Query 018811
Match_columns 350
No_of_seqs 183 out of 1522
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 04:13:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018811.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018811hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-106 4E-111 781.3 25.2 298 24-332 22-324 (324)
2 cd00693 secretory_peroxidase H 100.0 4E-100 9E-105 734.3 24.8 298 26-331 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2E-71 4.3E-76 518.2 10.6 229 43-296 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1E-68 2.3E-73 511.6 21.2 232 41-329 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.1E-66 6.7E-71 488.9 20.2 233 38-317 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.2E-64 2.6E-69 476.7 20.1 231 30-317 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 1.5E-63 3.3E-68 483.7 22.5 239 39-335 16-290 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 2E-62 4.3E-67 461.2 19.9 221 40-317 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 7E-59 1.5E-63 439.1 18.4 224 42-313 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.5E-55 3.2E-60 434.6 19.3 259 41-322 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.2E-52 2.7E-57 437.2 19.3 256 41-319 55-405 (716)
12 PRK15061 catalase/hydroperoxid 100.0 2.2E-49 4.7E-54 410.9 19.3 259 41-322 57-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.4E-49 3E-54 374.2 11.9 232 27-313 14-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 2.1E-38 4.5E-43 301.9 17.0 221 45-315 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 5.7E-33 1.2E-37 290.2 17.4 221 42-316 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 1.2E-32 2.6E-37 286.4 17.9 222 45-316 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 2.7E-29 5.8E-34 251.1 16.0 252 42-315 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.2 6.9E-11 1.5E-15 119.8 11.5 217 45-315 452-725 (730)
19 PF07172 GRP: Glycine rich pro 72.7 2.4 5.2E-05 34.7 1.9 21 1-21 1-21 (95)
20 PF11895 DUF3415: Domain of un 60.6 8.6 0.00019 30.5 2.7 32 299-334 2-33 (80)
21 PTZ00411 transaldolase-like pr 53.0 1.1E+02 0.0024 30.5 9.8 79 103-188 148-231 (333)
22 COG3763 Uncharacterized protei 40.8 34 0.00075 26.5 3.1 29 42-70 24-52 (71)
23 PRK01844 hypothetical protein; 32.5 62 0.0014 25.3 3.4 29 42-70 24-52 (72)
24 PRK00523 hypothetical protein; 20.5 1.3E+02 0.0028 23.5 3.2 29 42-70 25-53 (72)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.7e-106 Score=781.34 Aligned_cols=298 Identities=46% Similarity=0.832 Sum_probs=283.3
Q ss_pred cCCCCcCcccCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCcceEecCCCCCCCCchhhccccCCCcch
Q 018811 24 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSAR 103 (350)
Q Consensus 24 ~~~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~ 103 (350)
.++|+++||++|||++|+||+++|++++.++++++|++|||+||||||+||||||||++ + ..||++++|. +++
T Consensus 22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~---~---~~Ek~a~~N~-~l~ 94 (324)
T PLN03030 22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDG---S---NTEKTALPNL-LLR 94 (324)
T ss_pred hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCC---C---cccccCCCCc-Ccc
Confidence 35799999999999999999999999999999999999999999999999999999986 3 3699999998 899
Q ss_pred hHHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHc
Q 018811 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNV 183 (350)
Q Consensus 104 g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~ 183 (350)
||++||.||++||+.||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++
T Consensus 95 Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~ 173 (324)
T PLN03030 95 GYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAK 173 (324)
T ss_pred hHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999877764 8999999999999999999
Q ss_pred CCCCcchhhhhccccccccccccccccccccCCCCC-CCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHH
Q 018811 184 GLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTG-NPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYF 262 (350)
Q Consensus 184 Gl~~~~d~VaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy 262 (350)
||+.+ |||+||||||||++||.+|.+|||||.|++ .+||+||+.|+..||+.||..++..+.+++|+.||.+|||+||
T Consensus 174 Gl~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy 252 (324)
T PLN03030 174 GLNTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFF 252 (324)
T ss_pred CCCHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHH
Confidence 99999 999999999999999999999999999874 5899999999999999999643333467899999999999999
Q ss_pred HHhhhcCcccccchhcccCCccChHHHHhhhccCh----HHHHHHHHHHHHHHhcCCCCCCCcCcccccccccc
Q 018811 263 SNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNE----TAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 332 (350)
Q Consensus 263 ~~l~~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn 332 (350)
+||++++|+|+|||+|++|+ +|+++|++||.|+ ++|+++|++||+|||+|+|+||.+|||||+|+.+|
T Consensus 253 ~nll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 253 SNLKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHHHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 99999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=4.2e-100 Score=734.34 Aligned_cols=298 Identities=55% Similarity=0.968 Sum_probs=287.2
Q ss_pred CCCcCcccCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCcceEecCCCCCCCCchhhccccCCCcchhH
Q 018811 26 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGF 105 (350)
Q Consensus 26 ~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~ 105 (350)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||++ +.++..|+++++|. +++||
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~---~~~~~~E~~~~~N~-~l~g~ 76 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDS---TANNTSEKDAPPNL-SLRGF 76 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecC---CCCCchhccCCCCC-Ccchh
Confidence 599999999999999999999999999999999999999999999999999999998 66677899999999 78999
Q ss_pred HHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHcCC
Q 018811 106 EVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGL 185 (350)
Q Consensus 106 ~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 185 (350)
++|+.||++||+.||++||||||||||+|+||+++|||.|+|++||+|+.++.+.++ ++||.|+.++++|++.|+++||
T Consensus 77 ~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~ 155 (298)
T cd00693 77 DVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGL 155 (298)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999998877665 7899999999999999999999
Q ss_pred CCcchhhhhccccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHh
Q 018811 186 NDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNL 265 (350)
Q Consensus 186 ~~~~d~VaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l 265 (350)
+++ |||+|+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.||..++....++||+.||.+|||+||++|
T Consensus 156 ~~~-d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l 234 (298)
T cd00693 156 TVT-DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNL 234 (298)
T ss_pred CHH-HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHH
Confidence 999 9999999999999999999999999999988999999999999999999765556678999999999999999999
Q ss_pred hhcCcccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCCCCCcCccccccccc
Q 018811 266 QANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRV 331 (350)
