ...++|+|||+.|+.. ..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 4678899999999877665322 399999999876554432221 1223799999988754 34
Q ss_pred CCeEEEEeCCCCceeccccCCC-----------CeEEEEEcCCCCEEEEEE--CCCeEEEEEEeCC
Q 018806 275 DGTFYLWETNTWTSEPWSSTSG-----------FVTGATWDPEGRMILLAF--AGSLTLGSIHFAS 327 (350)
Q Consensus 275 d~~v~iwd~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~l~~~~--~~~~~~~~~~~~~ 327 (350)
+..|++||+.+++...+..+.. .+.+++|+|||+.|++++ ++...+|.+++..
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred CCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 5689999999988877766655 578899999999999887 3446677776653
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=7.8e-15 Score=129.77 Aligned_cols=224 Identities=14% Similarity=0.110 Sum_probs=138.5
Q ss_pred EEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeE-------------------EEEeeCCCeEEEEe-
Q 018806 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKV-------------------LEWRPNGGRSLSVG- 163 (350)
Q Consensus 104 ~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~sp~~~~l~~~~- 163 (350)
.+.|+|||++|++++.++.+.+|++.. ++..... ..+...... +.|+|+++.+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~--~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLET--LEEQVIY-TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTT--CCEEEEE-ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCC--CCcEEEE-ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 478999999999999999999999864 3332222 223322222 34566665554432
Q ss_pred ----cCCcEEEEecCCCCCCceeec-------ccccc-cce-ecC---CCC----CceEEee-------eccCCC-CCce
Q 018806 164 ----CKGGICIWAPSYPGNAASVRS-------GAASF-LGA-LSR---GPG----TRWTLVD-------FLRSQN-GEQI 215 (350)
Q Consensus 164 ----~d~~v~iwd~~~~~~~~~~~~-------~~~~~-~~~-~~~---~~~----~~~~~~~-------~~~~~~-~~~v 215 (350)
.+..|++||+..+.. ..+.. ..+++ .+. +.+ ... ..+..++ .+..+. ...+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGEL-EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC 240 (396)
T ss_dssp HHTCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred ccCCCcceEEEEECCCCcE-EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence 346788999874432 22211 12222 121 211 111 1222222 111111 1246
Q ss_pred eeEEECCCCCeEEEEEeCC----CeEEEEeCCCCCceeeeecCCCeEEEEEcC-CCCEEEEEe----------------c
Q 018806 216 TALSWGPDGRYLASASYES----SSFTIWDVAQGLGTPIRRGFGGLSILKWSP-TGDYFFAAK----------------F 274 (350)
Q Consensus 216 ~~~~~sp~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~----------------~ 274 (350)
..++|+|+|++|++++.++ +.|++||+.+++...+..... .. +.|+| +|+++++++ .
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 7789999999988876542 249999999887655543332 33 89999 999888754 2
Q ss_pred CCeEEEEeCCCCceeccccCCC-----------CeEEEEEcCCCCEEEEEEC--CCeEEEEEEeCCCCCCCc
Q 018806 275 DGTFYLWETNTWTSEPWSSTSG-----------FVTGATWDPEGRMILLAFA--GSLTLGSIHFASKPPSLD 333 (350)
Q Consensus 275 d~~v~iwd~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~l~~~~~--~~~~~~~~~~~~~~~~~~ 333 (350)
+..|++||+.+++...+..+.. .+..++|+|||+.|+++++ +...++.+++......+.
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 319 DPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp CCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred CCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 4789999999888766655544 2567899999999988873 446788888876665444
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=8.7e-14 Score=132.82 Aligned_cols=197 Identities=10% Similarity=0.071 Sum_probs=136.0
Q ss_pred CeeEEEEecCCCEEEEEECCC-----eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCc--------
Q 018806 101 DLQGVSWHQHKHIVAFISGST-----QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGG-------- 167 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-------- 167 (350)
.+.+++|||||++||+++.++ .|++||+.. ++...... .+ ..+..++|+|||+.|+++..++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t--g~~~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG--AKELPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT--TEEEEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC--CCCCcccc-cC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 588999999999999876543 899999964 44333222 12 23678999999999999887754
Q ss_pred --------EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe-----CC
Q 018806 168 --------ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY-----ES 234 (350)
Q Consensus 168 --------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-----d~ 234 (350)
|++|++..+.....+ ......+ ...+..+.|+|||++|+..+. +
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~---------------------v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~- 258 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDIL---------------------CAEFPDE-PKWMGGAELSDDGRYVLLSIREGCDPV- 258 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEE---------------------EECCTTC-TTCEEEEEECTTSCEEEEEEECSSSSC-
T ss_pred cccCCCCEEEEEECCCCcccceE---------------------EeccCCC-CeEEEEEEEcCCCCEEEEEEEccCCCc-
Confidence 889998743321111 1111112 245788999999999998775 4
Q ss_pred CeEEEEeCCC------C--CceeeeecCCCeEEEEEcCCCCEEEEEecC----CeEEEEeCCCCce---eccccCCC--C
Q 018806 235 SSFTIWDVAQ------G--LGTPIRRGFGGLSILKWSPTGDYFFAAKFD----GTFYLWETNTWTS---EPWSSTSG--F 297 (350)
Q Consensus 235 g~i~iwd~~~------~--~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d----~~v~iwd~~~~~~---~~~~~~~~--~ 297 (350)
..|++||+.+ + ....+..+...+.. .|+|+|+.|+..+.. ..|++||+.+++. ..+..+.. .
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDV 337 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred cEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCe
Confidence 4899999986 5 34455555555544 588999988766543 3699999988753 44555543 6
Q ss_pred eEEEEEcCCCCEEEEEE-CCCeEEEEEEe
Q 018806 298 VTGATWDPEGRMILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~-~~~~~~~~~~~ 325 (350)
+..++|++++.++++.. ++...++.+++
T Consensus 338 ~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp EEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred EEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 88899997776666665 55567888876
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.61 E-value=4.4e-15 Score=131.36 Aligned_cols=212 Identities=11% Similarity=0.035 Sum_probs=135.1
Q ss_pred eeEEEEecCCCEEEEEECC---CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 102 LQGVSWHQHKHIVAFISGS---TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d---~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
+.+++|||||++|++.... ..|.+|++.. ++ ...+...+......+.|+|||+.+++++.++.+++||+....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~--~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~- 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET--QQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE- 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--TE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC-
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC--Cc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC-
Confidence 5677899999999887653 3577777643 43 233333333233448899999999898888899999987433
Q ss_pred Cceeeccc--ccccce-ecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-----eCCCeEEEEeCCCCCceee
Q 018806 179 AASVRSGA--ASFLGA-LSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS-----YESSSFTIWDVAQGLGTPI 250 (350)
Q Consensus 179 ~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-----~d~g~i~iwd~~~~~~~~~ 250 (350)
...+.... ..+.+. +.+........ .....+.|+|+++.++... .+ ..|++||+.+++...+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~---------~~~~~~~~spdg~~~~~~~~~~~~~~-~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVG---------IEILKRDWQPLTSWEKFAEFYHTNPT-CRLIKVDIETGELEVI 183 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEE---------EEEEGGGCCCCCSHHHHHHHHHTCCC-EEEEEEETTTCCEEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCcccc---------ccccccccCCCCcceeeeeeccCCCc-ceEEEEECCCCcEEee
Confidence 22222211 000000 11100000000 0011246889999887653 44 4899999999887777
Q ss_pred eecCCCeEEEEEcC-CCCEEEEEecC------CeEEEEeCCCCceeccccC--CCCeEEEEEcCCCCEEEEEE-C-CC--
Q 018806 251 RRGFGGLSILKWSP-TGDYFFAAKFD------GTFYLWETNTWTSEPWSST--SGFVTGATWDPEGRMILLAF-A-GS-- 317 (350)
Q Consensus 251 ~~~~~~v~~~~~sp-~g~~l~~~~~d------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~-~-~~-- 317 (350)
..+...+..+.|+| +|+.|+..+.+ ..|++||+.+++...+..+ ...+..++|+|||++|+++. . +.
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 77778899999999 88877766543 4689999987776555443 23578899999999887775 2 22
Q ss_pred eEEEEEEeCC
Q 018806 318 LTLGSIHFAS 327 (350)
Q Consensus 318 ~~~~~~~~~~ 327 (350)
..++.|++..
T Consensus 264 ~~l~~~d~~~ 273 (396)
T 3c5m_A 264 RVIYKANPET 273 (396)
T ss_dssp EEEEEECTTT
T ss_pred ceEEEEECCC
Confidence 2366666643
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.60 E-value=1.5e-13 Score=120.39 Aligned_cols=201 Identities=7% Similarity=-0.033 Sum_probs=131.8
Q ss_pred EEEEecCCCEEEEEEC----------CCeEEEEEccCCCCCceeEecCC-----CCCCeeEEEEeeCCCeEEEEec--CC
Q 018806 104 GVSWHQHKHIVAFISG----------STQVIVRDYEDSEGKDACILTSD-----SQRDVKVLEWRPNGGRSLSVGC--KG 166 (350)
Q Consensus 104 ~v~~sp~g~~la~~s~----------d~~i~iw~~~~~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~~--d~ 166 (350)
.++|+|||++|+++.. ++.|.+||..+ .+....+... +......++|+|||++++++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t--~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK--LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT--CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC--CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 7999999999998862 56799999853 4444444221 2345788999999988887764 48
Q ss_pred cEEEEecCCCCCCce-eecccc-----cccc---eecCCCCCc-------------------------------------
Q 018806 167 GICIWAPSYPGNAAS-VRSGAA-----SFLG---ALSRGPGTR------------------------------------- 200 (350)
Q Consensus 167 ~v~iwd~~~~~~~~~-~~~~~~-----~~~~---~~~~~~~~~------------------------------------- 200 (350)
.|.+||+...+.... +..... .+.. .++.+.++.
T Consensus 132 ~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred eEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 899999986544333 211110 0000 001111111
Q ss_pred -----------eEEeee----------cc--C----CC---CCceeeEEECCCCCeEEEEEe-C---------CCeEEEE
Q 018806 201 -----------WTLVDF----------LR--S----QN---GEQITALSWGPDGRYLASASY-E---------SSSFTIW 240 (350)
Q Consensus 201 -----------~~~~~~----------~~--~----~~---~~~v~~~~~sp~g~~l~~~~~-d---------~g~i~iw 240 (350)
...++. +. . +. ......++|+|+++.++.+.. + .++|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 111110 00 0 00 001112789999888887654 1 1389999
Q ss_pred eCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCC--ceecc-ccCCCCeEEEEEcCCCC
Q 018806 241 DVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW--TSEPW-SSTSGFVTGATWDPEGR 308 (350)
Q Consensus 241 d~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~--~~~~~-~~~~~~v~~~~~s~~g~ 308 (350)
|+.+++......... +.+++|+|||++|++++. ++|.+||..++ +.... .........++++|+|+
T Consensus 292 D~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999998766554444 999999999999998886 99999999999 77544 46677889999999986
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=9e-13 Score=113.87 Aligned_cols=222 Identities=9% Similarity=-0.002 Sum_probs=140.1
Q ss_pred CeeEEEEecCCCEEEEEECC------------------------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCC
Q 018806 101 DLQGVSWHQHKHIVAFISGS------------------------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNG 156 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 156 (350)
.+.+++++|+|+++++...+ +.|.+||..+ ++........+-.....++++|+|
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN--AEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT--CCEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC--CeEEeccCCCccCCceEEEECCCC
Confidence 59999999999999887766 4688998743 554444433445578999999998
Q ss_pred CeEEEEecCCcEEEEecCCCC-CCceee--------cccccccceecCCC-CCc-----------eEEee-------ecc
Q 018806 157 GRSLSVGCKGGICIWAPSYPG-NAASVR--------SGAASFLGALSRGP-GTR-----------WTLVD-------FLR 208 (350)
Q Consensus 157 ~~l~~~~~d~~v~iwd~~~~~-~~~~~~--------~~~~~~~~~~~~~~-~~~-----------~~~~~-------~~~ 208 (350)
+.+++...++.|++|+..... ....+. .........+++++ ++. +..+. .+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 755555557999999976321 222221 01111122233333 222 22111 111
Q ss_pred CCC---------CCceeeEEECCC-CCeEEEEEeCCCeEEEEeCCCCCceeeee---cCCCeEEEEEcCCCCEEEEE---
Q 018806 209 SQN---------GEQITALSWGPD-GRYLASASYESSSFTIWDVAQGLGTPIRR---GFGGLSILKWSPTGDYFFAA--- 272 (350)
Q Consensus 209 ~~~---------~~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd~~~~~~~~~~~---~~~~v~~~~~sp~g~~l~~~--- 272 (350)
... ......++++|+ ++.+++...+ +.|++||..+++...... +...+..++|+| +..++..
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-GRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-TEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-CEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 100 023788999999 5544444455 699999999777655442 345688999999 4333332
Q ss_pred ----ecCCeEEEEeCCCCceeccc----cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 273 ----KFDGTFYLWETNTWTSEPWS----STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 273 ----~~d~~v~iwd~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
..+..|++||..+++..... .+...+..++++|+| .|+++..+...++.|+...
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 33458999999999886543 456678999999999 5666665555666766654
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=1.2e-12 Score=111.23 Aligned_cols=217 Identities=9% Similarity=-0.010 Sum_probs=138.8
Q ss_pred CeeEEEEecCCC-EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~-~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
...+++|+|+|+ +++++..++.|..|+.+. + ...+ ..+...+.+++++|+|+.+++...++.|.+||...+...
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~--~--~~~~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDG--Q--LSPE-MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTS--C--EEEE-ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCC--C--eEEE-ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 367899999998 677777889999999853 3 3333 245677999999999765544444689999998644322
Q ss_pred ceeec---ccccccceecCCCCCceEE-------------------------ee--------eccCCCCCceeeEEECCC
Q 018806 180 ASVRS---GAASFLGALSRGPGTRWTL-------------------------VD--------FLRSQNGEQITALSWGPD 223 (350)
Q Consensus 180 ~~~~~---~~~~~~~~~~~~~~~~~~~-------------------------~~--------~~~~~~~~~v~~~~~sp~ 223 (350)
..... ........+..++++.+.+ +. .+..+ ......++|+|+
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~-~~~~~gi~~s~d 182 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD-RVKPNGLAFLPS 182 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC-CSSEEEEEECTT
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecC-CCCCccEEECCC
Confidence 11110 0011112233333332211 10 11112 235678999999
Q ss_pred CCeEEEEEeCCCeEEEEeCC-CCCc---eeee-ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCe
Q 018806 224 GRYLASASYESSSFTIWDVA-QGLG---TPIR-RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV 298 (350)
Q Consensus 224 g~~l~~~~~d~g~i~iwd~~-~~~~---~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v 298 (350)
|+.+++.+.+ +.|.+|++. .+.. .... .+...+..++++++|+++++. ++.|.+||.+......+..+.. +
T Consensus 183 g~~lv~~~~~-~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 183 GNLLVSDTGD-NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT-T 258 (296)
T ss_dssp SCEEEEETTT-TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC-C
T ss_pred CCEEEEeCCC-CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC-c
Confidence 9999555555 699999987 4443 2222 234556789999999866655 7899999987433344444555 8
Q ss_pred EEEEE-cCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 299 TGATW-DPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 299 ~~~~~-s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
++++| +|+++.|++++.+ .++.++...+.
T Consensus 259 ~~~~f~~~d~~~L~v~t~~--~l~~~~~~~~~ 288 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVST--EFWSIETNVRG 288 (296)
T ss_dssp CEEEEESTTSCEEEEEETT--EEEEEECSCCB
T ss_pred eeEEEECCCCCEEEEEcCC--eEEEEEccccc
Confidence 99999 6899999888754 46666665443
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=1.5e-12 Score=109.98 Aligned_cols=197 Identities=8% Similarity=0.011 Sum_probs=130.0
Q ss_pred cCeeEEEEe-cCCCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCC
Q 018806 100 VDLQGVSWH-QHKHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 100 ~~V~~v~~s-p~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~ 177 (350)
..+.+++++ ++++++++... ++.|.+|+.+ ++....+...+...+..++++|+|+.+++...++.|.+||.. ..
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 152 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY---GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GN 152 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTT---SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCC---CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CC
Confidence 357899995 67776665533 7899999943 554444433445678999999997655444456899999864 21
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec--CC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG--FG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~--~~ 255 (350)
....+. ...+ ...+..++++|+|+.+++...+ +.|++||........+... ..
T Consensus 153 ~~~~~~-----------------------~~~~-~~~p~~i~~~~~g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~g~~~ 207 (286)
T 1q7f_A 153 VLHKFG-----------------------CSKH-LEFPNGVVVNDKQEIFISDNRA-HCVKVFNYEGQYLRQIGGEGITN 207 (286)
T ss_dssp EEEEEE-----------------------CTTT-CSSEEEEEECSSSEEEEEEGGG-TEEEEEETTCCEEEEESCTTTSC
T ss_pred EEEEeC-----------------------CCCc-cCCcEEEEECCCCCEEEEECCC-CEEEEEcCCCCEEEEEccCCccC
Confidence 111100 0122 2468899999999877666667 5999999854322222222 25
Q ss_pred CeEEEEEcCCCCEEEEEecCC-eEEEEeCCCCceeccccC--CCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 256 GLSILKWSPTGDYFFAAKFDG-TFYLWETNTWTSEPWSST--SGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~~d~-~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.+..++++++|+++++...++ .|++||........+..+ ...+.+++++|+|+++++ .. +..+..|++..
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~-~~~v~v~~~~~ 280 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SK-DYRLYIYRYVQ 280 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ET-TTEEEEEECSC
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CC-CCeEEEEEccc
Confidence 688999999999888887775 999999654333333333 234789999999986665 42 34566666543
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=4.4e-13 Score=127.66 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=133.2
Q ss_pred cCeeEEEEecCCCEEEEEE-----CCCeEEEEEccCCCCCce-eEecCCCCCCeeEEEEeeCCCeEEEEecCCc------
Q 018806 100 VDLQGVSWHQHKHIVAFIS-----GSTQVIVRDYEDSEGKDA-CILTSDSQRDVKVLEWRPNGGRSLSVGCKGG------ 167 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s-----~d~~i~iw~~~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~------ 167 (350)
..+.+++|||||++||.+. .+..|++||+.+ ++.. .... . ......++|+|||+.|++++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t--g~~~~~~~~-~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS--GEWSKVDVI-E-GGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT--CCBCSSCCB-S-CCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC--CCCcCCccc-C-cccccceEEecCCCEEEEEEecCCCCCccc
Confidence 3589999999999999643 346899999965 4332 1111 1 111268999999999999888755
Q ss_pred -------EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-C--eE
Q 018806 168 -------ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-S--SF 237 (350)
Q Consensus 168 -------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g--~i 237 (350)
|++|++..+..... ++.....+. ..+..+.|||||++|++.+.++ + .|
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~---------------------lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~l 254 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDT---------------------VVHERTGDP-TTFLQSDLSRDGKYLFVYILRGWSENDV 254 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCE---------------------EEECCCCCT-TCEEEEEECTTSCCEEEEEEETTTEEEE
T ss_pred cCCCCCEEEEEECCCCchhce---------------------EEEecCCCC-EEEEEEEECCCCCEEEEEEeCCCCceEE
Confidence 99999874432111 111112222 4688999999999999887662 1 67
Q ss_pred EEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEec----CCeEEEEeCCCCce---eccccC--CCCeEEEEEcCCCC
Q 018806 238 TIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKF----DGTFYLWETNTWTS---EPWSST--SGFVTGATWDPEGR 308 (350)
Q Consensus 238 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~----d~~v~iwd~~~~~~---~~~~~~--~~~v~~~~~s~~g~ 308 (350)
++|+..+++...+..+...+....| ++|. ++..+. ++.|++||+.+++. ..+..+ ...+..++|+ ++.
T Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~ 331 (695)
T 2bkl_A 255 YWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGH 331 (695)
T ss_dssp EEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTE
T ss_pred EEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCE
Confidence 7777766766667766666666667 6777 544443 57999999988763 444433 4457888998 566
Q ss_pred EEEEEE-CCCeEEEEEEeC
Q 018806 309 MILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 309 ~l~~~~-~~~~~~~~~~~~ 326 (350)
++++.. ++...++.+++.
T Consensus 332 lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 332 LSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp EEEEEEETTEEEEEEEETT
T ss_pred EEEEEEECCEEEEEEEeCC
Confidence 666555 555777777754
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.56 E-value=3e-13 Score=117.55 Aligned_cols=181 Identities=16% Similarity=0.232 Sum_probs=116.5
Q ss_pred cCeeEEEEecCCCEEEEEECC---Ce--EEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC---------
Q 018806 100 VDLQGVSWHQHKHIVAFISGS---TQ--VIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK--------- 165 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d---~~--i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------- 165 (350)
..+..++|||||++||+++.+ +. |.+|++. +++..... . +.. +..++|+|||+.+++++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~--~g~~~~l~-~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE--TLSSKKIL-E-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT--TTEEEEEE-E-ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC--CCceEEEE-c-CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 347889999999999988754 44 5555553 34433322 2 233 9999999999888887643
Q ss_pred ------------------CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeE
Q 018806 166 ------------------GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYL 227 (350)
Q Consensus 166 ------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 227 (350)
..|++||+..+.. ...+.. . .+..++|+||| .+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~-------------------------~~~l~~--~-~~~~~~~spdg-~~ 184 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEV-------------------------IEEFEK--P-RFSSGIWHRDK-IV 184 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEE-------------------------EEEEEE--E-TTCEEEEETTE-EE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeE-------------------------EeeecC--C-CcccccCCCCe-EE
Confidence 4566777652211 011211 1 56789999999 66
Q ss_pred EEEEeCC--------CeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecC--------CeEEEEeCCCCceecc
Q 018806 228 ASASYES--------SSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD--------GTFYLWETNTWTSEPW 291 (350)
Q Consensus 228 ~~~~~d~--------g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--------~~v~iwd~~~~~~~~~ 291 (350)
+++..+. ..|.++| +++...+..+ ..+..+ +|||++|+.++.+ ..|++|| +++...+
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEEecccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 6664431 1455566 5555555555 445444 9999999877644 3788888 5665544
Q ss_pred c-cCCCCeEE-EEEcCCCCEEEEEE-CCCeEEEEEE
Q 018806 292 S-STSGFVTG-ATWDPEGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 292 ~-~~~~~v~~-~~~s~~g~~l~~~~-~~~~~~~~~~ 324 (350)
. .+...+.. +.|+ || +++++. ++...+| ++
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 4 44667876 9999 88 666665 5556677 66
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=2.4e-13 Score=118.59 Aligned_cols=173 Identities=10% Similarity=0.001 Sum_probs=127.2
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCC---------CCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEE
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSE---------GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 171 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~---------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iw 171 (350)
.++.+++++...++++|+.++ +.+|++.... .+..... .+.. |+.++| |+..++++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK--EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE--ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe--eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 699999999999999999885 6679874311 1111222 3556 999999 76666665 88999999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR 251 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~ 251 (350)
|+........ ...+. ..+.++.+.+. .+++++.| |.|.+||+..+....
T Consensus 112 dv~sl~~~~~-------------------------~~~~~-~~v~~i~~~~p--~~av~~~d-G~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 112 DLEELSEFRT-------------------------VTSFE-KPVFQLKNVNN--TLVILNSV-NDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp ESSSTTCEEE-------------------------EEECS-SCEEEEEECSS--EEEEEETT-SEEEEEETTTCCEEE--
T ss_pred EchhhhccCc-------------------------cceee-cceeeEEecCC--CEEEEECC-CCEEEEEccCCcccc--
Confidence 9984432111 12222 45777777654 38888888 799999999887654
Q ss_pred ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce---ecc------c---cCCCCeEEEEEcCCCCEEEEEE
Q 018806 252 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS---EPW------S---STSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~---~~~------~---~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
....|.+++|||+| ++.|..||++++|+.+.++. ..+ . .|...|.++.|.++++++++-.
T Consensus 161 -~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 161 -LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp -EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred -ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 34689999999999 67888999999999988773 222 2 3678899999999999988643
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.54 E-value=9.9e-12 Score=107.32 Aligned_cols=223 Identities=8% Similarity=0.048 Sum_probs=138.1
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC----CcEEEEecCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----GGICIWAPSYP 176 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~v~iwd~~~~ 176 (350)
.+.+++|+++|++++++..++.|.+|+.+. ++... +...+...+.+++|+|+|+.+++...+ +.|.+||....
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~--~~~~~-~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPET--KEIKR-PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTT--CCEEE-EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCC--CcEEE-EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 468899999999777778889999999853 33322 222456789999999997655554444 58999998743
Q ss_pred CCCceeec-ccccccceecCCCCCceEE--------------eee---------ccCCCCCceeeEEECCCCCeEEEEEe
Q 018806 177 GNAASVRS-GAASFLGALSRGPGTRWTL--------------VDF---------LRSQNGEQITALSWGPDGRYLASASY 232 (350)
Q Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~---------~~~~~~~~v~~~~~sp~g~~l~~~~~ 232 (350)
.....+.. ........+..++++.+.+ +.. +... ...+..++|+|+|+.|+.+..
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-ISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-ESSEEEEEECTTSSEEEEEEG
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-CCcccceEECCCCCEEEEEeC
Confidence 32211111 1111122233333322111 110 0001 124678999999997766554
Q ss_pred CCCeEEEEeCCC-CCcee-----ee-ec--CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCC------CC
Q 018806 233 ESSSFTIWDVAQ-GLGTP-----IR-RG--FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTS------GF 297 (350)
Q Consensus 233 d~g~i~iwd~~~-~~~~~-----~~-~~--~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~ 297 (350)
.++.|.+||+.+ +.... .. .. ...+..++++++|+++++...++.|.+||.+......+.... ..
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~ 281 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLR 281 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCB
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccC
Confidence 326999999964 33211 11 11 136778999999998887777899999998533333333222 26
Q ss_pred eEEEEEcCCCCEEEEEECC-----CeEEEEEEeCC
Q 018806 298 VTGATWDPEGRMILLAFAG-----SLTLGSIHFAS 327 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~~~-----~~~~~~~~~~~ 327 (350)
+.+++|+|||+.|++++.. ...++.++...
T Consensus 282 ~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 282 STHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp CCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred cceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 8899999999888776633 35677777653
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.53 E-value=7.3e-12 Score=105.75 Aligned_cols=192 Identities=9% Similarity=0.047 Sum_probs=130.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecC-----CCCCCeeEEEEe-eCCCeEEEEec--CCcEEEEe
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTS-----DSQRDVKVLEWR-PNGGRSLSVGC--KGGICIWA 172 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~s-p~~~~l~~~~~--d~~v~iwd 172 (350)
.+.+++++++|+++++...++.|.+|+.+ +.....+.. ++...+..+++. ++ ..++++.. ++.|++||
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~---g~~~~~~~~~~~~~~~~~~p~~i~~~~~~-g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNS-GDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTT-TEEEEEECGGGCEEEEEC
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC---CcEEEEecccCCCcccccCceEEEEEcCC-CeEEEEcCCCCCEEEEEC
Confidence 48899999999988887889999999974 333333321 233568899995 55 55555553 78999999
Q ss_pred cCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee
Q 018806 173 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR 252 (350)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~ 252 (350)
.. .... ..+.......+.+++++|+|+.+++...+ +.|.+||... +......
T Consensus 107 ~~-g~~~-------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~g-~~~~~~~ 158 (286)
T 1q7f_A 107 QY-GQFV-------------------------RKFGATILQHPRGVTVDNKGRIIVVECKV-MRVIIFDQNG-NVLHKFG 158 (286)
T ss_dssp TT-SCEE-------------------------EEECTTTCSCEEEEEECTTSCEEEEETTT-TEEEEECTTS-CEEEEEE
T ss_pred CC-CcEE-------------------------EEecCccCCCceEEEEeCCCCEEEEECCC-CEEEEEcCCC-CEEEEeC
Confidence 43 2211 11111112468899999999876666556 5999999653 3333332
Q ss_pred ---cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccC--CCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 253 ---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSST--SGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 253 ---~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
+...+..++++++|+++++...++.|++||........+... ...+..++++++|+++++...+...+..++
T Consensus 159 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 159 CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 335688999999999777777789999999865433333322 357899999999987765543322555554
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=1.2e-11 Score=118.11 Aligned_cols=203 Identities=10% Similarity=-0.006 Sum_probs=139.2
Q ss_pred CeeEEEEecCCCEEEEEECCCe----------------EEEEEccCCCCCceeEecC-CCCCCeeEEEEeeCCCeEEEEe
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQ----------------VIVRDYEDSEGKDACILTS-DSQRDVKVLEWRPNGGRSLSVG 163 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~----------------i~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~ 163 (350)
.+.+++|+|||+.|++++.++. |++|++.+........... .+...+..+.|+|||+.+++.+
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3678999999999999988765 9999986432222222221 2455688999999999888876
Q ss_pred c-----CCcEEEEecCC------CCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe
Q 018806 164 C-----KGGICIWAPSY------PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY 232 (350)
Q Consensus 164 ~-----d~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 232 (350)
. +..+++||+.. +... ...+..+. ..+.. .|+|+|+.|+..+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~------------------------~~~l~~~~-~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILK------------------------WVKLIDNF-EGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCC------------------------CEEEECSS-SSCEE-EEEEETTEEEEEEC
T ss_pred EccCCCccEEEEEECcccccccCCccc------------------------eEEeeCCC-CcEEE-EEeccCCEEEEEEC
Confidence 5 46789999874 1100 11122232 23333 58899999888776
Q ss_pred CC---CeEEEEeCCCCCc---eeeeecCC--CeEEEEEcCCCCEEEEEecCC--eEEEEeCCCCce-eccccCCCCeEEE
Q 018806 233 ES---SSFTIWDVAQGLG---TPIRRGFG--GLSILKWSPTGDYFFAAKFDG--TFYLWETNTWTS-EPWSSTSGFVTGA 301 (350)
Q Consensus 233 d~---g~i~iwd~~~~~~---~~~~~~~~--~v~~~~~sp~g~~l~~~~~d~--~v~iwd~~~~~~-~~~~~~~~~v~~~ 301 (350)
.+ +.|.+||+.++.. ..+..+.. .+..++|++++.++++...++ .|++||+.+++. ..+..+.+.+..+
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~ 385 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGY 385 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEE
T ss_pred CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEE
Confidence 42 3799999988752 44555543 577899998787888888887 467778867764 4555567778899
Q ss_pred EEcCCCCEEEEEE---CCCeEEEEEEeCCCC
Q 018806 302 TWDPEGRMILLAF---AGSLTLGSIHFASKP 329 (350)
Q Consensus 302 ~~s~~g~~l~~~~---~~~~~~~~~~~~~~~ 329 (350)
+++|+++.|+++. .....++.+++....
T Consensus 386 ~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 386 SGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 9999998777654 223578888875433
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.48 E-value=1.1e-11 Score=103.69 Aligned_cols=195 Identities=8% Similarity=0.008 Sum_probs=129.6
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.+.+++++++|+++++.. ++.|.+|+.+. .....+.......+..++++++|..+++...++.|.+|+......
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-- 141 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGS---NNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-- 141 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTC---SCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCC---ceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--
Confidence 578899999999665544 88899999753 222223222335789999999976444444568899996542111
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeEE
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLSI 259 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~~ 259 (350)
... .... ...+.+++++++|+.+++...+ +.|.+||.......... .+...+..
T Consensus 142 ~~~-----------------------~~~~-~~~p~~i~~~~~g~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~p~~ 196 (270)
T 1rwi_B 142 TVL-----------------------PFTG-LNDPDGVAVDNSGNVYVTDTDN-NRVVKLEAESNNQVVLPFTDITAPWG 196 (270)
T ss_dssp EEC-----------------------CCCS-CCSCCCEEECTTCCEEEEEGGG-TEEEEECTTTCCEEECCCSSCCSEEE
T ss_pred Eee-----------------------cccc-CCCceeEEEeCCCCEEEEECCC-CEEEEEecCCCceEeecccCCCCceE
Confidence 000 0111 1367889999999866655556 59999998876544322 22366889
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
++++++|.++++...++.|.+||..+....... .+...+.+++++++|+ |+++..+...+..++...
T Consensus 197 i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCG
T ss_pred EEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCC
Confidence 999999977777767889999999776543332 2335689999999998 444554445666665543
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.47 E-value=3.1e-12 Score=111.12 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=119.2
Q ss_pred eeEEEEecCCCEEEEEECC---------------------------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEee
Q 018806 102 LQGVSWHQHKHIVAFISGS---------------------------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRP 154 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d---------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp 154 (350)
+.+++|+|||+.|++++.+ ..|.+|++.. ++....+.. . .+..++|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~--~~~~~~l~~--~-~~~~~~~sp 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES--EEVIEEFEK--P-RFSSGIWHR 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT--TEEEEEEEE--E-TTCEEEEET
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC--CeEEeeecC--C-CcccccCCC
Confidence 8899999999999988743 4677788743 443233332 3 788999999
Q ss_pred CCCeEEEEecCC-------cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeE
Q 018806 155 NGGRSLSVGCKG-------GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYL 227 (350)
Q Consensus 155 ~~~~l~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 227 (350)
+| .++++..+. ...||.+. .+.... +..+ ..+..+ +|||++|
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~-------------------------l~~~--~~~~~~--spdg~~l 229 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEK-------------------------MFEK--VSFYAV--DSDGERI 229 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEE-------------------------EEEE--ESEEEE--EECSSCE
T ss_pred Ce-EEEEEecccccccccccccEEEeC-CCceEE-------------------------eccC--cceeeE--CCCCCEE
Confidence 97 444443332 44566554 222111 1111 233333 8999999
Q ss_pred EEEEeCC-------CeEEEEeCCCCCceeeee-cCCCeEE-EEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCe
Q 018806 228 ASASYES-------SSFTIWDVAQGLGTPIRR-GFGGLSI-LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV 298 (350)
Q Consensus 228 ~~~~~d~-------g~i~iwd~~~~~~~~~~~-~~~~v~~-~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v 298 (350)
++.+.+. ..|.+|| +++...+.. +...+.. +.|+ +| ++++++.++.++|| +.+++...+..+...|
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v 304 (347)
T 2gop_A 230 LLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWI 304 (347)
T ss_dssp EEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEE
T ss_pred EEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeE
Confidence 8877541 3788888 555444443 3566775 8999 88 88889999999999 8766666666667789
Q ss_pred EEEEEcCCCCEEEEEE-CCC-eEEEEEE
Q 018806 299 TGATWDPEGRMILLAF-AGS-LTLGSIH 324 (350)
Q Consensus 299 ~~~~~s~~g~~l~~~~-~~~-~~~~~~~ 324 (350)
.+++|+| ..++++. .+. ..+|.++
T Consensus 305 ~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 305 MGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999999 5665555 333 2677665
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.46 E-value=1.3e-12 Score=112.86 Aligned_cols=194 Identities=12% Similarity=0.105 Sum_probs=133.6
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.|.++.|++++..++..+.++.++.|. +.....+. .+...+.+++|+|+|+.+++...++.|.+||...... .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-~ 79 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTIT-----AEPWLEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-K 79 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEE-----CEEEEEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-E
T ss_pred ccceeeecCCccceeEEeecccCcccc-----cceeEEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-E
Confidence 477788899888777777788888883 33333342 4556689999999976444445578999999873321 1
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC---CCeEEEEeCCCCCceeeee---cC
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE---SSSFTIWDVAQGLGTPIRR---GF 254 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---~g~i~iwd~~~~~~~~~~~---~~ 254 (350)
.+ ...+ ...+.+++++|+|+.+++...+ .+.|.+||..++....+.. ..
T Consensus 80 ~~------------------------~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 80 RP------------------------FVSH-KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp EE------------------------EECS-SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred EE------------------------eeCC-CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 11 1112 2578999999999877765543 0389999998877653332 23
Q ss_pred CCeEEEEEcCCCCEEEEEec------CCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 255 GGLSILKWSPTGDYFFAAKF------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
..+..++++|+|+++++... .+.|+.+|.++++...+......+..++|+|+|+.|+++......++.++..
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 56889999999987776653 3567777777666654444444678999999999887776544567777664
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=3.3e-11 Score=111.09 Aligned_cols=189 Identities=14% Similarity=0.123 Sum_probs=136.5
Q ss_pred cCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecC--CCCCCceeeccc
Q 018806 109 QHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS--YPGNAASVRSGA 186 (350)
Q Consensus 109 p~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~--~~~~~~~~~~~~ 186 (350)
|.+.++++...++.|.++|..+ ++.+..+. ....+..+.|+|||+++++++.++.|.+||+. .......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t--~~v~~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~----- 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGST--YEIKTVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE----- 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTT--CCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE-----
T ss_pred CCceEEEEeCCCCeEEEEECCC--CeEEEEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE-----
Confidence 4445666667789999999854 55555553 33457799999999988888888999999984 2222222
Q ss_pred ccccceecCCCCCceEEeeeccCCCCCceeeEEEC----CCCCeEEEEEeCCCeEEEEeCCCCCceeeeec---------
Q 018806 187 ASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG----PDGRYLASASYESSSFTIWDVAQGLGTPIRRG--------- 253 (350)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----p~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~--------- 253 (350)
+.. ......++|+ |||+++++++...+++.++|..+.+.......
T Consensus 236 --------------------i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 236 --------------------IKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp --------------------EEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred --------------------Eec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccc
Confidence 221 1356799999 69999998887767999999988876543321
Q ss_pred ---CCCeEEEEEcCCCCEE-EEEecCCeEEEEeCCCCcee--ccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 254 ---FGGLSILKWSPTGDYF-FAAKFDGTFYLWETNTWTSE--PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 254 ---~~~v~~~~~sp~g~~l-~~~~~d~~v~iwd~~~~~~~--~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
...+..+..++++..+ +....+|.|.++|..+.+.. ...........+.|+|+|+++++++..+..+..++...
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred ccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 1257788889987655 45566799999999876542 22234456778999999999999986667788888775
Q ss_pred C
Q 018806 328 K 328 (350)
Q Consensus 328 ~ 328 (350)
.
T Consensus 374 ~ 374 (567)
T 1qks_A 374 G 374 (567)
T ss_dssp T
T ss_pred C
Confidence 4
No 186
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=1.2e-11 Score=118.49 Aligned_cols=197 Identities=13% Similarity=0.071 Sum_probs=129.0
Q ss_pred CeeEEEEecCCCEEEEEECC-----CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCc--------
Q 018806 101 DLQGVSWHQHKHIVAFISGS-----TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGG-------- 167 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-------- 167 (350)
.+.+++|||||++||+++.+ ..|++||+.. ++...... +...+..++|+|| +.++++..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t--g~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD--GKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT--CCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC--CCCCCccC--CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 58899999999999987653 4699999864 44332211 1222467899999 99998887643
Q ss_pred ------EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC----CeE
Q 018806 168 ------ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES----SSF 237 (350)
Q Consensus 168 ------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~----g~i 237 (350)
|++|++..+.....+ +.....+ ...+..+.|||||++|+..+.+. ..|
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~l---------------------v~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l 296 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQP---------------------VFATPEL-PKRGHGASVSSDGRWVVITSSEGTDPVNTV 296 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEE---------------------EECCTTC-TTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred CCCCCEEEEEECCCCchhCEE---------------------EeccCCC-CeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence 778887633211111 1111112 13578999999999998887541 389
Q ss_pred EEEeCCCC--C-ceeeeecCCCeEEEEEcCCCCEEEEEecC----CeEEEEeCCCC--ceeccc-cCCCCeEEEEEcCCC
Q 018806 238 TIWDVAQG--L-GTPIRRGFGGLSILKWSPTGDYFFAAKFD----GTFYLWETNTW--TSEPWS-STSGFVTGATWDPEG 307 (350)
Q Consensus 238 ~iwd~~~~--~-~~~~~~~~~~v~~~~~sp~g~~l~~~~~d----~~v~iwd~~~~--~~~~~~-~~~~~v~~~~~s~~g 307 (350)
++||+.++ + ...+..+........ +|+|+.|+..+.+ +.|++||+.++ +...+. .+...+.+++|+ ++
T Consensus 297 ~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~ 374 (741)
T 1yr2_A 297 HVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN 374 (741)
T ss_dssp EEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT
T ss_pred EEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC
Confidence 99999887 5 555655555555543 4899988877653 46999999885 334443 334456677887 44
Q ss_pred CEEEEEE-CCCeEEEEEEeC
Q 018806 308 RMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 308 ~~l~~~~-~~~~~~~~~~~~ 326 (350)
.++++.. ++...++.+++.
T Consensus 375 ~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 375 RLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp EEEEEEEETTEEEEEEEETT
T ss_pred EEEEEEEECCEEEEEEEeCC
Confidence 5555444 555677777754
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.42 E-value=8.3e-12 Score=118.83 Aligned_cols=191 Identities=9% Similarity=0.080 Sum_probs=128.7
Q ss_pred ecCCCEEEEEECCC---eEEEEEccCCCCCceeEec-----CCCCCCeeEEEEeeCCCeEEEEec-----CCcEEEEecC
Q 018806 108 HQHKHIVAFISGST---QVIVRDYEDSEGKDACILT-----SDSQRDVKVLEWRPNGGRSLSVGC-----KGGICIWAPS 174 (350)
Q Consensus 108 sp~g~~la~~s~d~---~i~iw~~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~-----d~~v~iwd~~ 174 (350)
+|+|++++....++ .-.||..+...+.....+. .+|...+..++|||||++++++.. +..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37999999877654 3456665433333322221 134557899999999988886544 2579999998
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCe-------------EEEEe
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSS-------------FTIWD 241 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~-------------i~iwd 241 (350)
.+..... . .+. ......++|+|||+.|++++.+. . |++|+
T Consensus 156 tg~~~~~---~--------------------~~~---~~~~~~~~wspDg~~l~~~~~d~-~~~~~~~~~~~~~~v~~~~ 208 (695)
T 2bkl_A 156 SGEWSKV---D--------------------VIE---GGKYATPKWTPDSKGFYYEWLPT-DPSIKVDERPGYTTIRYHT 208 (695)
T ss_dssp TCCBCSS---C--------------------CBS---CCTTCCCEECTTSSEEEEEECCC-CTTSCGGGGGGGCEEEEEE
T ss_pred CCCCcCC---c--------------------ccC---cccccceEEecCCCEEEEEEecC-CCCCccccCCCCCEEEEEE
Confidence 5442100 0 011 11226899999999999998873 4 99999
Q ss_pred CCCCCce--eeee---cCCCeEEEEEcCCCCEEEEEecCC----eEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEE
Q 018806 242 VAQGLGT--PIRR---GFGGLSILKWSPTGDYFFAAKFDG----TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 242 ~~~~~~~--~~~~---~~~~v~~~~~sp~g~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 312 (350)
+.++... .+.. +...+..+.|+|||++|+..+.++ .|++|+..+++...+..+...+....| ++|+ +++
T Consensus 209 l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~ 286 (695)
T 2bkl_A 209 LGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYV 286 (695)
T ss_dssp TTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEE
T ss_pred CCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEE
Confidence 9988632 3332 235688999999999998777665 788888777777667766666777777 6777 665
Q ss_pred EEC---CCeEEEEEEeCC
Q 018806 313 AFA---GSLTLGSIHFAS 327 (350)
Q Consensus 313 ~~~---~~~~~~~~~~~~ 327 (350)
.++ ....++.+++..
T Consensus 287 ~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp EECTTCTTCEEEEEBTTB
T ss_pred EECCCCCCCEEEEEeCCC
Confidence 554 346788877654
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=2.8e-11 Score=105.87 Aligned_cols=66 Identities=8% Similarity=0.065 Sum_probs=48.7
Q ss_pred EEEcCCCCEEEEEec-----------CCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 260 LKWSPTGDYFFAAKF-----------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~-----------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
++|+|+++.++++.. .+.|.+||+.+++......... +.+++|+|||++|++++. ..+..|+....
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 688899888876543 3489999999998854333333 899999999999987765 45666665543
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.42 E-value=7.7e-11 Score=101.64 Aligned_cols=194 Identities=8% Similarity=-0.081 Sum_probs=130.4
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCC----CCCeeEEEEeeCCCeEEEEec--CCcEEEEec
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDS----QRDVKVLEWRPNGGRSLSVGC--KGGICIWAP 173 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~--d~~v~iwd~ 173 (350)
.....++++++++..++...++.|.+||..+ ++....+..+. ......+++ . +++++++.. ++.|.++|.
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t--~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKT--YEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTT--TEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEET
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCC--CeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEEC
Confidence 4578999999995444433789999999854 44433333222 114567777 3 466666653 789999998
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC---------CCeEEEEeCCC
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE---------SSSFTIWDVAQ 244 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---------~g~i~iwd~~~ 244 (350)
...+.... +.. ......++++|+|+.++++..+ .+.|.++|..+
T Consensus 160 ~t~~~~~~-------------------------i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 160 ETDKVVDE-------------------------LTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp TTTEEEEE-------------------------EEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred CCCeEEEE-------------------------EEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 84432222 211 1345788999999876665543 14899999998
Q ss_pred CCceeeeec--CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec--cccC-CCCeEEEEEcCCCCEEEEEE----C
Q 018806 245 GLGTPIRRG--FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP--WSST-SGFVTGATWDPEGRMILLAF----A 315 (350)
Q Consensus 245 ~~~~~~~~~--~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~--~~~~-~~~v~~~~~s~~g~~l~~~~----~ 315 (350)
++....... ......++|+|++++|+++.. .|++||..+++... +... ......++++|++..|+++. .
