BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018811
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/307 (62%), Positives = 235/307 (76%), Gaps = 4/307 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QL FY+ TCPNAS I+ +Q A SD RI ASLIRLHFHDCFVNGCD SILLD+
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG- 60
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
SI SEK + N NSARGF VVD +K ALE+ACPG+VSC+D+LA+ASE SV+L+GGPSW
Sbjct: 61 --SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
TV LGRRD TAN + A+ ++P+P ++L + +F+ VGLN N DLVALSGAHTFGRA+C
Sbjct: 119 TVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
F+ RLFNF+GTGNPDP CPQ G+ S +TNLDLSTPD FDN+YF+NL
Sbjct: 178 GVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANL 237
Query: 266 QANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIR 325
Q+N+GLLQSDQELFST G+ TI IV +F+SN+T FF++FA SMI MGN+S LTG+ GEIR
Sbjct: 238 QSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIR 297
Query: 326 SNCRRVN 332
+C++VN
Sbjct: 298 LDCKKVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/306 (63%), Positives = 229/306 (74%), Gaps = 4/306 (1%)
Query: 27 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAND 86
L FY TCPNAS ++ ++Q AF SD RI ASLIRLHFHDCFV GCD SILLDN
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSG-- 61
Query: 87 TSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWT 146
SI SEK + N NSARGF VVD +K ALE+ACPG+VSC D+LA+AS+ SV+LSGGPSWT
Sbjct: 62 -SIISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWT 120
Query: 147 VPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQ 206
V LGRRD TAN++ A+ ++P+P Q L + +F+ VGLN N DLVALSGAHTFGRA C
Sbjct: 121 VDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTN-DLVALSGAHTFGRATCG 179
Query: 207 FFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQ 266
FS RLFNF+G GNPDP CPQ G GS TNLDLSTPD FDN+YF+NLQ
Sbjct: 180 VFSNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQ 239
Query: 267 ANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRS 326
+NNGLLQSDQELFST G+ TI IV +F+SN+T FF++FA SMI MGN+S LTG+ GEIR
Sbjct: 240 SNNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRL 299
Query: 327 NCRRVN 332
+C++ N
Sbjct: 300 DCKKTN 305
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/312 (58%), Positives = 220/312 (70%), Gaps = 4/312 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNANNL 336
R NCR VN+N+L
Sbjct: 298 RLNCRVVNSNSL 309
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 219/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L ++DL TP FDN Y+ NL
Sbjct: 179 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 179 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 298 RLNCRVVNSN 307
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 359 bits (921), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 179 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 179 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 358 bits (918), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG H+FG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 298 RLNCRVVNSN 307
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 357 bits (917), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/309 (58%), Positives = 217/309 (70%), Gaps = 4/309 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNA 333
R NCR VN+
Sbjct: 298 RLNCRVVNS 306
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 357 bits (915), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 217/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHF DCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 179 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 217/310 (70%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 59
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 60 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 118
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 119 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 178
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+ RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 179 RSIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 238
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 298
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 299 RLNCRVVNSN 308
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/309 (57%), Positives = 216/309 (69%), Gaps = 4/309 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++RLHFHDCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVAL G HTFG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNA 333