Q Consensus 266 ~~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~v 331 (350)
+.++|+|+|||+|+.|+ +|+++|++||.||+.|+++|+.||+||++|||+||.+||||++|+.|
T Consensus 235 ~~~~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 235 LAGRGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred HhcccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2e-71 Score=518.21 Aligned_cols=229 Identities=49% Similarity=0.871 Sum_probs=209.3
Q ss_pred HHHHHHHHHhcCccchhhhHHhhhccccc-cCCCcceEecCCCCCCCCchhhccccCCCcchhHHHHHHHHHHHHhhCCC
Q 018811 43 ILGVLQNAFNSDIRITASLIRLHFHDCFV-NGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPG 121 (350)
Q Consensus 43 V~~~v~~~~~~~~~~aa~lLRL~FHDcfv-~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~~Id~iK~~le~~cp~ 121 (350)
||++|++.+.++++++|+||||+|||||+ +|||||||+.. .|+++++|.++.+++++|+.||+++|++||+
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~~--------~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~ 72 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLFS--------AEKDAPPNRGLRDGFDVIDPIKAKLEAACPG 72 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGST--------TGGGSGGGTTHHHHHHHHHHHHHHHCHHSTT
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceeccc--------cccccccccCcceeeechhhHHhhhcccccC
Confidence 89999999999999999999999999999 99999999843 6999999995445999999999999999999
Q ss_pred CCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhhccccccc
Q 018811 122 IVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 201 (350)
Q Consensus 122 ~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaLsGaHTiG 201 (350)
+|||||||+||+|+||+.+|||.|+|++||+|+.++...++ .+||.|..++++|++.|+++||+++ |||||+||||||
T Consensus 73 ~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG 150 (230)
T PF00141_consen 73 VVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIG 150 (230)
T ss_dssp TS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGST
T ss_pred CCCHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccc
Confidence 99999999999999999999999999999999999998766 7899999999999999999999999 999999999999
Q ss_pred cccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHhhhcCcccccchhcccC
Q 018811 202 RAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFST 281 (350)
Q Consensus 202 ~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d 281 (350)
++||.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||++|++++|+|+||++|++|
T Consensus 151 ~~~c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d 217 (230)
T PF00141_consen 151 RAHCSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLND 217 (230)
T ss_dssp EESGGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHS
T ss_pred cceecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcC
Confidence 99999999 999 4 5799999999988 99 443333 77898 99999999999999999999999999999
Q ss_pred CccChHHHHhhhccC
Q 018811 282 PGADTIPIVNNFSSN 296 (350)
Q Consensus 282 ~~~~t~~~V~~yA~d 296 (350)
+ +|+++|++||+|
T Consensus 218 ~--~t~~~V~~yA~d 230 (230)
T PF00141_consen 218 P--ETRPIVERYAQD 230 (230)
T ss_dssp T--THHHHHHHHHHT
T ss_pred H--HHHHHHHHHhcC
Confidence 9 999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1e-68 Score=511.58 Aligned_cols=232 Identities=30% Similarity=0.475 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHhcCccchhhhHHhhhcccc-------ccCCCcceEecCCCCCCCCchhhccccCCCcchhHHHHHHHHH
Q 018811 41 NIILGVLQNAFNSDIRITASLIRLHFHDCF-------VNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKA 113 (350)
Q Consensus 41 ~iV~~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~~Id~iK~ 113 (350)
+.+++++ ..+.+++.++|.+|||+||||| ++||||||++. .|+++++|.++.+||++|+.||+
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~---------~E~~~~~N~gL~~g~~vid~iK~ 84 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE---------EEYSHGANNGLKIAIDLCEPVKA 84 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc---------cccCCccccchHHHHHHHHHHHH
Confidence 3556666 4477899999999999999999 89999999985 49999999944479999999999
Q ss_pred HHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCCcchhhh
Q 018811 114 ALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVA 193 (350)
Q Consensus 114 ~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~Va 193 (350)
++ ++|||||||+||||+||+.+|||.|+|++||+|++++++ +++||.|+.+++++++.|+++||+++ |||+
T Consensus 85 ~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~Va 155 (289)
T PLN02608 85 KH-----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDK-DIVA 155 (289)
T ss_pred Hc-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHH-HHhh
Confidence 87 489999999999999999999999999999999999864 56899999999999999999999999 9999
Q ss_pred hccccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHhhhc--Ccc
Q 018811 194 LSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQAN--NGL 271 (350)
Q Consensus 194 LsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl 271 (350)
|+||||||++||. |+ +|.| ++ ..||.+|||+||++|+.+ +|+
T Consensus 156 LsGAHTiG~ahc~----r~-g~~g-------------------------~~------~~Tp~~FDN~Yy~~ll~~~~~gl 199 (289)
T PLN02608 156 LSGGHTLGRAHPE----RS-GFDG-------------------------PW------TKEPLKFDNSYFVELLKGESEGL 199 (289)
T ss_pred hcccccccccccc----CC-CCCC-------------------------CC------CCCCCccChHHHHHHHcCCcCCc
Confidence 9999999999994 55 3322 01 168999999999999998 788
Q ss_pred --cccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCCCCCcCccccccc
Q 018811 272 --LQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCR 329 (350)
Q Consensus 272 --L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 329 (350)
|+|||+|+.|+ +|+++|+.||.||++|+++|+.||+||++|||+||++||+.+.-+
T Consensus 200 l~L~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 200 LKLPTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred cccccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 79999999999 999999999999999999999999999999999999999987654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.1e-66 Score=488.87 Aligned_cols=233 Identities=26% Similarity=0.415 Sum_probs=209.7
Q ss_pred hHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCcceEecCCCCCCCCchhhccccCCCcchhHHHHHHHHHHHHh
Q 018811 38 NASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALES 117 (350)
Q Consensus 38 ~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~~Id~iK~~le~ 117 (350)
..++||+++|++.+. +++++|++|||+|||||+ ||+|+++++..++..+.+|+++++|.++.+||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 999999999999999994 888887754212334457999999995559999999999987
Q ss_pred hCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhhccc
Q 018811 118 ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGA 197 (350)
Q Consensus 118 ~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaLsGa 197 (350)
| +||||||||||+|+||+.+|||.|+|++||+|+.++....++++||.|+.++++|++.|+++||+++ |||+|+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777778999999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHhhhcCc-------
Q 018811 198 HTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNG------- 270 (350)
Q Consensus 198 HTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g------- 270 (350)
||||++||.. ++|.|. |..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 115899999999999999999
Q ss_pred -ccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCC
Q 018811 271 -LLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLL 317 (350)
Q Consensus 271 -lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 317 (350)
+|+||++|+.|+ +|+.+|+.||.|+++|+++|++||+||++|||.