T Consensus 213 ~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 213 FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 876543332 236889999999999987754 89999999888632 2222 45789999999766677675 4
Q ss_pred CCeEEEEEEeC
Q 018806 316 GSLTLGSIHFA 326 (350)
Q Consensus 316 ~~~~~~~~~~~ 326 (350)
....+..++..
T Consensus 291 ~~~~V~v~d~~ 301 (328)
T 3dsm_A 291 QQGIVYRYSPQ 301 (328)
T ss_dssp SEEEEEEECTT
T ss_pred cCCEEEEECCC
Confidence 44566666654
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=2.7e-10 Score=99.87 Aligned_cols=221 Identities=10% Similarity=-0.050 Sum_probs=137.5
Q ss_pred EEEEecCCCEEEEEE----------CCCeEEEEEccCCCCCceeEecCC------CCCCeeEEEEeeCCCeEEEEec--C
Q 018806 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSEGKDACILTSD------SQRDVKVLEWRPNGGRSLSVGC--K 165 (350)
Q Consensus 104 ~v~~sp~g~~la~~s----------~d~~i~iw~~~~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~~~~~--d 165 (350)
.+++||||++|+++. .++.|.+||..+ .+....+..+ +......++|+|||++++++.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t--~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC--CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 899999999999876 367899999853 4433333222 0123458999999998888774 4
Q ss_pred CcEEEEecCCCCCCce-eecccc------cccceecCCCCCceEEeeeccCCCC------------Cc-eeeEEECCCCC
Q 018806 166 GGICIWAPSYPGNAAS-VRSGAA------SFLGALSRGPGTRWTLVDFLRSQNG------------EQ-ITALSWGPDGR 225 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-v~~~~~sp~g~ 225 (350)
+.|.++| ...+.... +..... ....-+..+.++++..+.. .+... .. .....+.+++.
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC
Confidence 7899999 75554444 322111 0001123344555444433 22110 01 12235566666
Q ss_pred eEEEEEeCCCeEEEEeCCCCCceeeee-------------cCCCeEEEEEcCCCCEEEEEec----------CCeEEEEe
Q 018806 226 YLASASYESSSFTIWDVAQGLGTPIRR-------------GFGGLSILKWSPTGDYFFAAKF----------DGTFYLWE 282 (350)
Q Consensus 226 ~l~~~~~d~g~i~iwd~~~~~~~~~~~-------------~~~~v~~~~~sp~g~~l~~~~~----------d~~v~iwd 282 (350)
.++..+.. |.+.+.|+.+.....+.. .......+.++|+++.++++.. ++.|.++|
T Consensus 226 ~~~~~~~~-~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 226 RIVWPVYS-GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred EEEEEcCC-ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 66655566 699999997653221110 1123445789999998877643 35899999
Q ss_pred CCCCceeccccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEEeCCCC
Q 018806 283 TNTWTSEPWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~~~~~~~~~ 329 (350)
..+++............+++|+|||+ .++++..++..+..++.....
T Consensus 305 ~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 305 GLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 99998854444555689999999999 566555456677788776543
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=8.9e-11 Score=98.03 Aligned_cols=195 Identities=9% Similarity=0.023 Sum_probs=128.2
Q ss_pred CeeEEEEecCCCEEE-EEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVA-FISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la-~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
...+++++++|++++ +...++.|.+|+... .. .......+...+.+++++++|. ++++..++.|.+||..... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~--~~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~-~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGS--TG-TTVLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNN-Q 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSC-C
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCC--cc-cceEeeCCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCce-E
Confidence 578999999999666 436788899998642 22 1222223345688999999976 4444448889999876221 1
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLS 258 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~ 258 (350)
.. +.......+..++++++|+.+++...+ +.|.+|+..+....... .....+.
T Consensus 100 ~~-------------------------~~~~~~~~p~~i~~~~~g~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~p~ 153 (270)
T 1rwi_B 100 TV-------------------------LPFDGLNYPEGLAVDTQGAVYVADRGN-NRVVKLAAGSKTQTVLPFTGLNDPD 153 (270)
T ss_dssp EE-------------------------CCCCSCSSEEEEEECTTCCEEEEEGGG-TEEEEECTTCCSCEECCCCSCCSCC
T ss_pred ee-------------------------eecCCcCCCcceEECCCCCEEEEECCC-CEEEEEECCCceeEeeccccCCCce
Confidence 11 110112467899999999866665556 69999986655433222 2234678
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 259 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 259 ~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.++++++|+++++...++.|.+||..+....... .....+..++++++|..+ ++......+..++...
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~-v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVY-VTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEE-EEETTTSCEEEECTTC
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEE-EEECCCCcEEEEcCCC
Confidence 8999999997777667889999999877654322 233678999999999554 4554444566666544
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=8.8e-11 Score=101.29 Aligned_cols=195 Identities=8% Similarity=0.017 Sum_probs=130.4
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEe-cCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~iwd~~~~~~~ 179 (350)
....+.+. +++..++...++.|.+||..+ ++....+. .......+++++++ +++++. .++.|.+||.......
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t--~~~~~~i~--~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINT--FKEVGRIT--GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTT--CCEEEEEE--CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcc--cEEEEEcC--CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEE
Confidence 35667774 345555555679999999854 55555553 34678999999996 666555 5799999998743322
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe--CCCeEEEEeCCCCCceeeeecCCCe
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY--ESSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~--d~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
..+..+. ..+. ......+++ ++..++.+.. + +.|.++|..+++...........
T Consensus 119 ~~i~~g~--------------------~~~~-~~~p~~i~~--~~~~lyv~~~~~~-~~v~viD~~t~~~~~~i~~g~~p 174 (328)
T 3dsm_A 119 GYIECPD--------------------MDME-SGSTEQMVQ--YGKYVYVNCWSYQ-NRILKIDTETDKVVDELTIGIQP 174 (328)
T ss_dssp EEEECTT--------------------CCTT-TCBCCCEEE--ETTEEEEEECTTC-CEEEEEETTTTEEEEEEECSSCB
T ss_pred EEEEcCC--------------------cccc-CCCcceEEE--ECCEEEEEcCCCC-CEEEEEECCCCeEEEEEEcCCCc
Confidence 2211110 0000 014566777 4555555553 5 59999999998766544444556
Q ss_pred EEEEEcCCCCEEEEEecC----------CeEEEEeCCCCceeccccC--CCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 258 SILKWSPTGDYFFAAKFD----------GTFYLWETNTWTSEPWSST--SGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
..++++|+|++++++..+ +.|.++|..+++....... ......++|+|+++.|+++.. .++.++.
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~ 251 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPV 251 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEET
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEEC
Confidence 789999999977766554 7899999999887533222 346899999999999988754 5677776
Q ss_pred CCC
Q 018806 326 ASK 328 (350)
Q Consensus 326 ~~~ 328 (350)
...
T Consensus 252 ~t~ 254 (328)
T 3dsm_A 252 EAD 254 (328)
T ss_dssp TCS
T ss_pred CCC
Confidence 543
No 193
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=1.7e-10 Score=98.09 Aligned_cols=186 Identities=12% Similarity=0.055 Sum_probs=122.0
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC---CCCCeeEEEEeeCCCeEEEEecC---------Cc
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD---SQRDVKVLEWRPNGGRSLSVGCK---------GG 167 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d---------~~ 167 (350)
..+.+++++++|+++++ . ++.|.+||.+. ++........ ....+..++++|+|+.+++.... ..
T Consensus 54 ~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~--g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 54 APVSSVALRQSGGYVAT-I-GTKFCALNWKE--QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp SCEEEEEEBTTSSEEEE-E-TTEEEEEETTT--TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CceEEEEECCCCCEEEE-E-CCeEEEEECCC--CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 35899999999996554 4 56788999853 3322222111 12357889999997755543222 23
Q ss_pred EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC--CCC
Q 018806 168 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDV--AQG 245 (350)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~--~~~ 245 (350)
..||.+...+....+. .. ......++|+|+++.|+.+....+.|.+|++ .++
T Consensus 130 ~~l~~~d~~g~~~~~~-------------------------~~-~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G 183 (297)
T 3g4e_A 130 GALYSLFPDHHVKKYF-------------------------DQ-VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG 183 (297)
T ss_dssp EEEEEECTTSCEEEEE-------------------------EE-ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTC
T ss_pred cEEEEEECCCCEEEEe-------------------------ec-cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCC
Confidence 4566555322211111 11 1356789999999988766554369999987 455
Q ss_pred Cce--e-ee---ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec-cccCCCCeEEEEEc-CCCCEEEEEEC
Q 018806 246 LGT--P-IR---RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WSSTSGFVTGATWD-PEGRMILLAFA 315 (350)
Q Consensus 246 ~~~--~-~~---~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~v~~~~~s-~~g~~l~~~~~ 315 (350)
... . +. ...+....++++++|++.++...++.|..||.++++... +......+++++|. |+++.|++++.
T Consensus 184 ~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 184 QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred cccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 432 1 11 123567889999999877777778899999999888743 33445679999998 89998888763
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.35 E-value=1.2e-09 Score=100.77 Aligned_cols=211 Identities=9% Similarity=-0.047 Sum_probs=139.3
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEe----eCCCeEEEEec-CCcEEEEec
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWR----PNGGRSLSVGC-KGGICIWAP 173 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~~~-d~~v~iwd~ 173 (350)
+..+..+.|||||+++++++.++.|.+||+...+.+....+.. ......++|+ |||++++++.. ++++.|+|.
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 3467899999999999999999999999985223555555532 3346899999 69888888777 499999998
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee--e
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI--R 251 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~--~ 251 (350)
.+.+....+...... .+....|....+..+..++++..++....+.|.|.++|........+ .
T Consensus 274 ~t~~~~~~i~~~~~~---------------~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 274 ETLEPKKIQSTRGMT---------------YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp TTCCEEEEEECCEEC---------------TTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE
T ss_pred CCCcEEEEEeccccc---------------cccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee
Confidence 754433332221000 00000121236788999998887777666668999999987643322 2
Q ss_pred ecCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccc------cCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEE
Q 018806 252 RGFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWS------STSGFVTGATWDPEGRMILLAF-AGSLTLGSI 323 (350)
Q Consensus 252 ~~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~------~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~ 323 (350)
........+.|+|+|++++++. .++.|.++|+.+++..... .|.+.-..+ ++|++..+.++. -++..+..+
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEE
T ss_pred eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEe
Confidence 2345577889999999987665 5789999999999874322 222212222 588866555443 344456666
Q ss_pred EeCC
Q 018806 324 HFAS 327 (350)
Q Consensus 324 ~~~~ 327 (350)
+...
T Consensus 418 d~~~ 421 (567)
T 1qks_A 418 GTDP 421 (567)
T ss_dssp ECCT
T ss_pred cCCC
Confidence 6543
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=5.7e-11 Score=113.89 Aligned_cols=191 Identities=9% Similarity=0.003 Sum_probs=125.5
Q ss_pred ecCCCEEEEEECCCe---EEEEEccCC---CCCceeE-----ecCCCCCCeeEEEEeeCCCeEEEEecC-----CcEEEE
Q 018806 108 HQHKHIVAFISGSTQ---VIVRDYEDS---EGKDACI-----LTSDSQRDVKVLEWRPNGGRSLSVGCK-----GGICIW 171 (350)
Q Consensus 108 sp~g~~la~~s~d~~---i~iw~~~~~---~~~~~~~-----~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~iw 171 (350)
+|+|++++....++. -.+|..+.. .+..... +..+|...+..++|||||++++++..+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389999998765543 556766533 2332222 122333468899999999988887664 359999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC-------------eEE
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS-------------SFT 238 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g-------------~i~ 238 (350)
|+..+..... .+ + ...+..++|+|| +.|++++.+.. .|+
T Consensus 195 dl~tg~~~~~------------------------~~--~-~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 195 GVADGKPLAD------------------------EL--K-WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp ETTTCCEEEE------------------------EE--E-EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEE
T ss_pred ECCCCCCCCc------------------------cC--C-CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEE
Confidence 9984432110 00 0 112467899999 99998886632 389
Q ss_pred EEeCCCCCc--eeeeecC---CCeEEEEEcCCCCEEEEEecCC-----eEEEEeCCCC--c-eeccccCCCCeEEEEEcC
Q 018806 239 IWDVAQGLG--TPIRRGF---GGLSILKWSPTGDYFFAAKFDG-----TFYLWETNTW--T-SEPWSSTSGFVTGATWDP 305 (350)
Q Consensus 239 iwd~~~~~~--~~~~~~~---~~v~~~~~sp~g~~l~~~~~d~-----~v~iwd~~~~--~-~~~~~~~~~~v~~~~~s~ 305 (350)
+|++.++.. ..+.... ..+..+.|+|||++|+..+.++ .|++||+.++ + ...+..+...+.... +|
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~ 325 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG 325 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-ec
Confidence 999987763 2233222 3588999999999998776543 8999999887 5 555555555555554 48
Q ss_pred CCCEEEEEECC---CeEEEEEEeCC
Q 018806 306 EGRMILLAFAG---SLTLGSIHFAS 327 (350)
Q Consensus 306 ~g~~l~~~~~~---~~~~~~~~~~~ 327 (350)
+|+.|++.++. ...++.+++..
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSS
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99999888743 35677777654
No 196
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=8.8e-11 Score=111.66 Aligned_cols=197 Identities=10% Similarity=0.091 Sum_probs=128.5
Q ss_pred cCeeEEEEecCCCEEEEEEC-----CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC--------
Q 018806 100 VDLQGVSWHQHKHIVAFISG-----STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG-------- 166 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-------- 166 (350)
..+.+++|||||++||.+.. ...|++||+.+ ++...... +......++|+ ||+.|+++..+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t--g~~~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES--KQPLETPL--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT--CSEEEEEE--EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC--CCCCcccc--CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35889999999999997542 25788999864 44333221 11113678999 999999988774
Q ss_pred -----cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccC-CCCCceeeEEECCCCCeEEEEEeCC---CeE
Q 018806 167 -----GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS-QNGEQITALSWGPDGRYLASASYES---SSF 237 (350)
Q Consensus 167 -----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~d~---g~i 237 (350)
.|++|++......... +..... + .....++.|+|||++|+...... ..|
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~---------------------v~~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRL---------------------VFGAIPAQ-HHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEE---------------------EESCSGGG-CCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred cCCCcEEEEEECCCCcccceE---------------------EEecCCCC-CeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 3888887744321111 111122 2 23567899999999987665421 389
Q ss_pred EEEeCCCC--CceeeeecCCCeEEEEEcCCCCEEEEEe-cC---CeEEEEeCCCCce---eccccCCCCeEEEEEcCCCC
Q 018806 238 TIWDVAQG--LGTPIRRGFGGLSILKWSPTGDYFFAAK-FD---GTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGR 308 (350)
Q Consensus 238 ~iwd~~~~--~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d---~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~ 308 (350)
+++|+.++ ....+..+....... |+++|..|+..+ .+ +.|..+|+.+++. ..+..+...+. .|+++++
T Consensus 262 ~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~ 338 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSG 338 (693)
T ss_dssp EEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETT
T ss_pred EEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECC
Confidence 99999876 345555555555554 677777665444 33 5899999998765 45556655554 8999999
Q ss_pred EEEEEE--CCCeEEEEEEeC
Q 018806 309 MILLAF--AGSLTLGSIHFA 326 (350)
Q Consensus 309 ~l~~~~--~~~~~~~~~~~~ 326 (350)
+|++.. ++...++.+++.
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EEEEEEEETTEEEEEEECTT
T ss_pred EEEEEEEECCeeEEEEEECC
Confidence 998876 333456666544
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=4.1e-10 Score=96.11 Aligned_cols=196 Identities=9% Similarity=0.072 Sum_probs=126.2
Q ss_pred cCeeEEEEecC-CCEEEEEECCCeEEEEEccCCCCCceeE-ecC--C-CCCCeeEEEEeeCCCeEEEEecC---------
Q 018806 100 VDLQGVSWHQH-KHIVAFISGSTQVIVRDYEDSEGKDACI-LTS--D-SQRDVKVLEWRPNGGRSLSVGCK--------- 165 (350)
Q Consensus 100 ~~V~~v~~sp~-g~~la~~s~d~~i~iw~~~~~~~~~~~~-~~~--~-~~~~v~~~~~sp~~~~l~~~~~d--------- 165 (350)
..+.+++++++ |+++++ +..+.|.+|+.+ ++.... ... . ....+.+++++++|..+++...+
T Consensus 71 ~~~~~i~~~~~~g~l~v~-~~~~~l~~~d~~---g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVA-DMRLGLLVVQTD---GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CCEEEEEECSSSSEEEEE-ETTTEEEEEETT---SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCceEEEecCCCcEEEE-ECCCCEEEEeCC---CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 35889999999 765544 445578888874 332221 111 1 12358899999997655554433
Q ss_pred ------CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEEC----CCCCeEEEEEeCCC
Q 018806 166 ------GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG----PDGRYLASASYESS 235 (350)
Q Consensus 166 ------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----p~g~~l~~~~~d~g 235 (350)
+.|..|+.. +....+ ..+. .....++|+ |+++.|+.+...++
T Consensus 147 ~~~~~~~~l~~~~~~--g~~~~~-------------------------~~~~-~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD--GQMIQV-------------------------DTAF-QFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp TTSSSCEEEEEECTT--SCEEEE-------------------------EEEE-SSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred cccCCCCeEEEECCC--CCEEEe-------------------------ccCC-CCcceEEEecccCCCCCEEEEEECCCC
Confidence 345555433 211110 0111 346788999 99987766654336
Q ss_pred eEEEEeCC-CCCce---eee---ecC-CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCeEEEEEcCC
Q 018806 236 SFTIWDVA-QGLGT---PIR---RGF-GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPE 306 (350)
Q Consensus 236 ~i~iwd~~-~~~~~---~~~---~~~-~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v~~~~~s~~ 306 (350)
.|.+||.. .+... ... .+. ..+..++++++|+++++...++.|.+||.++++.. .+..+...+.+++|+++
T Consensus 199 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 199 KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTT
T ss_pred eEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCC
Confidence 99999986 34321 111 122 55788999999998888778899999999866653 33344567899999999
Q ss_pred CCEEEEEECCCeEEEEEEeCC
Q 018806 307 GRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 307 g~~l~~~~~~~~~~~~~~~~~ 327 (350)
|+.|+++......++.++...
T Consensus 279 g~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 279 TKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEeCCCCeEEEEeCCC
Confidence 998887876655677777653
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.34 E-value=1.4e-10 Score=97.43 Aligned_cols=183 Identities=10% Similarity=0.058 Sum_probs=127.5
Q ss_pred CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccc
Q 018806 110 HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASF 189 (350)
Q Consensus 110 ~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 189 (350)
.+++|++++.++.|.+||.+ +++..-.+.......+.++.++|+|+.++ +.++.|..||.. ++....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~--tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~-G~~~W~-------- 70 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD--TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRD-GRELWN-------- 70 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT--TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTT-SCEEEE--------
T ss_pred CCcEEEeeCCCCEEEEEECC--CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCC-CCEEEE--------
Confidence 46789999999999999984 37666655432224689999999976555 457889999873 432211
Q ss_pred cceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe-CCCeEEEEeCCCCCceeeee-------cCCCeEEEE
Q 018806 190 LGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY-ESSSFTIWDVAQGLGTPIRR-------GFGGLSILK 261 (350)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~g~i~iwd~~~~~~~~~~~-------~~~~v~~~~ 261 (350)
+..+....+.++.+.++|+.+++.+. + +.|..+|. +++...... +......++
T Consensus 71 -----------------~~~~~~~~~~~~~~~~dG~~lv~~~~~~-~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 71 -----------------IAAPAGCEMQTARILPDGNALVAWCGHP-STILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp -----------------EECCTTCEEEEEEECTTSCEEEEEESTT-EEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred -----------------EcCCCCccccccEECCCCCEEEEecCCC-CEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 22221246788999999999998877 5 58888886 454432221 112345567
Q ss_pred EcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 262 WSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 262 ~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+.++|+++++...++.|..||.+ |+..........+.++...++|+.++++.++. ++..++..
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~-~v~~~d~~ 194 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAH-CFVQLNLE 194 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTS-EEEEECTT
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCC-eEEEEeCc
Confidence 89999999999999999999998 77754443345567788899999888766543 45555544
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.30 E-value=8.3e-10 Score=92.60 Aligned_cols=186 Identities=12% Similarity=0.027 Sum_probs=132.0
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~ 179 (350)
.+.++.++|+|++|+ +.++.|..||.+ ++.+-.+..+....+.++.+.++|+.+++.+. ++.+..+|.. ++..
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~~---G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l 111 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITRD---GRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVL 111 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECTT---SCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECCC---CCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEE
Confidence 478899999999888 457778888872 66555554333457889999999888877766 5666666643 2221
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEE
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSI 259 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~ 259 (350)
..+.. ......++ .....+++.++|+++++...+ +.|..||.+ ++..........+.+
T Consensus 112 ~~~~~-------------------~~~~~~~~-~~~~~v~~~~~G~~lv~~~~~-~~v~~~d~~-G~~~w~~~~~~~~~~ 169 (276)
T 3no2_A 112 SKTEF-------------------ETGIERPH-AQFRQINKNKKGNYLVPLFAT-SEVREIAPN-GQLLNSVKLSGTPFS 169 (276)
T ss_dssp EEEEE-------------------CCSCSSGG-GSCSCCEECTTSCEEEEETTT-TEEEEECTT-SCEEEEEECSSCCCE
T ss_pred EEEec-------------------cCCCCccc-ccccCceECCCCCEEEEecCC-CEEEEECCC-CCEEEEEECCCCccc
Confidence 11110 00011222 245667889999999988777 699999998 877766655566777
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-c------CCCCeEEEEEcCCCCEEEEEE
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-S------TSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~-~------~~~~v~~~~~s~~g~~l~~~~ 314 (350)
+...++|+.++++..++.|..+|.++++..... . ....+..++..++|..+++..
T Consensus 170 ~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 170 SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 888999999998888889999999988874222 1 123378889999999988775
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=1.5e-10 Score=102.33 Aligned_cols=222 Identities=11% Similarity=-0.048 Sum_probs=145.4
Q ss_pred EEEEecCCCEEEEEE----------CCCeEEEEEccCCCCCceeEecCC------CCCCeeEEEEeeCCCeEEEEec--C
Q 018806 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSEGKDACILTSD------SQRDVKVLEWRPNGGRSLSVGC--K 165 (350)
Q Consensus 104 ~v~~sp~g~~la~~s----------~d~~i~iw~~~~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~~~~~--d 165 (350)
.++++|||++|+++. .++.|.++|..+ .+....+..+ .......+.|+|||++++++.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t--~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT--FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC--CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCC
Confidence 899999999888876 367899999854 5544444322 1234578899999988888764 4
Q ss_pred CcEEEEecCCCCCCceeecccc---cc---cceecCCCCCceEEeeeccCCCC------------Cc-eeeEEECCCCCe
Q 018806 166 GGICIWAPSYPGNAASVRSGAA---SF---LGALSRGPGTRWTLVDFLRSQNG------------EQ-ITALSWGPDGRY 226 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~------------~~-v~~~~~sp~g~~ 226 (350)
+.|.+.|+...+....+..... .+ ..-+..+.++++..+.. ...+- .. ...+.+.++++.
T Consensus 200 ~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 200 PAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred CeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 8899999986665555543221 00 11134445555444433 11100 01 123567999988
Q ss_pred EEEEEeCCCeEEEEeCCCCCceeeee-------------cCCCeEEEEEcCCCCEEEEEec----------CCeEEEEeC
Q 018806 227 LASASYESSSFTIWDVAQGLGTPIRR-------------GFGGLSILKWSPTGDYFFAAKF----------DGTFYLWET 283 (350)
Q Consensus 227 l~~~~~d~g~i~iwd~~~~~~~~~~~-------------~~~~v~~~~~sp~g~~l~~~~~----------d~~v~iwd~ 283 (350)
++..+.. |.+.+.|........+.. .......++++|+++.+++... ++.|.++|.
T Consensus 279 ~~~~s~~-g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 279 LVWPTYT-GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEBTT-SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEeCC-CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 8888777 699999987654221110 0122233789999998776642 357999999
Q ss_pred CCCceeccccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEEeCCCC
Q 018806 284 NTWTSEPWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 284 ~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~~~~~~~~~ 329 (350)
.+.+......-.....+++|+|||+ +++++...+..+..++.....
T Consensus 358 ~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 358 ETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 9999855443344689999999999 888877566778888876544
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.28 E-value=4.2e-10 Score=97.82 Aligned_cols=222 Identities=11% Similarity=0.003 Sum_probs=141.1
Q ss_pred EEEEecCCCEEEEEE----------CCCeEEEEEccCCCCCceeEecCCC------CCCeeEEEEeeCCCeEEEEec--C
Q 018806 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSEGKDACILTSDS------QRDVKVLEWRPNGGRSLSVGC--K 165 (350)
Q Consensus 104 ~v~~sp~g~~la~~s----------~d~~i~iw~~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~~--d 165 (350)
.+++||||++|++++ .++.|.+||..+ .+....+..+. ......++|+|||++++++.. +
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t--~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT--LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 399999999888775 367899999864 55444443221 235678999999988887764 5
Q ss_pred CcEEEEecCCCCCCceeeccccc---ccc---eecCCCCCceEEeeecc---------CCC---CCce-eeEEEC-CCCC
Q 018806 166 GGICIWAPSYPGNAASVRSGAAS---FLG---ALSRGPGTRWTLVDFLR---------SQN---GEQI-TALSWG-PDGR 225 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~---------~~~---~~~v-~~~~~s-p~g~ 225 (350)
+.|.++|+...+....+...... +.+ -+..+.++++..+..-. ... ...+ ....|. ++|+
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred CeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 89999999976665555432110 111 12334455443332111 000 0111 124553 5775
Q ss_pred eEEEEEeCCCeEEEEeCCCCCceeeee-------------cCCCeEEEEEcCCCCEEEEEec----------CCeEEEEe
Q 018806 226 YLASASYESSSFTIWDVAQGLGTPIRR-------------GFGGLSILKWSPTGDYFFAAKF----------DGTFYLWE 282 (350)
Q Consensus 226 ~l~~~~~d~g~i~iwd~~~~~~~~~~~-------------~~~~v~~~~~sp~g~~l~~~~~----------d~~v~iwd 282 (350)
.++ .+.+ |+|++.|+.+........ ..+....++++++++.+++... .+.|.++|
T Consensus 240 ~~~-vs~~-g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 240 LVW-PTYT-GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp EEE-EBTT-SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred EEE-EeCC-CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 544 5556 799999998764321110 1233445788999998877643 25799999
Q ss_pred CCCCceeccccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEEeCCCC
Q 018806 283 TNTWTSEPWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~~~~~~~~~ 329 (350)
+++++......-...++++++++|++ +|+++...+..+..++....+
T Consensus 318 ~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 318 AKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 99999865544445789999999997 777777666677778776543
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=1.3e-09 Score=96.79 Aligned_cols=196 Identities=15% Similarity=0.182 Sum_probs=126.8
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC--cEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG--GICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~v~iwd~~~~~~ 178 (350)
....|+|+++++++++...++.|++||.+. +...... .. ..... ++|+|+++.++++..++ .|.+++......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~--g~~~~~~-~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD--NKVTTVH-PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTT--TEEEEEE-ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCC--CEEEEee-cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 588999999999777766778999999853 3332222 22 22334 99999988777777754 788887753221
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee----eecC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI----RRGF 254 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~----~~~~ 254 (350)
...+ ..+..+....+.+++++|++..|+.+..+ +.|+.||..++....+ ....
T Consensus 207 ~~~~----------------------g~~~~~~~~~p~~iav~p~~g~lyv~d~~-~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 207 PTRI----------------------GQLGSTFSGKIGAVALDETEEWLYFVDSN-KNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEEE----------------------EECCTTSCSCCCBCEECTTSSEEEEECTT-CEEEEEETTTCCEEEEEECCCCSC
T ss_pred eEEe----------------------eeccchhcCCcEEEEEeCCCCeEEEEECC-CcEEEEECCCCCEEEEecccccCC
Confidence 1111 11111122567899999965566666555 6999999988764433 1111
Q ss_pred -CCe-E-EEEEcCC-CCEEEEEecCCeEEEEeCCCCceeccccC---------------CCCeEEEEEcCCCCEEEEEEC
Q 018806 255 -GGL-S-ILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEPWSST---------------SGFVTGATWDPEGRMILLAFA 315 (350)
Q Consensus 255 -~~v-~-~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~~~~~~~---------------~~~v~~~~~s~~g~~l~~~~~ 315 (350)
... . .++|+|+ +.++++-..++.|+.|+.... ...+.++ -.....++++++|+ |+++..
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~ 341 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDG 341 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEET
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeC
Confidence 122 3 8999996 555555566789999997653 3333222 23578999999999 555665
Q ss_pred -CCeEEEEEEeC
Q 018806 316 -GSLTLGSIHFA 326 (350)
Q Consensus 316 -~~~~~~~~~~~ 326 (350)
....+..++..
T Consensus 342 ~~~~~I~~~~~~ 353 (409)
T 3hrp_A 342 FKGYCLRKLDIL 353 (409)
T ss_dssp TTTCEEEEEETT
T ss_pred CCCCEEEEEECC
Confidence 66678887743
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=1.4e-09 Score=93.59 Aligned_cols=184 Identities=12% Similarity=0.093 Sum_probs=117.5
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC---CCCCeeEEEEeeCCCeEEEEecC----CcEEEEe
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD---SQRDVKVLEWRPNGGRSLSVGCK----GGICIWA 172 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d----~~v~iwd 172 (350)
..+.+++|+++|+++++. .+ .|.+||... ++........ ....+.+++++|+|+.+++...+ ....||.
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTAT--GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTT--CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCC--CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 368999999999877754 44 488888753 4332222111 12358899999997655443321 2344444
Q ss_pred cCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCC--CC-Cc--
Q 018806 173 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVA--QG-LG-- 247 (350)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~--~~-~~-- 247 (350)
+. .+....+ ... ......++|+|+|+.++.+...++.|.+||+. ++ ..
T Consensus 166 ~~-~g~~~~~-------------------------~~~-~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~ 218 (326)
T 2ghs_A 166 VA-KGKVTKL-------------------------FAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK 218 (326)
T ss_dssp EE-TTEEEEE-------------------------EEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC
T ss_pred Ee-CCcEEEe-------------------------eCC-CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC
Confidence 43 2221111 011 13467899999999887765443699999986 55 32
Q ss_pred -eeeee---cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccccCCCCeEEEEEc-CCCCEEEEEEC
Q 018806 248 -TPIRR---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWD-PEGRMILLAFA 315 (350)
Q Consensus 248 -~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~s-~~g~~l~~~~~ 315 (350)
..+.. ....+..++++++|.+.++...++.|.+||.. ++. ..+......+++++|+ ++++.|++++.
T Consensus 219 ~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 219 AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 11211 23456789999999877776667899999984 554 3444445579999998 89988877763
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.26 E-value=5.3e-09 Score=88.35 Aligned_cols=193 Identities=9% Similarity=-0.008 Sum_probs=130.1
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..+.+++++++|++.++...++.|..|+.+ +.............+..+++.++|..+++...++.|.+||.. ...
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~- 131 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK---GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKI- 131 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC---CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCE-
Confidence 468899999999987776668889899874 332222111245578999999986555544456889999873 221
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--ecCCCe
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGL 257 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~--~~~~~v 257 (350)
..+ ..... ...+..++++++|+.+++.... +.|..||. +++...+. .....+
T Consensus 132 ~~~-----------------------~~~~~-~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 132 REY-----------------------ELPNK-GSYPSFITLGSDNALWFTENQN-NAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp EEE-----------------------ECSST-TCCEEEEEECTTSCEEEEETTT-TEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEe-----------------------cCCCC-CCCCceEEEcCCCCEEEEeCCC-CEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 110 01111 2468899999999776665555 59999998 66554432 234568
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceecc--ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
..++++++|++.++...++.|.+||. +++...+ ......+.+++++++|+..+ +......+..++.
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWF-TEWGANKIGRLTS 253 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE-EETTTTEEEEEET
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEE-eccCCceEEEECC
Confidence 89999999997776666889999999 6665433 23446789999999998554 5433345666665
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.25 E-value=4.7e-09 Score=88.65 Aligned_cols=193 Identities=9% Similarity=0.030 Sum_probs=131.0
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..+.+++++++|++.++...++.|.+|+.. +.........+...+.++++.++|..+++...++.|..|+.. . ..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g-~~ 89 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD---GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G-II 89 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC---CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C-cE
Confidence 458999999999977765557889999974 332222212345679999999997655554446889999865 1 11
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee--cCCCe
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR--GFGGL 257 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~--~~~~v 257 (350)
..+. +... ...+..++++++|+.+++...+ +.|..||. +++...... ....+
T Consensus 90 ~~~~-----------------------~~~~-~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~-~g~~~~~~~~~~~~~~ 143 (299)
T 2z2n_A 90 KEYT-----------------------LPNP-DSAPYGITEGPNGDIWFTEMNG-NRIGRITD-DGKIREYELPNKGSYP 143 (299)
T ss_dssp EEEE-----------------------CSST-TCCEEEEEECTTSCEEEEETTT-TEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEEe-----------------------CCCc-CCCceeeEECCCCCEEEEecCC-ceEEEECC-CCCEEEecCCCCCCCC
Confidence 1110 1111 2478899999999877766556 59999998 555443322 33568
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceecc--ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
..++++++|+..++...++.|..||. +++...+ ......+..++++++|+..+ +......+..++.
T Consensus 144 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWF-VEIIGNKIGRITT 211 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE-EETTTTEEEEECT
T ss_pred ceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEE-EccCCceEEEECC
Confidence 89999999987777767789999999 6666443 23445688999999998555 4433345666655
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=8.7e-09 Score=91.47 Aligned_cols=196 Identities=10% Similarity=-0.045 Sum_probs=126.1
Q ss_pred EEEecCCCEEEEEECCC--eEEEEEccCCCCCceeEe---cCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 105 VSWHQHKHIVAFISGST--QVIVRDYEDSEGKDACIL---TSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 105 v~~sp~g~~la~~s~d~--~i~iw~~~~~~~~~~~~~---~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
++|+++++.|+++..++ .|.+++... +.....+ .......+.+++++|+++.|+++..++.|+.||..... .
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~--~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~ 252 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKAS--GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-V 252 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGG--TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-E
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCC--CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-E
Confidence 89999999998887765 677777653 2222222 11144568899999965677776556889999987332 1
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCcee-eEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecC----
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQIT-ALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGF---- 254 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~---- 254 (350)
..+... ...+....... .++|+|++..|+.+...++.|+.|+.... ...+....
T Consensus 253 ~~~~~~--------------------~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g 311 (409)
T 3hrp_A 253 TLIKQL--------------------ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKT 311 (409)
T ss_dssp EEEEEC--------------------CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCS
T ss_pred EEEecc--------------------cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCC
Confidence 111000 01111111113 89999965566555544469999997654 33333221
Q ss_pred -----------CCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccccC---------------CCCeEEEEEcCCC
Q 018806 255 -----------GGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSST---------------SGFVTGATWDPEG 307 (350)
Q Consensus 255 -----------~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~~---------------~~~v~~~~~s~~g 307 (350)
.....++++++|+++++-. .++.|+.|++.+++...+.++ -.....++++++|
T Consensus 312 ~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 312 VQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp CBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred cCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 3478899999999777777 788999999888877555443 2457899999996
Q ss_pred CEEEEEECCCeEEEEEEe
Q 018806 308 RMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 308 ~~l~~~~~~~~~~~~~~~ 325 (350)
. |+++..+...+..+.+
T Consensus 392 ~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 392 G-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp E-EEEEESTTCEEEEEEE
T ss_pred C-EEEEECCCCeEEEEEe
Confidence 5 4556555556666654
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.21 E-value=4.5e-09 Score=89.63 Aligned_cols=199 Identities=9% Similarity=0.094 Sum_probs=127.0
Q ss_pred CeeEEEEecCCCEEEE-------EECCCeEEEEEccCCCCCceeEec---CCCCCCeeEEEEeeCCCeEEEEecCCcEEE
Q 018806 101 DLQGVSWHQHKHIVAF-------ISGSTQVIVRDYEDSEGKDACILT---SDSQRDVKVLEWRPNGGRSLSVGCKGGICI 170 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~-------~s~d~~i~iw~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i 170 (350)
...+++|+++|+++++ ...++.|.+|+... ++...... .++...+..+++++++..++++...+.|.+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 3578999999988777 56788899998743 33322211 124467899999998445555555567888
Q ss_pred EecCCCCCCcee-ecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC--------------CC
Q 018806 171 WAPSYPGNAASV-RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE--------------SS 235 (350)
Q Consensus 171 wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--------------~g 235 (350)
||.. +. ...+ ... ..+.....+.+++++++|+.+++...+ .+
T Consensus 97 ~d~~-g~-~~~~~~~~---------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 97 VQTD-GT-FEEIAKKD---------------------SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp EETT-SC-EEECCSBC---------------------TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EeCC-CC-EEEEEecc---------------------CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 9876 32 1111 100 011112467899999999877766543 13
Q ss_pred eEEEEeCCCCCceeeeecCCCeEEEEEc----CCCCEEEEE-ecCCeEEEEeCC-CCcee------ccccCC-CCeEEEE
Q 018806 236 SFTIWDVAQGLGTPIRRGFGGLSILKWS----PTGDYFFAA-KFDGTFYLWETN-TWTSE------PWSSTS-GFVTGAT 302 (350)
Q Consensus 236 ~i~iwd~~~~~~~~~~~~~~~v~~~~~s----p~g~~l~~~-~~d~~v~iwd~~-~~~~~------~~~~~~-~~v~~~~ 302 (350)
.|..||.. ++...+..+......++|+ |+|+.|+.+ ..++.|++||.+ +++.. .+..+. ..+..++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred eEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 67888776 5544444444567889999 999776555 467899999986 44421 122232 5678999
Q ss_pred EcCCCCEEEEEECCCeEEEEEEeC
Q 018806 303 WDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 303 ~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
++++|+++++.... ..+..++..
T Consensus 233 ~d~~G~l~v~~~~~-~~i~~~d~~ 255 (314)
T 1pjx_A 233 FDEDNNLLVANWGS-SHIEVFGPD 255 (314)
T ss_dssp EBTTCCEEEEEETT-TEEEEECTT
T ss_pred ECCCCCEEEEEcCC-CEEEEEcCC
Confidence 99999877755432 345555544
No 208
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.18 E-value=2.2e-08 Score=82.46 Aligned_cols=194 Identities=15% Similarity=0.055 Sum_probs=128.2
Q ss_pred eeEEEEecCCCEEEEEEC--CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 102 LQGVSWHQHKHIVAFISG--STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~--d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
...++|++++.+.++.+. ++.|++.|+.+ ++....+..+.......+++ ++++++.+.. ++.+.++|....+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~t--g~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQT--GKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTT--CCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCC--CCEEEEEecCCCcceEEEEE--eCCEEEEEEecCCEEEEEECCCCcE
Confidence 578999998754444333 57899999854 66555543222222234444 4567766666 59999999874332
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee---cC-
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR---GF- 254 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~---~~- 254 (350)
. ..+.... . ....+++||+.++.+..+ ++|.++|..+.+...... ..
T Consensus 99 ~-------------------------~~i~~g~-~--~g~glt~Dg~~l~vs~gs-~~l~viD~~t~~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 99 I-------------------------KNFTHQM-K--DGWGLATDGKILYGSDGT-SILYEIDPHTFKLIKKHNVKYNGH 149 (266)
T ss_dssp E-------------------------EEEECCS-S--SCCEEEECSSSEEEECSS-SEEEEECTTTCCEEEEEECEETTE
T ss_pred E-------------------------EEEECCC-C--CeEEEEECCCEEEEECCC-CeEEEEECCCCcEEEEEEECCCCc
Confidence 2 2222110 1 123456688888877766 699999999877554322 11
Q ss_pred --CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccC--------------CCCeEEEEEcCCCCEEEEEECCCe
Q 018806 255 --GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSST--------------SGFVTGATWDPEGRMILLAFAGSL 318 (350)
Q Consensus 255 --~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------------~~~v~~~~~s~~g~~l~~~~~~~~ 318 (350)
..+..+.|. +|+..+....++.|.+.|..+++....... ......++|+|+++.+++++....
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 236678888 775555555678999999999997432211 135689999999999999987778
Q ss_pred EEEEEEeCCCC
Q 018806 319 TLGSIHFASKP 329 (350)
Q Consensus 319 ~~~~~~~~~~~ 329 (350)
.++.+++...+
T Consensus 229 ~v~~i~l~~~~ 239 (266)
T 2iwa_A 229 KLFEIKLHLVR 239 (266)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEeccc
Confidence 89999987654
No 209
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.15 E-value=6.1e-09 Score=88.17 Aligned_cols=154 Identities=10% Similarity=0.068 Sum_probs=108.4
Q ss_pred CCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEE
Q 018806 142 DSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW 220 (350)
Q Consensus 142 ~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 220 (350)
.+.....+++|+|+|+.++.++. ++.|..|+.... ... +..+ ...+.++++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~-------------------------~~~~-~~~~~~l~~ 76 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP-------------------------EMHP-SHHQNGHCL 76 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE-------------------------EESS-CSSEEEEEE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE-------------------------EECC-CCCcceeeE
Confidence 34556789999999875555554 699999998732 111 1122 257899999
Q ss_pred CCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec-----CCCeEEEEEcCCCCEEEEE----e-------------cCCeE
Q 018806 221 GPDGRYLASASYESSSFTIWDVAQGLGTPIRRG-----FGGLSILKWSPTGDYFFAA----K-------------FDGTF 278 (350)
Q Consensus 221 sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~-----~~~v~~~~~sp~g~~l~~~----~-------------~d~~v 278 (350)
+|+|+.+++...+ +.|.+||..+++...+... ...+..++++|+|+++++. . ..+.|
T Consensus 77 ~~dg~l~v~~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 77 NKQGHLIACSHGL-RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp CTTCCEEEEETTT-TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred CCCCcEEEEecCC-CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 9999977766556 5999999988876544321 1345679999999988873 2 13467
Q ss_pred EEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 279 YLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 279 ~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+.++.. ++...+..+......++|+|+|+.| ++......++.+++.
T Consensus 156 ~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 156 FRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLN 201 (296)
T ss_dssp EEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEEC
T ss_pred EEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEEC
Confidence 777766 5655555666678999999999999 666555567777664
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=3.6e-09 Score=90.10 Aligned_cols=182 Identities=11% Similarity=0.019 Sum_probs=118.4
Q ss_pred CeeEEEEecCCC-EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~-~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
...++.|+|+|+ ++++...++.|..|+.. +.. ..+ ..+...+..++++++|+ ++++.. ++.|.+|+.. +.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~---g~~-~~~-~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~- 117 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED---GTV-DVL-LDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQ- 117 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT---SCE-EEE-EESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC-
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC---CCE-EEE-eCCCCccceeeECCCCC-EEEEECCCCEEEEECCC-CC-
Confidence 367899999998 45555567889999863 332 222 23456789999999976 444444 5789999865 22
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEE----EEe------------CCCeEEEEeC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLAS----ASY------------ESSSFTIWDV 242 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~----~~~------------d~g~i~iwd~ 242 (350)
...+. ....+.....+.+++++|+|+.+++ +.. ..+.|..||.
T Consensus 118 ~~~~~---------------------~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 118 AHLLV---------------------GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEEEE---------------------CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEEEE---------------------eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 11111 1111111245788999999987775 221 1146888888
Q ss_pred CCCCceeeeecCCCeEEEEEcCCCCEEEEEecC------CeEEEEeCCCCcee---ccc-cCCCCeEEEEEcCCCCEEEE
Q 018806 243 AQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD------GTFYLWETNTWTSE---PWS-STSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 243 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d------~~v~iwd~~~~~~~---~~~-~~~~~v~~~~~s~~g~~l~~ 312 (350)
.+++...+. .......++|+|||+.|+.+... +.|++|++..+... .+. ........++++++|++.++
T Consensus 177 ~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 177 DGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp SSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC
T ss_pred CCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe
Confidence 777765554 44567889999999988777665 78999998765421 111 12334567899999995443
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=5.7e-08 Score=81.96 Aligned_cols=193 Identities=10% Similarity=-0.015 Sum_probs=127.3
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..+.+++++++|++.++...++.|..++.. ++............+..+++.++|..+++...++.|..++.. ...
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~- 136 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK---GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI- 136 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT---SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC---CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-
Confidence 458899999999977766567888888874 332222222234678999999986655544446888888865 221
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--ecCCCe
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGL 257 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~--~~~~~v 257 (350)
..+ .+... ...+..+++.++|+.+++.... +.|..||. +++...+. .....+
T Consensus 137 ~~~-----------------------~~~~~-~~~~~~i~~d~~g~l~v~~~~~-~~i~~~~~-~g~~~~~~~~~~~~~~ 190 (300)
T 2qc5_A 137 YEY-----------------------DLPNK-GSYPAFITLGSDNALWFTENQN-NSIGRITN-TGKLEEYPLPTNAAAP 190 (300)
T ss_dssp EEE-----------------------ECSST-TCCEEEEEECTTSSEEEEETTT-TEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEc-----------------------cCCCC-CCCceeEEECCCCCEEEEecCC-CeEEEECC-CCcEEEeeCCCCCCCc
Confidence 111 01111 2468899999999855554445 59999998 55544332 223568
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceecc--ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
..++++++|++.++....+.|.+||. +++.... ......+.+++++++|+..+ +......+..++.