R NCR VN+
Sbjct: 298 RLNCRVVNS 306
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 353 bits (906), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 216/310 (69%), Gaps = 4/310 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY+ +CPN SNI+ + N SD RI AS++ LHF DCFVNGCD SILLDN
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
TS +EK + N NSARGF V+D MKAA+ESACP VSCAD+L IA++QSV L+GGPSW
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD A LA+ NLP PF TL LK F NVGLN ++DLVALSG HTFG+ QC
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
+F RL+NF+ TG PDP CP GN S L + DL TP FDN Y+ NL
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 237
Query: 266 QANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
+ GL+QSDQELFS+P A DTIP+V +F+++ FF +F +M RMGN++ LTGTQG+I
Sbjct: 238 EEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 297
Query: 325 RSNCRRVNAN 334
R NCR VN+N
Sbjct: 298 RLNCRVVNSN 307
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/308 (60%), Positives = 219/308 (71%), Gaps = 4/308 (1%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QLTP FY TCPN I+ GV+ +A +D RI ASL+RLHFHDCFV GCDGS+LL+N
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNT-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
+I+SE+ ++ N NS RG +VV+ +K A+E++CP VSCADILAIA+E + L GGP W
Sbjct: 59 -DTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGW 117
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
VPLGRRD TANR+LA+QNLP PF L LK F GLN DLV LSG HTFGRA+C
Sbjct: 118 PVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN-TLDLVTLSGGHTFGRARC 176
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
F RL+NF+ TGNPDP CPQ G LTNLDLSTPD FDN Y+SNL
Sbjct: 177 STFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNL 236
Query: 266 QANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIR 325
NGLLQSDQELFSTPGADTIPIVN+FSSN+ FF +F VSMI+MGN+ +LTG +GEIR
Sbjct: 237 LQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIR 296
Query: 326 SNCRRVNA 333
C VN
Sbjct: 297 LQCNFVNG 304
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 207/309 (66%), Gaps = 12/309 (3%)
Query: 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAN 85
QL+PD Y +CPN I+ + A ++IR+ ASLIRLHFHDCFVNGCD S+LLD
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA-- 58
Query: 86 DTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSW 145
DSEK ++ N NSARGFEV+D +KAA+E+ACPG+VSCADIL +A+ SV LSGGP W
Sbjct: 59 ----DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGW 114
Query: 146 TVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 205
V LGR+DG AN++ A+ NLP+PF+ LD + +F V LN TD+VALSGAHTFG+A+C
Sbjct: 115 RVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNI-TDVVALSGAHTFGQAKC 172
Query: 206 QFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265
FS RLFNF G GNPD CP GGN ++ LD ST D FDN+YF NL
Sbjct: 173 AVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNL 232
Query: 266 QANNGLLQSDQELFSTPGA--DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGE 323
GLL SDQ LFS+ A T +V +S +++ FF F +MIRMGN+S G GE
Sbjct: 233 LEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGE 290
Query: 324 IRSNCRRVN 332
+R+NCR +N
Sbjct: 291 VRTNCRVIN 299
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 190/306 (62%), Gaps = 13/306 (4%)
Query: 27 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAND 86
L+ +FY T CPNA + I + +A + R+ ASL+RLHFHDCFV GCD S+LLD+ +N
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 87 TSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWT 146
T EK + N NS RGFEV+D +K+ +ES CPG+VSCADILA+A+ SV GG SW
Sbjct: 62 TG---EKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWN 118
Query: 147 VPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQ 206
V LGRRD TA+ S A+ +LP PF L L F+N G +LV LSGAHT G+AQC
Sbjct: 119 VLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCT 177
Query: 207 FFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQ 266
F R++N N DP CP G + L+ D++TP+ FDN Y+ NL+
Sbjct: 178 AFRTRIYN---ESNIDP----TYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLR 230
Query: 267 ANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRS 326
GLL SDQ+LF+ G T V +S+N F F +MI+MGNLS LTGT G+IR+
Sbjct: 231 NKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRT 288
Query: 327 NCRRVN 332
NCR+ N
Sbjct: 289 NCRKTN 294