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999 999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.2e-64 Score=476.70 Aligned_cols=231 Identities=31% Similarity=0.533 Sum_probs=207.8
Q ss_pred CcccC--CCchHHHHHHHHHHHHHhcCccchhhhHHhhhc-----ccccc--CCCcceEecCCCCCCCCchhhccccCCC
Q 018811 30 DFYNT--TCPNASNIILGVLQNAFNSDIRITASLIRLHFH-----DCFVN--GCDGSILLDNVANDTSIDSEKFSMANNN 100 (350)
Q Consensus 30 ~fY~~--sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FH-----Dcfv~--GcDgSill~~~~~~~~~~~E~~~~~N~~ 100 (350)
+||.. -||.+++.++..+++.+ .+++++|.||||+|| ||+++ ||||||..+ .|+++++|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~---------~E~~~~~N~g 73 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFD---------AEQAHGANSG 73 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCcccccc---------ccccCCCccC
Confidence 56664 48899999999999988 788999999999999 88876 999998543 5999999996
Q ss_pred cchhHHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHH
Q 018811 101 SARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRF 180 (350)
Q Consensus 101 ~~~g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F 180 (350)
+.+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|
T Consensus 74 l~~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F 145 (250)
T PLN02364 74 IHIALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVF 145 (250)
T ss_pred HHHHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHH
Confidence 569999999999998 589999999999999999999999999999999999875 568999999999999999
Q ss_pred HH-cCCCCcchhhhhccccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCCh
Q 018811 181 TN-VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDN 259 (350)
Q Consensus 181 ~~-~Gl~~~~d~VaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN 259 (350)
++ +||+++ |||+|+||||||++|| +|+ +|.|. + ..||.+|||
T Consensus 146 ~~~~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~-------------------------~------~~tp~~fDn 188 (250)
T PLN02364 146 AKQMGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA-------------------------W------TSNPLIFDN 188 (250)
T ss_pred HHhcCCCHH-HheeeecceeeccccC----CCC-CCCCC-------------------------C------CCCCCccch
Confidence 97 699999 9999999999999999 454 33321 1 168999999
Q ss_pred HHHHHhhhc--Ccccc--cchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCC
Q 018811 260 DYFSNLQAN--NGLLQ--SDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLL 317 (350)
Q Consensus 260 ~Yy~~l~~~--~glL~--SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 317 (350)
+||++|+.+ +|+|. |||.|+.|+ +|+.+|+.||.|+++|+++|++||+||++||+-
T Consensus 189 ~Yy~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 189 SYFKELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999 89865 999999999 999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.5e-63 Score=483.71 Aligned_cols=239 Identities=30% Similarity=0.413 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHhcCcc---chhhhHHhhhccccc------------cCCCcceEecCCCCCCCCchhhccccCCCcch
Q 018811 39 ASNIILGVLQNAFNSDIR---ITASLIRLHFHDCFV------------NGCDGSILLDNVANDTSIDSEKFSMANNNSAR 103 (350)
Q Consensus 39 ~e~iV~~~v~~~~~~~~~---~aa~lLRL~FHDcfv------------~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~ 103 (350)
+|..|++.|++.+..+.. .|+.+|||+||||++ +|||||||++. ..|+++++|. +++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~-------~~E~~~~~N~-gL~ 87 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFD-------DIETAFHANI-GLD 87 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCC-------cccccCCCCC-CHH
Confidence 588999999999986554 567799999999996 79999999986 2699999998 555
Q ss_pred hHHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhh-cCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHH
Q 018811 104 GFEVVDAMKAALESACPGIVSCADILAIASEQSVNL-SGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTN 182 (350)
Q Consensus 104 g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 182 (350)
++|+.||..+|+.| ||||||||||+|+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 88 --~vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~ 159 (328)
T cd00692 88 --EIVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFAD 159 (328)
T ss_pred --HHHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHH
Confidence 89999999999998 99999999999999995 59999999999999999865 56899999999999999999
Q ss_pred cCCCCcchhhhhccccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHH
Q 018811 183 VGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYF 262 (350)
Q Consensus 183 ~Gl~~~~d~VaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy 262 (350)
+||+++ |||+|+||||||++|. +||+|+ ..++| .||.+|||+||
T Consensus 160 ~Gf~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf 203 (328)
T cd00692 160 AGFSPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFF 203 (328)
T ss_pred cCCCHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHH
Confidence 999999 9999999999999982 366664 14577 69999999999
Q ss_pred HHhh-hcCc-------------------ccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCCCCCcC
Q 018811 263 SNLQ-ANNG-------------------LLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQG 322 (350)
Q Consensus 263 ~~l~-~~~g-------------------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~G 322 (350)
+|++ .+++ +|+||++|+.|+ +|+.+|+.||.||++|+++|+.||+||++|||..
T Consensus 204 ~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~---- 277 (328)
T cd00692 204 IETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN---- 277 (328)
T ss_pred HHHHHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc----
Confidence 9987 4555 499999999999 9999999999999999999999999999999873
Q ss_pred ccccccccccCCC
Q 018811 323 EIRSNCRRVNANN 335 (350)
Q Consensus 323 eiR~~C~~vn~~~ 335 (350)
..+.+|+.|+..+
T Consensus 278 ~~l~dcs~v~p~~ 290 (328)
T cd00692 278 ISLTDCSDVIPPP 290 (328)
T ss_pred chhccCcccCCCC
Confidence 4788999999654
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=2e-62 Score=461.17 Aligned_cols=221 Identities=30% Similarity=0.513 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHhcCccchhhhHHhhhccccc-------cCCCcceEecCCCCCCCCchhhccccCCCcchhHHHHHHHH
Q 018811 40 SNIILGVLQNAFNSDIRITASLIRLHFHDCFV-------NGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMK 112 (350)
Q Consensus 40 e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~~Id~iK 112 (350)
.+-++..+.+.+ .+..++|.+|||+||||.+ +||||||.+. .|+++++|.++..++++|+.||
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~---------~E~~~~~N~gL~~~~~~i~~iK 86 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP---------QELAHDANNGLDIAVRLLDPIK 86 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh---------hhccCCCcCChHHHHHHHHHHH
Confidence 344577777776 4569999999999999974 7999999763 4999999996656999999999
Q ss_pred HHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCCcchhh
Q 018811 113 AALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLV 192 (350)
Q Consensus 113 ~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~V 192 (350)
+++ ++||||||||||+|+||+.+|||.|+|++||+|+..+.+ +++||.|+.++++|++.|+++||+++ |||
T Consensus 87 ~~~-----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlV 157 (251)
T PLN02879 87 ELF-----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDK-DIV 157 (251)
T ss_pred HHc-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHH-HHe
Confidence 998 589999999999999999999999999999999998854 57899999999999999999999999 999
Q ss_pred hhccccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHhhhc--Cc
Q 018811 193 ALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQAN--NG 270 (350)
Q Consensus 193 aLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~g 270 (350)
|||||||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|
T Consensus 158 ALsGaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~g 201 (251)
T PLN02879 158 ALSGGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEG 201 (251)
T ss_pred eeeccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCC
Confidence 99999999999995 4 344321 12 58999999999999999 88
Q ss_pred c--cccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCCCC
Q 018811 271 L--LQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLL 317 (350)
Q Consensus 271 l--L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 317 (350)
+ |+||++|+.|| +|+++|++||.||.+||++|+.||+||++||+.