T Consensus 191 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 191 VGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF-TEWGANQIGRITN 258 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE-EETTTTEEEEECT
T ss_pred ceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE-eccCCCeEEEECC
Confidence 89999999987776666778999998 5554332 23456689999999998544 5433345555554
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=7.7e-09 Score=98.31 Aligned_cols=195 Identities=12% Similarity=0.092 Sum_probs=128.5
Q ss_pred eEEEEecCCCEEEEEECCC-------------eEEEEEccCCCCCceeEecC-C-CCCCeeEEEEeeCCCeEEEEecC--
Q 018806 103 QGVSWHQHKHIVAFISGST-------------QVIVRDYEDSEGKDACILTS-D-SQRDVKVLEWRPNGGRSLSVGCK-- 165 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~d~-------------~i~iw~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d-- 165 (350)
..++|+ ||+.|++++.+. .|++|++.+........... . |...+.++.|+|||+.++.....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 678999 999999998874 38889986543332333321 2 34457889999999888765542
Q ss_pred --CcEEEEecCCCC-CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC---CCeEEE
Q 018806 166 --GGICIWAPSYPG-NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE---SSSFTI 239 (350)
Q Consensus 166 --~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d---~g~i~i 239 (350)
+.++++|+..+. .... +..+. ...... |+++|..|+..+.. ++.|..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~-------------------------l~~~~-~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~ 309 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLT-------------------------VQGDL-DADVSL-VDNKGSTLYLLTNRDAPNRRLVT 309 (693)
T ss_dssp SCCEEEEEETTSTTCCCEE-------------------------EECSS-SSCEEE-EEEETTEEEEEECTTCTTCEEEE
T ss_pred CCcEEEEEECCCCCCceEE-------------------------EeCCC-CceEEE-EeccCCEEEEEECCCCCCCEEEE
Confidence 488999987432 1111 22222 233333 67777777766543 258999
Q ss_pred EeCCCCCc---eeeeecCCCeEEEEEcCCCCEEEEEec-CC--eEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEE
Q 018806 240 WDVAQGLG---TPIRRGFGGLSILKWSPTGDYFFAAKF-DG--TFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 240 wd~~~~~~---~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~--~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~ 312 (350)
+|+.++.. ..+..+...+. .|++++++|+.... ++ .|++||+.++....+. .....+..+.++++++.|++
T Consensus 310 ~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~ 387 (693)
T 3iuj_A 310 VDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYF 387 (693)
T ss_dssp EETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEE
T ss_pred EeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEE
Confidence 99998765 44555555554 89999998876654 44 7899999866554443 34456778888999988877
Q ss_pred EECC---CeEEEEEEeCC
Q 018806 313 AFAG---SLTLGSIHFAS 327 (350)
Q Consensus 313 ~~~~---~~~~~~~~~~~ 327 (350)
.... -..++.+++..
T Consensus 388 ~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 388 GFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEECSSSCCEEEEECTTT
T ss_pred EecCCCCCCEEEEEECCC
Confidence 6532 24677776643
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=5.8e-08 Score=83.47 Aligned_cols=192 Identities=10% Similarity=0.042 Sum_probs=118.7
Q ss_pred eeEEEEecCCCEE-EEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 102 LQGVSWHQHKHIV-AFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 102 V~~v~~sp~g~~l-a~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
..++.|+|++..+ ++...++.|..|+... +. ...+. ....+.+++|+|+|+.++ +. +..|.+||...+. ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--~~-~~~~~--~~~~v~~i~~~~dg~l~v-~~-~~gl~~~d~~~g~-~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLAS--GR-KTVHA--LPFMGSALAKISDSKQLI-AS-DDGLFLRDTATGV-LT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTT--TE-EEEEE--CSSCEEEEEEEETTEEEE-EE-TTEEEEEETTTCC-EE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCC--Cc-EEEEE--CCCcceEEEEeCCCeEEE-EE-CCCEEEEECCCCc-EE
Confidence 4678999986544 4445678899999853 32 22232 345799999999965444 44 4458889876332 11
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-----CCeEEEEeCCCCCceeeeecCC
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-----SSSFTIWDVAQGLGTPIRRGFG 255 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-----~g~i~iwd~~~~~~~~~~~~~~ 255 (350)
.+... ........+.+++++|+|+.+++...+ .+.|..++ +++...+.....
T Consensus 123 ~~~~~---------------------~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~ 179 (326)
T 2ghs_A 123 LHAEL---------------------ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS 179 (326)
T ss_dssp EEECS---------------------STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES
T ss_pred EEeeC---------------------CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc
Confidence 11100 001112468899999999876654431 13666666 454444444445
Q ss_pred CeEEEEEcCCCCEEEEE-ecCCeEEEEeCC--CC-cee---cc---ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 256 GLSILKWSPTGDYFFAA-KFDGTFYLWETN--TW-TSE---PW---SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~--~~-~~~---~~---~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
....++|+|+|+.|+.+ +.++.|++||++ ++ +.. .+ ......+..++++++|.+.++...+ ..+..++.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~-~~v~~~d~ 258 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE-GAVDRYDT 258 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT-TEEEEECT
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC-CEEEEECC
Confidence 67789999999987655 456899999986 55 421 11 1234557889999999876654332 34555544
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.11 E-value=6.4e-08 Score=81.62 Aligned_cols=193 Identities=10% Similarity=0.029 Sum_probs=129.2
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
..+.+++++++|++.++...++.|.+|+.. ++............+..+++.++|..+++...++.|..+|.. +..
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~- 94 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS---GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF- 94 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC---CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-
Confidence 358899999999977766678899999974 332222222334678999999987655544446889998876 221
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee--cCCCe
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR--GFGGL 257 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~--~~~~v 257 (350)
..+ .+... ...+.++++.++|+.+++...+ +.|..||.. ++...... ....+
T Consensus 95 ~~~-----------------------~~~~~-~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g~~~~~~~~~~~~~~ 148 (300)
T 2qc5_A 95 TEY-----------------------PLPQP-DSGPYGITEGLNGDIWFTQLNG-DRIGKLTAD-GTIYEYDLPNKGSYP 148 (300)
T ss_dssp EEE-----------------------ECSST-TCCEEEEEECSTTCEEEEETTT-TEEEEECTT-SCEEEEECSSTTCCE
T ss_pred EEe-----------------------cCCCC-CCCCccceECCCCCEEEEccCC-CeEEEECCC-CCEEEccCCCCCCCc
Confidence 111 01111 2468899999999877665556 599999987 55443322 24568
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
..+++.++|+..++...++.|..||. +++...+. .....+..++++++|+..+ +......+..++.
T Consensus 149 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWF-VEIMGNKIGRITT 216 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE-EETTTTEEEEECT
T ss_pred eeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEE-EccCCCEEEEEcC
Confidence 89999999996666666789999998 56554332 3345688999999997655 4433335555554
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.11 E-value=2.9e-08 Score=84.10 Aligned_cols=194 Identities=13% Similarity=0.111 Sum_probs=119.5
Q ss_pred eeEEEEecCCCE-EEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 102 LQGVSWHQHKHI-VAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 102 V~~v~~sp~g~~-la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
-.+..|+|++.. +++...++.|..|+... +.. ..+ .....+.+++++++|+ ++++. ++.|.+||...+. ..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~--~~~-~~~--~~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~-~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFT--KQV-QRV--TMDAPVSSVALRQSGG-YVATI-GTKFCALNWKEQS-AV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTT--CCE-EEE--ECSSCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTE-EE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCC--CcE-EEE--eCCCceEEEEECCCCC-EEEEE-CCeEEEEECCCCc-EE
Confidence 457889996554 44445678999999853 332 222 2456799999999977 44443 6788999986322 11
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC----------CCeEEEEeCCCCCceee
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE----------SSSFTIWDVAQGLGTPI 250 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d----------~g~i~iwd~~~~~~~~~ 250 (350)
.+.. .........+.+++++|+|+.+++.... .+.|+.++.. ++...+
T Consensus 87 ~~~~---------------------~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~ 144 (297)
T 3g4e_A 87 VLAT---------------------VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKY 144 (297)
T ss_dssp EEEE---------------------CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEE
T ss_pred EEEe---------------------cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEE
Confidence 1110 0111112457899999999966654332 1244444443 333334
Q ss_pred eecCCCeEEEEEcCCCCEEEEE-ecCCeEEEEeC--CCCcee---cc---ccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q 018806 251 RRGFGGLSILKWSPTGDYFFAA-KFDGTFYLWET--NTWTSE---PW---SSTSGFVTGATWDPEGRMILLAFAGSLTLG 321 (350)
Q Consensus 251 ~~~~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~--~~~~~~---~~---~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~ 321 (350)
.........++|+|+++.|+.+ +.++.|.+|++ .+++.. .+ ......+..++++++|++.++...+ ..+.
T Consensus 145 ~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-~~v~ 223 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-GRVI 223 (297)
T ss_dssp EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-TEEE
T ss_pred eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-CEEE
Confidence 4444567889999999987554 55789999987 455541 11 1233567899999999766654433 3455
Q ss_pred EEEeC
Q 018806 322 SIHFA 326 (350)
Q Consensus 322 ~~~~~ 326 (350)
.++..
T Consensus 224 ~~d~~ 228 (297)
T 3g4e_A 224 RLDPV 228 (297)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 55543
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.11 E-value=1.1e-09 Score=95.44 Aligned_cols=130 Identities=12% Similarity=0.044 Sum_probs=98.3
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
|+.++| |+++|+++ .++.|++||+.... ..... ..|...+.++.+.+. .++++..||.+.+||+...... .
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--~~~~~-~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-~ 160 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS--EFRTV-TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-Q 160 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--CEEEE-EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-E
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--ccCcc-ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-c
Confidence 999999 99999998 88999999986432 22222 346677888887765 3888888999999999833321 0
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc--e-ee------e-
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG--T-PI------R- 251 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~--~-~~------~- 251 (350)
+ ...|++++|||+| ++.+..| |++++|+...++. . .+ .
T Consensus 161 ----------------------------~-~~~Vs~v~WSpkG--~~vg~~d-g~i~~~~~~~~~~~~k~~I~~Pp~~~~ 208 (388)
T 1xip_A 161 ----------------------------L-AQNVTSFDVTNSQ--LAVLLKD-RSFQSFAWRNGEMEKQFEFSLPSELEE 208 (388)
T ss_dssp ----------------------------E-EESEEEEEECSSE--EEEEETT-SCEEEEEEETTEEEEEEEECCCHHHHT
T ss_pred ----------------------------c-cCCceEEEEcCCc--eEEEEcC-CcEEEEcCCCccccccceecCCccccc
Confidence 1 1479999999999 6777888 7999998887763 2 23 1
Q ss_pred --ecCCCeEEEEEcCCCCEEEEE
Q 018806 252 --RGFGGLSILKWSPTGDYFFAA 272 (350)
Q Consensus 252 --~~~~~v~~~~~sp~g~~l~~~ 272 (350)
.|...|.+++|.++++++++=
T Consensus 209 ~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 209 LPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCTTTSEEEEEEESSSSEEEEEE
T ss_pred ccCCCeeEEEEEEecCCeEEEEE
Confidence 256789999999999988753
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=3.3e-09 Score=90.36 Aligned_cols=189 Identities=12% Similarity=0.089 Sum_probs=116.2
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec--CC-CCCCeeEEEEeeCCCeEEEE---ec---------
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT--SD-SQRDVKVLEWRPNGGRSLSV---GC--------- 164 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~---~~--------- 164 (350)
..+.+++++++|+++++...++.|.+|+.+ +....... .+ ....+..+++.|+|..+++- +.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~---g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD---GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT---SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC---CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 358899999999977665556788888874 33222111 11 12347789999997655541 11
Q ss_pred -----CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-----C
Q 018806 165 -----KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-----S 234 (350)
Q Consensus 165 -----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-----~ 234 (350)
.+.|..+|...+ .... . . .. .....++|+||++.|+.+... .
T Consensus 163 ~~~~~~~~v~~~d~~~g-~~~~----------------------~---~-~~-~~p~gl~~spdg~~lyv~~~~~~~~~~ 214 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGS-PLQR----------------------M---A-DL-DHPNGLAFSPDEQTLYVSQTPEQGHGS 214 (305)
T ss_dssp CCSSSCEEEEEECSSSC-CCEE----------------------E---E-EE-SSEEEEEECTTSSEEEEEECCC---CC
T ss_pred ccccCCCeEEEEcCCCC-cEEE----------------------E---e-cC-CCCcceEEcCCCCEEEEEecCCcCCCC
Confidence 134555554321 1111 1 1 11 356789999999988877654 1
Q ss_pred CeEEEEeCCCCCce--eee--ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEE
Q 018806 235 SSFTIWDVAQGLGT--PIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMI 310 (350)
Q Consensus 235 g~i~iwd~~~~~~~--~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l 310 (350)
+.|.+|++..+... ... ...+....++++++|++.++ ..+ .|.+|+.+......+... ..+.+++|+++++.|
T Consensus 215 ~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~g~~~~~~~~~-~~~~~~~f~~d~~~L 291 (305)
T 3dr2_A 215 VEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSDGQLLGHIPTP-GTASNCTFDQAQQRL 291 (305)
T ss_dssp CEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTTSCEEEEEECS-SCCCEEEECTTSCEE
T ss_pred CEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCCCCEEEEEECC-CceeEEEEeCCCCEE
Confidence 48999998765311 111 12344567899999995444 444 599999854333333333 358899999999999
Q ss_pred EEEECCCeEEEEEE
Q 018806 311 LLAFAGSLTLGSIH 324 (350)
Q Consensus 311 ~~~~~~~~~~~~~~ 324 (350)
++++.+ .++.++
T Consensus 292 ~it~~~--~l~~~~ 303 (305)
T 3dr2_A 292 FITGGP--CLWMLP 303 (305)
T ss_dssp EEEETT--EEEEEE
T ss_pred EEEcCC--eEEEEE
Confidence 888764 344443
No 218
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=1.2e-08 Score=87.86 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=78.9
Q ss_pred CceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCC-ceeee----------ecCCCeEEEEEcC-CCCEEEEEe-cCCeEE
Q 018806 213 EQITALSWGPDGRYLASASYESSSFTIWDVAQGL-GTPIR----------RGFGGLSILKWSP-TGDYFFAAK-FDGTFY 279 (350)
Q Consensus 213 ~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~-~~~~~----------~~~~~v~~~~~sp-~g~~l~~~~-~d~~v~ 279 (350)
.....++++|+|+.+++...+ +.|++||..... ..... .+......++++| +|+++++.+ .++.|+
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~-~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVAL-HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTT-TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CCceEEEECCCCCEEEEECCC-CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 478899999999977766666 699999986552 22222 1223688999999 788777776 689999
Q ss_pred EEeCCCCceec-ccc----------CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 280 LWETNTWTSEP-WSS----------TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 280 iwd~~~~~~~~-~~~----------~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
+||. +++... +.. +......++++|++..|+++......+..++..
T Consensus 170 ~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 170 QFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 9994 455432 221 123478999999966677776555677777765
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.09 E-value=1.2e-08 Score=89.57 Aligned_cols=187 Identities=13% Similarity=0.061 Sum_probs=118.9
Q ss_pred CeeEEEEecCCCEEEEEECC------CeEEEEEccCCCCCceeEecCC-C-CCCeeEEEEeeCCCeEEEEe---------
Q 018806 101 DLQGVSWHQHKHIVAFISGS------TQVIVRDYEDSEGKDACILTSD-S-QRDVKVLEWRPNGGRSLSVG--------- 163 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d------~~i~iw~~~~~~~~~~~~~~~~-~-~~~v~~~~~sp~~~~l~~~~--------- 163 (350)
.-..+.++|+| +++++..+ +.+.++|..+ .+.+..+..+ . ..--..+.|+|+++.++++.
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T--~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS--FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT--CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC--CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 34567888999 66665554 6888888753 5555555322 1 12345688899987666663
Q ss_pred ----------cCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEE--CCCCCeEEEEE
Q 018806 164 ----------CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW--GPDGRYLASAS 231 (350)
Q Consensus 164 ----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~g~~l~~~~ 231 (350)
..++|.+||+...+....+..+ ........+.| +|++++++.++
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg------------------------~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG------------------------EENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESC------------------------TTEEEEEEEEECSSTTCCEEEEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecC------------------------CCCCccceeEeeECCCCCEEEEEE
Confidence 2589999999843222221111 01123445555 99999998888
Q ss_pred e-----CCCeEEEEeCCCCCceeee-----ec----------------CCCeEEEEEcCCCCEEEEEec-CCeEEEEeCC
Q 018806 232 Y-----ESSSFTIWDVAQGLGTPIR-----RG----------------FGGLSILKWSPTGDYFFAAKF-DGTFYLWETN 284 (350)
Q Consensus 232 ~-----d~g~i~iwd~~~~~~~~~~-----~~----------------~~~v~~~~~sp~g~~l~~~~~-d~~v~iwd~~ 284 (350)
. .+++|.+|..+.+...... .. ......+.+|+||++|.++.. .+.|.+||+.
T Consensus 272 e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 6 5568887766554321111 00 134678999999999977765 6799999986
Q ss_pred CC---ceeccccCC---------------CCeEEEEEcCCCCEEEEEE
Q 018806 285 TW---TSEPWSSTS---------------GFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 285 ~~---~~~~~~~~~---------------~~v~~~~~s~~g~~l~~~~ 314 (350)
.. +........ +....++++|||++|+++.
T Consensus 352 d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 352 NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 33 222111111 1358899999999999987
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=2.3e-08 Score=86.65 Aligned_cols=205 Identities=8% Similarity=-0.047 Sum_probs=126.0
Q ss_pred cCeeEEEEecCCCEEEEEEC-----CCeEEEEEccCCCCCceeEecC-----CCCCCeeEEEEeeCCCeEEEEe----cC
Q 018806 100 VDLQGVSWHQHKHIVAFISG-----STQVIVRDYEDSEGKDACILTS-----DSQRDVKVLEWRPNGGRSLSVG----CK 165 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~-----d~~i~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~----~d 165 (350)
..+.+++++++|+++++-.. ++.|.+||+.+ ++....+.. .+...+..++++++++.++.+. .+
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t--g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN--NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT--TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC--CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 36999999999986665433 57899999853 443333321 1234578999998755655544 45
Q ss_pred CcEEEEecCCCCCCceeecc--ccccc-ceecC--------CCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC
Q 018806 166 GGICIWAPSYPGNAASVRSG--AASFL-GALSR--------GPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES 234 (350)
Q Consensus 166 ~~v~iwd~~~~~~~~~~~~~--~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~ 234 (350)
+.|.+||+..... ..+... ...+. ..+.. +.++....+ ...+..++|+|+|+.|+++....
T Consensus 145 ~~i~v~d~~~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~-------~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 145 AALIRVDLQTGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRP-------HLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp CEEEEEETTTCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECC-------CCCEEEEEECTTSCEEEEEESSC
T ss_pred CeEEEEECCCCCE-EEEecCCCcccccccceeECCEEEEeccCCCceece-------ecccceeEeccCCCEEEEEeCCC
Confidence 8999999874432 222111 00000 00000 111111000 12467899999999999887774
Q ss_pred CeEEEEeCC---CCCc--------eeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccC--CCCeEEE
Q 018806 235 SSFTIWDVA---QGLG--------TPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSST--SGFVTGA 301 (350)
Q Consensus 235 g~i~iwd~~---~~~~--------~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~v~~~ 301 (350)
..+..++.. .+.. .....+.+....++++++|.++++...++.|.+||.++++...+... ...+.++
T Consensus 217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~v 296 (343)
T 2qe8_A 217 TSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSF 296 (343)
T ss_dssp SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEE
T ss_pred CeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCee
Confidence 466665532 1110 11223344567799999999888888899999999966665443322 4568999
Q ss_pred EEcCCCCEEEEEE
Q 018806 302 TWDPEGRMILLAF 314 (350)
Q Consensus 302 ~~s~~g~~l~~~~ 314 (350)
+|.++|++++++.
T Consensus 297 a~~~~g~l~v~~~ 309 (343)
T 2qe8_A 297 NFGSDGYLYFDCN 309 (343)
T ss_dssp EECTTSCEEEEEC
T ss_pred EECCCCcEEEEeC
Confidence 9999988777664
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.05 E-value=9.2e-09 Score=89.40 Aligned_cols=215 Identities=12% Similarity=-0.092 Sum_probs=133.0
Q ss_pred EEEEecCCCEEEEEE----------CCCeEEEEEccCCCCCceeEecCC-C-----CCCeeEEEEeeCCCeEEEEec--C
Q 018806 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSEGKDACILTSD-S-----QRDVKVLEWRPNGGRSLSVGC--K 165 (350)
Q Consensus 104 ~v~~sp~g~~la~~s----------~d~~i~iw~~~~~~~~~~~~~~~~-~-----~~~v~~~~~sp~~~~l~~~~~--d 165 (350)
.+.++|||++++++. .++.|.+||..+ .+....+..+ . ......++++|||++++++.. .
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T--~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT--CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 799999999999886 368899999954 5555555322 0 134678999999988888764 3
Q ss_pred CcEEE--EecCCCCCCceeeccc---cccc---ceecCCCCCceEEeeecc-----CCC-----------CCceeeEEEC
Q 018806 166 GGICI--WAPSYPGNAASVRSGA---ASFL---GALSRGPGTRWTLVDFLR-----SQN-----------GEQITALSWG 221 (350)
Q Consensus 166 ~~v~i--wd~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~-----~~~-----------~~~v~~~~~s 221 (350)
..+.+ +|... ...+.... ..+. ..++.+.++++.....-. ++. ..+. . +
T Consensus 147 ~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~ 219 (368)
T 1mda_H 147 AAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-A 219 (368)
T ss_dssp CEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-E
T ss_pred CeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-c
Confidence 67888 88864 22222111 0111 113444455443333211 000 0111 3 5
Q ss_pred CCCCeEEEEEeCCCeEEEEeCCCCCceeeee-------------cCCCeEEEEEcCCCCEEEEEec-C--------CeEE
Q 018806 222 PDGRYLASASYESSSFTIWDVAQGLGTPIRR-------------GFGGLSILKWSPTGDYFFAAKF-D--------GTFY 279 (350)
Q Consensus 222 p~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-------------~~~~v~~~~~sp~g~~l~~~~~-d--------~~v~ 279 (350)
+++..++..+. + .+.+.|..+.....+.. .......++++|+++.++++.. . +.+.
T Consensus 220 ~~~~~~~~vs~-~-~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 220 NYPGMLVWAVA-S-SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp TTTTEEEECBS-S-CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred ccCCEEEEEcC-C-EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 66666666666 4 89999987543221110 0112223789999998876543 2 3566
Q ss_pred EEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEEEeCCCC
Q 018806 280 LWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA-GSLTLGSIHFASKP 329 (350)
Q Consensus 280 iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~~~~~~~~~~~~~ 329 (350)
++|+.+++.............++|+|||+++++++. .+..+..++.....
T Consensus 298 ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 298 SVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 999999988544433346899999999997777776 57788888876544
No 222
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=1.7e-07 Score=76.38 Aligned_cols=190 Identities=12% Similarity=0.068 Sum_probs=126.9
Q ss_pred eeEEEEecCCCEEEEEECCC--eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 102 LQGVSWHQHKHIVAFISGST--QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~--~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
...+.|+ ++.+..+.+.+| .|+++|+.+ ++....+.. ..........+++++++.... ++.+.+||..+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~T--gkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIES--GKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTT--CCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCC--CcEEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 5788898 777666767666 788888854 665555532 234444444455667776665 69999999985443
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee---cC-
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR---GF- 254 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~---~~- 254 (350)
...+ ... . ....+++|++.|+.+... +.|.++|..+.+...... ..
T Consensus 120 ~~ti-------------------------~~~--~--eG~glt~dg~~L~~SdGs-~~i~~iDp~T~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 120 VRSF-------------------------NYD--G--EGWGLTHNDQYLIMSDGT-PVLRFLDPESLTPVRTITVTAHGE 169 (262)
T ss_dssp EEEE-------------------------ECS--S--CCCCEEECSSCEEECCSS-SEEEEECTTTCSEEEEEECEETTE
T ss_pred EEEE-------------------------ECC--C--CceEEecCCCEEEEECCC-CeEEEEcCCCCeEEEEEEeccCCc
Confidence 3332 211 1 122333678888777666 599999999887654322 11
Q ss_pred --CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc-------------CCCCeEEEEEcCCCCEEEEEECCCeE
Q 018806 255 --GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-------------TSGFVTGATWDPEGRMILLAFAGSLT 319 (350)
Q Consensus 255 --~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~-------------~~~~v~~~~~s~~g~~l~~~~~~~~~ 319 (350)
..+..+.|. +|+..+..-.++.|.+.|.++++...... .......+||+|+++.|++++..=-.
T Consensus 170 ~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~ 248 (262)
T 3nol_A 170 ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPK 248 (262)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 334567776 77655655568899999999999843221 12356899999999999988855568
Q ss_pred EEEEEeCC
Q 018806 320 LGSIHFAS 327 (350)
Q Consensus 320 ~~~~~~~~ 327 (350)
++++++-.
T Consensus 249 ~~ev~~~~ 256 (262)
T 3nol_A 249 VFEITLTQ 256 (262)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 88888754
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=6.4e-08 Score=84.94 Aligned_cols=193 Identities=12% Similarity=0.116 Sum_probs=119.9
Q ss_pred cCCCEEEEE-ECCCeEEEEEccCCCCC--ceeEec-----CC-CCCCeeEEEEeeCCCeEEEEecC------CcEEEEec
Q 018806 109 QHKHIVAFI-SGSTQVIVRDYEDSEGK--DACILT-----SD-SQRDVKVLEWRPNGGRSLSVGCK------GGICIWAP 173 (350)
Q Consensus 109 p~g~~la~~-s~d~~i~iw~~~~~~~~--~~~~~~-----~~-~~~~v~~~~~sp~~~~l~~~~~d------~~v~iwd~ 173 (350)
+++++|+.. ..++.|.++|+.....+ ....+. .. ....-..+..+|+| .++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 788877764 46788999998543222 222220 00 01134556778997 66655444 67889988
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE-------------------eCC
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS-------------------YES 234 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-------------------~d~ 234 (350)
.+.+....+... ......-..+.|+|+++.++++. ..
T Consensus 172 ~T~~v~~~~~~~-----------------------~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~- 227 (462)
T 2ece_A 172 YSFEPLGKWEID-----------------------RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYG- 227 (462)
T ss_dssp TTCCEEEECCSB-----------------------CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSC-
T ss_pred CCCeEEEEEccC-----------------------CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccC-
Confidence 744332222111 11112345688999999888874 24
Q ss_pred CeEEEEeCCCCCceeeeecC---CCeEEEEE--cCCCCEEEEEe------cCCeEEEEeCCCCcee--cc---cc-----
Q 018806 235 SSFTIWDVAQGLGTPIRRGF---GGLSILKW--SPTGDYFFAAK------FDGTFYLWETNTWTSE--PW---SS----- 293 (350)
Q Consensus 235 g~i~iwd~~~~~~~~~~~~~---~~v~~~~~--sp~g~~l~~~~------~d~~v~iwd~~~~~~~--~~---~~----- 293 (350)
.+|.+||+.+++......-. .....+.| +|+|+++++++ .+++|.+|..+.++.. +. ..
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~ 307 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG 307 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS
T ss_pred CEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc
Confidence 49999999987654433321 23455655 99999987766 4568877766544321 10 00
Q ss_pred -----------CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 294 -----------TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 294 -----------~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
.......+.+|+||++|++++-+...+..+++.
T Consensus 308 ~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 308 NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 024578899999999999999666677777764
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.97 E-value=2.9e-07 Score=74.99 Aligned_cols=187 Identities=12% Similarity=0.044 Sum_probs=122.1
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCc
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 180 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~ 180 (350)
...+.|+ ++.+..+.+.+|.|+++|+.+ ++....+ .. .........+++++++.... ++.+.+||..+.+...
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~T--gkv~~~~-l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLES--AQPVWME-RL--GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSC--SSCSEEE-EC--TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCC--CcEEeEE-CC--CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 5678887 456666677788999999865 5555554 22 23444333445566666655 6999999998433322
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee---cC---
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR---GF--- 254 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~---~~--- 254 (350)
++.... .-+.++ +|++.|+.+..+ +.|.++|..+.+...... ..
T Consensus 131 -------------------------ti~~~~--eGwGLt--~Dg~~L~vSdGs-~~l~~iDp~T~~v~~~I~V~~~g~~v 180 (268)
T 3nok_A 131 -------------------------TTRYSG--EGWGLC--YWNGKLVRSDGG-TMLTFHEPDGFALVGAVQVKLRGQPV 180 (268)
T ss_dssp -------------------------EEECSS--CCCCEE--EETTEEEEECSS-SEEEEECTTTCCEEEEEECEETTEEC
T ss_pred -------------------------EEeCCC--ceeEEe--cCCCEEEEECCC-CEEEEEcCCCCeEEEEEEeCCCCccc
Confidence 222211 223444 578888877766 599999999887654322 21
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--------------cCCCCeEEEEEcCCCCEEEEEECCCeEE
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--------------STSGFVTGATWDPEGRMILLAFAGSLTL 320 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--------------~~~~~v~~~~~s~~g~~l~~~~~~~~~~ 320 (350)
..+..+.|. +|+..+....++.|.+.|.++++..... ......+.|||+|+++.|++++..=-.+
T Consensus 181 ~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~ 259 (268)
T 3nok_A 181 ELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRL 259 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEE
T ss_pred ccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCce
Confidence 245667777 7765555556889999999999974321 1224568999999988888776444577
Q ss_pred EEEEe
Q 018806 321 GSIHF 325 (350)
Q Consensus 321 ~~~~~ 325 (350)
+++++
T Consensus 260 ~ev~~ 264 (268)
T 3nok_A 260 FEVRL 264 (268)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77776
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.97 E-value=5.5e-08 Score=84.52 Aligned_cols=194 Identities=16% Similarity=0.104 Sum_probs=118.2
Q ss_pred EecCCCEEEEEEC-----CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec----------CCcEEEE
Q 018806 107 WHQHKHIVAFISG-----STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC----------KGGICIW 171 (350)
Q Consensus 107 ~sp~g~~la~~s~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----------d~~v~iw 171 (350)
..|+++++++... ++.|.+.|..+ .+.+..+..+.. + . ++++|||++++++.. ++.|.+|
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3579998888765 57888888853 555555543333 3 4 999999988877652 4789999
Q ss_pred ecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-CCeEEEEeCCCCCceee
Q 018806 172 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-SSSFTIWDVAQGLGTPI 250 (350)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~g~i~iwd~~~~~~~~~ 250 (350)
|..+.+....+..... -..........++|+|||++++.+... ++.|.++|+.+++....
T Consensus 115 D~~t~~v~~~I~v~~g-------------------~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~t 175 (386)
T 3sjl_D 115 DPVTLLPTADIELPDA-------------------PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRM 175 (386)
T ss_dssp CTTTCCEEEEEEETTC-------------------CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred ECCCCeEEEEEECCCc-------------------cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 9985543333221100 000001256789999999999988742 35999999999977654
Q ss_pred eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC-Cceec----cc-cCCCCe-EEEEEc-CCCCEEEEEECCCeEEEE
Q 018806 251 RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT-WTSEP----WS-STSGFV-TGATWD-PEGRMILLAFAGSLTLGS 322 (350)
Q Consensus 251 ~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~-~~~~~----~~-~~~~~v-~~~~~s-~~g~~l~~~~~~~~~~~~ 322 (350)
..-.+. ...+....+.+++.+.||.+.+.++.+ ++... .. ....++ ...+|. ++|++++++.+ ..++.
T Consensus 176 I~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~--g~V~v 251 (386)
T 3sjl_D 176 LDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYT--GKIHQ 251 (386)
T ss_dssp EECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTT--SEEEE
T ss_pred EECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCC--CEEEE
Confidence 433221 122322344566667778777777765 44411 11 111222 234664 78876664443 36777
Q ss_pred EEeCCC
Q 018806 323 IHFASK 328 (350)
Q Consensus 323 ~~~~~~ 328 (350)
+++...
T Consensus 252 ~d~~~~ 257 (386)
T 3sjl_D 252 IDLSSG 257 (386)
T ss_dssp EECTTS
T ss_pred EECCCC
Confidence 777544
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.96 E-value=3.1e-06 Score=70.33 Aligned_cols=196 Identities=6% Similarity=-0.035 Sum_probs=126.0
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|++++..|+.+. ..+.|..++.+. .. ...+..........++++++++.++.+.. .+.|.++++.. ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--~~-~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g-~~ 112 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GE-PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG-TQ 112 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSS--CC-CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CS
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCC--CC-cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC-CC
Confidence 367899999877666655 467899999853 22 22222222246789999998677776665 48899988762 21
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC--CCeEEEEeCCCCCceeee-ecCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE--SSSFTIWDVAQGLGTPIR-RGFG 255 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--~g~i~iwd~~~~~~~~~~-~~~~ 255 (350)
...+ .... ......++++|++..|+.+... .+.|..+++.......+. ....
T Consensus 113 ~~~~------------------------~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~ 167 (267)
T 1npe_A 113 RRVL------------------------FDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLG 167 (267)
T ss_dssp CEEE------------------------ECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCS
T ss_pred EEEE------------------------EECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCC
Confidence 1111 0111 1356899999977766665543 358999988754433332 2235
Q ss_pred CeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 256 GLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
....+++++++..|+.+. ..+.|.++|........+.........++. ++..|+++..+...+..++...
T Consensus 168 ~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCC
Confidence 678999999887776554 467999999986554433333344566665 4677887775556777777653
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=4.6e-08 Score=84.72 Aligned_cols=199 Identities=9% Similarity=0.097 Sum_probs=119.2
Q ss_pred CeeEEEEecCCCEEEEEEC--CCeEEEEEccCCCCCceeEe------cCCCCCCeeEEEEeeCCCeEEEEe-c-----CC
Q 018806 101 DLQGVSWHQHKHIVAFISG--STQVIVRDYEDSEGKDACIL------TSDSQRDVKVLEWRPNGGRSLSVG-C-----KG 166 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~--d~~i~iw~~~~~~~~~~~~~------~~~~~~~v~~~~~sp~~~~l~~~~-~-----d~ 166 (350)
.+..++++|+|+++++... ++.++||.++ +++. ..+ ...+-..+..++++++|+ |+++. . +.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 4789999999998887542 3436677775 2332 211 112446799999999954 54443 2 47
Q ss_pred cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE----eCCCeEEEEeC
Q 018806 167 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS----YESSSFTIWDV 242 (350)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~----~d~g~i~iwd~ 242 (350)
.|.+||+..++....+... .....+ ...+..+++++++..++.+. .+ +.|.+||.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~-------------------~~~~~~-~~~~~~v~vd~~~g~~yvtd~~~~~~-~~i~v~d~ 152 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLP-------------------PPITLS-NSFVNDLAVDLIHNFVYISDPAPDDK-AALIRVDL 152 (343)
T ss_dssp EEEEEETTTTEEEEEEECC-------------------TTTSCT-TCCCCEEEEETTTTEEEEEECCSGGG-CEEEEEET
T ss_pred eEEEEECCCCeEEEEEECC-------------------hhhccc-ccccceEEEecCCCEEEEEcCccCCC-CeEEEEEC
Confidence 8999998743322111100 000111 23568999998755555443 45 59999999
Q ss_pred CCCCceeeeec------------------------------CCCeEEEEEcCCCCEEEEEecCC-eEEEEeCC---CCce
Q 018806 243 AQGLGTPIRRG------------------------------FGGLSILKWSPTGDYFFAAKFDG-TFYLWETN---TWTS 288 (350)
Q Consensus 243 ~~~~~~~~~~~------------------------------~~~v~~~~~sp~g~~l~~~~~d~-~v~iwd~~---~~~~ 288 (350)
.+++...+... ...+..++|+|+|+.|+++..++ .++.++.. .+..
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 87764433211 02357899999999998877655 56555532 1111
Q ss_pred --e------ccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 289 --E------PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 289 --~------~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
. ...++......++++++|++++ +......+..|+.
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~v-a~~~~~~V~~~d~ 276 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYV-GDLAHSAIGVITS 276 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEE-EEGGGTEEEEEET
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEE-EccCCCeEEEEEC
Confidence 0 1112334567899999997655 4433346777765
No 228
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.94 E-value=5.5e-07 Score=78.76 Aligned_cols=182 Identities=10% Similarity=0.002 Sum_probs=109.1
Q ss_pred CeeEEEEecCCCEEEEEEC--CCeEEEEEccCCCCCceeE-ecCCCCCCeeEEEEeeCCCeE-EEEecCCcEEEEecCCC
Q 018806 101 DLQGVSWHQHKHIVAFISG--STQVIVRDYEDSEGKDACI-LTSDSQRDVKVLEWRPNGGRS-LSVGCKGGICIWAPSYP 176 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~--d~~i~iw~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~iwd~~~~ 176 (350)
....+.|+|||++|+++.. ++.|.++| .+ ++.... +. ... ++.+.|++... ++.+.|+.+.++|. ..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t--~~~~~~~i~--~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QG--GSSDDQLLS--SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CC--CCEEeEEcC--CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 3458999999999998874 47899998 64 444444 32 222 24556665444 44445788888888 43
Q ss_pred CCCceee-----cccc--------ccc-ce-ecCCCCCceEEee----------ecc---------CCCCCceeeEEECC
Q 018806 177 GNAASVR-----SGAA--------SFL-GA-LSRGPGTRWTLVD----------FLR---------SQNGEQITALSWGP 222 (350)
Q Consensus 177 ~~~~~~~-----~~~~--------~~~-~~-~~~~~~~~~~~~~----------~~~---------~~~~~~v~~~~~sp 222 (350)
+...... .... ... .. +.....+.....+ .+. +........++++|
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 3221111 0000 000 00 0000111111111 110 00012234478999
Q ss_pred CCCeEEEEEeC---------CCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCC-EEEEEe-cCCeEEEEeCCCCceecc
Q 018806 223 DGRYLASASYE---------SSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGD-YFFAAK-FDGTFYLWETNTWTSEPW 291 (350)
Q Consensus 223 ~g~~l~~~~~d---------~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~d~~v~iwd~~~~~~~~~ 291 (350)
+++.++.+..+ .+.|.++|..+++............+++|+|||+ .++++. .++.|.+||+.+++....
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 99988876531 1489999999988766555556789999999999 677776 489999999999988644
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.92 E-value=1e-06 Score=73.20 Aligned_cols=190 Identities=8% Similarity=0.002 Sum_probs=120.7
Q ss_pred CCEEEEEECCCeEEEEEccCCCCCce--eEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccc
Q 018806 111 KHIVAFISGSTQVIVRDYEDSEGKDA--CILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAA 187 (350)
Q Consensus 111 g~~la~~s~d~~i~iw~~~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~ 187 (350)
|.+|+.+.. +.|+.++++....... ..........+..++|+++++.++.+.. .+.|.+++.... ....+
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~~----- 73 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-EPTTI----- 73 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC-CCEEE-----
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC-CcEEE-----
Confidence 345666554 4688888763221110 1111111235789999998777777666 488999988632 21111
Q ss_pred cccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec-CCCeEEEEEcCCC
Q 018806 188 SFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG-FGGLSILKWSPTG 266 (350)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~g 266 (350)
+... ......+++++++..|+.+...++.|.+++........+... ......++++|++
T Consensus 74 -------------------~~~~-~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~ 133 (267)
T 1npe_A 74 -------------------IRQD-LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVR 133 (267)
T ss_dssp -------------------ECTT-CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTT
T ss_pred -------------------EECC-CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCC
Confidence 1111 146789999998777777766556999999876544333332 2567899999976
Q ss_pred CEEEEEec---CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 267 DYFFAAKF---DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 267 ~~l~~~~~---d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
..|+.+.. .+.|+.++++......+. ........+++++++..|+++......+..++...
T Consensus 134 g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 66655543 368989988754433332 22345789999999999998886666777777643
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=1.4e-07 Score=85.59 Aligned_cols=209 Identities=11% Similarity=0.024 Sum_probs=122.0
Q ss_pred cCCCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEE-e-eCCCeEEEEec------------------CCc
Q 018806 109 QHKHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEW-R-PNGGRSLSVGC------------------KGG 167 (350)
Q Consensus 109 p~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~-s-p~~~~l~~~~~------------------d~~ 167 (350)
+||++|..... +..|.+.|+++ .+....+..........+++ + |+++++++++. ++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t--~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDV--MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTT--TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCC--ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 38888888665 55688889864 44444333344456889998 5 99888877751 257
Q ss_pred EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCC--------Cc---eee------EEECCCCCeEEEE
Q 018806 168 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNG--------EQ---ITA------LSWGPDGRYLASA 230 (350)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---v~~------~~~sp~g~~l~~~ 230 (350)
+.+.|..+.+...++..+. . ...+..+++++|........... .. +.- ..+.++|+....
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i- 253 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-N-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL- 253 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-C-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE-
T ss_pred EEEEECCCCeEEEEEEeCC-C-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE-
Confidence 8888887443333333221 1 11223333444443333222110 00 000 011223333221
Q ss_pred EeCCCeEEEEeCCC--CCc-eeeeecCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCc------------eeccccC
Q 018806 231 SYESSSFTIWDVAQ--GLG-TPIRRGFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWT------------SEPWSST 294 (350)
Q Consensus 231 ~~d~g~i~iwd~~~--~~~-~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~------------~~~~~~~ 294 (350)
+.|.+.|.++ ++. .....-.....++.++|||+++++++ .+.+|.++|+.+.+ ......-
T Consensus 254 ----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 254 ----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp ----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred ----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 2478888887 433 23333334667899999999987665 57899999998653 1112233
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 295 SGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 295 ~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
......++|+|+| +++++..-+..+..|++..
T Consensus 330 G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 4567899999999 8888876666677777654
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=4.8e-06 Score=67.19 Aligned_cols=193 Identities=14% Similarity=0.088 Sum_probs=125.1
Q ss_pred CeeEEEEecCCCEEEEEECC--CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGS--TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d--~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
-...+.|+. +.+..+.+.. ..|+.+|+.+ ++........ .........+.+++++.... ++.+.+||..+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~t--gkv~~~~~l~--~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLET--GRILQRAEVP--PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTT--CCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCC--CCEEEEEeCC--CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 367888886 5555555554 4899999954 6655555322 23444444445567666655 6999999988433
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee---cC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR---GF 254 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~---~~ 254 (350)
.. .++.... .-..+ .++++.|+.+..+ +.|.++|..+.+...... +.
T Consensus 97 ~~-------------------------~ti~~~~--~Gwgl--t~dg~~L~vSdgs-~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 97 PR-------------------------ARFRYPG--EGWAL--TSDDSHLYMSDGT-AVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp EE-------------------------EEEECSS--CCCEE--EECSSCEEEECSS-SEEEEECTTTCCEEEEEECEETT
T ss_pred EE-------------------------EEEeCCC--CceEE--eeCCCEEEEECCC-CeEEEEeCCCCeEEEEEEEccCC
Confidence 32 2222211 12344 4577888777666 599999999887654322 11
Q ss_pred ---CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--------------cCCCCeEEEEEcCCCCEEEEEECCC
Q 018806 255 ---GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--------------STSGFVTGATWDPEGRMILLAFAGS 317 (350)
Q Consensus 255 ---~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--------------~~~~~v~~~~~s~~g~~l~~~~~~~ 317 (350)
..+..+.|. +|+..+..-.+..|.+.|.++++..... ......+.+||+|+++.|++++..=
T Consensus 147 ~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 147 RPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred cccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 345567765 7765555556789999999999974221 1123568999999999888887555
Q ss_pred eEEEEEEeCCCC
Q 018806 318 LTLGSIHFASKP 329 (350)
Q Consensus 318 ~~~~~~~~~~~~ 329 (350)
-.++.+++-..+
T Consensus 226 p~~~~v~~~~~~ 237 (243)
T 3mbr_X 226 PMLYEIRLTPLP 237 (243)
T ss_dssp SEEEEEEECCCC
T ss_pred CcEEEEEEecCC
Confidence 689999886544
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=3.7e-07 Score=82.91 Aligned_cols=206 Identities=12% Similarity=0.083 Sum_probs=121.0
Q ss_pred ccCeeEEEE-e-cCCCEEEEEE------------------CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCe
Q 018806 99 EVDLQGVSW-H-QHKHIVAFIS------------------GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGR 158 (350)
Q Consensus 99 ~~~V~~v~~-s-p~g~~la~~s------------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 158 (350)
+.....+++ + |+++++++++ .++.+.+.|.++ .+...++..+ +.-..++++|+|++
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t--~~v~~qI~Vg--g~pd~~~~spdGk~ 208 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK--WEVAWQVLVS--GNLDNCDADYEGKW 208 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT--TEEEEEEEES--SCCCCEEECSSSSE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC--CeEEEEEEeC--CCccceEECCCCCE
Confidence 345788888 5 9999998875 245778888753 4444444322 24577889999888
Q ss_pred EEEEecCC---------------cEEEEecCCCCCCceeecccccccce---ecCCC--CCceEEeeeccCCCCCceeeE
Q 018806 159 SLSVGCKG---------------GICIWAPSYPGNAASVRSGAASFLGA---LSRGP--GTRWTLVDFLRSQNGEQITAL 218 (350)
Q Consensus 159 l~~~~~d~---------------~v~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~v~~~ 218 (350)
+++++.+. .+.+.|..... ..+..+.....+. +.... ... ....+.. .....++
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~--~~v~~Gk~~~i~~V~VID~~~~~~~~--~~~~Ipv--g~~PhGv 282 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE--KAIAAGDYQELNGVKVVDGRKEASSL--FTRYIPI--ANNPHGC 282 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--HHHHHTCSEEETTEEEEECSGGGCCS--SEEEEEE--ESSCCCE
T ss_pred EEEEecCcccCcchhhccccccceEEEeecccee--EeccCCCeeEECcEEEEeCcccCCce--eEEEEec--CCCceEE
Confidence 88877642 25555543110 0111111110000 00000 000 0111111 1355789
Q ss_pred EECCCCCeEEEEEeCCCeEEEEeCCCCCc------------eeeeecCCCeEEEEEcCCCCEEE-EEecCCeEEEEeCCC
Q 018806 219 SWGPDGRYLASASYESSSFTIWDVAQGLG------------TPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNT 285 (350)
Q Consensus 219 ~~sp~g~~l~~~~~d~g~i~iwd~~~~~~------------~~~~~~~~~v~~~~~sp~g~~l~-~~~~d~~v~iwd~~~ 285 (350)
.++|||+++++++....+|.++|+.+.+. .....-......++|+|+| ++. +...|+.|.+||+++
T Consensus 283 ~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 283 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 99999999988876656999999986521 1111223568899999999 554 555699999999976
Q ss_pred ----------Ccee-ccccCCCC-----eEEEEEcCCCCEEEEEEC
Q 018806 286 ----------WTSE-PWSSTSGF-----VTGATWDPEGRMILLAFA 315 (350)
Q Consensus 286 ----------~~~~-~~~~~~~~-----v~~~~~s~~g~~l~~~~~ 315 (350)
.+.. .+..|..+ -..+.++|||++|++++.