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 181/305 (59%), Gaps = 8/305 (2%)
Query: 31 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSID 90
FYNT+CP A +++ + AF ++ I LIR+HFHDCFV GCD S+LLD+ AN+T+
Sbjct: 6 FYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTA-- 63
Query: 91 SEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLG 150
EK ++ NN S RGFEV+ A K+A+E+ACP VSCADILA A+ S NL+G ++ VP G
Sbjct: 64 -EKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSG 122
Query: 151 RRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQ 210
RRDG + S A+ +P+P L F N L + ++V LSGAH+ G A C F+
Sbjct: 123 RRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD-EMVTLSGAHSIGVAHCSSFTN 181
Query: 211 RLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGN--GSVLTNLDLSTPDGFDNDYFSNLQAN 268
RL+NFN DP CP + +LD+ TP DN Y++ +Q
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241
Query: 269 NGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 328
GLL SDQ L + A+ V + N TA+ FA +M++MG + +LTGTQGEIR+NC
Sbjct: 242 LGLLTSDQALVTE--ANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNC 299
Query: 329 RRVNA 333
VN+
Sbjct: 300 SVVNS 304
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 165/304 (54%), Gaps = 13/304 (4%)
Query: 27 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAND 86
L+ DFY TCP A +I+ +Q A DI + A L+RLHFHDCFV GCD S+LLD A
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 87 TSIDSEKFSMANNNSARGFEVVDAMKAALESACPG-IVSCADILAIASEQSVNLSGGPSW 145
++ SA F+ V+ ++ LE C G +VSC+DILA+A+ SV +SGGP +
Sbjct: 69 PGEQQAPPNLTLRPSA--FKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126
Query: 146 TVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQ 204
VPLGRRD R+ A+ +LP P + L D TDLV +SG HT G A
Sbjct: 127 RVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLA-LLGRLGLDATDLVTISGGHTIGLAH 185
Query: 205 CQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSN 264
C F RLF PDP CP G T LD+ TP+ FDN Y+ +
Sbjct: 186 CSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAKGTDR-RTVLDVRTPNVFDNKYYID 239
Query: 265 LQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEI 324
L GL SDQ+LF+ A T PIV F+ ++ FFE F VS+ +MG + + T QGE+
Sbjct: 240 LVNREGLFVSDQDLFTN--AITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEV 297
Query: 325 RSNC 328
R NC
Sbjct: 298 RRNC 301
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANR-----SLADQNLPTPFQTLDLLK 177
V+ AD+ +AS ++ +GGP + GR D + L D P+P Q L +
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHL---R 143
Query: 178 GRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXC 237
F +GLND ++VALSGAHT GR++ + +G G P+
Sbjct: 144 DVFYRMGLNDK-EIVALSGAHTLGRSRP--------DRSGWGKPE--------TKYTKDG 186
Query: 238 PQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNG----LLQSDQELFSTPGADTIPIVNNF 293
P G T L FDN YF +++ +L +D LF P +
Sbjct: 187 PGAPGGQSWTAQWLK----FDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKV--YAEKY 240
Query: 294 SSNETAFFESFAVSMIRMGNLSLLTG 319
+++ AFF+ +A + ++ NL G
Sbjct: 241 AADPEAFFKDYAEAHAKLSNLGAKFG 266
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 109/292 (37%), Gaps = 63/292 (21%)
Query: 32 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDC--FVNGCDGSILLDNVANDTSI 89
Y A + G F ++ R ++RL +H F G + + +
Sbjct: 23 YQKAVEKAKKKLRG-----FIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAEL 77
Query: 90 DSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPL 149
ANN +++ +KA I+S AD +A +V ++GGP
Sbjct: 78 AHS----ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHP 128
Query: 150 GRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFF 208
GR D + LP + D L+ F +GL D D+VALSG HT G A
Sbjct: 129 GRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH---- 180
Query: 209 SQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA- 267
+ F G +P FDN YF+ L +
Sbjct: 181 -KERSGFEGPWTSNPLI-------------------------------FDNSYFTELLSG 208
Query: 268 -NNGLLQ--SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
GLLQ SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 209 EKEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 109/292 (37%), Gaps = 63/292 (21%)
Query: 32 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDC--FVNGCDGSILLDNVANDTSI 89
Y A + G F ++ R ++RL +H F G + + +
Sbjct: 23 YQKAVEKAKKKLRG-----FIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAEL 77
Query: 90 DSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPL 149
ANN +++ +KA I+S AD +A +V ++GGP