T Consensus 202 ll~L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 202 LLQLPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred CccchhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 8 67999999999 999999999999999999999999999999974
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=7e-59 Score=439.06 Aligned_cols=224 Identities=34% Similarity=0.524 Sum_probs=206.0
Q ss_pred HHHHHHHHHHhcCccchhhhHHhhhcccccc--------CCCcceEecCCCCCCCCchhhccccCCCcchhHHHHHHHHH
Q 018811 42 IILGVLQNAFNSDIRITASLIRLHFHDCFVN--------GCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKA 113 (350)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~--------GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~~Id~iK~ 113 (350)
.|++.|++.+.+++.+++++|||+|||||++ ||||||+++. |+++++|.++.+++++|+.||+
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~---------e~~~~~N~~l~~~~~~l~~ik~ 72 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP---------ELDRPENGGLDKALRALEPIKS 72 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc---------cccCcccccHHHHHHHHHHHHH
Confidence 5889999999999999999999999999997 9999999964 9999999976799999999999
Q ss_pred HHHhhCCCCCchHHHHHHhhhhHhhhc--CCCceeecCCCCCCCCCc--cccccCCCCCCCCCHHHHHHHHHHcCCCCcc
Q 018811 114 ALESACPGIVSCADILAIASEQSVNLS--GGPSWTVPLGRRDGRTAN--RSLADQNLPTPFQTLDLLKGRFTNVGLNDNT 189 (350)
Q Consensus 114 ~le~~cp~~VScADilalAar~AV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~ 189 (350)
++|. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+.+.+|.|..+++++++.|.++||+++
T Consensus 73 ~~~~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~- 149 (255)
T cd00314 73 AYDG--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS- 149 (255)
T ss_pred HcCC--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-
Confidence 9998 899999999999999999999 999999999999999764 223356788888999999999999999999
Q ss_pred hhhhhc-ccccc-ccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCCChHHHHHhhh
Q 018811 190 DLVALS-GAHTF-GRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQA 267 (350)
Q Consensus 190 d~VaLs-GaHTi-G~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~ 267 (350)
|||||+ ||||| |++||..|..|+ | .+|+.||.+|||+||++|+.
T Consensus 150 e~VAL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~ 195 (255)
T cd00314 150 ELVALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLD 195 (255)
T ss_pred HHHhhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhc
Confidence 999999 99999 999998877664 1 13457999999999999999
Q ss_pred cC----------------cccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhc
Q 018811 268 NN----------------GLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGN 313 (350)
Q Consensus 268 ~~----------------glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 313 (350)
++ ++|+||++|+.|+ +|+.+|+.||.|+++|+++|++||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 196 MNWEWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCcccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 88 8999999999999 99999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.5e-55 Score=434.60 Aligned_cols=259 Identities=20% Similarity=0.310 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHhcC--------ccchhhhHHhhhccccc-------cCCC-cceEecCCCCCCCCchhhccccCCCcchh
Q 018811 41 NIILGVLQNAFNSD--------IRITASLIRLHFHDCFV-------NGCD-GSILLDNVANDTSIDSEKFSMANNNSARG 104 (350)
Q Consensus 41 ~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~~~~E~~~~~N~~~~~g 104 (350)
+.|++.|++.+... ...+|.+|||+|||+.+ +|++ |+|.+. +|++++.|.++.++
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~---------pe~~~~~N~gL~~a 115 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA---------PLNSWPDNVNLDKA 115 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc---------cccCcHhhhhHHHH
Confidence 68899999998864 37999999999999986 5876 676654 59999999988889
Q ss_pred HHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccc------------------------
Q 018811 105 FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRS------------------------ 160 (350)
Q Consensus 105 ~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~------------------------ 160 (350)
+.+++.||+++ |..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 116 ~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~p 191 (409)
T cd00649 116 RRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENP 191 (409)
T ss_pred HHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccc
Confidence 99999999988 44799999999999999999999999999999999754320
Q ss_pred -------------cccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhh-ccccccccccccccccccccCCCCCCCCCCcc
Q 018811 161 -------------LADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVAL-SGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 226 (350)
Q Consensus 161 -------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaL-sGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d 226 (350)
+....||+|..++++|++.|.+|||+++ ||||| +||||||++||.+|.+||. +||.++
T Consensus 192 l~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~ 263 (409)
T cd00649 192 LAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHVG-------PEPEAA 263 (409)
T ss_pred hhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccCC-------CCCCcC
Confidence 1122699999999999999999999999 99999 5999999999999999982 699999
Q ss_pred HHHHHHHH--hcCCCCCC-CCcccccC---CCCCCCCChHHHHHhhh---------------------------------
Q 018811 227 ATLLAQLQ--QLCPQGGN-GSVLTNLD---LSTPDGFDNDYFSNLQA--------------------------------- 267 (350)
Q Consensus 227 ~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~Tp~~FDN~Yy~~l~~--------------------------------- 267 (350)
+.|++.|+ +.||...+ +...+.+| +.||.+|||+||++|+.
T Consensus 264 ~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~ 343 (409)
T cd00649 264 PIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPS 343 (409)
T ss_pred HHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccc
Confidence 99999995 89997533 33455788 57999999999999998
Q ss_pred ---cCcccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHH--hcCCCCCCCcC
Q 018811 268 ---NNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRM--GNLSLLTGTQG 322 (350)
Q Consensus 268 ---~~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 322 (350)
+.|||+||++|+.|| +|+++|++||.|+++||++|++||+|| +.+|+++...|
T Consensus 344 ~~~~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 344 KKHAPMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccCcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999 999999999999999999999999999 69999887655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.2e-52 Score=437.15 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHhcC--------ccchhhhHHhhhccccc-------cCCC-cceEecCCCCCCCCchhhccccCCCcchh
Q 018811 41 NIILGVLQNAFNSD--------IRITASLIRLHFHDCFV-------NGCD-GSILLDNVANDTSIDSEKFSMANNNSARG 104 (350)
Q Consensus 41 ~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~~~~E~~~~~N~~~~~g 104 (350)
+.|++.|++.+... ...+|.+|||+||++.+ +||+ |+|.+. +|++++.|.++.++
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~---------P~~sw~~N~~Ldka 125 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA---------PLNSWPDNVNLDKA 125 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc---------cccCchhhhhHHHH
Confidence 46899999998864 36999999999999987 5774 666554 59999999988889
Q ss_pred HHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCcc-------------------------
Q 018811 105 FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANR------------------------- 159 (350)
Q Consensus 105 ~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~------------------------- 159 (350)
+.+++.||+ +||++|||||||+||+++||+.+|||.|+|.+||+|+..+..
T Consensus 126 ~~lL~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~ 201 (716)
T TIGR00198 126 RRLLWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPL 201 (716)
T ss_pred HHHHHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccc
Confidence 999999988 578999999999999999999999999999999999943220
Q ss_pred -c----------cccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhhc-cccccccccccccccccccCCCCCCCCCCccH
Q 018811 160 -S----------LADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNA 227 (350)
Q Consensus 160 -~----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~ 227 (350)
. +....+|.|..++.+|++.|.+||||++ |||||+ ||||||++||.+|.+|| ++||++++
T Consensus 202 a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~ 273 (716)
T TIGR00198 202 AATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAP 273 (716)
T ss_pred hhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC-------CCCCCcCH
Confidence 0 1122699999999999999999999999 999995 99999999999999998 27999999
Q ss_pred HHHHHHHhcCCCCC---CCCcccccC---CCCCCCCChHHHHHhhhc---------------------------------
Q 018811 228 TLLAQLQQLCPQGG---NGSVLTNLD---LSTPDGFDNDYFSNLQAN--------------------------------- 268 (350)
Q Consensus 228 ~~~~~L~~~Cp~~~---~~~~~~~lD---~~Tp~~FDN~Yy~~l~~~--------------------------------- 268 (350)
.|++.|+..||... .+...+.+| +.||.+|||+||+||+..