T Consensus 362 a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 362 AIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp HHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred hhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 2222 22222221 122356899999999873
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.78 E-value=9.6e-07 Score=84.62 Aligned_cols=194 Identities=11% Similarity=0.048 Sum_probs=113.3
Q ss_pred CeeEEEEe-cCCCEEEEEEC-CC----eEEEEEccCCCC-CceeEecCCCCCCeeEEEEeeCCCeEEEEecC-----CcE
Q 018806 101 DLQGVSWH-QHKHIVAFISG-ST----QVIVRDYEDSEG-KDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-----GGI 168 (350)
Q Consensus 101 ~V~~v~~s-p~g~~la~~s~-d~----~i~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v 168 (350)
.+...+|| |||++||.+.. +| .|+++|++. + +.... .-......++|+|||+.|+++..+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~--g~~~l~~---~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISD--PSQTIAD---KVSGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTC--TTCCCCC---CEEEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCC--CCEeCCc---cccCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 57889999 99999997654 22 488888864 3 21110 001124578999999999888765 246
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC--CeEEEEeCCCCC
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES--SSFTIWDVAQGL 246 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~--g~i~iwd~~~~~ 246 (350)
+++++..+.....+ + +..........+.|||||++|+...... ..|+++|+.++.
T Consensus 250 ~~~~lgt~~~~~~l---------------------v--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 250 WRHVMGKLQSEDVC---------------------L--YEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp EEEETTSCGGGCEE---------------------E--EECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred EEEECCCCchhcEE---------------------E--EecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence 66666532211000 0 1111113456789999999998776431 278889998763
Q ss_pred --c--eeeee-cCCCeEEEEEcCCCCEE-EEEecC----CeEEEEeCCCC-ceec-cccCCCC--eEEEEEcCCCCEEEE
Q 018806 247 --G--TPIRR-GFGGLSILKWSPTGDYF-FAAKFD----GTFYLWETNTW-TSEP-WSSTSGF--VTGATWDPEGRMILL 312 (350)
Q Consensus 247 --~--~~~~~-~~~~v~~~~~sp~g~~l-~~~~~d----~~v~iwd~~~~-~~~~-~~~~~~~--v~~~~~s~~g~~l~~ 312 (350)
. ..+.. ......++.|+. |+.| +....+ ..|..+|+.++ +... +..+... +..+.+ .+..|++
T Consensus 307 ~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~ 383 (751)
T 2xe4_A 307 AHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVV 383 (751)
T ss_dssp TCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEE
T ss_pred CCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEE
Confidence 3 33332 234455566554 5555 444433 36777887753 3344 4444443 444444 4666665
Q ss_pred EE--CCCeEEEEEEe
Q 018806 313 AF--AGSLTLGSIHF 325 (350)
Q Consensus 313 ~~--~~~~~~~~~~~ 325 (350)
.. ++...++.+++
T Consensus 384 ~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 384 AGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred EEEeCCEEEEEEEec
Confidence 54 45567777775
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.72 E-value=2.2e-06 Score=75.71 Aligned_cols=183 Identities=9% Similarity=-0.032 Sum_probs=106.1
Q ss_pred CeeEEEEecCCCEEEEEEC--CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCC-CeEEEEecCCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISG--STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNG-GRSLSVGCKGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~--d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~iwd~~~~~ 177 (350)
....+.|+|||++|+++.. ++.|.+.|..+ .+....+..+. . ....|++ ..+++.+.||++.+.+.. ..
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t--~kvv~~I~v~g---~--~~~~p~g~~~~v~~~~dG~~~~V~~~-~~ 249 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG--KTFDRMLDVPD---C--YHIFPASPTVFYMNCRDGSLARVDFA-DG 249 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTT--TEEEEEEECCS---E--EEEEEEETTEEEEEETTSSEEEEECC-TT
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCC--CeEEEEEEcCC---c--eeeccCCCcEEEEEcCCCCEEEEECC-CC
Confidence 3567899999999998874 57899999854 55444443221 1 2233443 333444445666655652 22
Q ss_pred CCce-----eeccc--------ccccce--ecCCCCCceEEeeec----------c---------CCCCCceeeEEECCC
Q 018806 178 NAAS-----VRSGA--------ASFLGA--LSRGPGTRWTLVDFL----------R---------SQNGEQITALSWGPD 223 (350)
Q Consensus 178 ~~~~-----~~~~~--------~~~~~~--~~~~~~~~~~~~~~~----------~---------~~~~~~v~~~~~sp~ 223 (350)
.... +.... ...... +.....+.....+.. . +........++++|+
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 2111 00000 000000 000111222222210 0 000012234789999
Q ss_pred CCeEEEEEeC---------CCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCC-EEEEEe-cCCeEEEEeCCCCceecc
Q 018806 224 GRYLASASYE---------SSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGD-YFFAAK-FDGTFYLWETNTWTSEPW 291 (350)
Q Consensus 224 g~~l~~~~~d---------~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~~~~-~d~~v~iwd~~~~~~~~~ 291 (350)
+++++....+ .+.|.++|..+.+......-......+.|+|||+ ++++.. .++.|.++|+.+++....
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 9888776531 1379999999998776554445688999999999 888877 589999999999998544
No 235
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=3.2e-06 Score=72.35 Aligned_cols=186 Identities=8% Similarity=0.017 Sum_probs=115.3
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC-------------------CCCCeeEEEEeeCCCeEEEE
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD-------------------SQRDVKVLEWRPNGGRSLSV 162 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~-------------------~~~~v~~~~~sp~~~~l~~~ 162 (350)
..+++|+++|+++.++..++.|..|+... +. ...+... .......+++.+++..++++
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPN--SG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTT--TC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCC--Cc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 56788999998777778889898888642 22 2211100 01347889999733566666
Q ss_pred ecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC-CCCeEEEEEe---------
Q 018806 163 GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRYLASASY--------- 232 (350)
Q Consensus 163 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~~~~~--------- 232 (350)
...+.+..+|... +....+.. ...+........+++.+ +|+..++...
T Consensus 98 d~~~~i~~~d~~~-g~~~~~~~---------------------~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 98 DCYYHLSVVGSEG-GHATQLAT---------------------SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp ETTTEEEEECTTC-EECEEEES---------------------EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred ECCCCEEEEeCCC-CEEEEecc---------------------cCCCCcccccceEEEecCCCEEEEECCcccccccccc
Confidence 5655577777552 11111110 01111113567899999 8876665432
Q ss_pred -------CCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCCCCc---eeccccCCCCeEEE
Q 018806 233 -------ESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAA-KFDGTFYLWETNTWT---SEPWSSTSGFVTGA 301 (350)
Q Consensus 233 -------d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~~~~---~~~~~~~~~~v~~~ 301 (350)
..|.|..||..+++...+.........++|+|+|++|+.+ ..++.|++|++.... ...+....+ ...+
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi 234 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI 234 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEE
T ss_pred eehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCe
Confidence 1257899998777654443333456679999999977665 456899999987532 222222223 7889
Q ss_pred EEcCCCCEEEEE
Q 018806 302 TWDPEGRMILLA 313 (350)
Q Consensus 302 ~~s~~g~~l~~~ 313 (350)
+++++|++.++.
T Consensus 235 ~~d~~G~l~va~ 246 (322)
T 2fp8_A 235 KRNADGHFWVSS 246 (322)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCCEEEEe
Confidence 999999866554
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=88.56 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=74.1
Q ss_pred CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccc
Q 018806 110 HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASF 189 (350)
Q Consensus 110 ~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 189 (350)
++..|++++.|+.++.||..+ ++..-.... +.+.+..+..++..+++++.|+.++.||...++........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t--G~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~---- 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT--GSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT---- 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT--CCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC----
T ss_pred eCCEEEEEcCCCEEEEEECCC--CCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc----
Confidence 677899999999999999854 665544432 45555556667556666667899999998754432221100
Q ss_pred cceecCCCCCceEEeeeccCCCCCce-eeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCE
Q 018806 190 LGALSRGPGTRWTLVDFLRSQNGEQI-TALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDY 268 (350)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~ 268 (350)
....+ .+..+. ++..+++++.+ |.++.||.++|+......... ...++|++..
T Consensus 79 ---------------------~~~~~~~sp~~~-~~~~v~~g~~d-g~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~ 132 (369)
T 2hz6_A 79 ---------------------IPELVQASPCRS-SDGILYMGKKQ-DIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSL 132 (369)
T ss_dssp ---------------------HHHHHTTCSCC------CCCCEEE-EEEEEECCC-------------------------
T ss_pred ---------------------CccccccCceEe-cCCEEEEEeCC-CEEEEEECCCCcEEEEecCCC---cccccccCCE
Confidence 00000 011111 34466777778 699999999998765443322 2345678888
Q ss_pred EEEEecCCeEEEEeCCCCcee
Q 018806 269 FFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 269 l~~~~~d~~v~iwd~~~~~~~ 289 (350)
+++++.|+.|+.||.++++..
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCC
T ss_pred EEEEecCCEEEEEECCCCCEE
Confidence 999999999999999999864
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.61 E-value=3.9e-06 Score=79.50 Aligned_cols=207 Identities=11% Similarity=0.108 Sum_probs=119.9
Q ss_pred eEEEEecCCCEEEEEECCCe-------------------EEEEEccCCCCCceeEecCC-CC-------CCeeEEEEeeC
Q 018806 103 QGVSWHQHKHIVAFISGSTQ-------------------VIVRDYEDSEGKDACILTSD-SQ-------RDVKVLEWRPN 155 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~d~~-------------------i~iw~~~~~~~~~~~~~~~~-~~-------~~v~~~~~sp~ 155 (350)
..++++|++.+|++++.++. |..+|..+ ++..-..... |. ..+.......+
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~T--G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADT--GEYVWHYQTTPGDAWDYTATQHMILAELPID 315 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTT--CCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccC--CceeEeeecCCcccccccCCCCcEEEeeccC
Confidence 36889999999998887763 88888854 6554443322 22 11222233335
Q ss_pred CC---eEEEEecCCcEEEEecCCCCCCceeeccccccccee-------------c--CCCCCceEEeeeccCCCCCceee
Q 018806 156 GG---RSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGAL-------------S--RGPGTRWTLVDFLRSQNGEQITA 217 (350)
Q Consensus 156 ~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~v~~ 217 (350)
|+ .++.+..+|.++++|..+++...............+ . ..............+. .....
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg--~~w~~ 393 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA--HDWQP 393 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS--SCSSC
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc--cCCCc
Confidence 54 455556679999999986654422221110000000 0 0000000011011111 12345
Q ss_pred EEECCCCCeEEEEEeC--------------------------------------------CCeEEEEeCCCCCceeeeec
Q 018806 218 LSWGPDGRYLASASYE--------------------------------------------SSSFTIWDVAQGLGTPIRRG 253 (350)
Q Consensus 218 ~~~sp~g~~l~~~~~d--------------------------------------------~g~i~iwd~~~~~~~~~~~~ 253 (350)
++++|+...+++...+ +|.|..||+.+++......+
T Consensus 394 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 473 (689)
T 1yiq_A 394 MSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY 473 (689)
T ss_dssp CEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE
T ss_pred ceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC
Confidence 7888887777665321 15899999999987765555
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--cCCCCeEEEEEcCCCCEEEEE
Q 018806 254 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 254 ~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~ 313 (350)
......-.+...+..++.++.|+.|+.||.++|+..... .......-+.|..+|++.++.
T Consensus 474 ~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 474 VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEE
Confidence 444444466667889999999999999999999985322 222223457788899865543
No 238
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.61 E-value=8.3e-05 Score=60.77 Aligned_cols=201 Identities=8% Similarity=0.096 Sum_probs=119.3
Q ss_pred CeeEEEEecCCCEEEE-EECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCC
Q 018806 101 DLQGVSWHQHKHIVAF-ISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 179 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~-~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~ 179 (350)
++..++|+|+++.|++ ...++.|...|.. ++....+...-....-.+++.+++..+++.-.++.+.++++......
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 6999999998776665 5566676666663 55555543333356888999888543343334588999988754431
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC---CCceeeee----
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ---GLGTPIRR---- 252 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~---~~~~~~~~---- 252 (350)
..+.... ..............++|+|.++.|+++...+ ...+|.++. .....+..
T Consensus 105 ~~~~~~~-----------------~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 105 KILKKIK-----------------IPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp EEEEEEE-----------------CCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHH
T ss_pred eeeeeec-----------------cccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhh
Confidence 1111100 0000111235678999999998888877763 445554431 11112221
Q ss_pred ----cCCCeEEEEEcCC-CCEEEEEecCCeEEEEeCCCCcee--cccc-------CCCCeEEEEEcCCCCEEEEEECCCe
Q 018806 253 ----GFGGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSE--PWSS-------TSGFVTGATWDPEGRMILLAFAGSL 318 (350)
Q Consensus 253 ----~~~~v~~~~~sp~-g~~l~~~~~d~~v~iwd~~~~~~~--~~~~-------~~~~v~~~~~s~~g~~l~~~~~~~~ 318 (350)
....+..++++|. +++++....++.|.++|.+..-.. .+.. .-...-.|+|.++|++.+ .+...
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n- 244 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPN- 244 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTT-
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCc-
Confidence 1245789999996 455566667789999997754222 2221 113568999999998555 45442
Q ss_pred EEEEEE
Q 018806 319 TLGSIH 324 (350)
Q Consensus 319 ~~~~~~ 324 (350)
.+|.++
T Consensus 245 ~~y~f~ 250 (255)
T 3qqz_A 245 RFYRFT 250 (255)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 555543
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=8.3e-06 Score=77.08 Aligned_cols=205 Identities=10% Similarity=0.073 Sum_probs=122.1
Q ss_pred eEEEEecCCCEEEEEECCC-------------------eEEEEEccCCCCCceeEecCC-CC-------CCeeEEEEeeC
Q 018806 103 QGVSWHQHKHIVAFISGST-------------------QVIVRDYEDSEGKDACILTSD-SQ-------RDVKVLEWRPN 155 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~d~-------------------~i~iw~~~~~~~~~~~~~~~~-~~-------~~v~~~~~sp~ 155 (350)
..++++|++.+|+.++.++ .|..+|..+ ++..-.+... |. ....-+....+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T--G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT--GKYKWHYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT--CCEEEEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC--CCEEEEEecCCCcccccccCCCcEEEecccC
Confidence 4678999999998877664 477777744 6554443222 21 12222334456
Q ss_pred C---CeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEE-------------eeeccCCCCCceeeEE
Q 018806 156 G---GRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTL-------------VDFLRSQNGEQITALS 219 (350)
Q Consensus 156 ~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~v~~~~ 219 (350)
| ..++.+..+|.++++|..+++....+..........+. ..+.... .....+. ..-..++
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d--~~g~~~~~~~~~~~~~~~~~~P~~~G~--~~w~~~a 399 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD--KHGKPIGIAAARDGSKPQDAVPGPYGA--HNWHPMS 399 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC--TTSCEEECGGGGCTTSCEECSSCTTCS--SCSSCCE
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC--CCCceeeccccCcCCCccEECcCcccc--cCCCCce
Confidence 6 34556666899999999866554333221100000000 0000000 0001111 1124678
Q ss_pred ECCCCCeEEEEEeC------------------------------------------CCeEEEEeCCCCCceeeeecCCCe
Q 018806 220 WGPDGRYLASASYE------------------------------------------SSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 220 ~sp~g~~l~~~~~d------------------------------------------~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
++|++..+++...+ .|.|..||+.+++......+...+
T Consensus 400 ~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 479 (677)
T 1kb0_A 400 FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW 479 (677)
T ss_dssp EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC
Confidence 88888877765431 158999999999877666555555
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc--cCCCCeEEEEEcCCCCEEEEE
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~ 313 (350)
....+..++..++.++.|+.+++||.++++..... .+.....-+.|..+|+.+++.
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 55567778888988999999999999999985322 222333456778889766554
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.54 E-value=1.4e-06 Score=75.72 Aligned_cols=88 Identities=3% Similarity=-0.110 Sum_probs=65.3
Q ss_pred EEECCCCCeEEEEEe---C-----CCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEE-EEEe-cCCeEEEEeCCCCc
Q 018806 218 LSWGPDGRYLASASY---E-----SSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYF-FAAK-FDGTFYLWETNTWT 287 (350)
Q Consensus 218 ~~~sp~g~~l~~~~~---d-----~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~~~~-~d~~v~iwd~~~~~ 287 (350)
++++|++++++.+.. . .+.+.++|+.+.+......-......++|+|||+.+ ++.. .+++|.++|+.+++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 789999998887643 1 125669999998776544434468899999999854 5555 48999999999999
Q ss_pred eeccccCCCCeEEEEEcC
Q 018806 288 SEPWSSTSGFVTGATWDP 305 (350)
Q Consensus 288 ~~~~~~~~~~v~~~~~s~ 305 (350)
......-....+.+++.+
T Consensus 349 vv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 349 DQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEECCCCSCCCEEECCC
T ss_pred EEEEEECCCCCCEEEeec
Confidence 866555555567777765
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.52 E-value=3.9e-05 Score=65.48 Aligned_cols=194 Identities=10% Similarity=0.070 Sum_probs=108.0
Q ss_pred CeeEEEEec-CCCEEEEEECCCeEEEEEccCCCCCceeEecC---C-CCCCeeEEEEee-CCCeEEEEec----------
Q 018806 101 DLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSEGKDACILTS---D-SQRDVKVLEWRP-NGGRSLSVGC---------- 164 (350)
Q Consensus 101 ~V~~v~~sp-~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~---~-~~~~v~~~~~sp-~~~~l~~~~~---------- 164 (350)
.+.++++++ +|+ |..+...+.+..++... +. ...+.. + .......+++.+ +|..+++...
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~--g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEG--GH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTC--EE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCC--CE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 478899998 565 55555555577777542 22 111111 1 113467888888 7654444322
Q ss_pred -------CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeE
Q 018806 165 -------KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSF 237 (350)
Q Consensus 165 -------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i 237 (350)
.+.|..+|..... ...+ ...+ .....++|+|+|+.|+.+...++.|
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~-~~~~---------------------~~~~-----~~p~gia~~~dg~~lyv~d~~~~~I 209 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKE-TTLL---------------------LKEL-----HVPGGAEVSADSSFVLVAEFLSHQI 209 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTE-EEEE---------------------EEEE-----SCCCEEEECTTSSEEEEEEGGGTEE
T ss_pred ehcccCCCceEEEEeCCCCE-EEEe---------------------ccCC-----ccCcceEECCCCCEEEEEeCCCCeE
Confidence 1445555543111 0000 0001 2456799999999777664433599
Q ss_pred EEEeCCCCC---ceeeeecCCCeEEEEEcCCCCEEEEEec----------CCeEEEEeCCCCcee-ccccC----CCCeE
Q 018806 238 TIWDVAQGL---GTPIRRGFGGLSILKWSPTGDYFFAAKF----------DGTFYLWETNTWTSE-PWSST----SGFVT 299 (350)
Q Consensus 238 ~iwd~~~~~---~~~~~~~~~~v~~~~~sp~g~~l~~~~~----------d~~v~iwd~~~~~~~-~~~~~----~~~v~ 299 (350)
.+|++.... ...+....+ ...+++.++|++.++... .+.|..+|.. ++.. .+... ...++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~ 287 (322)
T 2fp8_A 210 VKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFE 287 (322)
T ss_dssp EEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCC
T ss_pred EEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccce
Confidence 999987532 222222233 788999999987666544 4678888875 4443 23222 23466
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 300 GATWDPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 300 ~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
.+++. + ..|+++......+..+++..+.
T Consensus 288 ~~~~~-~-g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 288 QIQEH-D-GLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEEE-T-TEEEEECSSCSEEEEEEC----
T ss_pred EEEEe-C-CEEEEeecCCCceEEEeccccc
Confidence 77763 4 4566666445577777765443
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.50 E-value=1.1e-05 Score=66.36 Aligned_cols=152 Identities=8% Similarity=-0.060 Sum_probs=98.4
Q ss_pred CeeEEEEeeCCCeEEEEec---CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC
Q 018806 146 DVKVLEWRPNGGRSLSVGC---KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP 222 (350)
Q Consensus 146 ~v~~~~~sp~~~~l~~~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 222 (350)
....+.|++++ .++.++. ++.|+++|+.+++....+.. ..+ .....+++
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-----------------------~~~--~fgeGi~~-- 73 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKM-----------------------DDS--YFGEGLTL-- 73 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEEC-----------------------CTT--CCEEEEEE--
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEec-----------------------CCC--cceEEEEE--
Confidence 46799999985 5555443 48999999985543332211 111 12233444
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCceeeeecC-CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc---cCC---
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGTPIRRGF-GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STS--- 295 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~--- 295 (350)
+++.|+.++..++.+.++|..+.+........ .. ...+++||+.++++..++.|+++|.++.+..... ...
T Consensus 74 ~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 74 LNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp ETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred eCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 46677777766679999999988766544322 22 2345668888887777889999999998864322 111
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 296 GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 296 ~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
..+..+.|. +| .|++....+..+..++.....
T Consensus 152 ~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 152 IRLNELEYI-NG-EVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp CCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCC
T ss_pred ccceeEEEE-CC-EEEEecCCCCeEEEEECCCCc
Confidence 236788888 66 566666555688888876544
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.47 E-value=6.9e-05 Score=63.49 Aligned_cols=194 Identities=13% Similarity=0.089 Sum_probs=108.9
Q ss_pred CeeEEEEecCCCEEEEEECCC--eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGST--QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~--~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
.+..++++++|+++++..... .|..++. .+++...............++..++ ..++++.. ++.|+++|.....
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~--~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVK--SDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEEC--TTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcC--CCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCc
Confidence 578999999999666544332 3444554 3344322221122223445555444 45555543 6878777765211
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC-CCc--eeeeecC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ-GLG--TPIRRGF 254 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~-~~~--~~~~~~~ 254 (350)
......... +.. ...... ......+ +|+++.|+.+...++.|..|++.. +.. .......
T Consensus 150 ~~v~~~~~~------~~~---------~~~~~~-~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~ 211 (306)
T 2p4o_A 150 GSIWLEHPM------LAR---------SNSESV-FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ 211 (306)
T ss_dssp EEEEEECGG------GSC---------SSTTCC-SCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES
T ss_pred EeEEEECCc------ccc---------ccccCC-CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc
Confidence 000000000 000 000000 0133445 788888877766556999999875 332 1122222
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec---cccCCCCeEEEEEc---CCCCEEEEEECC
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP---WSSTSGFVTGATWD---PEGRMILLAFAG 316 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~---~~~~~~~v~~~~~s---~~g~~l~~~~~~ 316 (350)
.....++++++|++.++....+.|.++|.. ++... +.......++++|. |+++.|+++..+
T Consensus 212 ~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 212 TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 356678999999876666667899999976 55422 22333568999999 899988887643
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.44 E-value=0.00062 Score=58.78 Aligned_cols=193 Identities=7% Similarity=-0.048 Sum_probs=124.4
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|++....|..+. ..+.|..++++. .. ...+..........+++.+.++.++.+.. .+.|.+.++. +..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g--~~-~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~ 149 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNG--SN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAH 149 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCS
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCC--CC-ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCc
Confidence 478999998777776655 567888888753 22 22222222345678999887677766655 4888888876 222
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-CeEEEEeCCCCCceeeee-cCCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-SSFTIWDVAQGLGTPIRR-GFGG 256 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g~i~iwd~~~~~~~~~~~-~~~~ 256 (350)
...+ +... ......++++|.+..|+.+.... +.|..+++.......+.. .-..
T Consensus 150 ~~~l------------------------~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 204 (349)
T 3v64_C 150 RKVL------------------------LWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 204 (349)
T ss_dssp CEEE------------------------ECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSC
T ss_pred eEEE------------------------EeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 1111 1111 24578999999777777665543 589999987654444332 3356
Q ss_pred eEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 257 LSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
...++|+|++..|+.+. ..+.|..+|++......+. ........+++ ++..|+.+..+...+..++
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEE
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCCCCeEEEEE
Confidence 78999999877776554 4678999998765443332 23445678888 3456777775556777776
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.42 E-value=0.00046 Score=59.59 Aligned_cols=195 Identities=8% Similarity=-0.026 Sum_probs=125.1
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCc
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 180 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~ 180 (350)
.+|.+..+++ +|+.+ ....|+..+++ +.....+. ........++|++.++.++.+.. .+.|+.+++.... ..
T Consensus 36 ~~C~~~~~~~-~ll~~-~~~~I~~i~~~---g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~ 108 (349)
T 3v64_C 36 RSCKALGPEP-VLLFA-NRIDIRQVLPH---RSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VE 108 (349)
T ss_dssp SCEEESSSCC-EEEEE-CBSCEEEECTT---SCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred CcccccccCc-eeEee-cccceEEEeCC---CCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC-ce
Confidence 4555555543 44443 44457777764 22223332 23345889999987677777665 4888888876322 11
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEE
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSI 259 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~ 259 (350)
.+. ... ......+++.+.+..|+.+....+.|.+.++.......+.. .......
T Consensus 109 ~~~------------------------~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~ 163 (349)
T 3v64_C 109 EVV------------------------STG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 163 (349)
T ss_dssp EEE------------------------CSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEE
T ss_pred EEE------------------------eCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcce
Confidence 111 111 13557899998777776665544699999988665444443 3356789
Q ss_pred EEEcCCCCEEEEEe-cC-CeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 260 LKWSPTGDYFFAAK-FD-GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 260 ~~~sp~g~~l~~~~-~d-~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
++++|.+..|+... .. +.|+.++++......+. ........++|+|++..|+.+..+...|..+++...
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 99999766665544 34 78999998765544433 234457899999999999998866678888887653
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.42 E-value=2.8e-05 Score=74.48 Aligned_cols=152 Identities=11% Similarity=-0.008 Sum_probs=97.9
Q ss_pred CeeEEEEe-eCCCeEEEEecC-C----cEEEEecCCC-CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeE
Q 018806 146 DVKVLEWR-PNGGRSLSVGCK-G----GICIWAPSYP-GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL 218 (350)
Q Consensus 146 ~v~~~~~s-p~~~~l~~~~~d-~----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 218 (350)
.+..++|| |||++++++... | .|+++|+..+ .... .. +. .....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~~---------------------~~----~~~~~~ 226 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---DK---------------------VS----GTNGEI 226 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC---CC---------------------EE----EECSCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC---cc---------------------cc----CceeeE
Confidence 67889999 999888876553 2 4899998854 2110 00 00 123578
Q ss_pred EECCCCCeEEEEEeCC----CeEEEEeCCCCCce--eeee--cCCCeEEEEEcCCCCEEEEEec---CCeEEEEeCCCCc
Q 018806 219 SWGPDGRYLASASYES----SSFTIWDVAQGLGT--PIRR--GFGGLSILKWSPTGDYFFAAKF---DGTFYLWETNTWT 287 (350)
Q Consensus 219 ~~sp~g~~l~~~~~d~----g~i~iwd~~~~~~~--~~~~--~~~~v~~~~~sp~g~~l~~~~~---d~~v~iwd~~~~~ 287 (350)
+|+|||+.|++...+. ..|+++++.+++.. .+.. .......+.|+|||++|+..+. ...|+++|+.+++
T Consensus 227 ~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 227 VWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp EECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred EEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence 9999999998887652 16888898877532 2322 2244668899999999876653 3478999998763
Q ss_pred --e--eccc-cCCCCeEEEEEcCCCCEEEEEECC----CeEEEEEEeC
Q 018806 288 --S--EPWS-STSGFVTGATWDPEGRMILLAFAG----SLTLGSIHFA 326 (350)
Q Consensus 288 --~--~~~~-~~~~~v~~~~~s~~g~~l~~~~~~----~~~~~~~~~~ 326 (350)
. ..+. .......++.|+. |+.|++.++. ...++.+++.
T Consensus 307 ~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 307 AHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp TCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCC
Confidence 3 3333 2344556666554 6666555532 3578888765
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.42 E-value=0.00052 Score=60.12 Aligned_cols=193 Identities=7% Similarity=-0.048 Sum_probs=122.9
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|++.+..|+.+. ..+.|..++++. .....+..........+++.+.++.|+.+.. .+.|.+.++. +..
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g---~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~ 192 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNG---SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAH 192 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS---CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCS
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCC---CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCc
Confidence 578999998776666654 567788888753 2222222222334678899887677766655 4777777765 221
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-CeEEEEeCCCCCceeeee-cCCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-SSFTIWDVAQGLGTPIRR-GFGG 256 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g~i~iwd~~~~~~~~~~~-~~~~ 256 (350)
...+ +... ......++++|.+..|+.+.... +.|..+++.......+.. .-..
T Consensus 193 ~~~l------------------------~~~~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 247 (386)
T 3v65_B 193 RKVL------------------------LWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 247 (386)
T ss_dssp CEEE------------------------ECSS-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred eEEe------------------------ecCC-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 1111 1111 24678999999877777766543 589999987655444433 3356
Q ss_pred eEEEEEcCCCCEEEEE-ecCCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 257 LSILKWSPTGDYFFAA-KFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~-~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
...++|+|++..|+.+ ...+.|..+|++......+. ........+++ ++..|+.+..+...|..++
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEE
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEE
Confidence 7899999887777655 44678999998765443332 23345678888 3446776765556777776
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.41 E-value=0.00064 Score=57.80 Aligned_cols=186 Identities=10% Similarity=0.032 Sum_probs=119.6
Q ss_pred EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCC---CCCceeeccccc
Q 018806 113 IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYP---GNAASVRSGAAS 188 (350)
Q Consensus 113 ~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~---~~~~~~~~~~~~ 188 (350)
+|+.+ ....|+..+++. ......+ ........++|++.++.++.+.. .+.|..+++... .....+
T Consensus 3 ~ll~~-~~~~I~~i~~~~--~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~------ 71 (316)
T 1ijq_A 3 YLFFT-NRHEVRKMTLDR--SEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------ 71 (316)
T ss_dssp EEEEE-CBSSEEEEETTS--CCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE------
T ss_pred EEEEE-CCCeEEEEECCC--cceEehh--cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE------
Confidence 34444 345688888864 2222222 23456889999998777777766 488888887631 111110
Q ss_pred ccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEEEEcCCCC
Q 018806 189 FLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSILKWSPTGD 267 (350)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~ 267 (350)
+... ......+++.+.+..|+.+...++.|.+++........+.. .......++++|.+.
T Consensus 72 ------------------~~~~-~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 72 ------------------ISRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 132 (316)
T ss_dssp ------------------ECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred ------------------EeCC-CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC
Confidence 1111 13567899988776776665444699999988655444443 346678999999777
Q ss_pred EEEEEecC--CeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 268 YFFAAKFD--GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 268 ~l~~~~~d--~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
.|+.+... +.|..++++......+. ..-.....+++++++..|+.+......|..+++...
T Consensus 133 ~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 133 FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 66555443 68999988754443332 234567899999999999988866678888887643
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.38 E-value=0.00076 Score=57.33 Aligned_cols=198 Identities=5% Similarity=-0.079 Sum_probs=122.2
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCC-CCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSE-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
.+.+++|++++..|+.+. ..+.|..++++... +.....+....-.....+++.+.++.++.+.. .+.|.+.++. +.
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~-g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC-CC
Confidence 478999999876666655 46788888875310 01222222222235688999876666666654 5889988876 22
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-CeEEEEeCCCCCceeeee-cCC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-SSFTIWDVAQGLGTPIRR-GFG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g~i~iwd~~~~~~~~~~~-~~~ 255 (350)
....+ +... ......++++|.+..|+.+.... +.|...++.......+.. .-.
T Consensus 110 ~~~~~------------------------~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~ 164 (316)
T 1ijq_A 110 KRKTL------------------------FREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 164 (316)
T ss_dssp SEEEE------------------------EECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred ceEEE------------------------EECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCC
Confidence 11111 1111 24678999999777776665542 589988887544433332 335
Q ss_pred CeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceecccc---CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 256 GLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSS---TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
....+++++++..|+.+. ..+.|..+|++......+.. .......+++. +..|+.+..+...+..++..
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCC
Confidence 678999999887776654 46799999998654443322 22346778874 45677776555677777653
No 250
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.36 E-value=1e-07 Score=83.46 Aligned_cols=168 Identities=12% Similarity=-0.053 Sum_probs=83.9
Q ss_pred EecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCee-EEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecc
Q 018806 107 WHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVK-VLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSG 185 (350)
Q Consensus 107 ~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 185 (350)
+..++..+++++.|+.++.||..+ ++............+. +..+. ++..+++++.++.++.||...++....+.
T Consensus 45 ~~~~g~~~v~~s~dg~l~a~d~~t--G~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~-- 119 (369)
T 2hz6_A 45 THVEEPAFLPDPNDGSLYTLGSKN--NEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS-- 119 (369)
T ss_dssp -----CCEEECTTTCCEEEC-------CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-----------
T ss_pred eEcCCCEEEEeCCCCEEEEEECCC--CceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec--
Confidence 345677777778999999999854 4433333211111111 11111 23566667778999999998554422211
Q ss_pred cccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCC
Q 018806 186 AASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPT 265 (350)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 265 (350)
.+ . ...++|++..+++++.+ |.|+.||.++++........ .....+++.+
T Consensus 120 -----------------------~~--~---~~~~~p~~~~v~~~~~d-g~v~a~d~~tG~~~W~~~~~-~~~~~~~~~~ 169 (369)
T 2hz6_A 120 -----------------------SA--F---ADSLSPSTSLLYLGRTE-YTITMYDTKTRELRWNATYF-DYAASLPEDD 169 (369)
T ss_dssp -----------------------------------------EEEEEEE-EEEECCCSSSSSCCCEEEEE-EECCBCCCCC
T ss_pred -----------------------CC--C---cccccccCCEEEEEecC-CEEEEEECCCCCEEEeEecc-cccCccccCC
Confidence 11 1 13456688888888888 69999999999765433211 1122333443
Q ss_pred C---CEEEEEecCCeEEEEeCCCCceeccccCCCCeE-EEEEcCCCCE
Q 018806 266 G---DYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVT-GATWDPEGRM 309 (350)
Q Consensus 266 g---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~-~~~~s~~g~~ 309 (350)
. ..+++++.||.|+.||.++++.........++. ...++++|..
T Consensus 170 ~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 170 VDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp TTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred ccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 2 457778889999999999998754333444443 3456667753
No 251
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.32 E-value=0.00051 Score=59.07 Aligned_cols=191 Identities=13% Similarity=0.121 Sum_probs=116.7
Q ss_pred CeeEEEEecCCCEEEEE------------ECCCeEEEEEccCCCCCcee-EecCC----CCCCeeEEEEee--CCC-eEE
Q 018806 101 DLQGVSWHQHKHIVAFI------------SGSTQVIVRDYEDSEGKDAC-ILTSD----SQRDVKVLEWRP--NGG-RSL 160 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~------------s~d~~i~iw~~~~~~~~~~~-~~~~~----~~~~v~~~~~sp--~~~-~l~ 160 (350)
..-.+...|+|..++++ ..+|.|.++|.+..+.+... .+... .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 35567778887655444 16899999998643332211 12111 123567777766 343 344
Q ss_pred EEec---CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe-----
Q 018806 161 SVGC---KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY----- 232 (350)
Q Consensus 161 ~~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~----- 232 (350)
++.. +.++.+|++...+. ...+...+.+.......++++.++|+++++...
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~---------------------~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~ 189 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEK---------------------SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDP 189 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTT---------------------EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSH
T ss_pred EEECCCCCCeEEEEEEECCCC---------------------EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCc
Confidence 4433 36777887764332 122344455544457889999999987766431
Q ss_pred -----------CCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCC-Cce--eccccCCCC
Q 018806 233 -----------ESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNT-WTS--EPWSSTSGF 297 (350)
Q Consensus 233 -----------d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~-~~~--~~~~~~~~~ 297 (350)
..|.|..+|. ++...+...-.....++|+||++.|+.+. ..+.|+.|+++. ++. .......+.
T Consensus 190 ~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~ 267 (355)
T 3sre_A 190 YLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTL 267 (355)
T ss_dssp HHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSE
T ss_pred ccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCC
Confidence 1245666654 44444444456788999999999887665 578999999863 433 122234566
Q ss_pred eEEEEEcC-CCCEEEEEE
Q 018806 298 VTGATWDP-EGRMILLAF 314 (350)
Q Consensus 298 v~~~~~s~-~g~~l~~~~ 314 (350)
.-.++..+ +|++.+++.
T Consensus 268 PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEECTTTCCEEEEEE
T ss_pred CceEEEeCCCCcEEEEec
Confidence 78899999 598877554
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.00099 Score=58.65 Aligned_cols=190 Identities=11% Similarity=0.010 Sum_probs=123.1
Q ss_pred CEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeeccccccc
Q 018806 112 HIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFL 190 (350)
Q Consensus 112 ~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~ 190 (350)
.+|+.+ ....|+..+++. ... ..+. .....+..++|++.++.++.+.. .+.|+.+++.........
T Consensus 84 ~~ll~~-~~~~I~~i~l~~--~~~-~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~-------- 150 (400)
T 3p5b_L 84 AYLFFT-NRHEVRKMTLDR--SEY-TSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-------- 150 (400)
T ss_dssp CEEEEE-ETTEEEEECTTS--CSC-EEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCC--------
T ss_pred ceeEEe-ccceeEEEccCC--cce-eEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcc--------
Confidence 345544 446788888753 222 2222 34567899999997677777665 488888887621100000
Q ss_pred ceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEEEEcCCCCEE
Q 018806 191 GALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSILKWSPTGDYF 269 (350)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l 269 (350)
...+... ......+++.+.+..|+.+....+.|.+.+++......+.. .......+++.|.+.+|
T Consensus 151 -------------~~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~l 216 (400)
T 3p5b_L 151 -------------DTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM 216 (400)
T ss_dssp -------------EEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEE
T ss_pred -------------eEEEeCC-CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeE
Confidence 0001111 24678899998667777666554699999998766555443 34568899999977777
Q ss_pred EEEec--CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 270 FAAKF--DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 270 ~~~~~--d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
+.... .+.|+..+++......+. ..-.....+++++++..|+.+......|+.+++...
T Consensus 217 y~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 217 YWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 65543 368999998765554443 233567899999999999999866678888887654
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=0.00045 Score=60.56 Aligned_cols=194 Identities=8% Similarity=-0.018 Sum_probs=123.5
Q ss_pred eEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCce
Q 018806 103 QGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAAS 181 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~ 181 (350)
+|.+..+. .+|+.+ ....|+.++++. .. ...+. ........++|.+.++.|+.+.. .+.|+.+++.... ...
T Consensus 80 ~C~~~~~~-~~l~~~-~~~~I~~i~~~~--~~-~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~ 152 (386)
T 3v65_B 80 SCKALGPE-PVLLFA-NRIDIRQVLPHR--SE-YTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEE 152 (386)
T ss_dssp CEEECSSC-CEEEEE-CBSCEEEECTTS--CC-CEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-EEE
T ss_pred eECCcccc-ceeEee-cCccceeeccCC--Cc-EEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-cEE
Confidence 34444443 345443 445677777753 22 22222 23346889999987677777665 4888888876221 111
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEE
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSIL 260 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~ 260 (350)
+ +... ......+++.+.+..|+.+....+.|.+.++.......+.. .......+
T Consensus 153 ~------------------------~~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~gi 207 (386)
T 3v65_B 153 V------------------------VSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 207 (386)
T ss_dssp E------------------------ECSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEE
T ss_pred E------------------------EeCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEE
Confidence 1 1111 13557889998777776665544689999987665444443 33668899
Q ss_pred EEcCCCCEEEEEe-cC-CeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 261 KWSPTGDYFFAAK-FD-GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 261 ~~sp~g~~l~~~~-~d-~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
+++|.+..|+... .. +.|+.++++......+. ........++|+|++..|+.+......|+.+++...
T Consensus 208 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 208 ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 9999777766554 34 68999998765544333 233457899999999999998866678888876543
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.26 E-value=0.00023 Score=60.18 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=105.6
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC--cEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG--GICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~v~iwd~~~~~~ 178 (350)
....++|+++|+++++-..++.|..|+.+ +....... .......+++.++|+.+++....+ .|..++...+.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~---g~~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~- 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPD---GNQQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT- 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT---CCEEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCC---CceEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-
Confidence 36789999999966665578888888864 33222222 235688999999977444433333 35555544221
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee-e------
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI-R------ 251 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~-~------ 251 (350)
...+ ..+.. ......++..+++..+++.... |.|+.+|..++..... .
T Consensus 107 ~~~~----------------------~~~~~--~~~~~g~~~~~~~~~~v~d~~~-g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 107 VETL----------------------LTLPD--AIFLNGITPLSDTQYLTADSYR-GAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp EEEE----------------------EECTT--CSCEEEEEESSSSEEEEEETTT-TEEEEEETTTTEEEEEEECGGGSC
T ss_pred EEEE----------------------EeCCC--ccccCcccccCCCcEEEEECCC-CeEEEEeCCCCcEeEEEECCcccc
Confidence 1111 01111 1223445555554434333335 6999999876422111 0
Q ss_pred ----ecCCCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCC-Cce--eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 018806 252 ----RGFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNT-WTS--EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSI 323 (350)
Q Consensus 252 ----~~~~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~-~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~ 323 (350)
........+ ++++++|+++. ..+.|+.|++.. ++. ............++++++|++. ++......+..+
T Consensus 162 ~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~-va~~~~~~V~~~ 238 (306)
T 2p4o_A 162 SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY-GATHIYNSVVRI 238 (306)
T ss_dssp SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE-EECBTTCCEEEE
T ss_pred ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEE-EEeCCCCeEEEE
Confidence 011234445 88888776554 567999999875 433 1111112345778999999754 454333445555
Q ss_pred Ee
Q 018806 324 HF 325 (350)
Q Consensus 324 ~~ 325 (350)
+.
T Consensus 239 ~~ 240 (306)
T 2p4o_A 239 AP 240 (306)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.24 E-value=0.00013 Score=59.54 Aligned_cols=151 Identities=13% Similarity=0.003 Sum_probs=94.8
Q ss_pred CCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC
Q 018806 145 RDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG 224 (350)
Q Consensus 145 ~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 224 (350)
.....+.|+. +..+++.+.++.|+++|+.+++....+ . . .........+++
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-----------------------~----~~~FgeGit~~g 105 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-----------------------L----GNIFAEGLASDG 105 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-----------------------C----TTCCEEEEEECS
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-----------------------C----CCcceeEEEEeC
Confidence 3457888873 244444444688999999866554433 1 1 233332233456
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc---cCC---CCe
Q 018806 225 RYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STS---GFV 298 (350)
Q Consensus 225 ~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~---~~v 298 (350)
+.|+.....++.+.+||.++.+..........-..++ +|++.|+.+..++.|+++|.++.+..... ... ..+
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 6776666555799999999988776554433333444 57888888777889999999998874322 222 234
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 299 TGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 299 ~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
..+.|. +|+ |.+..-.+..+..++....
T Consensus 184 NeLe~~-dG~-lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 184 NELECA-NGV-IYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp EEEEEE-TTE-EEEEETTCSEEEEECTTTC
T ss_pred cccEEe-CCE-EEEEECCCCeEEEEeCCCC
Confidence 667777 664 5556544456777766543
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.24 E-value=0.0007 Score=57.56 Aligned_cols=188 Identities=11% Similarity=0.045 Sum_probs=120.4
Q ss_pred EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccc
Q 018806 113 IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLG 191 (350)
Q Consensus 113 ~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~ 191 (350)
+|+. +....|+.++++...... .... ........++|.+.++.++.+.. .+.|..+++........+..
T Consensus 6 ~ll~-~~~~~I~~i~l~~~~~~~-~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~------- 75 (318)
T 3sov_A 6 LLLY-ANRRDLRLVDATNGKENA-TIVV-GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------- 75 (318)
T ss_dssp EEEE-ECEEEEEEEETTCTTSCC-EEEE-EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-------
T ss_pred EEEE-EccCeEEEEECCCCceEE-EEEe-cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-------
Confidence 3444 345678888886432111 2221 12235778999987677776665 48888888763321111100
Q ss_pred eecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeEEEEEcCCCCEEE
Q 018806 192 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLSILKWSPTGDYFF 270 (350)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~ 270 (350)
.. ......+++.+.+..|+.+....+.|.++++.......+. ........+++.|.+..|+
T Consensus 76 -----------------~~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly 137 (318)
T 3sov_A 76 -----------------SG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY 137 (318)
T ss_dssp -----------------EC-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred -----------------CC-CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEE
Confidence 00 1356789998866666666544469999999866544443 3346678999999766666
Q ss_pred EEec--CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 271 AAKF--DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 271 ~~~~--d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
.... .+.|+.++++......+. ..-.....++|++++..|+.+......|+.+++...