Sbjct: 78 AHS----ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHP 128
Query: 150 GRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFF 208
GR D + LP + D L+ F +GL D D+VALSG HT G A
Sbjct: 129 GRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH---- 180
Query: 209 SQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA- 267
+ F G +P FDN YF+ L +
Sbjct: 181 -KERSGFEGPWTSNPLI-------------------------------FDNSYFTELLSG 208
Query: 268 -NNGLLQ--SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
GLLQ SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 209 EKEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 109/292 (37%), Gaps = 63/292 (21%)
Query: 32 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDC--FVNGCDGSILLDNVANDTSI 89
Y A + G F ++ R ++RL +H F G + + +
Sbjct: 23 YQKAVEKAKKKLRG-----FIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAEL 77
Query: 90 DSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPL 149
ANN +++ +KA I+S AD +A +V ++GGP
Sbjct: 78 AHS----ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHP 128
Query: 150 GRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFF 208
GR D + LP + D L+ F +GL D D+VALSG HT G A
Sbjct: 129 GRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH---- 180
Query: 209 SQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA- 267
+ F G +P FDN YF+ L +
Sbjct: 181 -KEASGFEGPWTSNPLI-------------------------------FDNSYFTELLSG 208
Query: 268 -NNGLLQ--SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
GLLQ SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 209 EKEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 109/292 (37%), Gaps = 63/292 (21%)
Query: 32 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDC--FVNGCDGSILLDNVANDTSI 89
Y A + G F ++ R ++RL +H F G + + +
Sbjct: 11 YQKAVEKAKKKLRG-----FIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAEL 65
Query: 90 DSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPL 149
ANN +++ +KA I+S AD +A +V ++GGP
Sbjct: 66 AHS----ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHP 116
Query: 150 GRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFF 208
GR D + LP + D L+ F +GL D D+VALSG HT G A
Sbjct: 117 GRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH---- 168
Query: 209 SQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA- 267
+ F G +P FDN YF+ L +
Sbjct: 169 -KERSGFEGPWTSNPLI-------------------------------FDNSYFTELLSG 196
Query: 268 -NNGLLQ--SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
GLLQ SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 197 EKEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 52/225 (23%)
Query: 97 ANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT 156
ANN +++ +KA I+S AD +A +V ++GGP GR D
Sbjct: 81 ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED--- 132
Query: 157 ANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNF 215
+ LP + D L+ F +GL D D+VALSG HT G A + F
Sbjct: 133 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGF 186
Query: 216 NGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ 273
G +P FDN YF+ L + GLLQ
Sbjct: 187 EGPWTSNPLI-------------------------------FDNSYFTELLSGEKEGLLQ 215
Query: 274 --SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 216 LPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLAD 163
G ++ + L++ P I+S AD +A +V ++GGP GR D +
Sbjct: 72 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPPE 127
Query: 164 QNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPD 222
LP + D L+ F +GL D D+VALSG HT G A + F G +
Sbjct: 128 GRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGFEGPWTSN 181
Query: 223 PXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ--SDQEL 278
P FDN YF+ L + GLLQ SD+ L
Sbjct: 182 PLI-------------------------------FDNSYFTELLSGEKEGLLQLPSDKAL 210
Query: 279 FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
S P P+V+ ++++E AFF +A + ++ L
Sbjct: 211 LSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLAD 163
G ++ + L++ P I+S AD +A +V ++GGP GR D +
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPPE 139
Query: 164 QNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPD 222
LP + D L+ F +GL D D+VALSG HT G A + F G +
Sbjct: 140 GRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGFEGPWTSN 193
Query: 223 PXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ--SDQEL 278
P FDN YF+ L + GLLQ SD+ L
Sbjct: 194 PLI-------------------------------FDNSYFTELLSGEKEGLLQLPSDKAL 222