T Consensus 274 ~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~ 353 (716)
T TIGR00198 274 IEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKH 353 (716)
T ss_pred HHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccccccccc
Confidence 99999999998532 223356677 579999999999999974
Q ss_pred -CcccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHh--cCCCCCC
Q 018811 269 -NGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMG--NLSLLTG 319 (350)
Q Consensus 269 -~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg 319 (350)
+++|+||++|..|| +|+++|+.||.|+++|+++|++||+||+ .+|++..
T Consensus 354 ~~~mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 354 NPIMLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred ccCccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 68999999999999 9999999999999999999999999999 5665543
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.2e-49 Score=410.88 Aligned_cols=259 Identities=21% Similarity=0.314 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHhcC--------ccchhhhHHhhhccccc-------cCCC-cceEecCCCCCCCCchhhccccCCCcchh
Q 018811 41 NIILGVLQNAFNSD--------IRITASLIRLHFHDCFV-------NGCD-GSILLDNVANDTSIDSEKFSMANNNSARG 104 (350)
Q Consensus 41 ~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~~~~E~~~~~N~~~~~g 104 (350)
+.|++.|.+.+... ...+|.+|||+||++.+ +||+ |+|.+ .+|++++.|.++.++
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf---------~pe~~w~~N~gL~ka 127 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF---------APLNSWPDNVNLDKA 127 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC---------cccccchhhhhHHHH
Confidence 57899999998864 37999999999999997 5775 66655 459999999988899
Q ss_pred HHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccc------------------------
Q 018811 105 FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRS------------------------ 160 (350)
Q Consensus 105 ~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~------------------------ 160 (350)
+.+++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 128 ~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~ 203 (726)
T PRK15061 128 RRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLEN 203 (726)
T ss_pred HHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccccccccccccccccc
Confidence 99999999988 45799999999999999999999999999999998654321
Q ss_pred --------------cccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhhc-cccccccccccccccccccCCCCCCCCCCc
Q 018811 161 --------------LADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGNPDPTL 225 (350)
Q Consensus 161 --------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~ 225 (350)
+-...+|+|..++.+|++.|.+|||+++ |||||+ ||||||++||..|.+|| ++||.+
T Consensus 204 pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl-------gpdP~~ 275 (726)
T PRK15061 204 PLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV-------GPEPEA 275 (726)
T ss_pred chhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc-------CCCCCc
Confidence 0012389999999999999999999999 999995 99999999999999998 369999
Q ss_pred cHHHHHHHH--hcCCCCCC-CCcccccC---CCCCCCCChHHHHHhhhc-------------------------------
Q 018811 226 NATLLAQLQ--QLCPQGGN-GSVLTNLD---LSTPDGFDNDYFSNLQAN------------------------------- 268 (350)
Q Consensus 226 d~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~Tp~~FDN~Yy~~l~~~------------------------------- 268 (350)
++.|++.|. +.||.+.+ +..+..+| ..||.+|||+||++|+.+
T Consensus 276 a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~ 355 (726)
T PRK15061 276 APIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDP 355 (726)
T ss_pred CHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCccccc
Confidence 999999985 89997433 33455677 579999999999999985
Q ss_pred -----CcccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHh--cCCCCCCCcC
Q 018811 269 -----NGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMG--NLSLLTGTQG 322 (350)
Q Consensus 269 -----~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 322 (350)
.+||+||++|..|| +|+++|++||.|+++|+++|++||.||+ .+|+++..-|
T Consensus 356 ~~~~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 356 SKKHAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999 9999999999999999999999999995 5776554433
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.4e-49 Score=374.22 Aligned_cols=232 Identities=24% Similarity=0.307 Sum_probs=184.3
Q ss_pred CCcCcccCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhcccc-------ccCCCcceEecCCCCCCCCchhhc-cccC
Q 018811 27 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCF-------VNGCDGSILLDNVANDTSIDSEKF-SMAN 98 (350)
Q Consensus 27 l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~~~~E~~-~~~N 98 (350)
++.+||... .-+.|...-..+...++++++.||||+||||| ++||||||+++. . .+|+. ...|
T Consensus 14 ~~~g~~~~~---f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~---~---~~En~G~~~n 84 (264)
T cd08201 14 LQSGYSARG---FVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYEL---D---RPENIGSGFN 84 (264)
T ss_pred hcccceecc---cccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecC---C---ChhhccCchh
Confidence 445566542 22334444444566889999999999999999 889999999975 2 46877 3445
Q ss_pred CCcchhHHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccccccCCCCCCCCCHHHHHH
Q 018811 99 NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKG 178 (350)
Q Consensus 99 ~~~~~g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~ 178 (350)
. ++++|+.|+.+ +||||||||||+|+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++
T Consensus 85 ~-~l~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~ 149 (264)
T cd08201 85 T-TLNFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTE 149 (264)
T ss_pred h-ccccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHH
Confidence 4 67888877543 699999999999999999999999999999999988753 39999999999999
Q ss_pred HHHHcCCCCcchhhhhcc-ccccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCCCCC
Q 018811 179 RFTNVGLNDNTDLVALSG-AHTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTPDGF 257 (350)
Q Consensus 179 ~F~~~Gl~~~~d~VaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~F 257 (350)
.|+++||+++ |||+||| |||||++||..|.+++- |.. ..+...++| .||.+|
T Consensus 150 ~Fa~~Gfs~~-DmVaLsggaHTiG~ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~F 202 (264)
T cd08201 150 SFRRQGFSTS-EMIALVACGHTLGGVHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQF 202 (264)
T ss_pred HHHHcCCChH-HHheeecCCeeeeecccccchhhcC---------Ccc----------------ccCCCCCCC-CCcccc
Confidence 9999999999 9999996 99999999998887642 100 001234566 699999
Q ss_pred ChHHHHHhhhcCc----------ccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhc
Q 018811 258 DNDYFSNLQANNG----------LLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGN 313 (350)
Q Consensus 258 DN~Yy~~l~~~~g----------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 313 (350)
||+||.+++.+.. -+.||..++...++.| ++..| ++..|.+.++..|.||.+
T Consensus 203 Dn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t---~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 203 DNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT---MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred chHHHHHHhcCCCCCceeecCCCCccchhhheecCccHH---HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 9999999998742 3679999998664344 34456 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=2.1e-38 Score=301.92 Aligned_cols=221 Identities=18% Similarity=0.259 Sum_probs=180.0
Q ss_pred HHHHHHHhcCccchhhhHHhhhccccc-------cCCCcc-eEecCCCCCCCCchhhccccCCC--cchhHHHHHHHHHH
Q 018811 45 GVLQNAFNSDIRITASLIRLHFHDCFV-------NGCDGS-ILLDNVANDTSIDSEKFSMANNN--SARGFEVVDAMKAA 114 (350)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~~~~E~~~~~N~~--~~~g~~~Id~iK~~ 114 (350)
+.+++.+......++.||||+||++.+ +|++|+ |.+ .+|++++.|.+ +.+.+.++++||++
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl---------~pe~~w~~N~~~~L~~~~~~Le~ik~~ 87 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL---------APQKDWEVNEPEELAKVLAVLEGIQKE 87 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC---------ccccCcCccCcHHHHHHHHHHHHHHHH
Confidence 667777887778899999999999986 699988 544 46999999997 67899999999999
Q ss_pred HHhh-CCC-CCchHHHHHHhhhhHhhhcCC-----CceeecCCCCCCCCCccccc--cCCCCCCCC------------CH
Q 018811 115 LESA-CPG-IVSCADILAIASEQSVNLSGG-----PSWTVPLGRRDGRTANRSLA--DQNLPTPFQ------------TL 173 (350)
Q Consensus 115 le~~-cp~-~VScADilalAar~AV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~~------------~~ 173 (350)
+... -++ .||+||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+.. ..