T Consensus 138 ~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 138 WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 5552 578999988754443332 223456899999999999999877778888887653
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.21 E-value=0.00014 Score=59.24 Aligned_cols=152 Identities=11% Similarity=0.047 Sum_probs=94.2
Q ss_pred CCeeEEEEeeCCCeEEEEecCC--cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC
Q 018806 145 RDVKVLEWRPNGGRSLSVGCKG--GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP 222 (350)
Q Consensus 145 ~~v~~~~~sp~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 222 (350)
.....+.|+ ++..+.+.|.+| .|+++|+.+++....+.. +.........+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l---------------------------~~~~FgeGit~ 94 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL---------------------------GKRYFGEGISD 94 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC---------------------------CTTCCEEEEEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec---------------------------CCccceeEEEE
Confidence 345888998 644444555554 899999985543332211 12333333444
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc---cCC---C
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STS---G 296 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~---~ 296 (350)
++..|+.....++.+.+||.++.+..........-..+ ++|++.|+.+..++.|+++|..+.+..... ... .
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 56777777765579999999998877655443322333 467888877766788999999998874322 222 2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 297 FVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 297 ~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
.+..+.|. +|+ |.+..-.+..+..++....
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTTC
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCCC
Confidence 34557776 664 5556644456777765443
No 258
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.19 E-value=0.0023 Score=59.73 Aligned_cols=189 Identities=9% Similarity=0.041 Sum_probs=127.9
Q ss_pred CEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeeccccccc
Q 018806 112 HIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFL 190 (350)
Q Consensus 112 ~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~ 190 (350)
.+|+.+ ....|+..+++. ......+....-..+..++|++.++.++.+.. ++.|+.+++. +.....+.
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~--~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~-g~~~~~v~------- 75 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLET--NNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMN-GSALEHVV------- 75 (628)
T ss_dssp CEEEEE-ETTEEEEEESSC--TTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE-------
T ss_pred cEEEEE-eCCcEEEEECCC--CCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECC-CCCcEEEE-------
Confidence 355554 567788889864 22222222223356889999998777777665 4888888876 22211111
Q ss_pred ceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeEEEEEcCCCCEE
Q 018806 191 GALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLSILKWSPTGDYF 269 (350)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~g~~l 269 (350)
... ......+++.+.+..|+.+....+.|.+.++.......+. ..-.....+++.|....|
T Consensus 76 -----------------~~g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~l 137 (628)
T 4a0p_A 76 -----------------EFG-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFM 137 (628)
T ss_dssp -----------------CSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEE
T ss_pred -----------------eCC-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeE
Confidence 111 1356789998887777777665579999999866554444 334567899999966566
Q ss_pred EEEec--CCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 270 FAAKF--DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 270 ~~~~~--d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
+.... .+.|...+++......+.........++++++++.|+.+..+...+..+++....
T Consensus 138 Y~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 138 YWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp EEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 55542 5688888888766655555556788999999999999998777788888886543
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00046 Score=61.39 Aligned_cols=197 Identities=10% Similarity=0.080 Sum_probs=111.4
Q ss_pred cCeeEEEEecCCCEEEEEECC-C----eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEec
Q 018806 100 VDLQGVSWHQHKHIVAFISGS-T----QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAP 173 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d-~----~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~ 173 (350)
.....++|+++|++|+.+... + .+.+.+.+ ........+. .......++++|++..++++.. .+.|..++.
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 357899999999977666542 1 23333432 1111111221 1234677889994455665554 588888887
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC--Cc---e
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG--LG---T 248 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~--~~---~ 248 (350)
..... .. ...... ......++|+|+|++|+.+...++.|..++.... .. .
T Consensus 256 ~~~~~-~~----------------------~~~~~~--~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 256 TTQET-TP----------------------LFTIQD--SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp TTTEE-EE----------------------EEECSS--SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred CCCcE-EE----------------------EEEcCC--CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 62211 00 001111 1356789999999977776655469999876532 11 1
Q ss_pred eeeec---------------CCCeE-EEEEc--------CCCCEEEEEecCCeEEEEeCCCCceeccccC----------
Q 018806 249 PIRRG---------------FGGLS-ILKWS--------PTGDYFFAAKFDGTFYLWETNTWTSEPWSST---------- 294 (350)
Q Consensus 249 ~~~~~---------------~~~v~-~~~~s--------p~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~---------- 294 (350)
.+... -.... .++.. ++|.+.++-..++.|+.++ .+++...+.+.
T Consensus 311 ~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~d 389 (430)
T 3tc9_A 311 IVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYND 389 (430)
T ss_dssp EEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBC
T ss_pred EEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccC
Confidence 11111 01122 44443 3455555555677899888 44555433221
Q ss_pred --------CCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 295 --------SGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 295 --------~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
-.....++++|++..|+++..+...+..+..
T Consensus 390 G~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 390 GDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 1257899999976677777755556766654
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.14 E-value=0.00013 Score=65.01 Aligned_cols=154 Identities=12% Similarity=0.139 Sum_probs=97.4
Q ss_pred CeeEEEEee-CCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC
Q 018806 146 DVKVLEWRP-NGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG 224 (350)
Q Consensus 146 ~v~~~~~sp-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 224 (350)
....++|+| +++.|+++...+.|+.+|+... .... +.. .......++|+++|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~~-------------------------~~~-~~~~P~~ia~d~~G 190 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVST-------------------------VYS-GLSKVRTICWTHEA 190 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEEE-------------------------EEC-CCSCEEEEEECTTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEEE-------------------------Eec-CCCCcceEEEeCCC
Confidence 457889997 4456666555577777877621 1111 111 12468899999999
Q ss_pred CeEEEEEeCCC----eEEEEeCCCCCce--eeeecCCCeEEEEEcC-CCCEEEEEecCCeEEEEeCCCCceeccc--cCC
Q 018806 225 RYLASASYESS----SFTIWDVAQGLGT--PIRRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEPWS--STS 295 (350)
Q Consensus 225 ~~l~~~~~d~g----~i~iwd~~~~~~~--~~~~~~~~v~~~~~sp-~g~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~ 295 (350)
++|+.+...++ .+.+++.. +... ...........++++| +|.++++-..++.|+.++..++....+. ...
T Consensus 191 ~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~ 269 (430)
T 3tc9_A 191 DSMIITNDQNNNDRPNNYILTRE-SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS 269 (430)
T ss_dssp SEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred CEEEEEeCCCCcccceEEEEeCC-CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC
Confidence 97777665212 34444433 3222 2222234567788999 6766666666789999999877653322 222
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 296 GFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 296 ~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.....++|+|+|++|+++......++.++...
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 45688999999998888876666777776653
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.13 E-value=0.0038 Score=54.93 Aligned_cols=198 Identities=5% Similarity=-0.064 Sum_probs=123.4
Q ss_pred cCeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCC-CceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCC
Q 018806 100 VDLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEG-KDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~ 176 (350)
..+.+++|++.+..|..+. ..+.|+.++++.... .....+..........+++.+.++.|+.+.. .+.|.+.+++ +
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g 190 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-G 190 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-T
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-C
Confidence 3688999999777777665 467788888753110 1122222223456788999886566666655 4888888876 2
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-CCeEEEEeCCCCCceeeee-cC
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-SSSFTIWDVAQGLGTPIRR-GF 254 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~g~i~iwd~~~~~~~~~~~-~~ 254 (350)
.....+ +... ......+++.|.+..|+.+... .+.|...++.......+.. .-
T Consensus 191 ~~~~~l------------------------~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l 245 (400)
T 3p5b_L 191 VKRKTL------------------------FREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 245 (400)
T ss_dssp CSEEEE------------------------EECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred CceEEE------------------------EeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence 221111 1111 2457899999977777666532 2589999988665544433 33
Q ss_pred CCeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceecccc---CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 255 GGLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSS---TSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
.....+++++++..|+.+. ..+.|..+|++......+.. .......++. ++..|+.+..+...|..++.
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEES
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEc
Confidence 6788999999888877664 46789999998665544332 2234556666 45567766655556777763
No 262
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.09 E-value=0.00048 Score=58.03 Aligned_cols=181 Identities=7% Similarity=0.074 Sum_probs=111.1
Q ss_pred EEEecCCCEEEEEECC--------------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEe--cCCcE
Q 018806 105 VSWHQHKHIVAFISGS--------------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVG--CKGGI 168 (350)
Q Consensus 105 v~~sp~g~~la~~s~d--------------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~v 168 (350)
--++++|++|+.+... ..|+..+++. +. ...+.. . ....|+++++.++.+. .++.-
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg--~~-~~~l~~---~--~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG--HG-STVLDP---D--PCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS--CC-CEEEEC---S--CEEEEEEETTEEEEEEESSSSCE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC--Cc-ceEeec---C--CccEEEEeCCEEEEEeecCCCCc
Confidence 4568999999988653 3455555542 32 233321 1 2237888988888876 24444
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT 248 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~ 248 (350)
.||.+...+..... +..+ .+ .+|+++++.|+..+....+|...++..+...
T Consensus 130 ~Iy~~~~dGs~~~~------------------------lt~~---~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 130 SLYRIRIDGEEKKK------------------------IKNH---YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEEEETTSCCCEE------------------------EESS---CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred eEEEEECCCCCeEE------------------------EeCC---Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 45544432221111 1111 12 4567889999887764358999998877655
Q ss_pred eeeecCCCeEEEEEcCCCCEEEEEecC--CeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEe
Q 018806 249 PIRRGFGGLSILKWSPTGDYFFAAKFD--GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 249 ~~~~~~~~v~~~~~sp~g~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~ 325 (350)
.+.. +... ..++|++.+|+-...+ ..|..-+++......+... .+ ..|+|+|++|+.+. .....++.+.+
T Consensus 181 ~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 181 LFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA--NI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS--CE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred EEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC--Cc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 5543 2232 3466999998876543 3687888887766555432 23 34889999998875 33467888888
Q ss_pred CCCC
Q 018806 326 ASKP 329 (350)
Q Consensus 326 ~~~~ 329 (350)
....
T Consensus 254 DG~~ 257 (302)
T 3s25_A 254 DGTG 257 (302)
T ss_dssp TSCC
T ss_pred CCCc
Confidence 7654
No 263
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0032 Score=60.25 Aligned_cols=198 Identities=6% Similarity=-0.057 Sum_probs=124.9
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCC-CceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEG-KDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
.+.+|+|++....|+.+. ..+.|+.++++.... .....+..........|++.+.++.|+.+.. .+.|.+.++. +.
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~ 503 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GV 503 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CC
Confidence 578899999766666554 457788888753111 1112222223456778999988777777666 4888888876 22
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-CeEEEEeCCCCCceeeeec-CC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-SSFTIWDVAQGLGTPIRRG-FG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g~i~iwd~~~~~~~~~~~~-~~ 255 (350)
....+ +.. .......|++.|.+.+|+.+.... +.|...++.......+... -.
T Consensus 504 ~~~~l------------------------~~~-~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 504 KRKTL------------------------FRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp SEEEE------------------------EEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred eEEEE------------------------EeC-CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 21111 111 124678999999877777665432 4899999886655544433 36
Q ss_pred CeEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccccC---CCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 256 GLSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSST---SGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
....|++++.+..|+.+. ..+.|..++++......+... -.....|++ .+..|+.+......|+.++..
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCC
Confidence 788999998877776664 456899999977655444321 223445665 456888887666778877754
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0037 Score=53.05 Aligned_cols=196 Identities=7% Similarity=-0.040 Sum_probs=122.2
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|++.+..|..+. ..+.|..++++...... .... ..-.....+++.+.++.++.+.. .+.|.++++. +..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~-~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~ 112 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVV-SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSL 112 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-EEEE-ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCS
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-EEEc-CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC-CCc
Confidence 467899999766666554 56788888875321111 1221 12235678899876666666655 5888888876 222
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe-CCCeEEEEeCCCCCceeeee-cCCC
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY-ESSSFTIWDVAQGLGTPIRR-GFGG 256 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~g~i~iwd~~~~~~~~~~~-~~~~ 256 (350)
...+. ... ......+++.|.+..|+.+.. ..+.|...++.......+.. .-..
T Consensus 113 ~~~l~------------------------~~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 113 RKVLF------------------------WQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp CEEEE------------------------CSS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEE------------------------eCC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 11111 111 246789999997767766653 23589999987554444332 3356
Q ss_pred eEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceecccc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 257 LSILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSS-TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
...++|++++..|+.+. ..+.|..+|++......+.. .......+++. +..|+.+.-+...+..++..
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECC
Confidence 78999999877776654 46799999997655443332 34456677775 44666666555677777764
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.06 E-value=0.0004 Score=65.47 Aligned_cols=72 Identities=10% Similarity=0.048 Sum_probs=48.4
Q ss_pred eEEEEec-CCCEEEEEECCC-----------eEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC-CcEE
Q 018806 103 QGVSWHQ-HKHIVAFISGST-----------QVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGIC 169 (350)
Q Consensus 103 ~~v~~sp-~g~~la~~s~d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~~v~ 169 (350)
..+++.+ ++++++.|+.+. .+.+||..+.+-.........+.....++++.+++..++++|.+ ..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3567777 888888887543 57788886654444443433344445567888887777777754 7899
Q ss_pred EEecC
Q 018806 170 IWAPS 174 (350)
Q Consensus 170 iwd~~ 174 (350)
+||..
T Consensus 269 ~yd~~ 273 (656)
T 1k3i_A 269 LYDSS 273 (656)
T ss_dssp EEEGG
T ss_pred EecCc
Confidence 99987
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.05 E-value=0.0007 Score=57.04 Aligned_cols=160 Identities=14% Similarity=0.098 Sum_probs=105.4
Q ss_pred CCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeecc--CCCCCceeeEEE
Q 018806 144 QRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR--SQNGEQITALSW 220 (350)
Q Consensus 144 ~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~ 220 (350)
..--.+++|.+...+++.+.. .++|..|+...+.. ..+... .+. +.....+..+.|
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~--------------------~~s~~g~~~~~~sGl~~ 70 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-FNVVID--------------------GASSNGDGEQQMSGLSL 70 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-EEECCT--------------------TTCCSSCCSEEEEEEEE
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-EEEecC--------------------CccccCCCcceeeEEEE
Confidence 344567899987677777664 79999999862211 111000 001 111124578999
Q ss_pred ---CCCCCeEEEEEe-------------CCCeEEEEeCC---CCCceeeee--------------cCCCeEEEEEcCCCC
Q 018806 221 ---GPDGRYLASASY-------------ESSSFTIWDVA---QGLGTPIRR--------------GFGGLSILKWSPTGD 267 (350)
Q Consensus 221 ---sp~g~~l~~~~~-------------d~g~i~iwd~~---~~~~~~~~~--------------~~~~v~~~~~sp~g~ 267 (350)
.|+++.+++... + ..+..||+. +++...... .......++..++|+
T Consensus 71 ~~~D~~grL~vv~~~~~af~~~g~~~~g~-~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn 149 (334)
T 2p9w_A 71 LTHDNSKRLFAVMKNAKSFNFADQSSHGA-SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN 149 (334)
T ss_dssp SSSSSCCEEEEEEEETTTTCTTSCCSSSC-CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC
T ss_pred eccCCCCcEEEEEcccccccccccccCCC-CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC
Confidence 688877776432 4 489999999 676554332 112477899999999
Q ss_pred EEEEEecC-CeEEEEeCCCCceecccc------CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 268 YFFAAKFD-GTFYLWETNTWTSEPWSS------TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 268 ~l~~~~~d-~~v~iwd~~~~~~~~~~~------~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
..++++.. +.|...+.+......+.. .....+.|+++|+|+.|++... ...++.+++.
T Consensus 150 aYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 150 SYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp EEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred EEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 98988888 888888777554433221 1223679999999999998766 6678888766
No 267
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.04 E-value=0.00018 Score=61.25 Aligned_cols=176 Identities=11% Similarity=0.052 Sum_probs=99.7
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
+.++...+++. |..++.++.+..+|.. ++...... .....+.++...+++. +.+++ +.+..+| ......
T Consensus 139 ~~~~~~~~~g~-l~vgt~~~~l~~~d~~---g~~~~~~~-~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~-- 207 (330)
T 3hxj_A 139 YATPIVSEDGT-IYVGSNDNYLYAINPD---GTEKWRFK-TNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGTEK-- 207 (330)
T ss_dssp CSCCEECTTSC-EEEECTTSEEEEECTT---SCEEEEEE-CSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSCEE--
T ss_pred eeeeEEcCCCE-EEEEcCCCEEEEECCC---CCEeEEEe-cCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEE--
Confidence 45556666666 4446667778787764 33333332 2334566666666643 44444 7777777 322211
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeEEE
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLSIL 260 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~~~ 260 (350)
+. .... ...+.++...++|. |..++.+ |.+..+|. ++...... .....+..+
T Consensus 208 ----------------------~~-~~~~-~~~~~~~~~~~~g~-l~v~t~~-~gl~~~~~-~g~~~~~~~~~~~~~~~~ 260 (330)
T 3hxj_A 208 ----------------------WN-FYAG-YWTVTRPAISEDGT-IYVTSLD-GHLYAINP-DGTEKWRFKTGKRIESSP 260 (330)
T ss_dssp ----------------------EE-ECCS-SCCCSCCEECTTSC-EEEEETT-TEEEEECT-TSCEEEEEECSSCCCSCC
T ss_pred ----------------------EE-EccC-CcceeceEECCCCe-EEEEcCC-CeEEEECC-CCCEeEEeeCCCCccccc
Confidence 11 1111 14577888888875 4455566 58888875 34433322 223334455
Q ss_pred EEcCCCCEEEEEecCCeEEEEeCCCCcee-ccccCCCCeEEEEEcCCCCEEEEEECCC
Q 018806 261 KWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGS 317 (350)
Q Consensus 261 ~~sp~g~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~~~ 317 (350)
.+.+++ .|..++.++.|..+|. +++.. ........+.++...++|+..+.+.++.
T Consensus 261 ~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 261 VIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp EECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSC
T ss_pred eEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCe
Confidence 666566 4666777888999996 55543 2323345567778888888666333443
No 268
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.04 E-value=0.0045 Score=59.27 Aligned_cols=190 Identities=11% Similarity=0.016 Sum_probs=122.7
Q ss_pred EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccc
Q 018806 113 IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLG 191 (350)
Q Consensus 113 ~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~ 191 (350)
+|+. +....|+..+++. ... ..+. .....+..++|.+..+.|+.+.. .+.|+.+++.........
T Consensus 397 ~Ll~-an~~~Ir~i~l~~--~~~-~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~--------- 462 (791)
T 3m0c_C 397 YLFF-TNRHEVRKMTLDR--SEY-TSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--------- 462 (791)
T ss_dssp EEEE-ECBSSEEEECTTS--CCC-EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C---------
T ss_pred cccc-ccccceeEeeccC--Ccc-eeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcce---------
Confidence 4444 3445677777753 222 2222 23456889999987667766665 478888887622110000
Q ss_pred eecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEEEEcCCCCEEE
Q 018806 192 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSILKWSPTGDYFF 270 (350)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~ 270 (350)
...+... ......|++.+.++.|+.+....+.|.+.++.......+.. .......|++.|.+.+|+
T Consensus 463 ------------~~vi~~~-l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LY 529 (791)
T 3m0c_C 463 ------------DTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMY 529 (791)
T ss_dssp ------------EEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEE
T ss_pred ------------eEEEecC-CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEE
Confidence 0011111 24667899998888888776665799999998766555443 345688999999876776
Q ss_pred EEec--CCeEEEEeCCCCceecccc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 271 AAKF--DGTFYLWETNTWTSEPWSS-TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 271 ~~~~--d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
.... .+.|.+.+++......+.. .-.....|++++.+..|+.+..+...|+.+++....
T Consensus 530 wtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 530 WTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 5543 3689999998766544443 335788999999999999887666788888876543
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.01 E-value=0.0014 Score=58.35 Aligned_cols=196 Identities=10% Similarity=0.099 Sum_probs=110.2
Q ss_pred CeeEEEEecCCCEEEEEECC----Ce-EEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecC
Q 018806 101 DLQGVSWHQHKHIVAFISGS----TQ-VIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPS 174 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d----~~-i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~ 174 (350)
...+++|+++|+ |+.+... .. +...+... .......+ ........++++|++..++.+.. ++.|+.++..
T Consensus 183 ~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~-~~~~~~~~--~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 183 QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS-GFTERLSL--CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG-TTCCEEEE--EECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CccEEEECCCCC-EEEEcCCCCcccceEEEEECCC-Ceeccccc--cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 488999999999 4444432 12 22223221 11100111 12234577889994455555554 5778888775
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC--CCc---ee
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ--GLG---TP 249 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~--~~~---~~ 249 (350)
.......+.. . +. ......++|+|+|++|+.+...++.|+.++... +.. ..
T Consensus 259 ~g~~~~~~~~----------------------~-~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~ 314 (433)
T 4hw6_A 259 TGTLTEEEVM----------------------M-DT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYI 314 (433)
T ss_dssp TCCEEEEEEE----------------------C-SC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEE
T ss_pred CCeEEEEEec----------------------c-CC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEE
Confidence 2221011100 0 01 123346999999997777765546999988652 321 11
Q ss_pred eeec---------------CCCeEEEEE---------cCCCCEEEEEecCCeEEEEeCCCCceeccccC-----------
Q 018806 250 IRRG---------------FGGLSILKW---------SPTGDYFFAAKFDGTFYLWETNTWTSEPWSST----------- 294 (350)
Q Consensus 250 ~~~~---------------~~~v~~~~~---------sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~----------- 294 (350)
+... -.....+++ .++|.+.++-..++.|+.++. ++....+.+.
T Consensus 315 ~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 315 VCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp EEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCE
T ss_pred EEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCC
Confidence 1111 123567899 677776666666789999985 4554333221
Q ss_pred -------CCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 295 -------SGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 295 -------~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
-.....++++|....|+++..+...|..+.+
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 1246789999555566667655556776654
No 270
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0056 Score=52.05 Aligned_cols=192 Identities=11% Similarity=0.140 Sum_probs=113.4
Q ss_pred CCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC----CCe--EEEEec----CCcEEEEecCCCCCC
Q 018806 110 HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN----GGR--SLSVGC----KGGICIWAPSYPGNA 179 (350)
Q Consensus 110 ~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----~~~--l~~~~~----d~~v~iwd~~~~~~~ 179 (350)
...+++.....+-+.+||+. ++.+..+. .+.++.+..-|+ |+. +++++. +++|.+|++.-....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~---G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD---GKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT---SCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcCC---CcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 34556666777889999994 66666653 256788877764 222 334433 378999988521111
Q ss_pred ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEE--CCC-CCe-EEEEEeCCCeEEEEeCC---CC----Cce
Q 018806 180 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW--GPD-GRY-LASASYESSSFTIWDVA---QG----LGT 248 (350)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~-g~~-l~~~~~d~g~i~iwd~~---~~----~~~ 248 (350)
+...... ...+.. ....+..+++ +|. ++. ++....+ |.+..|++. .+ +..
T Consensus 113 --l~~i~~~---------------~~pv~t-~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lV 173 (355)
T 3amr_A 113 --LQSMTDP---------------DHPIAT-AINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKV 173 (355)
T ss_dssp --EEECSCT---------------TSCEEC-CCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEE
T ss_pred --eeecccc---------------ccCcCC-CCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEE
Confidence 1111000 000000 0145677777 774 554 4444455 899999883 33 223
Q ss_pred eeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC-----Cceecccc---CCCCeEEEEE--cCCCC-EEEEEECCC
Q 018806 249 PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT-----WTSEPWSS---TSGFVTGATW--DPEGR-MILLAFAGS 317 (350)
Q Consensus 249 ~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~-----~~~~~~~~---~~~~v~~~~~--s~~g~-~l~~~~~~~ 317 (350)
..+...+.+..|...+....|+.+-++.-|..|+.+. ++...... ....+..|++ .++|+ +|++++.+.
T Consensus 174 R~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 174 RAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred EEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 3344457788999999888999999988888888652 23332222 2235788887 56777 788888555
Q ss_pred eEEEEEEeC
Q 018806 318 LTLGSIHFA 326 (350)
Q Consensus 318 ~~~~~~~~~ 326 (350)
.....++..
T Consensus 254 ~s~~Vydr~ 262 (355)
T 3amr_A 254 SSYAIYDRQ 262 (355)
T ss_dssp TEEEEEESS
T ss_pred CEEEEEECC
Confidence 555555553
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.93 E-value=0.00095 Score=61.79 Aligned_cols=79 Identities=18% Similarity=0.141 Sum_probs=51.7
Q ss_pred CeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCe--EEEEEcCCCCEEEE
Q 018806 235 SSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV--TGATWDPEGRMILL 312 (350)
Q Consensus 235 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v--~~~~~s~~g~~l~~ 312 (350)
|.|..||+.+++.............-.....+..++.++.|+.++.||.++++..-.......+ .-+.|..+|++.++
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 6899999999987654443333322222234667888999999999999999985333222222 23677788875554
Q ss_pred E
Q 018806 313 A 313 (350)
Q Consensus 313 ~ 313 (350)
.
T Consensus 546 ~ 546 (582)
T 1flg_A 546 V 546 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 272
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.93 E-value=0.0021 Score=51.82 Aligned_cols=152 Identities=11% Similarity=-0.025 Sum_probs=91.6
Q ss_pred CCCeeEEEEeeCCCeEEEEecC--CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEEC
Q 018806 144 QRDVKVLEWRPNGGRSLSVGCK--GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG 221 (350)
Q Consensus 144 ~~~v~~~~~sp~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 221 (350)
......+.|++ +..+.+.+.. ..|+++|+.+++....+.. . .........
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-----------------------~----~~~fgeGi~ 71 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV-----------------------P----PPYFGAGIV 71 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC-----------------------C----TTCCEEEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC-----------------------C----CCcceeEEE
Confidence 34567899986 3444444444 5899999985543322211 1 233333333
Q ss_pred CCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc---cCC---
Q 018806 222 PDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STS--- 295 (350)
Q Consensus 222 p~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~--- 295 (350)
+++..|+.....++.+.+||.++.+..........-..++ ++++.|+.+..++.|+++|.++.+..... .+.
T Consensus 72 ~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~ 149 (243)
T 3mbr_X 72 AWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPL 149 (243)
T ss_dssp EETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred EeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccc
Confidence 4466676666555799999999988776555444334444 57777877777889999999998874322 221
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 296 GFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 296 ~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
..+..+.|. +|+ |++..-.+..+..++...
T Consensus 150 ~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 150 DNLNELEWV-NGE-LLANVWLTSRIARIDPAS 179 (243)
T ss_dssp CCEEEEEEE-TTE-EEEEETTTTEEEEECTTT
T ss_pred ccceeeEEe-CCE-EEEEECCCCeEEEEECCC
Confidence 234556665 454 555553344566665543
No 273
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.93 E-value=0.00034 Score=66.07 Aligned_cols=105 Identities=13% Similarity=0.186 Sum_probs=70.2
Q ss_pred CCC---CeEEEEEeCCCeEEEEeCCCCCceeeeecC--C----------Ce------------------------EEEEE
Q 018806 222 PDG---RYLASASYESSSFTIWDVAQGLGTPIRRGF--G----------GL------------------------SILKW 262 (350)
Q Consensus 222 p~g---~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~--~----------~v------------------------~~~~~ 262 (350)
.+| +.++.++.+ |.++++|..+|+.+...... . .+ ..+++
T Consensus 322 ~dG~~~~~l~~~~~~-G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~ 400 (677)
T 1kb0_A 322 IAGKPRKVILHAPKN-GFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSF 400 (677)
T ss_dssp ETTEEEEEEEECCTT-SEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEE
T ss_pred cCCcEeeEEEEECCC-CEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceE
Confidence 467 567777777 79999999999865322210 0 00 14688
Q ss_pred cCCCCEEEEEecC-------------------------------------------CeEEEEeCCCCceeccccCCCCeE
Q 018806 263 SPTGDYFFAAKFD-------------------------------------------GTFYLWETNTWTSEPWSSTSGFVT 299 (350)
Q Consensus 263 sp~g~~l~~~~~d-------------------------------------------~~v~iwd~~~~~~~~~~~~~~~v~ 299 (350)
+|++.++++...+ +.|..||+.+++..-...+..++.
T Consensus 401 dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 480 (677)
T 1kb0_A 401 NPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWN 480 (677)
T ss_dssp ETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred cCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCc
Confidence 9988888765431 789999999999854444444555
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEEeCCC
Q 018806 300 GATWDPEGRMILLAFAGSLTLGSIHFASK 328 (350)
Q Consensus 300 ~~~~s~~g~~l~~~~~~~~~~~~~~~~~~ 328 (350)
...++.++..+++++ .+..++.++....
T Consensus 481 ~g~~~~~g~~v~~g~-~dg~l~a~D~~tG 508 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGT-ADGRLVAYHAATG 508 (677)
T ss_dssp CCEEEETTTEEEEEC-TTSEEEEEETTTC
T ss_pred CcceEeCCCEEEEEC-CCCcEEEEECCCC
Confidence 556777788887764 4456777776543
No 274
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.92 E-value=0.014 Score=54.38 Aligned_cols=196 Identities=7% Similarity=-0.064 Sum_probs=128.4
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 178 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~ 178 (350)
.+.+++|++.+..|..+. .++.|..++++. .....+..........+++.+.++.|+.+.. .+.|.+.++. +..
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g---~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~ 113 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNG---SALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQH 113 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-STT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCC---CCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCc
Confidence 578999999877777655 468888888752 2222222222245778999877777777665 4888888876 222
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC-CCeEEEEeCCCCCceeeeecCCCe
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE-SSSFTIWDVAQGLGTPIRRGFGGL 257 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-~g~i~iwd~~~~~~~~~~~~~~~v 257 (350)
...+. ... ......+++.|....|+.+... .+.|...++.......+...-...
T Consensus 114 ~~~l~------------------------~~~-l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P 168 (628)
T 4a0p_A 114 RQVLV------------------------WKD-LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRA 168 (628)
T ss_dssp CEEEE------------------------CSS-CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSE
T ss_pred EEEEE------------------------eCC-CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCc
Confidence 11111 011 2467899999966666665522 358998998876665555555678
Q ss_pred EEEEEcCCCCEEEEEe-cCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 258 SILKWSPTGDYFFAAK-FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
..++++++++.|+.+. ..+.|..+|++......+.........+++.. ..|+.+.-....+..++...
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTT
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCC
Confidence 8999999877776664 46789999998755543333344556777764 46777765556777777543
No 275
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.90 E-value=0.019 Score=55.32 Aligned_cols=192 Identities=9% Similarity=0.017 Sum_probs=121.6
Q ss_pred CCCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecC-----C-CCCCeeEEEEeeCCCeEEEEecCCcEE
Q 018806 96 LLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTS-----D-SQRDVKVLEWRPNGGRSLSVGCKGGIC 169 (350)
Q Consensus 96 ~~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~-----~-~~~~v~~~~~sp~~~~l~~~~~d~~v~ 169 (350)
.+....|.++...++|.+- .|+.++-|..|+... ... ..+.. . ....|.++...++| .+.+++.++-+.
T Consensus 306 ~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~--~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g-~lWiGt~~~Gl~ 380 (795)
T 4a2l_A 306 SLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIR--NRF-KNIRNIPYKNSLSDNVVSCIVEDKDK-NLWIGTNDGGLN 380 (795)
T ss_dssp SCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGG--GSS-EEECCCTTSSSCSCSSEEEEEECTTS-CEEEEESSSCEE
T ss_pred CCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCc--ccc-eEEcCCCCCCCCCCCeeEEEEECCCC-CEEEEECCCCeE
Confidence 3445679999999998854 467767788888643 221 11211 1 23468899888874 555666667788
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeecc-CCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCce
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGT 248 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~ 248 (350)
.|+...... ..+.... .... +-....|.++...++|+.|..++.+ +-|..||..+++..
T Consensus 381 ~~~~~~~~~-~~~~~~~------------------~~~~~~l~~~~v~~i~~d~~g~~lWigt~~-~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 381 LYNPITQRF-TSYTLQE------------------DESARGIGSNNIKAVYVDEKKSLVYIGTHA-GGLSILHRNSGQVE 440 (795)
T ss_dssp EECTTTCCE-EEECCC------------------------CCSCSCEEEEEEETTTTEEEEEETT-TEEEEEETTTCCEE
T ss_pred EEcCCCCcE-EEEecCC------------------CCcccCCCCccEEEEEEcCCCCEEEEEeCc-CceeEEeCCCCcEE
Confidence 888763221 1110000 0000 0012578899988888746667776 47999999887655
Q ss_pred eeee-----cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc-------CCCCeEEEEEcCCCCEEEEEE
Q 018806 249 PIRR-----GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-------TSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 249 ~~~~-----~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~-------~~~~v~~~~~s~~g~~l~~~~ 314 (350)
.+.. ....|.++...++|++.+.. . +-|.+||.++++...+.. ....|.++...++|+..+.+.
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 4432 23568899988888865544 3 458899998876644321 235789999999998776543
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.0013 Score=59.01 Aligned_cols=159 Identities=11% Similarity=0.069 Sum_probs=96.9
Q ss_pred CeeEEEEee-CCCeEEEEecC-CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEE---
Q 018806 146 DVKVLEWRP-NGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW--- 220 (350)
Q Consensus 146 ~v~~~~~sp-~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--- 220 (350)
....|+|.| +...|+++... +.|++.|+... ....+... -.. .......++|
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~---------------------~~~-~~~~p~~ia~~~~ 196 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNI---------------------NTI-PTNRIRSIAFNKK 196 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECC---------------------TTS-SCSBEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEcc---------------------Ccc-ccCCCcEEEEeec
Confidence 467899998 44556655554 66777777622 21111110 000 1136789999
Q ss_pred ----CCCCCeEEEEEeCCC------eEEEEeCCC-CCce-----eeeecCCCeEEEEEcCCCCEE-EEEecCCeEEEEeC
Q 018806 221 ----GPDGRYLASASYESS------SFTIWDVAQ-GLGT-----PIRRGFGGLSILKWSPTGDYF-FAAKFDGTFYLWET 283 (350)
Q Consensus 221 ----sp~g~~l~~~~~d~g------~i~iwd~~~-~~~~-----~~~~~~~~v~~~~~sp~g~~l-~~~~~d~~v~iwd~ 283 (350)
+++|++|+++...++ .|.+++... +... ...........++++|++..| ++-..++.|+.+|+
T Consensus 197 ~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 197 IEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp BTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred ccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 999997777765521 366776444 2221 122222345578889965555 55556788999999
Q ss_pred C-------CCce------------eccc--cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 284 N-------TWTS------------EPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 284 ~-------~~~~------------~~~~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
+ +++. ..+. ........++|+|+|+.|+++......|+.++...
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 7 5553 0111 22345689999999998888876667888877654
No 277
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.86 E-value=0.0012 Score=62.18 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=53.2
Q ss_pred CeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCCe--EEEEEcCCCCEEEE
Q 018806 235 SSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV--TGATWDPEGRMILL 312 (350)
Q Consensus 235 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v--~~~~~s~~g~~l~~ 312 (350)
|.|..||+.+++...............+...+..+++++.|+.|++||.++++..........+ .-+.+..+|++.++
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA 517 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEE
Confidence 6899999999987765544444444445557788999999999999999999984322111211 23455667775443
Q ss_pred EE
Q 018806 313 AF 314 (350)
Q Consensus 313 ~~ 314 (350)
.+
T Consensus 518 ~~ 519 (668)
T 1kv9_A 518 IM 519 (668)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.81 E-value=0.0012 Score=61.10 Aligned_cols=80 Identities=10% Similarity=-0.007 Sum_probs=52.6
Q ss_pred CeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccCCCC--eEEEEEcCCCCEEEE
Q 018806 235 SSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF--VTGATWDPEGRMILL 312 (350)
Q Consensus 235 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--v~~~~~s~~g~~l~~ 312 (350)
|.|..||..+++..........+....+...+..+++++.|+.|+.||.++++.......... -.-+.+..+|+.++.
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 689999999998766554443333333334566788889999999999999998533222121 123446678876665
Q ss_pred EE
Q 018806 313 AF 314 (350)
Q Consensus 313 ~~ 314 (350)
..
T Consensus 524 ~~ 525 (571)
T 2ad6_A 524 SM 525 (571)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 279
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.80 E-value=0.0024 Score=53.79 Aligned_cols=177 Identities=10% Similarity=0.156 Sum_probs=107.3
Q ss_pred EecCCCEEEEEEC--CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC--------------cEEE
Q 018806 107 WHQHKHIVAFISG--STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG--------------GICI 170 (350)
Q Consensus 107 ~sp~g~~la~~s~--d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--------------~v~i 170 (350)
|+.+|.+|+.... ++.|...+.+ +.....+.. . .+--++++|+.+.++.... .|+.
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~d---g~~~~~l~~---~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNID---GSNIHKLSN---D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETT---SCSCEEEEE---E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCC---CCCCEEccC---C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 3458888888753 4555555543 444444432 1 2345689999998887642 3344
Q ss_pred EecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEE---eCCCeEEEEeCCCCCc
Q 018806 171 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASAS---YESSSFTIWDVAQGLG 247 (350)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~---~d~g~i~iwd~~~~~~ 247 (350)
.++. +..... +. .. ....|++++++|+... .++..|+..++.....
T Consensus 93 i~~d--g~~~~~------------------------l~---~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~ 141 (302)
T 3s25_A 93 IKRN--GHGSTV------------------------LD---PD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK 141 (302)
T ss_dssp EETT--SCCCEE------------------------EE---CS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC
T ss_pred EeCC--CCcceE------------------------ee---cC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe
Confidence 4443 211111 00 01 1236788999999876 2324777778876655
Q ss_pred eeeeecCCCeEEEEEcCCCCEEEEEec-CCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEe
Q 018806 248 TPIRRGFGGLSILKWSPTGDYFFAAKF-DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHF 325 (350)
Q Consensus 248 ~~~~~~~~~v~~~~~sp~g~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~ 325 (350)
..+..+.. ..|+++|+.|+..+. ...|++.++..+....+.. +... ..++|++++|+... .+...++...+
T Consensus 142 ~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~l 214 (302)
T 3s25_A 142 KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNI 214 (302)
T ss_dssp EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEEC
Confidence 55554433 457889999886665 5689999998877655543 2222 34669999999886 33357778777
Q ss_pred CCCC
Q 018806 326 ASKP 329 (350)
Q Consensus 326 ~~~~ 329 (350)
....
T Consensus 215 dG~~ 218 (302)
T 3s25_A 215 NNPN 218 (302)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 6544
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.76 E-value=0.0084 Score=51.06 Aligned_cols=182 Identities=12% Similarity=0.149 Sum_probs=101.6
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCc
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 180 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~ 180 (350)
.+..+.+.++++.++.+ .++.+ |.-. ..++.-..........+..+.+.+++ .+++++.++.+..-+-. .+.
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v--~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~-gG~-- 194 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAI--YRTK-DSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEP-GQT-- 194 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCE--EEES-STTSSEEEEECSCCCCEEEEEECTTS-CEEEEETTSSEEEEECT-TCS--
T ss_pred CeEEEEEECCCCEEEEe-CCccE--EEEc-CCCCCCEEeecCCCcceEEEEEcCCC-cEEEEECCCcEEEEeCC-CCC--
Confidence 36778887777766654 45543 3322 12433333434556678999999984 56666666655443211 111
Q ss_pred eeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc-eeeee----cCC
Q 018806 181 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG-TPIRR----GFG 255 (350)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~-~~~~~----~~~ 255 (350)
.|..... .. ...+..+++.++++.++ ++.+ |.+++.+...++. ..+.. ...
T Consensus 195 -------------------tW~~~~~--~~-~~~~~~~~~~~~g~~~~-~~~~-G~~~~s~~D~G~tW~~~~~~~~~~~~ 250 (327)
T 2xbg_A 195 -------------------AWEPHNR--TT-SRRLHNMGFTPDGRLWM-IVNG-GKIAFSDPDNSENWGELLSPLRRNSV 250 (327)
T ss_dssp -------------------SCEEEEC--CS-SSCEEEEEECTTSCEEE-EETT-TEEEEEETTEEEEECCCBCTTSSCCS
T ss_pred -------------------ceeECCC--CC-CCccceeEECCCCCEEE-EeCC-ceEEEecCCCCCeeEeccCCcccCCc
Confidence 2222211 11 25788899999887654 4455 6887765332321 11111 123
Q ss_pred CeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce-eccc---cCCCCeEEEEEcCCCCEEEEEECC
Q 018806 256 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWS---STSGFVTGATWDPEGRMILLAFAG 316 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~-~~~~---~~~~~v~~~~~s~~g~~l~~~~~~ 316 (350)
.+..+.+.+++..++++. ++.| ++..+.++. ..+. .....+.++.|.++++.++++.++
T Consensus 251 ~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G 313 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKG 313 (327)
T ss_dssp CEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTT
T ss_pred ceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCc
Confidence 588899998887666654 6766 344555544 2222 123567889998766655554443
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.75 E-value=0.0079 Score=53.45 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=89.6
Q ss_pred CeeEEEEecC--CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCC----c-EEEEec
Q 018806 101 DLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG----G-ICIWAP 173 (350)
Q Consensus 101 ~V~~v~~sp~--g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~-v~iwd~ 173 (350)
....++|+|+ ...|..+...+.|+.++... +.. ..+. ........++|+++|+ ++++...+ . +...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~--g~v-~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN--QYV-DIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT--TEE-EEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC--CEE-EEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4678999995 44455555447888888742 332 3332 3345689999999987 55554421 1 222222
Q ss_pred CCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc-eeeee
Q 018806 174 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG-TPIRR 252 (350)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~-~~~~~ 252 (350)
. ..... ...+. . ......++++|+...|+.+...++.|+.+|..++.. ..+..
T Consensus 215 ~-~~~~~-----------------------~~~~~-~-~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~ 268 (433)
T 4hw6_A 215 A-SGFTE-----------------------RLSLC-N-ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM 268 (433)
T ss_dssp G-GTTCC-----------------------EEEEE-E-CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE
T ss_pred C-CCeec-----------------------ccccc-c-cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec
Confidence 1 11000 00011 1 135678999994444555544446999999987765 23322
Q ss_pred c--CCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCC
Q 018806 253 G--FGGLSILKWSPTGDYFFAA-KFDGTFYLWETN 284 (350)
Q Consensus 253 ~--~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~ 284 (350)
. ......++|+|+|++|+.+ ...+.|+.++++
T Consensus 269 ~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 269 MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 1 2234579999999966555 456789998865
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.73 E-value=0.013 Score=54.71 Aligned_cols=183 Identities=10% Similarity=0.030 Sum_probs=117.4
Q ss_pred ECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccceecCC
Q 018806 118 SGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRG 196 (350)
Q Consensus 118 s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 196 (350)
.....|+..+++..... .......-.....++|++.++.++.+.. .+.|..+++........+
T Consensus 15 ~~~~~I~~i~~~~~~~~--~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v-------------- 78 (619)
T 3s94_A 15 ANRRDLRLVDATNGKEN--ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV-------------- 78 (619)
T ss_dssp ECSSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE--------------
T ss_pred eccccEEEEeCCCCcce--EEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE--------------
Confidence 35677888888532111 1121223456889999998777777665 477888887622111111
Q ss_pred CCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-ecCCCeEEEEEcCCCCEEEEEec-
Q 018806 197 PGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-RGFGGLSILKWSPTGDYFFAAKF- 274 (350)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~g~~l~~~~~- 274 (350)
+... -.....+++.+.++.|+.+....+.|.+.++.......+. ..-.....+++.|.+.+|+....
T Consensus 79 ----------~~~~-~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g 147 (619)
T 3s94_A 79 ----------VVSG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG 147 (619)
T ss_dssp ----------ECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS
T ss_pred ----------EeCC-CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC
Confidence 1111 1467899999987777777665579999999876555444 33456788999997666655543
Q ss_pred -CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 275 -DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 275 -d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
.+.|...+++......+. ........++++++++.|+.+......++.+++..
T Consensus 148 ~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 148 EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp SSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 467888888765444333 23456789999999999998886667788877764
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.73 E-value=0.0005 Score=65.15 Aligned_cols=197 Identities=5% Similarity=-0.078 Sum_probs=112.8
Q ss_pred CeeEEEEecCCCEEEEEE-CCCeEEEEEccCCC-CCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCC
Q 018806 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSE-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 177 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~ 177 (350)
.+.+++|++.+..|+.+. ..+.|+.++++... +.....+..........|++.+.++.|+.+.. .+.|.++++.. .
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg-~ 485 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-V 485 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS-C
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC-C
Confidence 567899999877777654 45788888875310 01111111111223566788766566655544 58888888762 2
Q ss_pred CCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCC-CeEEEEeCCCCCceeeee-cCC
Q 018806 178 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYES-SSFTIWDVAQGLGTPIRR-GFG 255 (350)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~-g~i~iwd~~~~~~~~~~~-~~~ 255 (350)
....+ +... ......++++|.+.+|+.+.... +.|..+++.......+.. .-.