Query: 279 FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
S P P+V+ ++++E AFF +A + ++ L
Sbjct: 223 LSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 48/216 (22%)
Query: 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLAD 163
G ++ + L++ P I+S AD +A +V ++GGP GR D +
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPPE 139
Query: 164 QNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPD 222
LP + D L+ F +GL D D+VALSG HT G A + F G +
Sbjct: 140 GRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGFEGPWTSN 193
Query: 223 PXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ--SDQEL 278
P FDN YF+ L + GLLQ SD+ L
Sbjct: 194 PLI-------------------------------FDNSYFTELLSGEKEGLLQLPSDKAL 222
Query: 279 FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNL 314
S P P+V+ ++++E AFF +A + ++ L
Sbjct: 223 LSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLAD 163
G ++ + L++ P I+S AD +A +V ++GGP GR D +
Sbjct: 72 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPPE 127
Query: 164 QNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPD 222
LP + D L+ F +GL D D+VALSG HT G A + F G +
Sbjct: 128 GRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGFEGPWTSN 181
Query: 223 PXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ--SDQEL 278
P FDN YF+ L + GLLQ SD+ L
Sbjct: 182 PLI-------------------------------FDNSYFTELLSGEKEGLLQLPSDKAL 210
Query: 279 FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
S P P+V+ ++++E AFF +A + ++ L
Sbjct: 211 LSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 52/225 (23%)
Query: 97 ANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT 156
ANN +++ +KA I+S AD +A +V ++GGP GR D
Sbjct: 69 ANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED--- 120
Query: 157 ANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNF 215
+ LP + D L+ F +GL D D+VALSG HT G A + F
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGF 174
Query: 216 NGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ 273
G +P FDN YF+ L + GLLQ
Sbjct: 175 EGPWTSNPLI-------------------------------FDNSYFTELLSGEKEGLLQ 203
Query: 274 --SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
SD+ L S P P+V+ ++++E AFF +A + ++ L
Sbjct: 204 LPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 48/218 (22%)
Query: 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLAD 163
G ++ + L++ P I+S AD +A +V ++GGP GR D +
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPPE 139
Query: 164 QNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPD 222
LP + D L+ F +GL D D+VALSG HT G A + F G +
Sbjct: 140 GRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAH-----KERSGFEGPWTSN 193
Query: 223 PXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA--NNGLLQ--SDQEL 278
P FDN YF+ L + GLLQ SD+ L
Sbjct: 194 PLI-------------------------------FDNSYFTELLSGEKEGLLQLPSDKAL 222
Query: 279 FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSL 316
S P P+V+ ++++E AFF +A + ++ L
Sbjct: 223 LSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 60/294 (20%)
Query: 32 YNTTCPNASNIILGVLQN--AFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSI 89
Y T P+ I + F ++ + ++RL +H D
Sbjct: 4 YPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSA--GTFDSKTKTGGPFGTIKH 61
Query: 90 DSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPL 149
+E ANN G ++ + ++ P IVS AD +A +V ++GGP
Sbjct: 62 QAELAHGANN----GLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFHP 116
Query: 150 GRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN-VGLNDNTDLVALSGAHTFGRAQCQFF 208
GR D + LP + D L+ F +GL+D D+VALSG HT G A
Sbjct: 117 GRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQ-DIVALSGGHTIGAAH---- 168
Query: 209 SQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGGNGSVLTNLDLSTPDGFDNDYFSNL--Q 266
+ F G +P FDN YF+ L
Sbjct: 169 -KERSGFEGPWTSNPLI-------------------------------FDNSYFTELLTG 196
Query: 267 ANNGLLQ--SDQELFSTPGADTI--PIVNNFSSNETAFFESFAVSMIRMGNLSL 316
+GLLQ SD+ L + D++ P+V ++++E FF +A + +++ L
Sbjct: 197 EKDGLLQLPSDKALLT----DSVFRPLVEKYAADEDVFFADYAEAHLKLSELGF 246
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 47 LQNAFNSDIRITASLIRLHFH-----DCFVNGCDGSILLDNVANDTSIDSEKFSMANNNS 101
+++ + + + SLIRL +H DCF DGS N S+ + + N
Sbjct: 16 IEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGS------PNSASMRFKPECLYAGN- 66
Query: 102 ARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSL 161
+G ++ L+ P I S AD+ +A+ ++ GGP+ GR D + +