T Consensus 88 ~~~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~ 167 (297)
T cd08200 88 FNESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPE 167 (297)
T ss_pred hcccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHH
Confidence 8421 112 699999999999999999999 99999999999987643211 123454322 34
Q ss_pred HHHHHHHHHcCCCCcchhhhhcccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCC
Q 018811 174 DLLKGRFTNVGLNDNTDLVALSGAH-TFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLS 252 (350)
Q Consensus 174 ~~l~~~F~~~Gl~~~~d~VaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~ 252 (350)
+.|++.|.+|||+++ |||||+||| ++|+.|..+ +.| .| ..
T Consensus 168 ~~Lrd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~w------T~ 208 (297)
T cd08200 168 EMLVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------VF------TD 208 (297)
T ss_pred HHHHHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------CC------cC
Confidence 789999999999999 999999997 699887422 111 12 26
Q ss_pred CCCCCChHHHHHhhhc--------------------Cc-----ccccchhcccCCccChHHHHhhhccC--hHHHHHHHH
Q 018811 253 TPDGFDNDYFSNLQAN--------------------NG-----LLQSDQELFSTPGADTIPIVNNFSSN--ETAFFESFA 305 (350)
Q Consensus 253 Tp~~FDN~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa 305 (350)
+|.+|||.||+||+.. .| .+.+|.+|.+|+ +.|++|+.||.| +++||+||+
T Consensus 209 ~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~ 286 (297)
T cd08200 209 RPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFV 286 (297)
T ss_pred CCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHH
Confidence 8999999999999951 01 267899999999 999999999998 999999999
Q ss_pred HHHHHHhcCC
Q 018811 306 VSMIRMGNLS 315 (350)
Q Consensus 306 ~Am~Km~~lg 315 (350)
+||.||+++.
T Consensus 287 ~A~~Klmeld 296 (297)
T cd08200 287 AAWTKVMNLD 296 (297)
T ss_pred HHHHHHHhcC
Confidence 9999999875
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=5.7e-33 Score=290.15 Aligned_cols=221 Identities=19% Similarity=0.258 Sum_probs=176.3
Q ss_pred HHHHHHHHH---HhcCccchhhhHHhhhccccc-------cCCCcc-eEecCCCCCCCCchhhccccC--CCcchhHHHH
Q 018811 42 IILGVLQNA---FNSDIRITASLIRLHFHDCFV-------NGCDGS-ILLDNVANDTSIDSEKFSMAN--NNSARGFEVV 108 (350)
Q Consensus 42 iV~~~v~~~---~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~~~~E~~~~~N--~~~~~g~~~I 108 (350)
+|+++|.+. +....-..+.|||++||++.+ +|++|+ |.+. +|++++.| .++.+.+.++
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~---------pe~~w~~N~p~gL~~vl~~L 499 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE---------PQKNWPVNEPTRLAKVLAVL 499 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc---------hhcCcccCCHHHHHHHHHHH
Confidence 335555543 455566789999999999986 699998 6654 59999999 7677899999
Q ss_pred HHHHHHHHhhCCCCCchHHHHHHhhhhHhhhc---CCC--ceeecCCCCCCCCCccccccCCCC---CC-----------
Q 018811 109 DAMKAALESACPGIVSCADILAIASEQSVNLS---GGP--SWTVPLGRRDGRTANRSLADQNLP---TP----------- 169 (350)
Q Consensus 109 d~iK~~le~~cp~~VScADilalAar~AV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p----------- 169 (350)
+.||+++.. ..||.||+|+||+..|||.+ ||| .|++.+||.|.+.... +++...| .+
T Consensus 500 e~Ik~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~ 575 (716)
T TIGR00198 500 EKIQAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDY 575 (716)
T ss_pred HHHHHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccc
Confidence 999998842 27999999999999999999 897 5799999999987643 2222222 11
Q ss_pred -CCCHHHHHHHHHHcCCCCcchhhhhccc-cccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCccc
Q 018811 170 -FQTLDLLKGRFTNVGLNDNTDLVALSGA-HTFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLT 247 (350)
Q Consensus 170 -~~~~~~l~~~F~~~Gl~~~~d~VaLsGa-HTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~ 247 (350)
......|++.|.++||+++ |||||+|| |++|+.|..+ +.| .+
T Consensus 576 ~~~~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~~--- 619 (716)
T TIGR00198 576 AVTPEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGS-------KHG-------------------------VF--- 619 (716)
T ss_pred cCCHHHHHHHHHHhCCCChH-HHHheecchhhccccCCCC-------CCC-------------------------CC---
Confidence 1235678899999999999 99999998 5999998532 111 12
Q ss_pred ccCCCCCCCCChHHHHHhhhcC--------------------c---cc--ccchhcccCCccChHHHHhhhccCh--HHH
Q 018811 248 NLDLSTPDGFDNDYFSNLQANN--------------------G---LL--QSDQELFSTPGADTIPIVNNFSSNE--TAF 300 (350)
Q Consensus 248 ~lD~~Tp~~FDN~Yy~~l~~~~--------------------g---lL--~SD~~L~~d~~~~t~~~V~~yA~d~--~~F 300 (350)
..+|.+|||.||+||+... | ++ .+|.+|.+|+ +.|.+|+.||+|+ ++|
T Consensus 620 ---T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F 694 (716)
T TIGR00198 620 ---TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKF 694 (716)
T ss_pred ---cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchH
Confidence 2589999999999998621 2 22 6799999999 9999999999997 899
Q ss_pred HHHHHHHHHHHhcCCC
Q 018811 301 FESFAVSMIRMGNLSL 316 (350)
Q Consensus 301 ~~~Fa~Am~Km~~lgv 316 (350)
|+||++||.|+++++-
T Consensus 695 ~~DF~~Aw~Klm~ldr 710 (716)
T TIGR00198 695 VKDFVAAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999999984
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.2e-32 Score=286.38 Aligned_cols=222 Identities=19% Similarity=0.267 Sum_probs=180.3
Q ss_pred HHHHHHHhcCccchhhhHHhhhccccc-------cCCCcc-eEecCCCCCCCCchhhccccCC--CcchhHHHHHHHHHH
Q 018811 45 GVLQNAFNSDIRITASLIRLHFHDCFV-------NGCDGS-ILLDNVANDTSIDSEKFSMANN--NSARGFEVVDAMKAA 114 (350)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~~~~E~~~~~N~--~~~~g~~~Id~iK~~ 114 (350)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. ++.+.+++++.||++
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~---------Pq~~w~~N~p~~L~~vl~~LE~Ik~~ 512 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA---------PQKDWEVNEPAQLAKVLAVLEGIQAE 512 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc---------cccCccccCHHHHHHHHHHHHHHHHH
Confidence 566777777777899999999999986 699988 6664 599999998 677899999999999
Q ss_pred HHhhCC--CCCchHHHHHHhhhhHhhhc---CC--CceeecCCCCCCCCCccccc--cCCCCCCC------------CCH
Q 018811 115 LESACP--GIVSCADILAIASEQSVNLS---GG--PSWTVPLGRRDGRTANRSLA--DQNLPTPF------------QTL 173 (350)
Q Consensus 115 le~~cp--~~VScADilalAar~AV~~~---GG--P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~ 173 (350)
+...-. ..||.||+|+||+..|||.+ || |.|++.+||.|.+....... ...+|.+. ...