T Consensus 486 ~~~~l------------------------~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 486 KRKTL------------------------FREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp CEEEE------------------------CCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred ceEEE------------------------EeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 11111 1111 13567889999777776654332 478888876544333322 234
Q ss_pred CeEEEEEcCCCCEEEEE-ecCCeEEEEeCCCCceecccc---CCCCeEEEEEcCCCCEEEEEECCCeEEEEEEe
Q 018806 256 GLSILKWSPTGDYFFAA-KFDGTFYLWETNTWTSEPWSS---TSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~ 325 (350)
....++|+|++..|+.+ ...+.|.++++.......+.. .......|++.. ..|+.+..+...|..++.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANR 612 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEET
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEc
Confidence 56789999987666555 456789999997654433332 112334555543 466666544456666654
No 284
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.73 E-value=0.0011 Score=56.30 Aligned_cols=174 Identities=11% Similarity=0.097 Sum_probs=101.8
Q ss_pred CCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeeccccccc
Q 018806 111 KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFL 190 (350)
Q Consensus 111 g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 190 (350)
+..|..++.++.+..+|.. ++...... .....+.++...++ ..+++++.++.+..+|.. +......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~---g~~~~~~~-~~~~~~~~~~~~~~-g~l~vgt~~~~l~~~d~~-g~~~~~~-------- 172 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD---GTEKWRFK-TKKAIYATPIVSED-GTIYVGSNDNYLYAINPD-GTEKWRF-------- 172 (330)
T ss_dssp TTEEEEECTTSEEEEECTT---SCEEEEEE-CSSCCCSCCEECTT-SCEEEECTTSEEEEECTT-SCEEEEE--------
T ss_pred CCEEEEEecCCEEEEEcCC---CCEEEEEc-CCCceeeeeEEcCC-CEEEEEcCCCEEEEECCC-CCEeEEE--------
Confidence 4456677788888888874 33333332 23445666777666 456666667889999876 3221111
Q ss_pred ceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEEEEcCCCCEE
Q 018806 191 GALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSILKWSPTGDYF 269 (350)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l 269 (350)
... ...+.++...+++..++.. . .|..+| .+++...... ....+.++...++|. |
T Consensus 173 -----------------~~~-~~~~~~~~~d~~g~l~v~t--~--~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l 228 (330)
T 3hxj_A 173 -----------------KTN-DAITSAASIGKDGTIYFGS--D--KVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-I 228 (330)
T ss_dssp -----------------ECS-SCCCSCCEECTTCCEEEES--S--SEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-E
T ss_pred -----------------ecC-CCceeeeEEcCCCEEEEEe--C--EEEEEC-CCCcEEEEEccCCcceeceEECCCCe-E
Confidence 111 1356777787787755544 3 789999 6665443332 335577888888875 5
Q ss_pred EEEecCCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 270 FAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 270 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
..++.++.|..+|...............+..+.+.++|...+ ++.+ ..++.++
T Consensus 229 ~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~-ggl~~~d 281 (330)
T 3hxj_A 229 YVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYF-GSYD-GHLYAIN 281 (330)
T ss_dssp EEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEE-ECTT-CEEEEEC
T ss_pred EEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEE-ecCC-CCEEEEC
Confidence 556667888888753333333333333345566676776544 4432 2344444
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.73 E-value=0.00034 Score=66.32 Aligned_cols=180 Identities=11% Similarity=0.011 Sum_probs=109.6
Q ss_pred CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCC---CCCceeecccccccceec
Q 018806 119 GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYP---GNAASVRSGAASFLGALS 194 (350)
Q Consensus 119 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~ 194 (350)
..+.|+..+++. .. ...+ ......+..++|.+.++.|+.+.. .+.|+.+++... .....+
T Consensus 384 ~~~~I~~id~~~--~~-~~~~-~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~------------ 447 (699)
T 1n7d_A 384 NRHEVRKMTLDR--SE-YTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------------ 447 (699)
T ss_dssp CTTC-CEECTTS--CC-EECC-SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB------------
T ss_pred CccceEEEeCCC--Cc-ceee-eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE------------
Confidence 445677777643 22 2222 123346778999987677776655 488888887631 110000
Q ss_pred CCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec-CCCeEEEEEcCCCCEEEEEe
Q 018806 195 RGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG-FGGLSILKWSPTGDYFFAAK 273 (350)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~ 273 (350)
+... ......+++.+.+..|+.+....+.|.++++.......+... ......++++|.+.+|+.+.
T Consensus 448 ------------i~~~-~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 448 ------------ISRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp ------------CCSC-C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECC
T ss_pred ------------EeCC-CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcc
Confidence 1100 124567888876666666544436899999886654444332 34567889999766665544
Q ss_pred c--CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 274 F--DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 274 ~--d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
. .+.|+++++.......+. ........|+|+|++..|+++......|..+++..
T Consensus 515 ~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred cCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3 268888887654433332 22345678999999988988886666788877754
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.015 Score=48.94 Aligned_cols=196 Identities=9% Similarity=0.017 Sum_probs=113.5
Q ss_pred eeEEEEecCCCEEEEEE-CCCeEEEEEccCCCCCceeEecCCC-----C--CCeeEEEE---eeCCCeEEEEec------
Q 018806 102 LQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSEGKDACILTSDS-----Q--RDVKVLEW---RPNGGRSLSVGC------ 164 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s-~d~~i~iw~~~~~~~~~~~~~~~~~-----~--~~v~~~~~---sp~~~~l~~~~~------ 164 (350)
-.++.|++....+..++ ..++|..|+... +...... ... . ..+..+.| .|+ ++|+++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~--~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKT--QSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTT--CCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCC--CeEEEEe-cCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 35788998666666666 689999999852 2222222 221 1 13579999 688 45554333
Q ss_pred --------CCcEEEEecC---CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC
Q 018806 165 --------KGGICIWAPS---YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE 233 (350)
Q Consensus 165 --------d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 233 (350)
+..+..+|+. +++....+.-..... -.+...+........++..++|+..++.+..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~-------------~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQD-------------EFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHH-------------HHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccc-------------cccccccccccCCceeEECCCCCEEEeCCCC
Confidence 4668888887 333322211000000 0000001111357899999999988887776
Q ss_pred -CCeEEEEeCCCCCceeeeec------CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce--eccc--c---CCCCeE
Q 018806 234 -SSSFTIWDVAQGLGTPIRRG------FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS--EPWS--S---TSGFVT 299 (350)
Q Consensus 234 -~g~i~iwd~~~~~~~~~~~~------~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~--~~~~--~---~~~~v~ 299 (350)
. .|...+............ ......++++|+|+.|++....+.|..+|++.... .... + ......
T Consensus 158 ~~-~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 158 MP-AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp SC-EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred CC-eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcc
Confidence 5 777777765433322211 12467899999999998887799999999885333 2222 1 112234
Q ss_pred EE-EEcCCCCEEEEEEC
Q 018806 300 GA-TWDPEGRMILLAFA 315 (350)
Q Consensus 300 ~~-~~s~~g~~l~~~~~ 315 (350)
.+ .--.+|+.|+++..
T Consensus 237 gilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGAR 253 (334)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred cccccccCCEEEEEEcC
Confidence 43 33457888666653
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.69 E-value=0.0071 Score=52.14 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=38.6
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCc-------eeccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT-------SEPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~-------~~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
.....++| .+|..+++.-..+.|...+++... ...+......+..+++.|||.+.++..
T Consensus 268 ~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 268 FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 34567777 467666665566778888776443 122323346789999999997766554
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.0031 Score=56.62 Aligned_cols=161 Identities=12% Similarity=0.093 Sum_probs=92.7
Q ss_pred CeeEEEEec-CCCEEEEEEC-CCeEEEEEccCCCCCceeEecCC--CCCCeeEEEE-------eeCCCeEEEEecCC-c-
Q 018806 101 DLQGVSWHQ-HKHIVAFISG-STQVIVRDYEDSEGKDACILTSD--SQRDVKVLEW-------RPNGGRSLSVGCKG-G- 167 (350)
Q Consensus 101 ~V~~v~~sp-~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~-------sp~~~~l~~~~~d~-~- 167 (350)
....|+|+| +...|..+.. .+.|++.|+. ++........+ .-.....++| +++|..++++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~--~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLK--NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETT--TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECC--CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 467899999 3554555443 3556666764 23322222211 1235789999 99988677766543 2
Q ss_pred -----EEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 168 -----ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 168 -----v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
|.+.+....+.... .. ....+..+ .....++++|++..|+.+...+|.|..+|+
T Consensus 218 ~~~~~V~~i~r~~~G~~~~--~~--------------~~~~v~~~-----~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDD--RS--------------DIQLIAAY-----KQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp GGEEEEEEEECCTTSCCST--TS--------------CEEEEEEE-----SCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred ccCceEEEEecCCCCceee--cc--------------cceeeccC-----CCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 44554221111100 00 00011111 245678999977777777666579999998
Q ss_pred C-------CCCc------------eeeee--cCCCeEEEEEcCCCCEEEEE-ecCCeEEEEeCC
Q 018806 243 A-------QGLG------------TPIRR--GFGGLSILKWSPTGDYFFAA-KFDGTFYLWETN 284 (350)
Q Consensus 243 ~-------~~~~------------~~~~~--~~~~v~~~~~sp~g~~l~~~-~~d~~v~iwd~~ 284 (350)
. ++.. ..+.. .......++|+|+|++|+.+ ...+.|+.++..
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 7 5543 12221 23456799999999976555 456788886653
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.65 E-value=0.049 Score=52.45 Aligned_cols=189 Identities=12% Similarity=0.128 Sum_probs=120.5
Q ss_pred CCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCC-------CCCCeeEEEEeeCCCeEEEEecCCcEE
Q 018806 97 LPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSD-------SQRDVKVLEWRPNGGRSLSVGCKGGIC 169 (350)
Q Consensus 97 ~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~d~~v~ 169 (350)
+....|.++...++|.+.+ |+.+| +.+|+... +. ...+... ....|.++...++| .+..++.++.|.
T Consensus 260 l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~--~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt~~~Gl~ 333 (795)
T 4a2l_A 260 ISSNYIRSLAMDSQNRLWI-GTFND-LNIYHEGT--DS-FASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGTYFGGLN 333 (795)
T ss_dssp CSCSBEEEEEECTTSCEEE-EESSC-EEEEETTT--TE-EEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEESSSCEE
T ss_pred cCCCeEEEEEEcCCCCEEE-EeCCh-hheEcCCC--Ce-EEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEECCCCeE
Confidence 3456799999999988554 45554 78888642 22 2222111 23569999988885 555666667788
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP 249 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~ 249 (350)
.|+...... ..+.... .-.+-....|.++...++|...+ ++.+ |-|..||..++....
T Consensus 334 ~~~~~~~~~-~~~~~~~-------------------~~~~l~~~~V~~i~~d~~g~lWi-Gt~~-~Gl~~~~~~~~~~~~ 391 (795)
T 4a2l_A 334 YYHPIRNRF-KNIRNIP-------------------YKNSLSDNVVSCIVEDKDKNLWI-GTND-GGLNLYNPITQRFTS 391 (795)
T ss_dssp EECGGGGSS-EEECCCT-------------------TSSSCSCSSEEEEEECTTSCEEE-EESS-SCEEEECTTTCCEEE
T ss_pred EeCCCcccc-eEEcCCC-------------------CCCCCCCCeeEEEEECCCCCEEE-EECC-CCeEEEcCCCCcEEE
Confidence 888652211 1110000 00010124689999988886554 5555 469999988776544
Q ss_pred eee---------cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc-----CCCCeEEEEEcCCCCEEEEE
Q 018806 250 IRR---------GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-----TSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 250 ~~~---------~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~~~~v~~~~~s~~g~~l~~~ 313 (350)
... ....|.+++..++|+.|..|+.++-|..||.++++...+.. ....|.++...++|++.+.+
T Consensus 392 ~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 392 YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 321 13568899988899856667777789999999887654432 24578999999999876644
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.62 E-value=0.0034 Score=59.08 Aligned_cols=210 Identities=13% Similarity=0.015 Sum_probs=110.4
Q ss_pred eEEEEecCCCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-C-----CcEEEEecCC
Q 018806 103 QGVSWHQHKHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-K-----GGICIWAPSY 175 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d-----~~v~iwd~~~ 175 (350)
.++++.++++++++|+. +..+.+||....+-...... .....-.+++..++|+.++.+|. + ..+.+||...
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~--~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM--QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC--SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC--CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 34677889999999874 56899999864322211111 11222234556668777777773 3 5688999874
Q ss_pred CCCCcee--------eccccc----ccce--ecCCCC---------CceEEeee--------ccCCC--------CCcee
Q 018806 176 PGNAASV--------RSGAAS----FLGA--LSRGPG---------TRWTLVDF--------LRSQN--------GEQIT 216 (350)
Q Consensus 176 ~~~~~~~--------~~~~~~----~~~~--~~~~~~---------~~~~~~~~--------~~~~~--------~~~v~ 216 (350)
.. -..+ ...... .... +..+.+ ..+..++. ...+. ...-.
T Consensus 324 ~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 324 KT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred Cc-ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 32 1111 000000 0000 000000 11111110 00000 01123
Q ss_pred eEEEC-CCCCeEEEEEeCC-------C---eEEEEeCCCCCceeee--e-cCC-CeEEEEEcCCCCEEEEEecC------
Q 018806 217 ALSWG-PDGRYLASASYES-------S---SFTIWDVAQGLGTPIR--R-GFG-GLSILKWSPTGDYFFAAKFD------ 275 (350)
Q Consensus 217 ~~~~s-p~g~~l~~~~~d~-------g---~i~iwd~~~~~~~~~~--~-~~~-~v~~~~~sp~g~~l~~~~~d------ 275 (350)
++.|. .+++.+++++.+. . .|.+||..+.....+. . ... .-.+++..|+|+.++.|+.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 34443 3677777777431 1 5778888776654443 1 112 23355677899999988754
Q ss_pred -----CeEEEEeCCCCceeccc---cCCCCeEEEEEcCCCCEEEEEEC
Q 018806 276 -----GTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFA 315 (350)
Q Consensus 276 -----~~v~iwd~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~~~~ 315 (350)
..+.+||..+.+-..+. ..........+.|+|+.+++|+.
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 46899999877653322 11222344567799999998873
No 291
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.60 E-value=0.0015 Score=56.72 Aligned_cols=142 Identities=8% Similarity=-0.048 Sum_probs=83.9
Q ss_pred CEEEEEECCCeEEEEEccCCCCCceeEecCCCCCC---------e-eEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 112 HIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRD---------V-KVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 112 ~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~---------v-~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
..++.+..++.+..+|..+ ++..-......... + ..... .+..+++++.++.+..+|...++..
T Consensus 189 ~~v~~g~~~g~l~~~d~~t--G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~-- 262 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQ--GQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIM-- 262 (376)
T ss_dssp TEEEECCTTTEEEEEETTT--CCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEE--
T ss_pred CEEEEEcCCCEEEEEECCC--CcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEE--
Confidence 4566677788888888753 54433332111000 1 11111 2366777777888999988744321
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-c-CCCeEE
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-G-FGGLSI 259 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~-~~~v~~ 259 (350)
+..- . .....+.. ++..++.++.+ |.+..+|..+++...... . ...+..
T Consensus 263 ----------------------w~~~---~-~~~~~~~~--~~~~l~~~~~~-g~l~~~d~~tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 263 ----------------------WKRE---L-GSVNDFIV--DGNRIYLVDQN-DRVMALTIDGGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp ----------------------EEEC---C-CCEEEEEE--ETTEEEEEETT-CCEEEEETTTCCEEEEECTTTTSCCCC
T ss_pred ----------------------eecc---C-CCCCCceE--ECCEEEEEcCC-CeEEEEECCCCcEEEeecccCCCcccC
Confidence 1110 0 12233333 35677777777 699999999998765443 1 122222
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCceec
Q 018806 260 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEP 290 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~ 290 (350)
... .+..|++++.+|.|+++|.++++...
T Consensus 314 ~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 314 PVL--YNGNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp CEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CEE--ECCEEEEEeCCCeEEEEECCCCcEEE
Confidence 332 35678888889999999999998743
No 292
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.59 E-value=0.0056 Score=53.12 Aligned_cols=146 Identities=10% Similarity=-0.081 Sum_probs=85.9
Q ss_pred CCCEEEEEECCCeEEEEEccCCCCCceeEecCCC--------CCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 110 HKHIVAFISGSTQVIVRDYEDSEGKDACILTSDS--------QRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 110 ~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~--------~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
++..|++++.++.+..+|..+ ++..-...... ...+... ...++..+++++.++.+..+|...++....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADD--GKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTT--CCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccC--CceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 356677778888898998854 55433332211 1223222 223447788888889999999875443211
Q ss_pred eecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCe----
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGL---- 257 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v---- 257 (350)
... .. ......... +..++.++.+ |.|..+|..+++..........+
T Consensus 129 ~~~-----------------------~~---~~~~~p~~~--~~~v~v~~~~-g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 129 TKV-----------------------AG---EALSRPVVS--DGLVLIHTSN-GQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp EEC-----------------------SS---CCCSCCEEE--TTEEEEECTT-SEEEEEETTTCCEEEEEECCC-----C
T ss_pred EeC-----------------------CC---ceEcCCEEE--CCEEEEEcCC-CeEEEEECCCCcEEEEEeCCCCceeec
Confidence 111 10 011111221 3467777777 69999999999876554433222
Q ss_pred --EEEEEcCCCCEEEEEecCCeEEEEeCCCCcee
Q 018806 258 --SILKWSPTGDYFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 258 --~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
...... +..++++..++.|..+|.++++..
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEE
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEE
Confidence 122222 346777888999999999998874
No 293
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.59 E-value=0.0041 Score=58.86 Aligned_cols=171 Identities=13% Similarity=0.052 Sum_probs=95.1
Q ss_pred CCCEEEEEECCCeEEEEEccCCCCCceeEecCC-CC---CCeeE-EEEeeCCCeEEEEec------CCcEEEEecCCCCC
Q 018806 110 HKHIVAFISGSTQVIVRDYEDSEGKDACILTSD-SQ---RDVKV-LEWRPNGGRSLSVGC------KGGICIWAPSYPGN 178 (350)
Q Consensus 110 ~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~-~~---~~v~~-~~~sp~~~~l~~~~~------d~~v~iwd~~~~~~ 178 (350)
++..|++++.|+.+..+|..+ ++..-..... +. ..+.+ ... .+ ..++++.. ++.|+.||..+++.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~T--G~~~W~~~~~~~~~~~~~~~~sP~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKT--GQRAWSVDTRADHKRSYTITGAPRV-VN-GKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTT--CCEEEEEECCSCTTSCCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ECCEEEEEccCCEEEEEECCC--CCEeeeecCcCCCCCCccccCCcEE-EC-CEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 356788888899999999854 6554433222 11 11111 111 24 45555432 58899999986665
Q ss_pred Cceeecccccccceec---------CCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC--------------
Q 018806 179 AASVRSGAASFLGALS---------RGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS-------------- 235 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g-------------- 235 (350)
.-.+......+...+. .-....|. ...+. ......++++|++..++.++.+ |
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~---~~~~g-~~~w~~~~~d~~~~~vy~~~~~-g~~w~~~~~~~~~gd 270 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV---EQGGG-GTAWDSFAYDPELNLLYIGVGN-GSLWDPKWRSQAKGD 270 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH---HHCEE-CCCCSCEEEETTTTEEEEECCC-EESSCHHHHHTTCSC
T ss_pred EEEecccCCCcccccccccccccccccCCceee---ecCCC-CccccceeEcCCCCEEEEeCCC-CCccccCCCCCCCCC
Confidence 4433321100000000 00000000 00011 1223467888988888887766 4
Q ss_pred -----eEEEEeCCCCCceeeee---cC-------CCeEEEEEcCCCC---EEEEEecCCeEEEEeCCCCcee
Q 018806 236 -----SFTIWDVAQGLGTPIRR---GF-------GGLSILKWSPTGD---YFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 236 -----~i~iwd~~~~~~~~~~~---~~-------~~v~~~~~sp~g~---~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
.|..+|.++|+...... +. ..+.......+|+ .++.++.+|.++++|.++|+..
T Consensus 271 ~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 271 NLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 39999999998775433 21 1122222333665 6888899999999999999874
No 294
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.56 E-value=0.0074 Score=49.20 Aligned_cols=117 Identities=10% Similarity=0.127 Sum_probs=83.1
Q ss_pred eccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee--ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeC
Q 018806 206 FLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWET 283 (350)
Q Consensus 206 ~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~ 283 (350)
.+.+-. ..+..++|+|++..|++.....+.|...|.. ++..... ........+++.+++.++++.-.++.+.++++
T Consensus 21 ~l~g~~-~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGIT-NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCC-SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcc-cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 455554 5799999999888777766555799999998 6544433 23356888999999987676656788999987
Q ss_pred CCCce------ecc----ccCCCCeEEEEEcCCCCEEEEEECCC-eEEEEEE
Q 018806 284 NTWTS------EPW----SSTSGFVTGATWDPEGRMILLAFAGS-LTLGSIH 324 (350)
Q Consensus 284 ~~~~~------~~~----~~~~~~v~~~~~s~~g~~l~~~~~~~-~~~~~~~ 324 (350)
..... ..+ .........++|+|+++.|+++.... ..++.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 65442 111 12234568999999998888887443 5788887
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.032 Score=48.02 Aligned_cols=59 Identities=10% Similarity=0.029 Sum_probs=39.8
Q ss_pred CCeEEEEEc-------CCCCEEEEEecCCeEEEEeCCCC-ce---eccc-cCCCCeEEEEEcCCCCEEEEE
Q 018806 255 GGLSILKWS-------PTGDYFFAAKFDGTFYLWETNTW-TS---EPWS-STSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 255 ~~v~~~~~s-------p~g~~l~~~~~d~~v~iwd~~~~-~~---~~~~-~~~~~v~~~~~s~~g~~l~~~ 313 (350)
.....++|. .+|.++++.-..+.|...+++.. +. ..+. .....+..+++.|||.+.++.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 456778883 56776666666778888888753 22 2222 224578999999999766554
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.49 E-value=0.0096 Score=55.16 Aligned_cols=78 Identities=12% Similarity=0.012 Sum_probs=49.8
Q ss_pred CeEEEEeCCCCCceeeeecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc--CCCCeEEEEEcCCCCEEEE
Q 018806 235 SSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS--TSGFVTGATWDPEGRMILL 312 (350)
Q Consensus 235 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~ 312 (350)
|.|..||+.+++.........+...-.+...+..++.++.|+.|+.||.++|+..-... ......-+.|..+|++.++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence 68999999999876554433222221223356678889999999999999999843221 1112233567778875443
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.06 Score=51.71 Aligned_cols=187 Identities=11% Similarity=0.054 Sum_probs=115.9
Q ss_pred CCCccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec--------C-CCCCCeeEEEEeeCCCeEEEEecCC
Q 018806 96 LLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT--------S-DSQRDVKVLEWRPNGGRSLSVGCKG 166 (350)
Q Consensus 96 ~~~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~--------~-~~~~~v~~~~~sp~~~~l~~~~~d~ 166 (350)
.+....|.++...++|.+- .|+.++-|..++... ... ..+. . -....|.++...++| .+.+++.++
T Consensus 309 ~l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~--~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~ 383 (781)
T 3v9f_A 309 SLSNASARYIFQDSFNNIW-IGTWGGGINFISNAP--PTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGG 383 (781)
T ss_dssp SBSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSC--CSC-EEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSS
T ss_pred CCCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCC--Ccc-eeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCC
Confidence 3445679999999988744 466666688888643 221 1111 0 123568888887774 555556566
Q ss_pred cEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCC
Q 018806 167 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGL 246 (350)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~ 246 (350)
.+..|+...... ..+.. -.......|.++...++|...+ ++.+ +-+..+|..+++
T Consensus 384 Gl~~~~~~~~~~-~~~~~----------------------~~~~~~~~v~~i~~d~~g~lWi-gt~~-~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 384 GINVFENGKRVA-IYNKE----------------------NRELLSNSVLCSLKDSEGNLWF-GTYL-GNISYYNTRLKK 438 (781)
T ss_dssp CEEEEETTEEEE-ECC---------------------------CCCSBEEEEEECTTSCEEE-EETT-EEEEEECSSSCE
T ss_pred cEEEEECCCCeE-EEccC----------------------CCCCCCcceEEEEECCCCCEEE-Eecc-CCEEEEcCCCCc
Confidence 688888652110 00000 0001125788998888876554 5555 478899988775
Q ss_pred ceeeee---cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccccC------CCCeEEEEEcCCCCEEEEEE
Q 018806 247 GTPIRR---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSST------SGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 247 ~~~~~~---~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~~------~~~v~~~~~s~~g~~l~~~~ 314 (350)
...+.. ....|.++...++|.+.+ |+. +-|..||..+++...+... ...|.++...++|++.+.+.
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 544332 235688898888887554 444 5699999888765433211 35789999999998776443
No 298
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.38 E-value=0.042 Score=47.92 Aligned_cols=109 Identities=10% Similarity=0.103 Sum_probs=76.4
Q ss_pred ceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc-----------e--eeee------cCCCeEEEEEcCC---CCEEEE
Q 018806 214 QITALSWGPDGRYLASASYESSSFTIWDVAQGLG-----------T--PIRR------GFGGLSILKWSPT---GDYFFA 271 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~-----------~--~~~~------~~~~v~~~~~sp~---g~~l~~ 271 (350)
.+..+..+|+|++||..+.. +|.|..+..+.. . ...- ...+|..+.|+|- +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~--~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN--EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS--EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEecCC--eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 67889999999999998765 899998874321 0 1111 1356999999995 567999
Q ss_pred EecCCeEEEEeCCCCceec--c---------ccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEE
Q 018806 272 AKFDGTFYLWETNTWTSEP--W---------SSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIH 324 (350)
Q Consensus 272 ~~~d~~v~iwd~~~~~~~~--~---------~~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~ 324 (350)
-..|+.|++||+......+ + ......|.+++|..+|-.|++.. ...+.+|.+.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 9999999999998632211 1 11235788999999887777754 3334566553
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.31 E-value=0.062 Score=45.60 Aligned_cols=183 Identities=14% Similarity=0.218 Sum_probs=97.2
Q ss_pred cCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecC---CCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCC
Q 018806 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTS---DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 176 (350)
Q Consensus 100 ~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~ 176 (350)
..+.+|.|.+++..+++ +..+.| +...+ .++.-..... .....+.++.|.+ +.+++++..+.|.. ....
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i-~~s~D--gG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~--S~Dg 107 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL-METRD--GGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH--TTDG 107 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE-EEESS--TTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEETTEEEE--ESST
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE-EEeCC--CCCCCeECCCCCCCCCccEEEEEecC--CeEEEEECCCeEEE--ECCC
Confidence 36889999887777774 566754 22222 2322222211 1244688999975 45666666675443 2222
Q ss_pred CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCc-eeee-ecC
Q 018806 177 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLG-TPIR-RGF 254 (350)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~-~~~~-~~~ 254 (350)
+. .|......... .+.+..+.+.++++.++.+ .+ |.|.. ..+.++. ..+. ...
T Consensus 108 G~---------------------tW~~~~~~~~~-~~~~~~i~~~~~~~~~~~~-~~-g~v~~-S~DgG~tW~~~~~~~~ 162 (327)
T 2xbg_A 108 GQ---------------------SWSQIPLDPKL-PGSPRLIKALGNGSAEMIT-NV-GAIYR-TKDSGKNWQALVQEAI 162 (327)
T ss_dssp TS---------------------SCEECCCCTTC-SSCEEEEEEEETTEEEEEE-TT-CCEEE-ESSTTSSEEEEECSCC
T ss_pred CC---------------------CceECccccCC-CCCeEEEEEECCCCEEEEe-CC-ccEEE-EcCCCCCCEEeecCCC
Confidence 22 12211111111 1346677777766655544 44 44432 2223322 2222 234
Q ss_pred CCeEEEEEcCCCCEEEEEecCCeEEEEeC--CCCceeccccCCCCeEEEEEcCCCCEEEEEECC
Q 018806 255 GGLSILKWSPTGDYFFAAKFDGTFYLWET--NTWTSEPWSSTSGFVTGATWDPEGRMILLAFAG 316 (350)
Q Consensus 255 ~~v~~~~~sp~g~~l~~~~~d~~v~iwd~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~ 316 (350)
..+..+.+.+++++++++...+.++-.|- .+.+... ......+..++++++++.++++.++
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G 225 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGG 225 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTT
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEeCCc
Confidence 56889999999988876654443333442 2222221 2334578899999999877665443
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.30 E-value=0.068 Score=45.94 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=45.5
Q ss_pred CeEEEEEcC-------CCCEEEEEecCCeEEEEeCCCCcee---ccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 256 GLSILKWSP-------TGDYFFAAKFDGTFYLWETNTWTSE---PWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 256 ~v~~~~~sp-------~g~~l~~~~~d~~v~iwd~~~~~~~---~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
....+.|.. +|+++++.-..+.|...+++.++.. .+. .....+..+++.|||.+.++.......|+.+.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEe
Confidence 466677753 4666666666778888888765431 222 23457899999999996654444556777664
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.067 Score=51.37 Aligned_cols=183 Identities=9% Similarity=0.033 Sum_probs=113.0
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec---CCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecC
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT---SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~ 174 (350)
....|.++...++|++. .|+.++-+..|+... +.. ..+. ......|.++...++| .+.++..++.+..++..
T Consensus 361 ~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~--~~~-~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~ 435 (781)
T 3v9f_A 361 SNKVVSSVCDDGQGKLW-IGTDGGGINVFENGK--RVA-IYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNTR 435 (781)
T ss_dssp SSSCEEEEEECTTSCEE-EEEBSSCEEEEETTE--EEE-ECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEECSS
T ss_pred CCcceEEEEEcCCCCEE-EEeCCCcEEEEECCC--CeE-EEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEEcCC
Confidence 34579999998888754 456556688888642 211 1111 1134568888887774 55556666678888765
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec-
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG- 253 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~- 253 (350)
... ...+. ........|.++...++|+..+. +.. -+..||..+++.......
T Consensus 436 ~~~-~~~~~-----------------------~~~~~~~~v~~i~~d~~g~lwig-t~~--Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 436 LKK-FQIIE-----------------------LEKNELLDVRVFYEDKNKKIWIG-THA--GVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp SCE-EEECC-----------------------STTTCCCCEEEEEECTTSEEEEE-ETT--EEEEEESSSSSCCEEECTT
T ss_pred CCc-EEEec-----------------------cCCCCCCeEEEEEECCCCCEEEE-ECC--ceEEEeCCCCeEEecccCc
Confidence 221 10000 00111257889988888875554 443 688999887765444321
Q ss_pred -----CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc----CCCCeEEEEEcCCCCEEEEE
Q 018806 254 -----FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS----TSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 254 -----~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~ 313 (350)
...+.++...++|++.+. +.++-|..||.++++...+.. ....|.++...++|+..+.+
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred ccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 256889999999876554 443448889988776544321 23568899999999876644
No 302
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.28 E-value=0.021 Score=50.98 Aligned_cols=60 Identities=13% Similarity=0.230 Sum_probs=36.3
Q ss_pred CeeEEEEecCCCEEEEEECC-CeEEEEEccCCCCCcee--EecC-----CCCCCeeEEEEeeC---CCeEEEEe
Q 018806 101 DLQGVSWHQHKHIVAFISGS-TQVIVRDYEDSEGKDAC--ILTS-----DSQRDVKVLEWRPN---GGRSLSVG 163 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d-~~i~iw~~~~~~~~~~~--~~~~-----~~~~~v~~~~~sp~---~~~l~~~~ 163 (350)
..++|+|.|+|+++++ ... +.|++++... +.... .+.. .....+..|+|+|+ ++.|+++.
T Consensus 28 ~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~--g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 28 KPHALLWGPDNQIWLT-ERATGKILRVNPES--GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SEEEEEECTTSCEEEE-ETTTCEEEEECTTT--CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCcEEEE-EcCCCEEEEEECCC--CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3679999999997776 454 4677776532 33211 1111 12456789999995 45555443
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.27 E-value=0.075 Score=45.67 Aligned_cols=150 Identities=11% Similarity=0.086 Sum_probs=80.3
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEe--cCCCCCCeeEEEEeeC---CCeEEEEec-C-----CcEE
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACIL--TSDSQRDVKVLEWRPN---GGRSLSVGC-K-----GGIC 169 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~--~~~~~~~v~~~~~sp~---~~~l~~~~~-d-----~~v~ 169 (350)
....++|.|+|++++ +..++.|.+++ + .+......+ ..........++|+|+ ++.++++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 367899999999555 46779888887 2 211111111 1122456899999998 555555444 2 5566
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeecc--CCCCCceeeEEECCCCCeEEEEEeC------------CC
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR--SQNGEQITALSWGPDGRYLASASYE------------SS 235 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~g~~l~~~~~d------------~g 235 (350)
.++... ..... .-.+...+. .........++|.|||..+++.+.. .|
T Consensus 109 r~~~~~-~~~~~------------------~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 109 RLRHLG-ERGVL------------------DRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp EEEECS-SCEEE------------------EEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSS
T ss_pred EEEeCC-CCcCc------------------eEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCce
Confidence 666652 11100 000111122 1001134689999999655554321 14
Q ss_pred eEEEEeCCCC-------------CceeeeecCCCeEEEEEcC-CCCEEEEE
Q 018806 236 SFTIWDVAQG-------------LGTPIRRGFGGLSILKWSP-TGDYFFAA 272 (350)
Q Consensus 236 ~i~iwd~~~~-------------~~~~~~~~~~~v~~~~~sp-~g~~l~~~ 272 (350)
.|..++.... ..............++|+| +|+++++-
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 170 KILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp EEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEE
T ss_pred EEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEE
Confidence 6777776531 1112222334567899999 66655443
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.26 E-value=0.042 Score=47.16 Aligned_cols=111 Identities=10% Similarity=0.092 Sum_probs=68.6
Q ss_pred ceeeEEECC--CCC-eEEEEEeC--CCeEEEEeCCCCCc--eeeee--c--CCCeEEEEEcCCCCEEEEEec--------
Q 018806 214 QITALSWGP--DGR-YLASASYE--SSSFTIWDVAQGLG--TPIRR--G--FGGLSILKWSPTGDYFFAAKF-------- 274 (350)
Q Consensus 214 ~v~~~~~sp--~g~-~l~~~~~d--~g~i~iwd~~~~~~--~~~~~--~--~~~v~~~~~sp~g~~l~~~~~-------- 274 (350)
....+.+.+ +|+ +|+.+... +.+|.+|++..... ..+.. + -.....+.+.++|++.++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 456666655 454 34444332 24788887765422 22211 2 245788999999987776541
Q ss_pred ---------CCeEEEEeCCCCceeccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 275 ---------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 275 ---------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
.|.|+-+|. ++...+...-...+.++|||||+.|+++......++.+++.
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 245555554 44443333345678999999999999998666677777765
No 305
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.19 E-value=0.022 Score=48.69 Aligned_cols=155 Identities=9% Similarity=0.059 Sum_probs=81.3
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeE--e---cCCCCCCeeEEEEeeC---CCeEEEE-e--cCCcEE
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACI--L---TSDSQRDVKVLEWRPN---GGRSLSV-G--CKGGIC 169 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~--~---~~~~~~~v~~~~~sp~---~~~l~~~-~--~d~~v~ 169 (350)
..+.|+|.|||+++++--..|.|++++.+. +..... + ..........|+++|+ +..+++. + .++.|.
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~--g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKT--GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTT--CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCC--CcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 368999999999777644488888887532 332111 1 1123456899999995 3444332 2 234454
Q ss_pred EEecCCCCCC-ceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEe------------CCCe
Q 018806 170 IWAPSYPGNA-ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASY------------ESSS 236 (350)
Q Consensus 170 iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~------------d~g~ 236 (350)
-|.+...... ..+.. .-.++..+..........|+|.|||.++++.+. ..|.
T Consensus 111 R~~~~~~~~~~~~~~~---------------~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 111 RMLYDEKKPSGEQLGA---------------PDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp EEEBCTTSCTTCCBCC---------------CEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTC
T ss_pred EEEeCCCCcccccCCC---------------cEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCE
Confidence 4554421100 00000 001111121111113467999999977666542 1246
Q ss_pred EEEEeCCCC--------CceeeeecCCCeEEEEEcCCCCEEEEE
Q 018806 237 FTIWDVAQG--------LGTPIRRGFGGLSILKWSPTGDYFFAA 272 (350)
Q Consensus 237 i~iwd~~~~--------~~~~~~~~~~~v~~~~~sp~g~~l~~~ 272 (350)
|.-.+.... ..............++|+|+|++.++-
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred EEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 666665532 111122233557789999998765543
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.17 E-value=0.15 Score=47.37 Aligned_cols=189 Identities=10% Similarity=0.032 Sum_probs=120.1
Q ss_pred EEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEec-CCcEEEEecCCCCCCceeecccccccc
Q 018806 113 IVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLG 191 (350)
Q Consensus 113 ~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~ 191 (350)
+|+.+ ..+.|+..+++...... ..+....-..+.+++|.+.++.++.+.. .+.|+.+++... ....+.
T Consensus 319 ~Ll~~-~~~~i~~i~l~~~~~~~-~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~-~~~~v~-------- 387 (619)
T 3s94_A 319 LLLLA-RRTDLRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS-GSQFVV-------- 387 (619)
T ss_dssp EEEEE-ESSCEEEEESSSTTCCC-EECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEE--------
T ss_pred EEEEE-cccceEEEecCCCccce-eEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC-ccEEEE--------
Confidence 45544 34567777776432222 1221122345788999987677776665 488888887622 211111
Q ss_pred eecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeee-cCCCeEEEEEcCCCCEEE
Q 018806 192 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRR-GFGGLSILKWSPTGDYFF 270 (350)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~ 270 (350)
... -.....+++.+.++.|+.+....+.|.+.++.......+.. .-.....+++.|....|+
T Consensus 388 ----------------~~~-~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly 450 (619)
T 3s94_A 388 ----------------TAQ-IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMY 450 (619)
T ss_dssp ----------------CSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEE
T ss_pred ----------------ECC-CCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEE
Confidence 111 14567899988777777766555799999998765544443 346788999999755555
Q ss_pred EEec--CCeEEEEeCCCCceeccc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCCCC
Q 018806 271 AAKF--DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 329 (350)
Q Consensus 271 ~~~~--d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~~~ 329 (350)
.... ...|...+++......+. ..-.....+++++++..|+.+..+...+..+++....
T Consensus 451 ~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 451 WTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred EecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence 4432 367877787654443333 2345678999999999999988766788888876543
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.82 E-value=0.05 Score=46.77 Aligned_cols=148 Identities=16% Similarity=0.119 Sum_probs=78.4
Q ss_pred CeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC--
Q 018806 146 DVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-- 223 (350)
Q Consensus 146 ~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-- 223 (350)
....|+|.|+|+.++++...+.|++++.. ......+... ..+..........++|+|+
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~-------------------~~v~~~g~~g~~gia~~pdf~ 78 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGV-------------------PDVWAHGQGGLLDVVLAPDFA 78 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSC-------------------CCCCCSTTCSEEEEEECTTHH
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCC-------------------cccccCCCCCceeEEECCCCC
Confidence 46889999997646666677988888743 1111111000 0000111246689999996
Q ss_pred -CCeEEEEE-e-------CCCeEEEEeCCCCC-----ceeeeec-------CCCeEEEEEcCCCCEEEEEec--------
Q 018806 224 -GRYLASAS-Y-------ESSSFTIWDVAQGL-----GTPIRRG-------FGGLSILKWSPTGDYFFAAKF-------- 274 (350)
Q Consensus 224 -g~~l~~~~-~-------d~g~i~iwd~~~~~-----~~~~~~~-------~~~v~~~~~sp~g~~l~~~~~-------- 274 (350)
+..|+.+. . . ..|..|+..... ...+... ......++|.|||.+.++.+.
T Consensus 79 ~~g~lYv~~~~~~~~g~~~-~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q 157 (353)
T 2g8s_A 79 QSRRIWLSYSEVGDDGKAG-TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQ 157 (353)
T ss_dssp HHCEEEEEEEEECSSSCEE-EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGG
T ss_pred CCCEEEEEEeCCCCCCCce-eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccC
Confidence 45554442 2 2 257777665431 1112111 122457999999965555433
Q ss_pred -----CCeEEEEeCCCC-------------ceeccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 275 -----DGTFYLWETNTW-------------TSEPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 275 -----d~~v~iwd~~~~-------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
.+.|.-++.+.. ....+.........++|+|+...|.++.
T Consensus 158 ~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 158 DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEe
Confidence 246777776532 1111111223468899999433444443
No 308
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.77 E-value=0.063 Score=49.50 Aligned_cols=174 Identities=10% Similarity=0.039 Sum_probs=87.5
Q ss_pred CCEEEEEECCCeEEEEEccCCCCCceeEecCCC-C--CCeeE-EEEeeCCCeEEEEec------CCcEEEEecCCCCCCc
Q 018806 111 KHIVAFISGSTQVIVRDYEDSEGKDACILTSDS-Q--RDVKV-LEWRPNGGRSLSVGC------KGGICIWAPSYPGNAA 180 (350)
Q Consensus 111 g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~-~--~~v~~-~~~sp~~~~l~~~~~------d~~v~iwd~~~~~~~~ 180 (350)
+..|++++.|+.+..+|..+ ++..-...... . ..+.+ ... -+ ..+++++. ++.|+.+|..+++...
T Consensus 115 ~~~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKT--GKINWEVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTT--CCEEEEEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCC--CCEEEEecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 55677778899998888854 55443332111 0 11221 111 23 45655554 6889999988665544
Q ss_pred eeecccccccc--e--e----cC-C----CCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeC------------C-
Q 018806 181 SVRSGAASFLG--A--L----SR-G----PGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYE------------S- 234 (350)
Q Consensus 181 ~~~~~~~~~~~--~--~----~~-~----~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d------------~- 234 (350)
.+......... . . .+ + ....|.- .............+++.++...++.++.+ +
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~-~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEG-DAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSST-TGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcc-cceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 33322110000 0 0 00 0 0000000 00000000111245666665566555431 0
Q ss_pred --CeEEEEeCCCCCceeeeecC---C----CeEE---EEEcCCCC---EEEEEecCCeEEEEeCCCCcee
Q 018806 235 --SSFTIWDVAQGLGTPIRRGF---G----GLSI---LKWSPTGD---YFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 235 --g~i~iwd~~~~~~~~~~~~~---~----~v~~---~~~sp~g~---~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
+.|..+|.++++.+...... . .+.. +...++|+ .++.++.+|.++++|.++++..
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 26999999999876543211 1 1111 22235774 5677888999999999999873
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.76 E-value=0.11 Score=44.76 Aligned_cols=144 Identities=15% Similarity=0.166 Sum_probs=79.0
Q ss_pred CCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC-
Q 018806 145 RDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD- 223 (350)
Q Consensus 145 ~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~- 223 (350)
.....++|.|+| .++++..++.|++++.. +. ..+... ..... .......++++|+
T Consensus 29 ~~P~~ia~~pdG-~l~V~e~~g~I~~~d~~--G~-~~~~~~-------------------~v~~~-g~~g~~gia~~pdf 84 (354)
T 3a9g_A 29 EVPWSIAPLGGG-RYLVTERPGRLVLISPS--GK-KLVASF-------------------DVANV-GEAGLLGLALHPEF 84 (354)
T ss_dssp SCEEEEEEEETT-EEEEEETTTEEEEECSS--CE-EEEEEC-------------------CCCCS-TTCSEEEEEECTTT
T ss_pred CCCeEEEEcCCC-eEEEEeCCCEEEEEeCC--Cc-eEeecc-------------------ceeec-CCCceeeEEeCCCC
Confidence 357899999996 56666677988888632 22 111110 00111 1246789999997
Q ss_pred --CCeEEEEEe----C----CCeEEEEeCCCC--C---ceeee---e--cCCCeEEEEEcCCCCEEEEEec---------
Q 018806 224 --GRYLASASY----E----SSSFTIWDVAQG--L---GTPIR---R--GFGGLSILKWSPTGDYFFAAKF--------- 274 (350)
Q Consensus 224 --g~~l~~~~~----d----~g~i~iwd~~~~--~---~~~~~---~--~~~~v~~~~~sp~g~~l~~~~~--------- 274 (350)
+..|+.+.. + + .|..|+.... . ...+. . .......++|.|||.+.++.+.
T Consensus 85 ~~~g~lyv~~~~~~~~~~~~~-~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d 163 (354)
T 3a9g_A 85 PKKSWVYLYASYFAEGGHIRN-RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQD 163 (354)
T ss_dssp TTSCEEEEEEEEECGGGCEEE-EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTC
T ss_pred CcCCEEEEEEeccCCCCCcce-EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccC
Confidence 455544432 2 3 6778877654 1 11111 1 1123467999999986665432
Q ss_pred ----CCeEEEEeCCCC--------ceeccccCCCCeEEEEEcC-CCCEEEEEE
Q 018806 275 ----DGTFYLWETNTW--------TSEPWSSTSGFVTGATWDP-EGRMILLAF 314 (350)
Q Consensus 275 ----d~~v~iwd~~~~--------~~~~~~~~~~~v~~~~~s~-~g~~l~~~~ 314 (350)
.+.|.-++.+.. ....+.........++|+| +|++. ++.