Sbjct: 67 -KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 124
Query: 162 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQF 207
D LP +T ++ F +G ND + VAL GAHT G +F
Sbjct: 125 PDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGETHIEF 169
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 47 LQNAFNSDIRITASLIRLHFH-----DCFVNGCDGSILLDNVANDTSIDSEKFSMANNNS 101
+++ + + + SLIRL +H DCF DGS N S+ + + N
Sbjct: 15 IEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGS------PNSASMRFKPECLYAGN- 65
Query: 102 ARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSL 161
+G ++ L+ P I S AD+ +A+ ++ GGP+ GR D + +
Sbjct: 66 -KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 123
Query: 162 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQF 207
D LP +T ++ F +G ND + VAL GAHT G +F
Sbjct: 124 PDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECHIEF 168
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 47 LQNAFNSDIRITASLIRLHFH-----DCFVNGCDGSILLDNVANDTSIDSEKFSMANNNS 101
+++ + + + SLIRL +H DCF DGS N S+ + + N
Sbjct: 16 IEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGS------PNSASMRFKPECLYAGN- 66
Query: 102 ARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSL 161
+G ++ L+ P I S AD+ +A+ ++ GGP+ GR D + +
Sbjct: 67 -KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 124
Query: 162 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQF 207
D LP +T ++ F +G ND + VAL GAHT G +F
Sbjct: 125 PDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECHIEF 169
>pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
pdb|1QPA|B Chain B, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
Length = 345
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 123 VSCADILAIASEQSV-NLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFT 181
V+ D +A A V N G P LGR + A ++ D +P PF T+D + R
Sbjct: 104 VTPGDFIAFAGAVGVSNCPGAPQMQFFLGRPE---ATQAAPDGLVPEPFHTIDQVLARML 160
Query: 182 NVGLNDNTDLVALSGAHTFGRA 203
+ G D + V L AH+ A
Sbjct: 161 DAGGFDEIETVXLLSAHSIAAA 182
>pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LGA|B Chain B, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LLP|A Chain A, Lignin Peroxidase (isozyme H2) Pi 4.15
Length = 343
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 123 VSCADILAIASEQSV-NLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFT 181
V+ D +A A ++ N G P GR+ A + D +P PF T+D + R
Sbjct: 103 VTPGDFIAFAGAVALSNCPGAPQMNFFTGRK---PATQPAPDGLVPEPFHTVDQIIARVN 159
Query: 182 NVGLNDNTDLVALSGAHT 199
+ G D +LV + AH+
Sbjct: 160 DAGEFDELELVWMLSAHS 177
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VALSGAHT G+ +
Sbjct: 160 RLNMNDR-EVVALSGAHTLGKTHLK 183
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAHT G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHTLGKTHLK 183
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAHT G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHTLGKTHLK 183
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAHT G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHTLGKTHLK 183
>pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed
pdb|1B80|B Chain B, Rec. Lignin Peroxidase H8 Oxidatively Processed
Length = 351
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 123 VSCADILAIASEQSV-NLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFT 181
V+ D +A A ++ N G P GR A + D +P PF T+D + R
Sbjct: 110 VTPGDFIAFAGAVALSNCPGAPQMNFFTGRA---PATQPAPDGLVPEPFHTVDQIINRVN 166
Query: 182 NVGLNDNTDLVALSGAHT 199
+ G D +LV + AH+
Sbjct: 167 DAGEFDELELVXMLSAHS 184
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAHT G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHTLGKTHLK 183
>pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8
pdb|1B82|B Chain B, Pristine Recomb. Lignin Peroxidase H8
Length = 351
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 123 VSCADILAIASEQSV-NLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFT 181
V+ D +A A ++ N G P GR A + D +P PF T+D + R
Sbjct: 110 VTPGDFIAFAGAVALSNCPGAPQMNFFTGRA---PATQPAPDGLVPEPFHTVDQIINRVN 166
Query: 182 NVGLNDNTDLVALSGAHT 199
+ G D +LV + AH+
Sbjct: 167 DAGEFDELELVWMLSAHS 184
>pdb|1B85|A Chain A, Lignin Peroxidase
pdb|1B85|B Chain B, Lignin Peroxidase
Length = 351
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 123 VSCADILAIASEQSV-NLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFT 181
V+ D +A A ++ N G P GR A + D +P PF T+D + R
Sbjct: 110 VTPGDFIAFAGAVALSNCPGAPQMNFFTGRA---PATQPAPDGLVPEPFHTVDQIINRVN 166