T Consensus 513 f~~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e 592 (726)
T PRK15061 513 FNAAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPE 592 (726)
T ss_pred HhhccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHH
Confidence 964321 26999999999999999998 68 99999999999987543211 12456543 124
Q ss_pred HHHHHHHHHcCCCCcchhhhhcccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCC
Q 018811 174 DLLKGRFTNVGLNDNTDLVALSGAH-TFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLS 252 (350)
Q Consensus 174 ~~l~~~F~~~Gl~~~~d~VaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~ 252 (350)
+.|++.|.++||+++ |||||+||| ++|+.|-.+ +.| .+ ..
T Consensus 593 ~~L~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S-------~~G-------------------------~~------T~ 633 (726)
T PRK15061 593 ELLVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------VF------TD 633 (726)
T ss_pred HHHHHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------CC------cC
Confidence 789999999999999 999999997 788887422 111 12 25
Q ss_pred CCCCCChHHHHHhhhc----------C----------c---c--cccchhcccCCccChHHHHhhhccC--hHHHHHHHH
Q 018811 253 TPDGFDNDYFSNLQAN----------N----------G---L--LQSDQELFSTPGADTIPIVNNFSSN--ETAFFESFA 305 (350)
Q Consensus 253 Tp~~FDN~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa 305 (350)
+|.+|||.||+||+.. . | + +.+|..|.+|+ +.|.+|+.||+| +++||+||+
T Consensus 634 ~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~ 711 (726)
T PRK15061 634 RPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFV 711 (726)
T ss_pred CCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHH
Confidence 8999999999999941 0 1 1 36799999999 999999999999 999999999
Q ss_pred HHHHHHhcCCC
Q 018811 306 VSMIRMGNLSL 316 (350)
Q Consensus 306 ~Am~Km~~lgv 316 (350)
+||.|+++++-
T Consensus 712 ~Aw~Kvmeldr 722 (726)
T PRK15061 712 AAWTKVMNLDR 722 (726)
T ss_pred HHHHHHHhCCC
Confidence 99999999983
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.7e-29 Score=251.14 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=197.9
Q ss_pred HHHHHHHHHHhcCc--------cchhhhHHhhhcccccc-------CCCcceEecCCCCCCCCchhhccccCCCcchhHH
Q 018811 42 IILGVLQNAFNSDI--------RITASLIRLHFHDCFVN-------GCDGSILLDNVANDTSIDSEKFSMANNNSARGFE 106 (350)
Q Consensus 42 iV~~~v~~~~~~~~--------~~aa~lLRL~FHDcfv~-------GcDgSill~~~~~~~~~~~E~~~~~N~~~~~g~~ 106 (350)
.|+..+...+.... ...|.+|||+||-++++ |..+ |..++.++.++|.|.++.+++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~--------G~qRFaPlnSWPDN~nLDKarR 142 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGG--------GQQRFAPLNSWPDNANLDKARR 142 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCC--------CceecccccCCCcccchHHHHH
Confidence 45566666655443 47899999999999873 2222 2456778999999998999999
Q ss_pred HHHHHHHHHHhhCCCCCchHHHHHHhhhhHhhhcCCCceeecCCCCCCCCCccc--------------------------
Q 018811 107 VVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRS-------------------------- 160 (350)
Q Consensus 107 ~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 160 (350)
++..||+++ +..||+||+|.|++.+|++.+|++.+.+..||.|--.+...
T Consensus 143 LLWPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Pla 218 (730)
T COG0376 143 LLWPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLA 218 (730)
T ss_pred HhhhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchh
Confidence 999999988 46899999999999999999999999999999997665540
Q ss_pred -----------cccCCCCCCCCCHHHHHHHHHHcCCCCcchhhhhcc-ccccccccccccccccccCCCCCCCCCCccHH
Q 018811 161 -----------LADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSG-AHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 228 (350)
Q Consensus 161 -----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~d~VaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~ 228 (350)
+-++..|+|-.+..+++..|++|+++++ |.|||++ |||+|++|...-.+.+ +++|.--+-
T Consensus 219 avqMGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~i 290 (730)
T COG0376 219 AVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPI 290 (730)
T ss_pred hheeeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhhc-------CCCccccch
Confidence 1234689999999999999999999999 9999975 9999999976422221 356654444
Q ss_pred HHHHHH--hcCCCCCC-CCcc---cccCCCCCCCCChHHHHHhhhcC---------------------------------
Q 018811 229 LLAQLQ--QLCPQGGN-GSVL---TNLDLSTPDGFDNDYFSNLQANN--------------------------------- 269 (350)
Q Consensus 229 ~~~~L~--~~Cp~~~~-~~~~---~~lD~~Tp~~FDN~Yy~~l~~~~--------------------------------- 269 (350)
-.+.|- +.|-.+.+ +..+ ..-+..||++|||.||.+|+...
T Consensus 291 e~qGlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~ 370 (730)
T COG0376 291 EQQGLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKH 370 (730)
T ss_pred hhhccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCccccc
Confidence 444443 33433222 1111 22345799999999999998531
Q ss_pred --cccccchhcccCCccChHHHHhhhccChHHHHHHHHHHHHHHhcCC
Q 018811 270 --GLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLS 315 (350)
Q Consensus 270 --glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 315 (350)
.||++|.+|.-|| ..++|.++|..|++.|.+.|++||.||..-+
T Consensus 371 ~p~MlttDlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 371 GPMMLTTDLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred CceeeccchhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 5899999999999 9999999999999999999999999998644
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.22 E-value=6.9e-11 Score=119.80 Aligned_cols=217 Identities=20% Similarity=0.311 Sum_probs=151.9
Q ss_pred HHHHHHHhcCccchhhhHHhhhccccc-------cCCCcc-eEecCCCCCCCCchhhccccCCC--cchhHHHHHHHHHH
Q 018811 45 GVLQNAFNSDIRITASLIRLHFHDCFV-------NGCDGS-ILLDNVANDTSIDSEKFSMANNN--SARGFEVVDAMKAA 114 (350)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~~~~E~~~~~N~~--~~~g~~~Id~iK~~ 114 (350)
..++..+....-....|+-.+|-.+-+ +|.+|. |.| .+.|+++.|.. +.+-+.+++.|.+.