T Consensus 164 ~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~-v~d 215 (354)
T 3a9g_A 164 LSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMV-ATE 215 (354)
T ss_dssp TTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEE-EEE
T ss_pred CCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEE-EEe
Confidence 245666665432 1111111122357899999 56544 444
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.62 E-value=0.31 Score=42.52 Aligned_cols=161 Identities=12% Similarity=0.144 Sum_probs=93.4
Q ss_pred ecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCC---CCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeec
Q 018806 108 HQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDS---QRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRS 184 (350)
Q Consensus 108 sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 184 (350)
..+|..|+++ .++.||.-++.... ....+...+ -..|..+..+|+| .+++..++..|.|-.++.+..... ..
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~--~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g~~~V~Vv~LP~~~~~~~-~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDS--LYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFNDNEIFVMEVPWGYSNVE-DV 103 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCS--SCEEEECTTTCCCCTTCEEEECTTS-SEEEEECSSEEEEEECCTTCSCCC-CH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCC--cceEEecCcccccCceeEEEECCCC-CEEEEecCCeEEEEEecCccccCc-cc
Confidence 3466666664 56788888886332 222332222 2368889999995 455556677899999883221110 00
Q ss_pred ccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC---CCeEEEEEeCCCeEEEEeCCCCCceee-e-------e-
Q 018806 185 GAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD---GRYLASASYESSSFTIWDVAQGLGTPI-R-------R- 252 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---g~~l~~~~~d~g~i~iwd~~~~~~~~~-~-------~- 252 (350)
......... .+ ............|..+.|+|- +..|++-..| ++|++||+......+. . +
T Consensus 104 ~~~~~~q~~------ty-~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD-~~Ir~yDl~~s~~~P~~L~k~~~~fg~ 175 (452)
T 3pbp_A 104 SIQDAFQIF------HY-SIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED-DTITMFDILNSQEKPIVLNKPNNSFGL 175 (452)
T ss_dssp HHHHTTEEE------EE-EGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT-SCEEEEETTCTTSCCEEESCCCSEEES
T ss_pred cccccccee------EE-EcCCcccCCCCceeEEEeccccCCCCeEEEEecC-CEEEEEEcccCCCCCcchhccccccCC
Confidence 000000000 00 000111111368999999995 5578888888 5999999986432211 1 1
Q ss_pred --cCCCeEEEEEcCCCCEEEEEe--cCCeEEEE
Q 018806 253 --GFGGLSILKWSPTGDYFFAAK--FDGTFYLW 281 (350)
Q Consensus 253 --~~~~v~~~~~sp~g~~l~~~~--~d~~v~iw 281 (350)
....+.+++|..+|-.|...+ .+|.|+-.
T Consensus 176 d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 176 DARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 114588999999887777655 77888754
No 311
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.61 E-value=0.052 Score=51.15 Aligned_cols=169 Identities=12% Similarity=0.078 Sum_probs=94.0
Q ss_pred CCEEEEEECCCeEEEEEccCCCCCceeEecCCCC---CCeeE-EEEeeCCCeEEEEec------CCcEEEEecCCCCCCc
Q 018806 111 KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQ---RDVKV-LEWRPNGGRSLSVGC------KGGICIWAPSYPGNAA 180 (350)
Q Consensus 111 g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~---~~v~~-~~~sp~~~~l~~~~~------d~~v~iwd~~~~~~~~ 180 (350)
+..|++++.|+.+..+|..+ ++..-....... ..+.+ ... .+ ..++++.. ++.|+.+|..+++...
T Consensus 117 ~~~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~P~v-~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKT--GKAIWSQQTTDPAKPYSITGAPRV-VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp BTEEEEECTTSEEEEEETTT--CCEEEEEECSCTTSSCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCC--CCEeeeeccCCCCCcceecCCCEE-EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 45677788899999999854 654443322111 11111 111 13 45555433 4789999988665544
Q ss_pred eeecccccccce-----e-----cCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCC---------------
Q 018806 181 SVRSGAASFLGA-----L-----SRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESS--------------- 235 (350)
Q Consensus 181 ~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g--------------- 235 (350)
.+......+... + .......|. ..+. ......++++|+...++.++.+ +
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~----~~~g-g~~w~~~a~d~~~~~vy~~~~~-g~~w~~~~~~~~~gd~ 266 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWK----LGGG-GTVWDSMAYDPELDLLYVGTGN-GSPWNREVRSPGGGDN 266 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHH----HCEE-CCCCSCEEEETTTTEEEEECCC-EESSCHHHHSTTCCCC
T ss_pred EecccCCCCCccccccccccccccCCccceee----eCCC-CccccceEEcCCCCEEEEeCCC-CCccccCCCCCCCCCc
Confidence 433211000000 0 000000000 0011 1233467888888888777655 3
Q ss_pred ----eEEEEeCCCCCceeeeec---C-------CCeEEEEEcCCCC---EEEEEecCCeEEEEeCCCCcee
Q 018806 236 ----SFTIWDVAQGLGTPIRRG---F-------GGLSILKWSPTGD---YFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 236 ----~i~iwd~~~~~~~~~~~~---~-------~~v~~~~~sp~g~---~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
.|..+|.++++....... . .+.....+..+|+ .++.++.+|.++++|.++|+..
T Consensus 267 l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 267 LYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 499999999987654432 1 2222233334675 6888899999999999999874
No 312
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.56 E-value=0.1 Score=44.45 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=84.9
Q ss_pred CCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECC----CCCe--EE
Q 018806 155 NGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP----DGRY--LA 228 (350)
Q Consensus 155 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp----~g~~--l~ 228 (350)
....++....++.+.+||+. ++....+.. +.+..+..-| .|+. ++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~~l~~~~~----------------------------g~~nnVD~r~~~~l~g~~~dla 89 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GKMLHSYNT----------------------------GKLNNVDIRYDFPLNGKKVDIA 89 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SCEEEEECC----------------------------SCEEEEEEEEEEEETTEEEEEE
T ss_pred CccEEEEEcCCCCEEEEcCC-CcEEEEccC----------------------------CCcccEEEecccccCCceEeEE
Confidence 33455555556889999994 443333211 2344444433 2332 33
Q ss_pred EEE-eC--CCeEEEEeCC--CCCceeeee------cC-CCeEEEEE--cCC-CC-EEEEEecCCeEEEEeCC---CCce-
Q 018806 229 SAS-YE--SSSFTIWDVA--QGLGTPIRR------GF-GGLSILKW--SPT-GD-YFFAAKFDGTFYLWETN---TWTS- 288 (350)
Q Consensus 229 ~~~-~d--~g~i~iwd~~--~~~~~~~~~------~~-~~v~~~~~--sp~-g~-~l~~~~~d~~v~iwd~~---~~~~- 288 (350)
.++ .+ +++|.+|++. +++...+.. .. ..+..+|+ +|. ++ ++++...+|.+..|++. .++.
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~ 169 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS 169 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE
T ss_pred EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc
Confidence 333 33 3599999763 443322211 11 55677887 774 54 57778888999998883 3322
Q ss_pred ---eccccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeC
Q 018806 289 ---EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 289 ---~~~~~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~ 326 (350)
.+.....+.+..|+..+....|+++-... -+|.++..
T Consensus 170 ~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~ 209 (355)
T 3amr_A 170 GKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAE 209 (355)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTT-EEEEEECS
T ss_pred ceEEEEecCCCCcceEEEcCCCCeEEEecccc-eEEEEeCC
Confidence 23334556788999999999999887553 47777654
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.51 E-value=0.21 Score=44.58 Aligned_cols=109 Identities=12% Similarity=0.191 Sum_probs=58.2
Q ss_pred CCeeEEEEeeCCCeEEEEecC-CcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeecc-CCCCCceeeEEECC
Q 018806 145 RDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGP 222 (350)
Q Consensus 145 ~~v~~~~~sp~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp 222 (350)
...+.|+|.|+|+ ++++... +.|++++... +....+.... ..+. .........|+|+|
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~-g~~~~~~~~~------------------~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVNPES-GSVKTVFQVP------------------EIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTT-CCEEEEEECT------------------TCCCCTTSSCSEEEEEECT
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEECCC-CcEeEEecCC------------------ccccccCCCCceeEEEECC
Confidence 3567999999965 5555555 4687776542 2211111100 0010 01125678999999
Q ss_pred C---CCeEEEEEeC------------CCeEEEEeCCCCC-----ceeeee-----cCCCeEEEEEcCCCCEEEEEe
Q 018806 223 D---GRYLASASYE------------SSSFTIWDVAQGL-----GTPIRR-----GFGGLSILKWSPTGDYFFAAK 273 (350)
Q Consensus 223 ~---g~~l~~~~~d------------~g~i~iwd~~~~~-----~~~~~~-----~~~~v~~~~~sp~g~~l~~~~ 273 (350)
+ +..|+.+... ...|..|+..... ...+.. .......++|.|||.+.++.+
T Consensus 87 df~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 87 DFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 5 5555444321 1256666654321 111221 124578899999998766544
No 314
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.41 E-value=0.076 Score=49.06 Aligned_cols=47 Identities=15% Similarity=0.332 Sum_probs=33.2
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCeE--EEEEcCCCCEEE
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLS--ILKWSPTGDYFF 270 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v~--~~~~sp~g~~l~ 270 (350)
.+..++.++.| |.++.||.++++.+........+. -+.|..+|+..+
T Consensus 496 agglvf~g~~d-g~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 496 AGNLVFTGTGD-GYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp TTTEEEEECTT-SEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCEEEEECCC-CcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 35677778888 799999999999876555444433 266667887543
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.35 E-value=0.023 Score=44.80 Aligned_cols=98 Identities=10% Similarity=0.131 Sum_probs=64.5
Q ss_pred ceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee------eeec--CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC
Q 018806 214 QITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP------IRRG--FGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 285 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~------~~~~--~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~ 285 (350)
.+..++|+|+|...+. .+ |.++-.+..+..... .... -.....+.|.|+|.+.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~-G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LN-DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ET-TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eC-CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 6779999999886555 55 688887776533221 1111 122478999999987776 569998887644
Q ss_pred Cceeccc------c--CCCCeEEEEEcCCCCEEEEEECCC
Q 018806 286 WTSEPWS------S--TSGFVTGATWDPEGRMILLAFAGS 317 (350)
Q Consensus 286 ~~~~~~~------~--~~~~v~~~~~s~~g~~l~~~~~~~ 317 (350)
.....+. . .-..+..+.|.|+|.+-++. ++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ 155 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQ 155 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCc
Confidence 3322221 1 11357899999999988877 443
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.35 E-value=0.27 Score=38.77 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=85.2
Q ss_pred CCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeec--cCCCCCceeeEEECC
Q 018806 145 RDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFL--RSQNGEQITALSWGP 222 (350)
Q Consensus 145 ~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~sp 222 (350)
..+..++|+|+|. |.++ .++.++-.+.........+... ..+ .+. ..-.++.|.|
T Consensus 41 ~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~-------------------t~IG~~Gw--~~F~a~~fD~ 97 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRA-------------------KKIGNGGW--NQFQFLFFDP 97 (236)
T ss_dssp TTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHC-------------------EEEECSCG--GGCSEEEECT
T ss_pred ccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccc-------------------cEeccccc--ccceEEEECC
Confidence 3688999999855 5555 7776555444322111111110 000 011 1247889999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCce------eeee--cCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceec----
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGT------PIRR--GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP---- 290 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~------~~~~--~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~---- 290 (350)
+|.+.++ .| |.|+-++-.+.... .... .-..+..+.|.|+|.+.++. |+.++-....++....
T Consensus 98 ~G~LYav--~d-G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~ 172 (236)
T 1tl2_A 98 NGYLYAV--SK-DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLAR 172 (236)
T ss_dssp TSCEEEE--ET-TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHH
T ss_pred CCCEEEe--CC-CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccc
Confidence 9987777 56 79988886443221 1111 11568899999999866665 7776554444332211
Q ss_pred --cc--cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEE
Q 018806 291 --WS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIH 324 (350)
Q Consensus 291 --~~--~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~ 324 (350)
.. ..-.....+.|+++|...++. +..++...
T Consensus 173 ~~~~g~~g~~~yr~l~f~~~G~l~~v~---~g~~Y~~~ 207 (236)
T 1tl2_A 173 ATKIGQGGWDTFKFLFFSSVGTLFGVQ---GGKFYEDY 207 (236)
T ss_dssp CEEEESSSGGGEEEEEECTTSCEEEEE---TTEEEEES
T ss_pred cceeccCCcceEEEEEECCCCcEEEEe---CCeEEecC
Confidence 11 122234567799999988876 34566553
No 317
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.07 E-value=0.9 Score=42.02 Aligned_cols=30 Identities=10% Similarity=0.207 Sum_probs=22.6
Q ss_pred EEEcCCCCEEEEEecC----------------CeEEEEeCCCCcee
Q 018806 260 LKWSPTGDYFFAAKFD----------------GTFYLWETNTWTSE 289 (350)
Q Consensus 260 ~~~sp~g~~l~~~~~d----------------~~v~iwd~~~~~~~ 289 (350)
+++.++...++.+..+ +.|..+|.++++.+
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence 4566777777777654 38999999999984
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.44 E-value=0.24 Score=42.24 Aligned_cols=101 Identities=19% Similarity=0.132 Sum_probs=62.8
Q ss_pred CceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeee-------ecCCCeEEEEEcCC---CCEEEEE---ecCCeEE
Q 018806 213 EQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR-------RGFGGLSILKWSPT---GDYFFAA---KFDGTFY 279 (350)
Q Consensus 213 ~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~-------~~~~~v~~~~~sp~---g~~l~~~---~~d~~v~ 279 (350)
...+.++|.|||+.+++.-.. |.|++++...++...+. ...+....++++|+ ..+|.+. ..++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~-G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDE-ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTT-CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecC-CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 467899999999866655335 79999987666543322 23567899999995 3444432 2345666
Q ss_pred EEeCCCC-----ce---ec----cc-cCCCCeEEEEEcCCCCEEEEEE
Q 018806 280 LWETNTW-----TS---EP----WS-STSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 280 iwd~~~~-----~~---~~----~~-~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
-|.+..+ +. .. +. .....-..++|.|||.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 6666542 11 11 11 1122346799999997666543
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.52 E-value=1.7 Score=35.86 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=49.2
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecCC---CeEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCceec
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGFG---GLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTSEP 290 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~~---~v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~~~~ 290 (350)
+++.++.++.+. ..+.+||..+.+...+..... ....+. -++++++.|+.+ ..+.+||+.+.+-..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 667777766431 268999998876554432111 112222 266677777654 479999998876543
Q ss_pred cccC---CCCeEEEEEcCCCCEEEEEE
Q 018806 291 WSST---SGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 291 ~~~~---~~~v~~~~~s~~g~~l~~~~ 314 (350)
+... ......+. -+++.+++|+
T Consensus 237 ~~~~p~~r~~~~~~~--~~~~i~v~GG 261 (301)
T 2vpj_A 237 VTSMTTPRCYVGATV--LRGRLYAIAG 261 (301)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred CCCCCCcccceeEEE--ECCEEEEEcC
Confidence 3211 11112222 2567766665
No 320
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.93 E-value=0.29 Score=44.25 Aligned_cols=100 Identities=11% Similarity=0.057 Sum_probs=65.1
Q ss_pred ceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC------Cc----eeee---ecCCCeEEEEEcCCCCEEEEEecCCeEEE
Q 018806 214 QITALSWGPDGRYLASASYESSSFTIWDVAQG------LG----TPIR---RGFGGLSILKWSPTGDYFFAAKFDGTFYL 280 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~------~~----~~~~---~~~~~v~~~~~sp~g~~l~~~~~d~~v~i 280 (350)
....+..+|||++++.++.-+.++.++|++.- +. ..+. .-.-+....+|.++|.-..+.--|..|..
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 45678999999999988876569999998742 11 0111 12345788999999944445567999999
Q ss_pred EeCCCC----------cee-ccccCCCCeEEEE------EcCCCCEEEEEE
Q 018806 281 WETNTW----------TSE-PWSSTSGFVTGAT------WDPEGRMILLAF 314 (350)
Q Consensus 281 wd~~~~----------~~~-~~~~~~~~v~~~~------~s~~g~~l~~~~ 314 (350)
|++... ... ++.-| ..+-.+. -.+||++|++.+
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~-YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVH-YQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECS-SCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccc-cCCcccccCCCccCCCCccEEEEec
Confidence 998653 111 12122 2222332 267899998876
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.68 E-value=2.8 Score=35.32 Aligned_cols=169 Identities=6% Similarity=0.009 Sum_probs=98.0
Q ss_pred CccCeeEEEEecCCCEEEEEEC-------CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEe--eCCCeEEEEecC---
Q 018806 98 PEVDLQGVSWHQHKHIVAFISG-------STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWR--PNGGRSLSVGCK--- 165 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~-------d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~~~l~~~~~d--- 165 (350)
.+..|-.-..+++.+|++..+- .|.+.+|..+ +...+...+|......+... +....+++.+..
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT----TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec----ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 3567888888999998887542 4778899984 23344445665433333221 111234443332
Q ss_pred -CcEEEEecCCCC-CCceeecccccccceecCCCCCceEEeeeccCC--CCCceeeEEECCCCCeEEEEEeCCCeEEEEe
Q 018806 166 -GGICIWAPSYPG-NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ--NGEQITALSWGPDGRYLASASYESSSFTIWD 241 (350)
Q Consensus 166 -~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd 241 (350)
++++|-++.... ....+.. +..+.+... ...-..++..|+.-..++..+.- |.|++||
T Consensus 226 g~kLhIiEi~~~~~~~~~f~k-----------------k~vdi~fppea~~DFPVamqvs~kygviyviTK~-G~ihlyD 287 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPK-----------------KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY-GYIHLYD 287 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCC-----------------EEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT-SEEEEEE
T ss_pred CcEEEEEEcCCCCCCCCCccc-----------------ccceeeCCccccCCceEEEEecccCCEEEEEeCC-cEEEEEE
Confidence 688888886431 1111100 011111111 12345677888877778888888 7999999
Q ss_pred CCCCCceeeeec-CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 242 VAQGLGTPIRRG-FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 242 ~~~~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
+.++.+.....- ...|...+-+....=+++....|.|.--.++..+.
T Consensus 288 leTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 288 LETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp TTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred cccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 999988765543 34555545444434455556777776666666554
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.31 E-value=2.1 Score=40.45 Aligned_cols=179 Identities=9% Similarity=-0.018 Sum_probs=86.1
Q ss_pred CCCEEEEEECC------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecC--CcEEEEecCCCCCCce
Q 018806 110 HKHIVAFISGS------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK--GGICIWAPSYPGNAAS 181 (350)
Q Consensus 110 ~g~~la~~s~d------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--~~v~iwd~~~~~~~~~ 181 (350)
+++.++.|+.+ ..+.+||..+.+....... .....-.+++...++..++.+|.+ +.+.+||....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~--p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~----- 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL--SHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE----- 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC--SBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT-----
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC--CCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC-----
Confidence 67777777643 2466777654222111111 111111222332365666666654 36788887632
Q ss_pred eecccccccceecCCCCCceEEeee---ccCCCCCceeeEEECCC-CCeEEEEEeCC------CeEEEEeCCCCC-----
Q 018806 182 VRSGAASFLGALSRGPGTRWTLVDF---LRSQNGEQITALSWGPD-GRYLASASYES------SSFTIWDVAQGL----- 246 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~sp~-g~~l~~~~~d~------g~i~iwd~~~~~----- 246 (350)
.|..... +.... .....+.+..+ ++.++.|+.+. ..+.+||+.+..
T Consensus 524 ------------------~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~ 584 (695)
T 2zwa_A 524 ------------------IFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPI 584 (695)
T ss_dssp ------------------EEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCE
T ss_pred ------------------ceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccce
Confidence 2222221 11111 12233555554 66777776521 268999998877
Q ss_pred -ceeeeec--CC-CeEEEEEcCCCCEEEEEec--------CCeEEEEeCCCCceeccc--cC------CCC-eEEEEEcC
Q 018806 247 -GTPIRRG--FG-GLSILKWSPTGDYFFAAKF--------DGTFYLWETNTWTSEPWS--ST------SGF-VTGATWDP 305 (350)
Q Consensus 247 -~~~~~~~--~~-~v~~~~~sp~g~~l~~~~~--------d~~v~iwd~~~~~~~~~~--~~------~~~-v~~~~~s~ 305 (350)
...+... .. .-.+++...++++++.|+. ...|.+||..+.+-.... .. ... -.+++...
T Consensus 585 ~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~ 664 (695)
T 2zwa_A 585 TVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTS 664 (695)
T ss_dssp EEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC-
T ss_pred EEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeC
Confidence 2332221 11 1112333333777777764 346999999887653211 00 000 12344456
Q ss_pred CCCEEEEEE
Q 018806 306 EGRMILLAF 314 (350)
Q Consensus 306 ~g~~l~~~~ 314 (350)
+|+.+++|+
T Consensus 665 ~g~i~v~GG 673 (695)
T 2zwa_A 665 MGTIHIIGG 673 (695)
T ss_dssp --CEEEECC
T ss_pred CCEEEEEeC
Confidence 667777775
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.74 E-value=3.6 Score=33.84 Aligned_cols=65 Identities=11% Similarity=0.128 Sum_probs=38.8
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCcee
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTSE 289 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~~~ 289 (350)
+++.++.++.+. ..+.+||..+.+...+.... .....+. -++++++.|+.+ ..+.+||.++.+-.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 566677776531 26999999887655443211 1112222 266777777655 36788888876543
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.40 E-value=4 Score=33.59 Aligned_cols=68 Identities=10% Similarity=0.017 Sum_probs=39.7
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecCCC-eEEEEEcCCCCEEEEEecCC-----eEEEEeCCCCceec
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGFGG-LSILKWSPTGDYFFAAKFDG-----TFYLWETNTWTSEP 290 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~~~-v~~~~~sp~g~~l~~~~~d~-----~v~iwd~~~~~~~~ 290 (350)
+++.++.++.+. ..+.+||..+.+...+.....+ ....+..-++++++.|+.++ .+.+||.++.+-..
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 567777776531 2689999988765544322111 11111122677777776543 58899998776543
No 325
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.10 E-value=6.2 Score=35.11 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=33.6
Q ss_pred eeEEEEecCCC-EEEEEECCCeEEEEEccCCC-CCceeEec----C----CCCCCeeEEEEeeC
Q 018806 102 LQGVSWHQHKH-IVAFISGSTQVIVRDYEDSE-GKDACILT----S----DSQRDVKVLEWRPN 155 (350)
Q Consensus 102 V~~v~~sp~g~-~la~~s~d~~i~iw~~~~~~-~~~~~~~~----~----~~~~~v~~~~~sp~ 155 (350)
-+.|+|.|||. .|+++...|.|++++.+... ...+..+. . ........|+|+|+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 57899999996 45556789999988753210 11111111 0 11457889999986
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.90 E-value=5.2 Score=33.83 Aligned_cols=55 Identities=9% Similarity=-0.157 Sum_probs=29.8
Q ss_pred eEEEEeCCCCCceeeeecCCC-eEEEEEcCCCCEEEEEecCC------eEEEEeCCCCceec
Q 018806 236 SFTIWDVAQGLGTPIRRGFGG-LSILKWSPTGDYFFAAKFDG------TFYLWETNTWTSEP 290 (350)
Q Consensus 236 ~i~iwd~~~~~~~~~~~~~~~-v~~~~~sp~g~~l~~~~~d~------~v~iwd~~~~~~~~ 290 (350)
.+.+||..+.+...+.....+ ....+...++++++.|+.++ .|.++++++++...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 478899988765544322211 11122334677778887542 57777998888743
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.89 E-value=4.6 Score=33.25 Aligned_cols=89 Identities=13% Similarity=0.005 Sum_probs=48.3
Q ss_pred CCCeEEEEEeC--------CCeEEEEeCCCCCceeeeecCCC--eEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCc
Q 018806 223 DGRYLASASYE--------SSSFTIWDVAQGLGTPIRRGFGG--LSILKWSPTGDYFFAAKFD-----GTFYLWETNTWT 287 (350)
Q Consensus 223 ~g~~l~~~~~d--------~g~i~iwd~~~~~~~~~~~~~~~--v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~ 287 (350)
+++.++.++.+ ...+.+||..+.+...+.....+ -.+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 56666666532 12688999988765544322111 112222 266677776543 468999998876
Q ss_pred eeccccC---CCCeEEEEEcCCCCEEEEEE
Q 018806 288 SEPWSST---SGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 288 ~~~~~~~---~~~v~~~~~s~~g~~l~~~~ 314 (350)
-..+... ......+.+ +++.+++|+
T Consensus 228 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 255 (306)
T 3ii7_A 228 WKMVSPMPWKGVTVKCAAV--GSIVYVLAG 255 (306)
T ss_dssp EEECCCCSCCBSCCEEEEE--TTEEEEEEC
T ss_pred EEECCCCCCCccceeEEEE--CCEEEEEeC
Confidence 5433211 112222333 567777775
No 328
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.50 E-value=4.6 Score=35.95 Aligned_cols=103 Identities=15% Similarity=0.183 Sum_probs=59.6
Q ss_pred CceeeEEECCCCC-eEEEEEeCCCeEEEEeCCCCC-cee-------eee-----cCCCeEEEEEcCC----CCEEEEEec
Q 018806 213 EQITALSWGPDGR-YLASASYESSSFTIWDVAQGL-GTP-------IRR-----GFGGLSILKWSPT----GDYFFAAKF 274 (350)
Q Consensus 213 ~~v~~~~~sp~g~-~l~~~~~d~g~i~iwd~~~~~-~~~-------~~~-----~~~~v~~~~~sp~----g~~l~~~~~ 274 (350)
...+.|+|.|+|. .|+++... |.|++++..... ... +.. .......++|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3568999999996 45555666 799999754321 111 111 1457889999996 443333222
Q ss_pred --C----------CeEEEEeCCCC---c-----ee---ccc--cCCCCeEEEEEcCCCCEEEEEECC
Q 018806 275 --D----------GTFYLWETNTW---T-----SE---PWS--STSGFVTGATWDPEGRMILLAFAG 316 (350)
Q Consensus 275 --d----------~~v~iwd~~~~---~-----~~---~~~--~~~~~v~~~~~s~~g~~l~~~~~~ 316 (350)
+ ..|.-|.+..+ . .+ .+. .....-..|+|.|||.+.++.++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13444655431 1 11 111 223446889999999876665543
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.12 E-value=6.3 Score=33.25 Aligned_cols=214 Identities=11% Similarity=0.094 Sum_probs=120.5
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
.-+.-.+|..+.||.-. ..++.|+|++. ...+.... ....|.-=+|-.+ ..++--++..|+-|++.....+.+
T Consensus 69 AdsAIMnP~~~ViALra-g~~LQiFnlet--K~klks~~--~~e~VvfWkWis~--~~L~lVT~taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 69 ADSAIMNPASKVIALKA-GKTLQIFNIEM--KSKMKAHT--MTDDVTFWKWISL--NTVALVTDNAVYHWSMEGESQPVK 141 (365)
T ss_dssp CSEEEECSSSSEEEEEE-TTEEEEEETTT--TEEEEEEE--CSSCEEEEEECSS--SEEEEEESSEEEEEESSTTCCCEE
T ss_pred cceeeeCCCccEEEEec-CCeEEEechHH--hhhhccee--cCCccEEEEecCC--CeEEEEcCCcEEEEcccCCCCCce
Confidence 34555689989888765 78899999975 33334332 2356777778655 344555667899999986555555
Q ss_pred eecccccc----cceecCCCCCceEEee------------------------eccCCCCCceeeEEECCCC-----CeEE
Q 018806 182 VRSGAASF----LGALSRGPGTRWTLVD------------------------FLRSQNGEQITALSWGPDG-----RYLA 228 (350)
Q Consensus 182 ~~~~~~~~----~~~~~~~~~~~~~~~~------------------------~~~~~~~~~v~~~~~sp~g-----~~l~ 228 (350)
+...+... +-....+++.+|.++- .+.+|. ..-..+-.+| +.++
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGha---a~F~~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA---ASFAQFKMEGNAEESTLFC 218 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSE---EEEEEECCTTCSSCEEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeee---eeeEEEecCCCCCCceEEE
Confidence 54443222 2224556677776432 233331 1112222222 2344
Q ss_pred EEEeC--CCeEEEEeCCCC---Cce------eee-ec---CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-
Q 018806 229 SASYE--SSSFTIWDVAQG---LGT------PIR-RG---FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS- 292 (350)
Q Consensus 229 ~~~~d--~g~i~iwd~~~~---~~~------~~~-~~---~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~- 292 (350)
.+... .+++.+.++... ... .+. .. .+-..++..++.-..+..-+.-|.|++||++++.+....
T Consensus 219 fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 44331 148899988543 110 111 11 234567888887778888899999999999999984322
Q ss_pred cCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEEeCC
Q 018806 293 STSGFVTGATWDPE-GRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 293 ~~~~~v~~~~~s~~-g~~l~~~~~~~~~~~~~~~~~ 327 (350)
-....|...+-+.+ +-.+.+. ..+.+..+.+..
T Consensus 299 IS~d~iF~ta~~~~~~Gi~~Vn--r~GqVl~v~v~~ 332 (365)
T 2xzh_A 299 ISGETIFVTAPHEATAGIIGVN--RKGQVLSVCVEE 332 (365)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEE--TTCEEEEEEECT
T ss_pred cCCCceEEecccCCCCcEEEEc--CCCEEEEEEECc
Confidence 12234433333333 3333222 344566666554
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.69 E-value=8.3 Score=33.95 Aligned_cols=168 Identities=6% Similarity=0.002 Sum_probs=99.5
Q ss_pred ccCeeEEEEecCCCEEEEEEC-------CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEe--eCCCeEEEEecC----
Q 018806 99 EVDLQGVSWHQHKHIVAFISG-------STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWR--PNGGRSLSVGCK---- 165 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~-------d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~~~l~~~~~d---- 165 (350)
+..|..-..+++.+|++..+- .|.+.+|..+. .......+|......+... +....+++.+..
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 567888888999999886542 47788999852 2244445776544433332 111234444433
Q ss_pred CcEEEEecCCCC-CCceeecccccccceecCCCCCceEEeeeccC--CCCCceeeEEECCCCCeEEEEEeCCCeEEEEeC
Q 018806 166 GGICIWAPSYPG-NAASVRSGAASFLGALSRGPGTRWTLVDFLRS--QNGEQITALSWGPDGRYLASASYESSSFTIWDV 242 (350)
Q Consensus 166 ~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~ 242 (350)
++++|.++.... ....+.. +..+.+.. ....-..++..|+.-..++..+.- |.|.+||+
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~k-----------------k~vdv~fppe~~~DFPvamqvs~kygviyviTK~-G~i~lyDl 287 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPK-----------------KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY-GYIHLYDL 287 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCC-----------------EEEECCCCTTSTTCCEEEEEEETTTTEEEEEETT-SEEEEEET
T ss_pred cEEEEEEcCCCccCCCCccc-----------------eeeeeeCCcccccCceeEEEecccCCEEEEEecC-ceEEEEec
Confidence 788998886431 1111100 01111111 112345677888877788888888 79999999
Q ss_pred CCCCceeeeec-CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 243 AQGLGTPIRRG-FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 243 ~~~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
.++.+.....- ...|...+-+....=+++....|.|.--.++..+.
T Consensus 288 eTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 288 ETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp TTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred ccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 99988765543 34555555555444555566777776666666554
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.39 E-value=6.8 Score=32.44 Aligned_cols=66 Identities=17% Similarity=0.293 Sum_probs=38.9
Q ss_pred CCCeEEEEEeCCC----eEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEecC--------------CeEEEE
Q 018806 223 DGRYLASASYESS----SFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKFD--------------GTFYLW 281 (350)
Q Consensus 223 ~g~~l~~~~~d~g----~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d--------------~~v~iw 281 (350)
+++.++.++.+.. .+.+||..+.+...+.... .....+. -++++++.|+.+ ..+.+|
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEe
Confidence 6677777776421 6889999887655443211 1112222 266677777653 247788
Q ss_pred eCCCCceec
Q 018806 282 ETNTWTSEP 290 (350)
Q Consensus 282 d~~~~~~~~ 290 (350)
|+++.+-..
T Consensus 274 d~~~~~W~~ 282 (315)
T 4asc_A 274 NEEEKKWEG 282 (315)
T ss_dssp ETTTTEEEE
T ss_pred cCCCChhhh
Confidence 888766543
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.28 E-value=6.9 Score=32.31 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=38.1
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecCC--CeEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCcee
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGFG--GLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTSE 289 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~~~ 289 (350)
+++.++.++.+. ..+.+||+.+.+...+..... .-.+++. -++++++.|+.+ ..+.+||..+.+-.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 566777776531 269999998876544332111 1112222 256677777643 46788888776543
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.50 E-value=11 Score=35.61 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=42.4
Q ss_pred CCCCeEEEEEeCCC-eEEEEeCCCCCceeeee------cCCCeEEEEEcCC-CCEEEEEec--C-----CeEEEEeCCCC
Q 018806 222 PDGRYLASASYESS-SFTIWDVAQGLGTPIRR------GFGGLSILKWSPT-GDYFFAAKF--D-----GTFYLWETNTW 286 (350)
Q Consensus 222 p~g~~l~~~~~d~g-~i~iwd~~~~~~~~~~~------~~~~v~~~~~sp~-g~~l~~~~~--d-----~~v~iwd~~~~ 286 (350)
.+++.++.|+.+.. .+.+||..+.....+.. .......+.+..+ ++.++.|+. + +.+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 47788888876521 58999998876544332 1122233555655 666677765 2 46999999887
Q ss_pred c
Q 018806 287 T 287 (350)
Q Consensus 287 ~ 287 (350)
+
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 7
No 334
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.26 E-value=8.1 Score=31.67 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=48.1
Q ss_pred CCCeEEEEEeCC------CeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCce
Q 018806 223 DGRYLASASYES------SSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTS 288 (350)
Q Consensus 223 ~g~~l~~~~~d~------g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~~ 288 (350)
+++.++.++.+. ..+.+||..+.+...+.... .....+. -++++++.|+.+ ..+.+||..+.+-
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 566666665421 25889999887654432211 1112222 266777777654 4799999988765
Q ss_pred eccccCC--CCeEEEEEcCCCCEEEEEE
Q 018806 289 EPWSSTS--GFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 289 ~~~~~~~--~~v~~~~~s~~g~~l~~~~ 314 (350)
..+.... ..-..++ .-+++.+++|+
T Consensus 233 ~~~~~~~~~r~~~~~~-~~~~~i~v~GG 259 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVC-AVNGLLYVVGG 259 (302)
T ss_dssp EEECCCSSCCBSCEEE-EETTEEEEECC
T ss_pred eeCCCCCCccccCeEE-EECCEEEEECC
Confidence 4332111 1111222 23566766665
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.25 E-value=1.4 Score=39.99 Aligned_cols=108 Identities=13% Similarity=0.079 Sum_probs=62.7
Q ss_pred CeeEEEEeeCCCeEEEEec-CCcEEEEecCCC-----CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEE
Q 018806 146 DVKVLEWRPNGGRSLSVGC-KGGICIWAPSYP-----GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALS 219 (350)
Q Consensus 146 ~v~~~~~sp~~~~l~~~~~-d~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 219 (350)
....+..+|||+++++++. +.++.++|+..- ......... +..... -.-.....+
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~-----------------~~ae~e--~GlGPlHt~ 384 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDV-----------------IVGEPE--LGLGPLHTT 384 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGG-----------------EEECCB--CCSCEEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccc-----------------eEeecc--CCCcccEEE
Confidence 4567889999999888888 699999999721 111000000 011111 123567889
Q ss_pred ECCCCCeEEEEEeCCCeEEEEeCCCC------Cc----eeeeecCCCeEEEEE------cCCCCEEEEEe
Q 018806 220 WGPDGRYLASASYESSSFTIWDVAQG------LG----TPIRRGFGGLSILKW------SPTGDYFFAAK 273 (350)
Q Consensus 220 ~sp~g~~l~~~~~d~g~i~iwd~~~~------~~----~~~~~~~~~v~~~~~------sp~g~~l~~~~ 273 (350)
|.++|.-..+-..|+ .|..|++... +. .....-...+-.+.- .|+|+||++..
T Consensus 385 Fd~~G~aYTtlfidS-qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 385 FDGRGNAYTTLFIDS-QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp ECSSSEEEEEETTTT-EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ECCCCceEeeeeecc-eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999994444444675 9999998643 11 111112233333333 47888888764
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.83 E-value=8.9 Score=31.60 Aligned_cols=89 Identities=15% Similarity=0.098 Sum_probs=48.6
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCceec
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTSEP 290 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d-----~~v~iwd~~~~~~~~ 290 (350)
+++.++.++.+. ..+.+||..+.+...+.... .....+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 566667766431 26899999877544332211 11222222 66777777654 569999998876543
Q ss_pred cccCCC--CeEEEEEcCCCCEEEEEE
Q 018806 291 WSSTSG--FVTGATWDPEGRMILLAF 314 (350)
Q Consensus 291 ~~~~~~--~v~~~~~s~~g~~l~~~~ 314 (350)
+..... .-.+++. -+++.+++|+
T Consensus 246 ~~~~p~~r~~~~~~~-~~~~i~v~GG 270 (308)
T 1zgk_A 246 VAPMKHRRSALGITV-HQGRIYVLGG 270 (308)
T ss_dssp CCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred CCCCCCCccceEEEE-ECCEEEEEcC
Confidence 321111 1112222 2566766665
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.01 E-value=13 Score=32.67 Aligned_cols=215 Identities=11% Similarity=0.089 Sum_probs=121.4
Q ss_pred eeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCce
Q 018806 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 181 (350)
Q Consensus 102 V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~ 181 (350)
.-+.-.+|..+.||.-. ..++.|+|++. ...+.... ....|.-=+|-.+ + .++--++..|+-|++.....+..
T Consensus 68 AdsAIMnP~~~iiALra-g~~lQiFnle~--K~klks~~--~~e~VvfWkWis~-~-~l~lVT~taVyHWsi~~~s~P~k 140 (494)
T 1bpo_A 68 ADSAIMNPASKVIALKA-GKTLQIFNIEM--KSKMKAHT--MTDDVTFWKWISL-N-TVALVTDNAVYHWSMEGESQPVK 140 (494)
T ss_dssp CSEEEECSSSSCEEEEE-TTEEEEEETTT--TEEEEEEE--CSSCCCEEEEEET-T-EEEEECSSEEEEEESSSSCCCEE
T ss_pred cceeeeCCCCcEEEEec-CCeEEEEchHH--hhhhccee--cCCCceEEEecCC-C-eEEEEcCCeeEEecccCCCCchh
Confidence 44566788888888754 78999999965 33334332 2346777788765 3 44555678899999975555555
Q ss_pred eecccccc----cceecCCCCCceEEee------------------------eccCCCCCceeeEEECCCC-----CeEE
Q 018806 182 VRSGAASF----LGALSRGPGTRWTLVD------------------------FLRSQNGEQITALSWGPDG-----RYLA 228 (350)
Q Consensus 182 ~~~~~~~~----~~~~~~~~~~~~~~~~------------------------~~~~~~~~~v~~~~~sp~g-----~~l~ 228 (350)
+...+... +-....+.+.+|.++- .+.||. +.. ..+-.+| ..++
T Consensus 141 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGha-a~F--~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA-ASF--AQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSE-EEE--EEEECTTCSSEEEEEE
T ss_pred heecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeee-eee--EEEecCCCCCCceEEE
Confidence 54433222 2234556677776432 233332 111 1221222 2333
Q ss_pred EEEeC--CCeEEEEeCCCC---Cc---e---eee-ec---CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceeccc-
Q 018806 229 SASYE--SSSFTIWDVAQG---LG---T---PIR-RG---FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS- 292 (350)
Q Consensus 229 ~~~~d--~g~i~iwd~~~~---~~---~---~~~-~~---~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~- 292 (350)
.+... .+.+.+.++... .. . .+. .. .+-..++..++.-..+...+.-|.|++||++++.+....
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 34332 258999988543 11 0 011 11 234567888888788888899999999999999984322
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEEeCC
Q 018806 293 STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 327 (350)
Q Consensus 293 ~~~~~v~~~~~s~~g~~l~~~~~~~~~~~~~~~~~ 327 (350)
-....|..-+-+.+..-++.- +..+.+..+.+..
T Consensus 298 Is~~~iF~t~~~~~~~Gi~~V-nr~GqVl~v~v~e 331 (494)
T 1bpo_A 298 ISGETIFVTAPHEATAGIIGV-NRKGQVLSVCVEE 331 (494)
T ss_dssp CCSSCEEEEEEETTTTEEEEE-ETTCEEEEEEECT
T ss_pred ccCCceEEecccCCCCcEEEE-ccCceEEEEEEcc
Confidence 122334333333333333322 2445666666654
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.53 E-value=11 Score=31.16 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=37.0
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCceeeeecCCC-eEEEEEcCCCCEEEEEecC--------------CeEEEEeC
Q 018806 223 DGRYLASASYES----SSFTIWDVAQGLGTPIRRGFGG-LSILKWSPTGDYFFAAKFD--------------GTFYLWET 283 (350)
Q Consensus 223 ~g~~l~~~~~d~----g~i~iwd~~~~~~~~~~~~~~~-v~~~~~sp~g~~l~~~~~d--------------~~v~iwd~ 283 (350)
+++.++.++.+. ..+.+||..+.+...+.....+ ....+..-++++++.|+.+ ..+.+||+
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 285 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED 285 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEET
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeC
Confidence 567777776431 1578999988765443322111 1111112356666666543 35778888
Q ss_pred CCCcee
Q 018806 284 NTWTSE 289 (350)
Q Consensus 284 ~~~~~~ 289 (350)
.+.+-.
T Consensus 286 ~~~~W~ 291 (318)
T 2woz_A 286 DKKEWA 291 (318)
T ss_dssp TTTEEE
T ss_pred CCCEeh
Confidence 776543
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.30 E-value=12 Score=31.45 Aligned_cols=107 Identities=7% Similarity=-0.096 Sum_probs=48.4
Q ss_pred CCCeEEEEEeC-----CCeEEEEeC--CCCCceeeeec--CC-CeEEEEEcCCCCEEEEEecC-----------------
Q 018806 223 DGRYLASASYE-----SSSFTIWDV--AQGLGTPIRRG--FG-GLSILKWSPTGDYFFAAKFD----------------- 275 (350)
Q Consensus 223 ~g~~l~~~~~d-----~g~i~iwd~--~~~~~~~~~~~--~~-~v~~~~~sp~g~~l~~~~~d----------------- 275 (350)
+++.++.++.+ ...+.+||+ .+.+...+... .. .....+...++++++.|+.+
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 56666666532 126778887 44433322211 11 11212223366777777632
Q ss_pred -----CeEEEEeCCCCceeccccCC-CCeEEEEEcCCCCEEEEEE-CCC----eEEEEEEeCCCC
Q 018806 276 -----GTFYLWETNTWTSEPWSSTS-GFVTGATWDPEGRMILLAF-AGS----LTLGSIHFASKP 329 (350)
Q Consensus 276 -----~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~-~~~----~~~~~~~~~~~~ 329 (350)
..+.+||+.+.+-..+.... ......+...+++.+++|+ +.. ..++.+++..++
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp TCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred cccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 25789999877653322111 1111122334677777777 332 245555555443
No 340
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.12 E-value=13 Score=30.49 Aligned_cols=89 Identities=10% Similarity=0.087 Sum_probs=47.6
Q ss_pred CCCeEEEEEeC-C----CeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEec---------CCeEEEEeCCC
Q 018806 223 DGRYLASASYE-S----SSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKF---------DGTFYLWETNT 285 (350)
Q Consensus 223 ~g~~l~~~~~d-~----g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~---------d~~v~iwd~~~ 285 (350)
+++.++.++.+ . ..+.+||..+.+...+.... .....+. -++++++.|+. -..+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56777777654 1 26899999887654432211 1111222 26666666653 34589999988
Q ss_pred CceeccccCCC--CeEEEEEcCCCCEEEEEE
Q 018806 286 WTSEPWSSTSG--FVTGATWDPEGRMILLAF 314 (350)
Q Consensus 286 ~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~ 314 (350)
.+-..+..... .-.+++.. +++.+++|+
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CeEEECCCccchhhcceEEEE-CCEEEEEeC
Confidence 76543321111 11122222 566666664
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.56 E-value=14 Score=30.45 Aligned_cols=90 Identities=7% Similarity=-0.027 Sum_probs=48.9
Q ss_pred CCCCeEEEEEe-CC----CeEEEEeCCCCCceeeeecC---CCeEEEEEcCCCCEEEEEecCC-----eEEEEeCCCCce
Q 018806 222 PDGRYLASASY-ES----SSFTIWDVAQGLGTPIRRGF---GGLSILKWSPTGDYFFAAKFDG-----TFYLWETNTWTS 288 (350)
Q Consensus 222 p~g~~l~~~~~-d~----g~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~g~~l~~~~~d~-----~v~iwd~~~~~~ 288 (350)
-+++.++.++. ++ ..+.+||..+.+-..+.... .....+. -++++++.|+.++ .+.+||..+.+-
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 35667777765 21 26899999887544433211 1112222 2677777777654 688999988765
Q ss_pred eccccCC--CCeEEEEEcCCCCEEEEEE
Q 018806 289 EPWSSTS--GFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 289 ~~~~~~~--~~v~~~~~s~~g~~l~~~~ 314 (350)
..+.... ..-.+++ .-+++.+++|+
T Consensus 225 ~~~~~~p~~r~~~~~~-~~~~~l~v~GG 251 (315)
T 4asc_A 225 APFEAFPQERSSLSLV-SLVGTLYAIGG 251 (315)
T ss_dssp EEECCCSSCCBSCEEE-EETTEEEEEEE
T ss_pred EECCCCCCcccceeEE-EECCEEEEECC
Confidence 4332111 1111222 22567666665
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.71 E-value=39 Score=34.81 Aligned_cols=179 Identities=11% Similarity=0.123 Sum_probs=97.6
Q ss_pred eEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCcee
Q 018806 103 QGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASV 182 (350)
Q Consensus 103 ~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 182 (350)
-+.-.+|..+.||.- ...++.|+|++.+. ...... ....|.-=+|-.+ ..++--++..|+-|++.....+..+
T Consensus 69 dsAIMnP~~~iiALr-ag~~lQiFnl~~k~--klks~~--~~e~VvfWkWis~--~~l~lVT~~aVyHW~~~~~s~P~k~ 141 (1630)
T 1xi4_A 69 DSAIMNPASKVIALK-AGKTLQIFNIEMKS--KMKAHT--MTDDVTFWKWISL--NTVALVTDNAVYHWSMEGESQPVKM 141 (1630)
T ss_pred hhhccCCCcceEEEe-cCCeEEEeehHHhh--hhcccc--cCCCceEEEecCC--CeeEEEcCCeEEEeccCCCCccHHH
Confidence 344567888877765 37889999997532 223221 2345666677654 3445556678999999744444333
Q ss_pred ecccc----cccceecCCCCCceEEeee------------------------ccCCCCCceeeEEEC--CC-CCeEEEEE
Q 018806 183 RSGAA----SFLGALSRGPGTRWTLVDF------------------------LRSQNGEQITALSWG--PD-GRYLASAS 231 (350)
Q Consensus 183 ~~~~~----~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~v~~~~~s--p~-g~~l~~~~ 231 (350)
...+. ..+-....+++.+|.++-- +.||. +....+... +. ...++.+.