Query: 182 NVGLNDNTDLVALSGAHT 199
+ G D +LV + AH+
Sbjct: 167 DAGEFDELELVFMLSAHS 184
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRAGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEWQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 101 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 158
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 159 RLNMNDR-EVVALMGAHALGKTHLK 182
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 101 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 158
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 159 RLNMNDR-EVVALMGAHALGKTHLK 182
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 95 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 152
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 153 RLNMNDR-EVVALMGAHALGKTHLK 176
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + D ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDADYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALKGAHALGKTHLK 180
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 39/198 (19%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGG 241
+ +ND ++VAL GAH G+ + PQG
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK-------------------------NSGYEGPQGA 190
Query: 242 NGSVLTN---LDLSTPDG-FDNDYFSNLQANNG----LLQSDQELFSTPGADTIPIVNNF 293
+V TN L+L D + + +N Q ++ +L +D L P + IV +
Sbjct: 191 ANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDP--KYLSIVKEY 248
Query: 294 SSNETAFFESFAVSMIRM 311
++++ FF+ F+ + ++
Sbjct: 249 ANDQDKFFKDFSKAFEKL 266
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 39/198 (19%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXXCPQGG 241
+ +ND ++VAL GAH G+ + PQG
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK-------------------------NSGYEGPQGA 195
Query: 242 NGSVLTN---LDLSTPDG-FDNDYFSNLQANNG----LLQSDQELFSTPGADTIPIVNNF 293
+V TN L+L D + + +N Q ++ +L +D L P + IV +
Sbjct: 196 ANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDP--KYLSIVKEY 253
Query: 294 SSNETAFFESFAVSMIRM 311
++++ FF+ F+ + ++
Sbjct: 254 ANDQDKFFKDFSKAFEKL 271
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ + +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTELK 180
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRAGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 162
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 163 RLNMNDR-EVVALMGAHALGKTHLK 186
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 157
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 158 RLNMNDR-EVVALMGAHALGKTHLK 181
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 157
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 158 RLNMNDR-EVVALMGAHALGKTHLK 181
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 162
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 163 RLNMNDR-EVVALMGAHALGKTHLK 186
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 162
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 163 RLNMNDR-EVVALMGAHALGKTHLK 186
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 161
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 162 RLNMNDR-EVVALMGAHALGKTHLK 185
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 162
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 163 RLNMNDR-EVVALMGAHALGKTHLK 186
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDADKDAGYVRTFFQ 156
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 157 RLNMNDR-EVVALMGAHALGKTHLK 180
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQ 204
P P + ++ F +G+ND + ++G H FG+
Sbjct: 261 PDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGKTH 298
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 123 VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFT 181
+S D+ ++ +V GP GR D T + D LP + ++ F
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD--TPEDTTPDNGRLPDMDKDAGYVRTFFQ 159
Query: 182 NVGLNDNTDLVALSGAHTFGRAQCQ 206
+ +ND ++VAL GAH G+ +
Sbjct: 160 RLNMNDR-EVVALMGAHALGKTHLK 183
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 167 PTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 202
P P ++ F + +ND + ++G HTFG+
Sbjct: 214 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,575,947
Number of Sequences: 62578
Number of extensions: 378445
Number of successful extensions: 898
Number of sequences better than 100.0: 115
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 127
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)