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL---------aPqkdWevN~P~~l~kvl~~le~iq~~ 522 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL---------APQKDWEVNQPAELAKVLAVLEKIQKE 522 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee---------cccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 456666777777788899999988865 455543 334 35889999963 34678899999888
Q ss_pred HHhhCCCCCchHHHHHHhhhhHhhhc---CCC--ceeecCCCCCCCCCccccccCCC--CCC-----------CCC-HHH
Q 018811 115 LESACPGIVSCADILAIASEQSVNLS---GGP--SWTVPLGRRDGRTANRSLADQNL--PTP-----------FQT-LDL 175 (350)
Q Consensus 115 le~~cp~~VScADilalAar~AV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~l--P~p-----------~~~-~~~ 175 (350)
+. ..||.||+|+|++..+|+.+ +|- .+++.+||.|.+........-.. |-. ..+ -.-
T Consensus 523 fn----kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~ 598 (730)
T COG0376 523 FN----KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEEL 598 (730)
T ss_pred hc----CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHH
Confidence 86 36999999999999999985 564 45678999999776542111111 111 112 345
Q ss_pred HHHHHHHcCCCCcchhhhhcccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHHhcCCCCCCCCcccccCCCCC
Q 018811 176 LKGRFTNVGLNDNTDLVALSGAH-TFGRAQCQFFSQRLFNFNGTGNPDPTLNATLLAQLQQLCPQGGNGSVLTNLDLSTP 254 (350)
Q Consensus 176 l~~~F~~~Gl~~~~d~VaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp 254 (350)
|++.-+-.+|+.. ||++|.||- -+|. ||.|+ ...+.-| .|
T Consensus 599 LvDkAqlL~Ltap-emtVLiGGlRvLg~-----------n~g~s-------------------------~~GVfT~--~p 639 (730)
T COG0376 599 LVDKAQLLTLTAP-EMTVLIGGLRVLGA-----------NYGGS-------------------------KHGVFTD--RP 639 (730)
T ss_pred HHHHHHHhccCCc-cceEEEcceEeecc-----------CCCCC-------------------------ccceecc--Cc
Confidence 6678888999999 999999974 2221 22221 1123333 68
Q ss_pred CCCChHHHHHhhhc----------C----------cc-----cccchhcccCCccChHHHHhhhccC--hHHHHHHHHHH
Q 018811 255 DGFDNDYFSNLQAN----------N----------GL-----LQSDQELFSTPGADTIPIVNNFSSN--ETAFFESFAVS 307 (350)
Q Consensus 255 ~~FDN~Yy~~l~~~----------~----------gl-----L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~A 307 (350)
..+.|.||.||+.- + |- -..|..+-+++ ..|.+.+-||.| +++|.+||+.|
T Consensus 640 g~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaa 717 (730)
T COG0376 640 GVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAA 717 (730)
T ss_pred ccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHH
Confidence 88889999998842 1 21 13466666777 899999999975 78999999999
Q ss_pred HHHHhcCC
Q 018811 308 MIRMGNLS 315 (350)
Q Consensus 308 m~Km~~lg 315 (350)
|.|..++.
T Consensus 718 w~kVMn~D 725 (730)
T COG0376 718 WTKVMNLD 725 (730)
T ss_pred HHHHhccc
Confidence 99999876
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=72.74 E-value=2.4 Score=34.69 Aligned_cols=21 Identities=33% Similarity=0.423 Sum_probs=14.8
Q ss_pred CchhHHHHHHHHHHHHHhccc
Q 018811 1 MSPLRYLLAAAVLFAFVLDES 21 (350)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (350)
|+++.+|||+++|++++|.++
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 899988777776655555544
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=60.59 E-value=8.6 Score=30.55 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcCccccccccccCC
Q 018811 299 AFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 334 (350)
Q Consensus 299 ~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn~~ 334 (350)
+....|..||.||+.||... .-.-+|+.|-..
T Consensus 2 ~m~~~F~~am~KlavLG~d~----~~LiDCSdVIP~ 33 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDR----SDLIDCSDVIPV 33 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-G----GGSEE-GGGS--
T ss_pred hHHHHHHHHHHHHHHhcCCh----hhcccchhhccC
Confidence 35689999999999999643 235589988733
No 21
>PTZ00411 transaldolase-like protein; Provisional
Probab=53.05 E-value=1.1e+02 Score=30.54 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHhhCCCCCchHHHHHHhhhhHhh--hcCCCceeecCCCCCCCCCccccccCCCCCC---CCCHHHHH
Q 018811 103 RGFEVVDAMKAALESACPGIVSCADILAIASEQSVN--LSGGPSWTVPLGRRDGRTANRSLADQNLPTP---FQTLDLLK 177 (350)
Q Consensus 103 ~g~~~Id~iK~~le~~cp~~VScADilalAar~AV~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~ 177 (350)
.|++++..+++ . .|.|-=.+.+....|+. .+|-..+..++||.+-..-.+.......+.. -..+.++.
T Consensus 148 eGi~Aa~~L~~----e---GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~ 220 (333)
T PTZ00411 148 EGIQAAKALEK----E---GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIY 220 (333)
T ss_pred HHHHHHHHHHH----C---CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHH
Confidence 46655544433 1 24433333444444332 3588889999999854322111111111211 23467888
Q ss_pred HHHHHcCCCCc
Q 018811 178 GRFTNVGLNDN 188 (350)
Q Consensus 178 ~~F~~~Gl~~~ 188 (350)
++|++.|+..+
T Consensus 221 ~~~k~~g~~T~ 231 (333)
T PTZ00411 221 NYYKKHGYKTI 231 (333)
T ss_pred HHHHHcCCCeE
Confidence 88988887653
No 22
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.83 E-value=34 Score=26.54 Aligned_cols=29 Identities=14% Similarity=0.216 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCccchhhhHHhhhcccc
Q 018811 42 IILGVLQNAFNSDIRITASLIRLHFHDCF 70 (350)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~lLRL~FHDcf 70 (350)
|.|+.+++.++++|.+-...||+.+--.+
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qmG 52 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQMG 52 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence 89999999999999999999999987554
No 23
>PRK01844 hypothetical protein; Provisional
Probab=32.47 E-value=62 Score=25.26 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhcCccchhhhHHhhhcccc
Q 018811 42 IILGVLQNAFNSDIRITASLIRLHFHDCF 70 (350)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~lLRL~FHDcf 70 (350)
+.|+.+++.++++|.+-...||.-|--.+
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QMG 52 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQMG 52 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHhC
Confidence 78999999999999999999999887553
No 24
>PRK00523 hypothetical protein; Provisional
Probab=20.55 E-value=1.3e+02 Score=23.51 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCccchhhhHHhhhcccc
Q 018811 42 IILGVLQNAFNSDIRITASLIRLHFHDCF 70 (350)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~lLRL~FHDcf 70 (350)
+.|+.+++.++++|.+-...||.-|--.+
T Consensus 25 iark~~~k~l~~NPpine~mir~M~~QMG 53 (72)
T PRK00523 25 VSKKMFKKQIRENPPITENMIRAMYMQMG 53 (72)
T ss_pred HHHHHHHHHHHHCcCCCHHHHHHHHHHhC
Confidence 78899999999999999999999887553
Done!