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha-~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA-ASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhH-hhhheeccCCCCCCceEEEEEE
Confidence 33221 1222344455666654322 22221 111111111 11 22333332
Q ss_pred e--CCCeEEEEeCCCC---Cce------eee-ec---CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee
Q 018806 232 Y--ESSSFTIWDVAQG---LGT------PIR-RG---FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 232 ~--d~g~i~iwd~~~~---~~~------~~~-~~---~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
. .+|.+.|.++... ... .+. .. ..-..++..++.-..+...+.-|.|++||+.++.+.
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 2 1258888888543 111 011 11 123446777777677888888999999999999874
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.90 E-value=4.3 Score=37.32 Aligned_cols=58 Identities=14% Similarity=0.230 Sum_probs=42.7
Q ss_pred eEEEEEcCCCCEEEEEecC------------CeEEEEeCCCCceeccc--cCCCCeEEEEEcCCCCEEEEEE
Q 018806 257 LSILKWSPTGDYFFAAKFD------------GTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d------------~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
.-.|+|+|.|.++++-..+ ..+.+.+..+++..++. .....++.++|+||++.|++..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4568999999966654322 24667777788876544 3457899999999999998874
No 344
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=82.22 E-value=23 Score=30.41 Aligned_cols=203 Identities=12% Similarity=0.110 Sum_probs=108.9
Q ss_pred CeeEEEEecCCCEEEEEEC---------------CCeEEEEEccCCCCCceeEecCC-----CCCCeeEEEEe---eC--
Q 018806 101 DLQGVSWHQHKHIVAFISG---------------STQVIVRDYEDSEGKDACILTSD-----SQRDVKVLEWR---PN-- 155 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~---------------d~~i~iw~~~~~~~~~~~~~~~~-----~~~~v~~~~~s---p~-- 155 (350)
.|..+...+.+++=+.=+. .-+|.+||+.+.+.+.+..+... ....+..+++. |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 5888888887764443111 12566788854311544444322 23457888887 21
Q ss_pred -CCeEEEEec--CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCC----CCeEE
Q 018806 156 -GGRSLSVGC--KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD----GRYLA 228 (350)
Q Consensus 156 -~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----g~~l~ 228 (350)
++.+++.+. ...+.|+|+..+.. ..+....+.+.....+.-++. .+.- ...+..++++|+ ++.|+
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~s-wRv~~~~~~pd~~~~~~i~G~-----~~~~--~~Gi~gIaLsp~~~~~~~~LY 239 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDS-WNVTHPTFKAERPTKFDYGGK-----EYEF--KAGIFGITLGDRDSEGNRPAY 239 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEE-EEEECGGGSCCSCEEEEETTE-----EEEE--CCCEEEEEECCCCTTSCCEEE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcE-EEEccCCCccccCcceEECCE-----EeEe--ccCceEEEecCCcCCCCeEEE
Confidence 134544444 47899999984433 233322221110000000011 0110 147899999998 88898
Q ss_pred EEEeCCCeEEEEeCCC-----C---CceeeeecCC---CeEEEEEc-CCCCEEEEEecCCeEEEEeCCC-C----ceecc
Q 018806 229 SASYESSSFTIWDVAQ-----G---LGTPIRRGFG---GLSILKWS-PTGDYFFAAKFDGTFYLWETNT-W----TSEPW 291 (350)
Q Consensus 229 ~~~~d~g~i~iwd~~~-----~---~~~~~~~~~~---~v~~~~~s-p~g~~l~~~~~d~~v~iwd~~~-~----~~~~~ 291 (350)
.....+ -++|.+.+ . ......+..+ .-..+++. .+|.++++--..+.|..|+..+ . ....+
T Consensus 240 f~plss--~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l 317 (381)
T 3q6k_A 240 YLAGSA--IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVV 317 (381)
T ss_dssp EEESSC--SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEE
T ss_pred EEECCC--CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEE
Confidence 887763 34444321 1 1122233332 33456775 6787777777788999999876 1 11222
Q ss_pred c--cCCCCeEEEEEcCCCCEEEEE
Q 018806 292 S--STSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 292 ~--~~~~~v~~~~~s~~g~~l~~~ 313 (350)
. ..-..+..+.+.++|.+.+.+
T Consensus 318 ~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 318 YTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EECTTCCSEEEEEECTTSCEEEEE
T ss_pred EECCCccccCeEEECCCCeEEEEE
Confidence 2 122356788888888765555
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=81.19 E-value=40 Score=34.72 Aligned_cols=169 Identities=6% Similarity=-0.005 Sum_probs=88.4
Q ss_pred ccCeeEEEEecCCCEEEEEE-------CCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEe--eCCCeEEEEecC----
Q 018806 99 EVDLQGVSWHQHKHIVAFIS-------GSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWR--PNGGRSLSVGCK---- 165 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~~~l~~~~~d---- 165 (350)
+..|..-..+++.+|++..+ -.|.+.+|..+.+ ......+|.+....+... +....+++.+..
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 55788888889999988654 3588889998532 233334665554444442 222344443332
Q ss_pred CcEEEEecCCC-CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCC
Q 018806 166 GGICIWAPSYP-GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQ 244 (350)
Q Consensus 166 ~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~ 244 (350)
++++|-++... .....+... ...+.+.+ ... ..-..++..|+.-..++..+.- |.|.+||+.+
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk----~~~~~~~~----------~~~-~Dfpv~~~vs~k~g~iy~itk~-G~~~~~d~~t 289 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKK----AVDVFFPP----------EAQ-NDFPVAMQISEKHDVVFLITKY-GYIHLYDLET 289 (1630)
T ss_pred ceEEEEecCCCccCCCCCccc----cccccCCc----------ccc-cCcceEEEeccccCEEEEEecC-ceEEEEeccc
Confidence 78888888643 111111000 00000000 001 1234567777776777777777 7999999999
Q ss_pred CCceeeeec-CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCc
Q 018806 245 GLGTPIRRG-FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT 287 (350)
Q Consensus 245 ~~~~~~~~~-~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~ 287 (350)
+.+.....- ...|...+-+....=+++....|.|.-..++...
T Consensus 290 ~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 290 GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred chhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 977643322 2333333323222223333345544444444333
No 346
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=80.78 E-value=8.2 Score=35.18 Aligned_cols=59 Identities=12% Similarity=0.207 Sum_probs=43.7
Q ss_pred CeEEEEEcCCCCEEEEEec------------CCeEEEEeCCCCceecccc--CCCCeEEEEEcCCCCEEEEEE
Q 018806 256 GLSILKWSPTGDYFFAAKF------------DGTFYLWETNTWTSEPWSS--TSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~~------------d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~ 314 (350)
....+.|.++|.+.++... ...|+.++..+++...+.. ....++.++|+||++.|+++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567999999987764321 2267788888888866553 245789999999999999885
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.75 E-value=5.9 Score=33.52 Aligned_cols=62 Identities=5% Similarity=-0.162 Sum_probs=37.1
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCceeeeecCCCe--------EEEEEc-----CCCCEEEEEecCCeEEEEeCCCC
Q 018806 223 DGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGL--------SILKWS-----PTGDYFFAAKFDGTFYLWETNTW 286 (350)
Q Consensus 223 ~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~~~~v--------~~~~~s-----p~g~~l~~~~~d~~v~iwd~~~~ 286 (350)
.+..+++++.+ |++...|+++|+........... .|.... -.+..|+.+..+..+.+.+ ++|
T Consensus 110 ~~g~Vy~Gs~~-g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG 184 (339)
T 2be1_A 110 EDEKVYTGSMR-TIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDG 184 (339)
T ss_dssp CCEEEEECEEE-EEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTS
T ss_pred cCCEEEEEecC-CEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCC
Confidence 35577888888 79999999999887655432211 111111 1245677777777777766 344
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=77.94 E-value=9.7 Score=32.21 Aligned_cols=61 Identities=8% Similarity=-0.009 Sum_probs=37.3
Q ss_pred EeCCCeEEEEeCCCCCceeeeec-----CCCeEE---EEE-c----CCCCEEEEEecCCeEEEEeCCCCceeccc
Q 018806 231 SYESSSFTIWDVAQGLGTPIRRG-----FGGLSI---LKW-S----PTGDYFFAAKFDGTFYLWETNTWTSEPWS 292 (350)
Q Consensus 231 ~~d~g~i~iwd~~~~~~~~~~~~-----~~~v~~---~~~-s----p~g~~l~~~~~d~~v~iwd~~~~~~~~~~ 292 (350)
+.| |.|..++..+|....-..- ..++.. ... . ..+..+++++.++.++..|+++|+.....
T Consensus 64 ~~d-G~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 64 FGD-GNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp STT-TEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred CCC-CEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 456 7999999887744321111 112221 001 0 14557889999999999999999985433
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=75.19 E-value=73 Score=32.09 Aligned_cols=100 Identities=9% Similarity=0.006 Sum_probs=60.6
Q ss_pred CceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee--eecCCCeEEEEEcCC------CCEEEEEec-CCeEEEEeC
Q 018806 213 EQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI--RRGFGGLSILKWSPT------GDYFFAAKF-DGTFYLWET 283 (350)
Q Consensus 213 ~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp~------g~~l~~~~~-d~~v~iwd~ 283 (350)
..|...+.+. .+++.++ . +.+.++.+..++.... ..-...|.|+++.|. ++++++|.. |++|+|+++
T Consensus 514 ~~I~~As~n~--~~vvva~-g-~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-G-RALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-T-TEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CEEEEEEeCC--CEEEEEE-C-CEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 3566666543 4666664 5 5888888776543322 223578999999863 468899986 999999999
Q ss_pred CCCceeccccC--CCCeEEEEEc--CCCCEEEEEECC
Q 018806 284 NTWTSEPWSST--SGFVTGATWD--PEGRMILLAFAG 316 (350)
Q Consensus 284 ~~~~~~~~~~~--~~~v~~~~~s--~~g~~l~~~~~~ 316 (350)
.+.+......- .....++.+. ....+|.++-.+
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 87665332211 2234444333 223456655533
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=74.37 E-value=8.4 Score=35.38 Aligned_cols=63 Identities=8% Similarity=0.111 Sum_probs=40.4
Q ss_pred CeeEEEEecCCCEEEEEECC----------CeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEe
Q 018806 101 DLQGVSWHQHKHIVAFISGS----------TQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVG 163 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 163 (350)
..-.|.|+|.|++++.-..+ +.-.+|-....+++....+.......++.++|+||++.|++.-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 35678999999977653322 2234555443445544444434567899999999988877653
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.15 E-value=23 Score=34.72 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 256 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 256 ~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
.+.+++..++..++++-+.|+++|+|++.++++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 466777788888999999999999999999876
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=71.99 E-value=68 Score=30.30 Aligned_cols=168 Identities=8% Similarity=-0.006 Sum_probs=91.0
Q ss_pred CccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEec-CC----CCCCeeEEEEeeCCCeEEEEecCCcEEEEe
Q 018806 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILT-SD----SQRDVKVLEWRPNGGRSLSVGCKGGICIWA 172 (350)
Q Consensus 98 ~~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~-~~----~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd 172 (350)
....|.++.-..+|++-+ |+ ++-+..++... ++...... .. ....|.++.-..+ +.+..++..+-+.++|
T Consensus 371 ~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g~lWigT~~~Gl~~~~ 445 (758)
T 3ott_A 371 SHNRIRHIYEDKEQQLWI-AT-DGSINRYDYAT--RQFIHYNIVDNTGTYNTNWTYYIFEDTA-GQLWISTCLGGIFVVD 445 (758)
T ss_dssp SCSCEEEEEECTTSCEEE-EE-TTEEEEEETTT--TEEEEEEEECCC--CBSSSEEEEEECTT-SEEEEEESSSCEEEEE
T ss_pred CCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCC--CcEEEeecCCCcCCCCCceEEEEEEcCC-CCEEEEECCCceEEEc
Confidence 345689998888887544 45 45688888743 32211110 11 1235777776666 4555566566678887
Q ss_pred cCCC--CCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceee
Q 018806 173 PSYP--GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI 250 (350)
Q Consensus 173 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~ 250 (350)
.... .....+... .......+-....|.++...++|+..+.++..+ -+..+|..+++...+
T Consensus 446 ~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~-Gl~~~d~~~~~~~~~ 508 (758)
T 3ott_A 446 KHKLMQSTSGQYIAE----------------QNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNK-GIDKINPRTREVTKL 508 (758)
T ss_dssp HHHHHHCCSSEEECS----------------EEECGGGTCSCSCEEEEEECTTSCEEEEETTCS-SEEEEETTTTEEEEE
T ss_pred cccccccCCcceecc----------------cccccccccccceeeeEEEcCCCCEEEEccCCC-CcEEEeCCCCceEEe
Confidence 5410 000000000 000001111123688898888888766333343 478889887655443
Q ss_pred eec----CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCcee
Q 018806 251 RRG----FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE 289 (350)
Q Consensus 251 ~~~----~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~ 289 (350)
... ...+.++....+|.+.+. +.+ -+..||..+++..
T Consensus 509 ~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 509 FADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQ 549 (758)
T ss_dssp CTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCC
T ss_pred cCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceE
Confidence 211 235778888888876654 344 4888887766543
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=70.10 E-value=44 Score=27.39 Aligned_cols=91 Identities=9% Similarity=0.069 Sum_probs=48.3
Q ss_pred CCCeEEEEEeCC------CeEEEEeCCCCCceeeeecCCCeE-EEEEcCCCCEEEEEec------CCeEEEEeCCCCcee
Q 018806 223 DGRYLASASYES------SSFTIWDVAQGLGTPIRRGFGGLS-ILKWSPTGDYFFAAKF------DGTFYLWETNTWTSE 289 (350)
Q Consensus 223 ~g~~l~~~~~d~------g~i~iwd~~~~~~~~~~~~~~~v~-~~~~sp~g~~l~~~~~------d~~v~iwd~~~~~~~ 289 (350)
+++.++.++.+. ..+.+||..+.+...+.....+.. ..+...++++++.|+. -..+.+||..+.+-.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 567777776541 158889998776544332221111 1111246776676654 236999999887654
Q ss_pred ccccC--CCCeEEEEEcCCCCEEEEEE
Q 018806 290 PWSST--SGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 290 ~~~~~--~~~v~~~~~s~~g~~l~~~~ 314 (350)
.+... ...-.+++. -+++.+++|+
T Consensus 189 ~~~~~p~~r~~~~~~~-~~~~iyv~GG 214 (318)
T 2woz_A 189 DLAPMKTPRSMFGVAI-HKGKIVIAGG 214 (318)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEEEE
T ss_pred ECCCCCCCcccceEEE-ECCEEEEEcC
Confidence 33211 111112222 2567777765
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.62 E-value=28 Score=31.83 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=42.7
Q ss_pred CceeeEEECCCCCeEEEEEeC-----------CCeEEEEeCCCCCceeeeec--CCCeEEEEEcCCCCEEEEEe
Q 018806 213 EQITALSWGPDGRYLASASYE-----------SSSFTIWDVAQGLGTPIRRG--FGGLSILKWSPTGDYFFAAK 273 (350)
Q Consensus 213 ~~v~~~~~sp~g~~l~~~~~d-----------~g~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~g~~l~~~~ 273 (350)
.....|.|.++|.+.+..... +..+..++..+++...+... ...++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 355689999999877643211 11677777777876665543 25689999999999987664
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=67.05 E-value=59 Score=27.70 Aligned_cols=99 Identities=10% Similarity=0.026 Sum_probs=48.7
Q ss_pred CceeeEEECCC-CCeEEEEEeCCCeEEEEeCCCCCceeeeec-------------CCCeEEEEEcCC-CCEEEEEecCCe
Q 018806 213 EQITALSWGPD-GRYLASASYESSSFTIWDVAQGLGTPIRRG-------------FGGLSILKWSPT-GDYFFAAKFDGT 277 (350)
Q Consensus 213 ~~v~~~~~sp~-g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~-------------~~~v~~~~~sp~-g~~l~~~~~d~~ 277 (350)
..+.+|.++|. ...|+.+... |.|...+-.......+... ...+.++.++|+ ...|..+... .
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~-g 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC-G 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-E
T ss_pred CceeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-e
Confidence 35788999884 4556666555 3454443222221221110 124788999986 3556666544 4
Q ss_pred EEEEeCCCCceecccc--CC---CCeEEEEEcCC-CCEEEEE
Q 018806 278 FYLWETNTWTSEPWSS--TS---GFVTGATWDPE-GRMILLA 313 (350)
Q Consensus 278 v~iwd~~~~~~~~~~~--~~---~~v~~~~~s~~-g~~l~~~ 313 (350)
|+..+-....-..+.. .. ..+..++++|. ...|.++
T Consensus 255 l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 255 IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 5554432222222221 11 34567888763 3344444
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.41 E-value=15 Score=36.82 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=27.1
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 257 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
+.+++..++..++++-+.|+++|||++.++++
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 44556667888999999999999999999876
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.23 E-value=86 Score=26.63 Aligned_cols=101 Identities=8% Similarity=-0.015 Sum_probs=52.1
Q ss_pred ceeeEEECCC--CCeEEEEEeCCCeEEEEeCCCCCceeeee-------------------cCCCeEEEEEcCC-CCEEEE
Q 018806 214 QITALSWGPD--GRYLASASYESSSFTIWDVAQGLGTPIRR-------------------GFGGLSILKWSPT-GDYFFA 271 (350)
Q Consensus 214 ~v~~~~~sp~--g~~l~~~~~d~g~i~iwd~~~~~~~~~~~-------------------~~~~v~~~~~sp~-g~~l~~ 271 (350)
.|.++++.|. ...|.+++.. +.|...+-.......+.. ....+.++.++|. ...|..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~-ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSP-QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEET-TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecC-CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 5778999872 4566666666 466554322222222211 1234778999883 344555
Q ss_pred EecCCeEEEEeCCCCce-ecccc--C-----------CCCeEEEEEcCC-CCEEEEEECC
Q 018806 272 AKFDGTFYLWETNTWTS-EPWSS--T-----------SGFVTGATWDPE-GRMILLAFAG 316 (350)
Q Consensus 272 ~~~d~~v~iwd~~~~~~-~~~~~--~-----------~~~v~~~~~s~~-g~~l~~~~~~ 316 (350)
+..++.|+..+- .++. ..+.. . ...+..++++|+ ...|+++..+
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 544554544322 2222 21110 0 124788999986 3556656543
No 358
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=53.78 E-value=1.9e+02 Score=29.17 Aligned_cols=188 Identities=5% Similarity=-0.090 Sum_probs=95.0
Q ss_pred ccCeeEEEEecC------CCEEEEEEC-CCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeC-C-CeEEEEecCCcEE
Q 018806 99 EVDLQGVSWHQH------KHIVAFISG-STQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPN-G-GRSLSVGCKGGIC 169 (350)
Q Consensus 99 ~~~V~~v~~sp~------g~~la~~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~-~~l~~~~~d~~v~ 169 (350)
..+|.|+++.|. ++++|.|.. |++++|+.++. .+.......+......++.+..- + .+++++-.||.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~--l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS--FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT--CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC--CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 347999999863 379999996 99999999963 33332221122234455554322 2 2455555688877
Q ss_pred EEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee
Q 018806 170 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP 249 (350)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~ 249 (350)
-+.++... ..+... ....-|. .++.=..+...|..-+.+..+. -..+|.-+ +. ..
T Consensus 631 ~~~~d~~t--g~l~d~------------------r~~~LG~--~pv~L~~~~~~~~~~V~a~s~r-p~liy~~~-~~-l~ 685 (1158)
T 3ei3_A 631 YFGLNIET--GLLSDR------------------KKVTLGT--QPTVLRTFRSLSTTNVFACSDR-PTVIYSSN-HK-LV 685 (1158)
T ss_dssp EEEECTTT--CCEEEE------------------EEEECCS--SCCEEEEEESSSCEEEEEESSS-CEEEEESS-SS-EE
T ss_pred EEEEcCCC--Cccccc------------------eeEEcCC--CceEEEEEeeCCceeEEEECCC-CEEEEEcC-Cc-eE
Confidence 66665211 011000 0112222 2333333333333322333332 33344333 22 22
Q ss_pred eee-cCCCe-EEEEEcCC--CCEEEEEecCCeEEEEeCCCCce--eccccCCCCeEEEEEcCCCCEEEEEE
Q 018806 250 IRR-GFGGL-SILKWSPT--GDYFFAAKFDGTFYLWETNTWTS--EPWSSTSGFVTGATWDPEGRMILLAF 314 (350)
Q Consensus 250 ~~~-~~~~v-~~~~~sp~--g~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~ 314 (350)
+.. ....+ ....|+.. ..-++..+ ++.++|..++.... .+...-...+..++++|+.+.+++++
T Consensus 686 ~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 686 FSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEE
T ss_pred EeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEE
Confidence 221 11233 34456532 12344443 45699988765332 22234456889999999988877664
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.42 E-value=96 Score=30.43 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=28.6
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCcee
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDAC 137 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~ 137 (350)
.+.++...++..++++-+.|+++|+|++.+ ++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t--~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST--NQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT--TEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC--CCeEe
Confidence 567788888999999999999999999954 54433
No 360
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.48 E-value=1.8e+02 Score=27.37 Aligned_cols=181 Identities=10% Similarity=0.068 Sum_probs=100.8
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCC
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 178 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~ 178 (350)
...|.++....+|. |-.|+.+| +..||... ..... ........|.++.. .+ +.+..++.+ .+..+|.....
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~--~~f~~-~~~~~~~~i~~i~~-~~-g~lWigt~~-Gl~~~~~~~~~- 132 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRA--DRYEQ-PETDFPTDVRTMAL-QG-DTLWLGALN-GLYTYQLQSRK- 132 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTE-EEEEETTT--TEECC-CSCCCCSCEEEEEE-ET-TEEEEEETT-EEEEEETTTCC-
T ss_pred CceEEEEEEcCCCc-EEEEeCCC-eEEEeCCC--CEEEC-cccCCCceEEEEEe-cC-CcEEEEcCC-cceeEeCCCCe-
Confidence 45688888887775 44556655 77888743 21111 11112234766654 45 455555544 67788865321
Q ss_pred CceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCceeeeec-----
Q 018806 179 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRG----- 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~~~~~----- 253 (350)
...+... ..+.....|.++....+|...+ ++.. -+..++..+++.......
T Consensus 133 ~~~~~~~---------------------~~~l~~~~i~~i~~d~~g~lWi-gt~~--Gl~~~~~~~~~~~~~~~~~~~~~ 188 (758)
T 3ott_A 133 LTSFDTR---------------------RNGLPNNTIYSIIRTKDNQIYV-GTYN--GLCRYIPSNGKFEGIPLPVHSSQ 188 (758)
T ss_dssp EEEECHH---------------------HHCCSCSCEEEEEECTTCCEEE-EETT--EEEEEETTTTEEEEECCCCCTTC
T ss_pred EEEeccC---------------------CCCcCCCeEEEEEEcCCCCEEE-EeCC--CHhhCccCCCceEEecCCCcccc
Confidence 1111000 0011124678888888777665 3333 577888776654332211
Q ss_pred -CCCeEEEEEcCCCCEEEEEecCCeEEEEeCCCCceecccc-CCCCeEEEEEcCCCCEEEEE
Q 018806 254 -FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-TSGFVTGATWDPEGRMILLA 313 (350)
Q Consensus 254 -~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~ 313 (350)
...|.++...+++..|-.|.. +-+..+|..+++...... ....|.++....+|.+.+.+
T Consensus 189 ~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 189 SNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp SSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred ccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe
Confidence 124778888777765444443 458889988776533221 13357888888888776643
No 361
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=44.69 E-value=2.1e+02 Score=27.00 Aligned_cols=196 Identities=11% Similarity=-0.009 Sum_probs=95.1
Q ss_pred eeEEE-EecCCCEEEEEE-----CCCeEEEEEccCCCCCceeEecCCC-CC------CeeEEEEeeCCCeEEEEec----
Q 018806 102 LQGVS-WHQHKHIVAFIS-----GSTQVIVRDYEDSEGKDACILTSDS-QR------DVKVLEWRPNGGRSLSVGC---- 164 (350)
Q Consensus 102 V~~v~-~sp~g~~la~~s-----~d~~i~iw~~~~~~~~~~~~~~~~~-~~------~v~~~~~sp~~~~l~~~~~---- 164 (350)
...++ ++|++++++.+- .-..++++|+.+ ++.+...+... +. ....++|..+ ..++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t--~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~ 207 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEK--KDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKN 207 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTT--TEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCc--CCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCC
Confidence 45566 889998888753 234788999864 33221111100 00 1144588754 55655432
Q ss_pred -------CCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCe-----EEEEEe
Q 018806 165 -------KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRY-----LASASY 232 (350)
Q Consensus 165 -------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~-----l~~~~~ 232 (350)
...|+.|.+.+......+ .+.+.......+...++++++ +++.+.
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~-----------------------v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 264 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKK-----------------------LFEVPKEYIYVSAGKLLSDTISSSLIFISANK 264 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEE-----------------------EEECCTTSCEEEEEESSCTTTCSSEEEEEEES
T ss_pred CcCcCCCCCEEEEEECCCChHHCeE-----------------------EeccCCCceEEEEEEecCCCceEEEEEEEEec
Confidence 145666666533221111 111111112234555666663 333321
Q ss_pred C--CCeEEEEeCCC--CCceeeeecCCCeEEEEEcCCCCEEEEE----------ecCCeEEEEeCCCCc--------eec
Q 018806 233 E--SSSFTIWDVAQ--GLGTPIRRGFGGLSILKWSPTGDYFFAA----------KFDGTFYLWETNTWT--------SEP 290 (350)
Q Consensus 233 d--~g~i~iwd~~~--~~~~~~~~~~~~v~~~~~sp~g~~l~~~----------~~d~~v~iwd~~~~~--------~~~ 290 (350)
+ ...+++.+... ++...+..... ..+..+.++.+++.. ...+.|.+.|+.++. ...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 265 DFYNYDNYILDTKYKNLKLQKINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp SSSCEEEEEEECSSSSCEEEECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred ccCceeEEEEcCCCCCCcceEeecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceE
Confidence 2 12566667654 32223322211 112344566555532 235678999987642 122
Q ss_pred cc--cCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEEeC
Q 018806 291 WS--STSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFA 326 (350)
Q Consensus 291 ~~--~~~~~v~~~~~s~~g~~l~~~~-~~~~~~~~~~~~ 326 (350)
+. .....+..+.|..+ ..+++.. ++...+..+++.
T Consensus 343 ~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 343 LFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLE 380 (711)
T ss_dssp EECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEE
T ss_pred EECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECC
Confidence 22 23446778888876 3444443 555566666553
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.53 E-value=2.2e+02 Score=26.77 Aligned_cols=91 Identities=9% Similarity=-0.053 Sum_probs=53.4
Q ss_pred CCeEEEEeCCCCC--------ceeeeec--CCCeEEEEEcCCCCEEEEEecCC--eEEEEeCCCCc--eec-cc-cCCCC
Q 018806 234 SSSFTIWDVAQGL--------GTPIRRG--FGGLSILKWSPTGDYFFAAKFDG--TFYLWETNTWT--SEP-WS-STSGF 297 (350)
Q Consensus 234 ~g~i~iwd~~~~~--------~~~~~~~--~~~v~~~~~sp~g~~l~~~~~d~--~v~iwd~~~~~--~~~-~~-~~~~~ 297 (350)
+|.|...|+.++. ...+..+ ...+..+.|..+ .++++...++ .|+++|+.+++ ... +. ...+.
T Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~ 397 (711)
T 4hvt_A 319 AGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA 397 (711)
T ss_dssp TTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTC
T ss_pred CCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeE
Confidence 3688899987642 2223333 345778888876 4666666676 57778877664 222 21 11345
Q ss_pred eEEEEEcCCCCEEEEEE-C--CCeEEEEEEe
Q 018806 298 VTGATWDPEGRMILLAF-A--GSLTLGSIHF 325 (350)
Q Consensus 298 v~~~~~s~~g~~l~~~~-~--~~~~~~~~~~ 325 (350)
+.....++++..+++.. + .-..++.+++
T Consensus 398 ~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 398 IFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp EEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 77777778876655543 2 2245555554
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=42.05 E-value=1.6e+02 Score=25.14 Aligned_cols=90 Identities=10% Similarity=0.137 Sum_probs=58.5
Q ss_pred eEEEEeCCCC--Cceeeee-------cCCCeEEEEEc---CC----CCEEEEEe-cCCeEEEEeCCCCceeccc-----c
Q 018806 236 SFTIWDVAQG--LGTPIRR-------GFGGLSILKWS---PT----GDYFFAAK-FDGTFYLWETNTWTSEPWS-----S 293 (350)
Q Consensus 236 ~i~iwd~~~~--~~~~~~~-------~~~~v~~~~~s---p~----g~~l~~~~-~d~~v~iwd~~~~~~~~~~-----~ 293 (350)
+|.+||+.+. +...... ....+..+++. |. +.++.... ....|-|+|+.+++..++. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6777777777 5543221 12456777777 22 33443333 3668999999988763221 1
Q ss_pred C--------------CCCeEEEEEcCC----CCEEEEEECCCeEEEEEEe
Q 018806 294 T--------------SGFVTGATWDPE----GRMILLAFAGSLTLGSIHF 325 (350)
Q Consensus 294 ~--------------~~~v~~~~~s~~----g~~l~~~~~~~~~~~~~~~ 325 (350)
. ...+..|+.+|+ ++.|+...-.+..++.+..
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T 253 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNT 253 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEH
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEH
Confidence 0 236889999998 8999998855567888873
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=41.65 E-value=1.5e+02 Score=24.60 Aligned_cols=200 Identities=7% Similarity=0.029 Sum_probs=98.4
Q ss_pred cCCCEEEEEECCCeEEEEEccCCCCCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecCCCCCCceeeccccc
Q 018806 109 QHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAAS 188 (350)
Q Consensus 109 p~g~~la~~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 188 (350)
|+...+++.+.+|.|+--.+..................+..+........++..+..|.++-+....-........+ .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G--~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG--Q 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC--E
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC--c
Confidence 46677888999999987765321000001111123345555555555578888888887665544310000000000 0
Q ss_pred ccceecCCCCCceEEeeeccCCCCCceeeE-EECC--CCCeEEEEEeCCCeEEEEeCCCC------Ccee-e-eecCCCe
Q 018806 189 FLGALSRGPGTRWTLVDFLRSQNGEQITAL-SWGP--DGRYLASASYESSSFTIWDVAQG------LGTP-I-RRGFGGL 257 (350)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp--~g~~l~~~~~d~g~i~iwd~~~~------~~~~-~-~~~~~~v 257 (350)
+.. ..+.-..+..|.++ .... ++.+++..+.. |.++...+..- .... + ....+.+
T Consensus 81 ~i~-------------~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~-G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~l 146 (323)
T 1wp5_A 81 HIA-------------NIIPIDRDEEIIKAIPINDFELNGYFLFVTRN-GMVKKTELKHYKAQRYSKPLTGINLKNDDQV 146 (323)
T ss_dssp EGG-------------GTSCCCTTCCEEEEEEESCTTSSCEEEEEETT-SEEEEEEGGGGCCSCCSSCEECSCCCTTCCE
T ss_pred Chh-------------hccCCCCCCEEEEEEEecccCCCceEEEEeCC-CeEEEeEHHHhhhccccCceEEEEeCCCCEE
Confidence 000 00110112344443 3332 25678888888 79998876421 1111 1 1123555
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCC----Cce------eccccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEEeC
Q 018806 258 SILKWSPTGDYFFAAKFDGTFYLWETNT----WTS------EPWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFA 326 (350)
Q Consensus 258 ~~~~~sp~g~~l~~~~~d~~v~iwd~~~----~~~------~~~~~~~~~v~~~~~s~~g~-~l~~~~~~~~~~~~~~~~ 326 (350)
..+........|+..+.+|.+..+.... +.. ..+ .....|.++..-+++. .|++.+.+. +.....+.
T Consensus 147 v~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~ll~vt~~G-~gKr~~~~ 224 (323)
T 1wp5_A 147 VDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL-KEGDYIVSGQLITSKDESIVVATQRG-AVKKMKLT 224 (323)
T ss_dssp EEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEECCTTCEEEEEETTS-EEEEEEGG
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe-CCCCEEEEEEEEcCCCcEEEEEECCC-ceEEEEHH
Confidence 5555555556788888889887776642 110 112 2334566664434444 555555433 33444443
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=41.49 E-value=1.4e+02 Score=24.13 Aligned_cols=166 Identities=11% Similarity=0.038 Sum_probs=88.5
Q ss_pred ccCeeEEEEec--CCCEEEEEECCCeEEEEEccCCC--CCceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecC
Q 018806 99 EVDLQGVSWHQ--HKHIVAFISGSTQVIVRDYEDSE--GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 99 ~~~V~~v~~sp--~g~~la~~s~d~~i~iw~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~ 174 (350)
+..|.++-. + +..+++.++.+|.++-..+.... ..-...+....+..+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 345665544 4 46789999999999988875421 011111111234556666655555678888888988877664
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC-------Cc
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG-------LG 247 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~-------~~ 247 (350)
.-.....-..+ .... .+.. +..|.++...+++..++..+.. |.++...+..- +.
T Consensus 146 eip~~gR~a~G---------------v~~i-~L~~--~d~vv~~~~~~~~~~ll~~T~~-G~~kr~~~~e~~~~~R~gkG 206 (276)
T 3no0_A 146 EVPPSTPGARG---------------VQGI-KLEK--NDETSGLRIWNGEPYLLVITAK-GRVKKISHEEIPKTNRGVKG 206 (276)
T ss_dssp GSCBCCTTCCC---------------EECC-CCCT--TCCEEEEEEESSCSEEEEEETT-SCEEEEEGGGSCCCCTTCCC
T ss_pred hCCCcCCCCCC---------------EEEE-ccCC--CCEEEEEEEeCCCCEEEEEeCC-CcEEEeEHHHcccCCCCCcc
Confidence 21110000000 0001 1222 2355555544556678888877 78888875421 11
Q ss_pred eeeeecCCCeEEEEEcCCCCEEEEEecCCeEEE--EeCC
Q 018806 248 TPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYL--WETN 284 (350)
Q Consensus 248 ~~~~~~~~~v~~~~~sp~g~~l~~~~~d~~v~i--wd~~ 284 (350)
.......+.+..+....+...++..+.+|.+.. ++..
T Consensus 207 v~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 207 TEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred eEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 111122344444433333445666677777666 6654
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.90 E-value=37 Score=31.94 Aligned_cols=30 Identities=13% Similarity=0.371 Sum_probs=24.5
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCCCce
Q 018806 257 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 288 (350)
Q Consensus 257 v~~~~~sp~g~~l~~~~~d~~v~iwd~~~~~~ 288 (350)
|.++.+ +..++++-+.|+++|+||++++++
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCce
Confidence 444444 577999999999999999999986
No 367
>2lyd_B Pacman protein; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=32.80 E-value=18 Score=18.37 Aligned_cols=8 Identities=50% Similarity=1.294 Sum_probs=5.5
Q ss_pred CCCCCCCC
Q 018806 1 MPSFPRPG 8 (350)
Q Consensus 1 ~~~~~~~~ 8 (350)
||.+|.|-
T Consensus 18 mp~lp~pp 25 (38)
T 2lyd_B 18 MPNLPKPP 25 (38)
T ss_dssp CCCCCCCC
T ss_pred ccCCCCCc
Confidence 67777764
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.28 E-value=46 Score=33.43 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=28.8
Q ss_pred ceeeEEECCCCCeEEEEEeCCCeEEEEeCCCCCcee
Q 018806 214 QITALSWGPDGRYLASASYESSSFTIWDVAQGLGTP 249 (350)
Q Consensus 214 ~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~~~~~ 249 (350)
.+.+++..++..++++-+.| +++++|++.++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D-~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLD-YKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTT-CEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCC-CEEEEEECCCCCeEE
Confidence 55666777888899999999 599999999987643
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=29.24 E-value=2.5e+02 Score=23.35 Aligned_cols=167 Identities=11% Similarity=0.048 Sum_probs=88.8
Q ss_pred CeeEEEEec---CCCEEEEEECCCeEEEEEccCCCCC---ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcEEEEecC
Q 018806 101 DLQGVSWHQ---HKHIVAFISGSTQVIVRDYEDSEGK---DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 174 (350)
Q Consensus 101 ~V~~v~~sp---~g~~la~~s~d~~i~iw~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~iwd~~ 174 (350)
.|.++..-+ +..++++++.+|.++--.+...... -...+.......+..+........++..+..|.+..+...
T Consensus 96 ~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~ 175 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSAT 175 (327)
T ss_dssp CEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECC
T ss_pred EEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECc
Confidence 455443333 5788999999999998887532211 1111111234556666655555788888888888777665
Q ss_pred CCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC-------Cc
Q 018806 175 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG-------LG 247 (350)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~-------~~ 247 (350)
.+.-+. ....+ . ..... .+. .+..|.++..-+++..++..+.. |.++.-.+..- +-
T Consensus 176 ~~eip~-~gr~a---~---------Gv~~i-~L~--~~d~Vv~~~~~~~~~~ll~~T~~-G~~Krt~l~e~~~~~R~~~G 238 (327)
T 3uc1_A 176 DEALRP-MGRAT---S---------GVQGM-RFN--IDDRLLSLNVVREGTYLLVATSG-GYAKRTAIEEYPVQGRGGKG 238 (327)
T ss_dssp TTTSCC-CCTTS---B---------CEESS-CCC--TTCCEEEEEECCTTCEEEEEETT-SEEEEEEGGGSCBCCTTSCC
T ss_pred ccccCc-CCcCC---C---------Ceeee-cCC--CCCEEEEEEEECCCCEEEEEeCC-CcEEEEEHHHccccCcCCCc
Confidence 111110 00000 0 00000 111 12466666665666788888888 79888765321 11
Q ss_pred ee-e--eecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCC
Q 018806 248 TP-I--RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETN 284 (350)
Q Consensus 248 ~~-~--~~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~ 284 (350)
.. + ....+.+..+....+...++..+.+|.+.-++..
T Consensus 239 ~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 239 VLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 11 1 1113345444444444566666777766666554
No 370
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.60 E-value=3.2e+02 Score=23.09 Aligned_cols=166 Identities=14% Similarity=0.211 Sum_probs=83.4
Q ss_pred ccCeeEEEEecCCCEEEEEECCCeEEEEEccCCCCC----------ceeEecCCCCCCeeEEEEeeCCCeEEEEecCCcE
Q 018806 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGK----------DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGI 168 (350)
Q Consensus 99 ~~~V~~v~~sp~g~~la~~s~d~~i~iw~~~~~~~~----------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v 168 (350)
...+..++++.-..+.+....||.|..|-.+.. ++ .+..+..-....|..++- -..+.++...+|.|
T Consensus 104 ~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~-GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v 180 (389)
T 3kci_A 104 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED-GKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDL 180 (389)
T ss_dssp TSCEEEEEECTTCSEEEEEETTSCEEEEECCGG-GTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCE
T ss_pred CCceeEEEECcCCCeEEEEcCCCCEEEEeCCCC-CcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeE
Confidence 445666777776677777788999999965321 11 111111111224555554 33566777788999
Q ss_pred EEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCCCeEEEEEeCCCeEEEEeCCCC-C-
Q 018806 169 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQG-L- 246 (350)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d~g~i~iwd~~~~-~- 246 (350)
+.|=....+....- ..........+.......|..++......+.++...+ |.|+.|-.... +
T Consensus 181 ~~wG~n~~GqLG~~--------------~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~-G~v~~wG~n~~GqL 245 (389)
T 3kci_A 181 YTWGKGRYGRLGHS--------------DSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVWSWGDGDYGKL 245 (389)
T ss_dssp EEEECCGGGTTCSS--------------SCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETT-TEEEEEECCGGGTT
T ss_pred EEeCCCCCCCcCCC--------------CCcccccceEecccCCCeEEEEEEcCCCcEEEEEccC-CEEEEEeCCCCCCC
Confidence 99975422211100 0000001111111122456677665433455555666 79999965421 1
Q ss_pred --------ceeee-ec--CCCeEEEEEcCCCCEEEEEecCCeEEEEeCC
Q 018806 247 --------GTPIR-RG--FGGLSILKWSPTGDYFFAAKFDGTFYLWETN 284 (350)
Q Consensus 247 --------~~~~~-~~--~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~ 284 (350)
..+.. .. ...+..++.. ..+.++-..+|.|+.|-..
T Consensus 246 G~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 246 GRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp SSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECC
T ss_pred CCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCC
Confidence 01111 11 1234444432 2344455678999999653
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=23.74 E-value=1.8e+02 Score=27.42 Aligned_cols=28 Identities=7% Similarity=0.208 Sum_probs=22.4
Q ss_pred CeeEEEEecCCCEEEEEECCCeEEEEEccC
Q 018806 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYED 130 (350)
Q Consensus 101 ~V~~v~~sp~g~~la~~s~d~~i~iw~~~~ 130 (350)
.|.++.+ +..+|++-+.|+++|+|++.+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCC
Confidence 4665554 467999999999999999964
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=21.58 E-value=3.2e+02 Score=21.96 Aligned_cols=174 Identities=10% Similarity=0.045 Sum_probs=94.2
Q ss_pred cccchhhhhhhhhhccccccCCCCcCCCCccCeeEEEEecCCCEEEEEECCCeEEE---EEccCCCCCceeEecCCCCCC
Q 018806 70 GEGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIV---RDYEDSEGKDACILTSDSQRD 146 (350)
Q Consensus 70 ~~~~~~~~~gh~~~~~~~~~~p~~~~~~~~~~V~~v~~sp~g~~la~~s~d~~i~i---w~~~~~~~~~~~~~~~~~~~~ 146 (350)
.+.|+....||.. .+..+..+.-.....+|+.-+..|.++- |++....... + ...+..
T Consensus 9 ~~Gwir~~~g~~~---------------~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~---l-l~~~e~ 69 (276)
T 3no0_A 9 QDGSIIPVEELPL---------------EKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS---L-KSREEK 69 (276)
T ss_dssp TTSEEEEGGGCCS---------------SCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC---C-SSTTCC
T ss_pred CCceeeeccCCCC---------------CCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc---c-CCCCCE
Confidence 3456666677731 3444555555445556666678887764 3332111111 2 234556
Q ss_pred eeEEEEee--CCCeEEEEecCCcEEEEecCCCCCCceeecccccccceecCCCCCceEEeeeccCCCCCceeeEEECCCC
Q 018806 147 VKVLEWRP--NGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG 224 (350)
Q Consensus 147 v~~~~~sp--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 224 (350)
|..+.- + +...++..+.+|.++...+..-. .. ..+ ...+.-..+..+..+......
T Consensus 70 i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~--~~G------------------~~~i~lkegD~l~~~~~~~~~ 127 (276)
T 3no0_A 70 IVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YK--AQG------------------MPIIKLTEGDEVVSIASSVDE 127 (276)
T ss_dssp EEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TC--STT------------------EECSCCCTTCCEEEEEECCSS
T ss_pred EEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hh--cCC------------------eEEEecCCCCEEEEEEEeCCC
Confidence 666644 3 34678888889999988875221 10 001 000110112345555555455
Q ss_pred CeEEEEEeCCCeEEEEeCCCC-------Cceeee--ecCCCeEEEEEcCCCCEEEEEecCCeEEEEeCCC
Q 018806 225 RYLASASYESSSFTIWDVAQG-------LGTPIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 285 (350)
Q Consensus 225 ~~l~~~~~d~g~i~iwd~~~~-------~~~~~~--~~~~~v~~~~~sp~g~~l~~~~~d~~v~iwd~~~ 285 (350)
..++..+.. |.+..+....- .-.... .....+..+...+++..++..+..|.++...+..
T Consensus 128 ~~ill~T~~-G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 128 THILLFTKK-GRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CEEEEEETT-SEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred CEEEEEECC-CEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 677777777 78877764321 111111 1234555555455667888888999888887643
Done!