Query 018813
Match_columns 350
No_of_seqs 195 out of 681
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 06:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 3.1E-88 1.1E-92 627.1 16.6 216 28-243 1-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 1.7E-83 5.9E-88 589.6 13.0 202 28-243 1-206 (206)
3 1aun_A PR-5D; antifungal prote 100.0 8.8E-83 3E-87 585.7 14.2 203 27-245 1-208 (208)
4 2vhk_A Thaumatin-I; kinetics o 100.0 1.5E-82 5.3E-87 583.2 15.4 204 28-244 1-206 (206)
5 1z3q_A Thaumatin-like protein; 100.0 7.3E-82 2.5E-86 576.5 13.4 197 28-243 1-200 (200)
6 3g7m_A Xylanase inhibitor TL-X 100.0 2.4E-53 8.1E-58 373.7 13.4 117 28-149 1-118 (151)
7 3gd0_A Laminaripentaose-produc 92.3 0.6 2.1E-05 46.2 9.8 114 25-148 4-148 (367)
8 4aor_D Trypsin inhibitor 3; hy 81.6 0.42 1.4E-05 32.4 0.8 14 182-195 11-24 (37)
9 3gd0_A Laminaripentaose-produc 47.3 12 0.00042 36.9 3.5 41 204-244 320-366 (367)
10 4ajy_V VON hippel-lindau disea 39.7 21 0.00072 31.5 3.4 48 26-79 20-67 (163)
11 1lm8_V VHL, VON hippel-lindau 33.1 37 0.0013 29.8 3.9 49 26-80 17-65 (160)
12 2hrv_A 2A cysteine proteinase; 24.9 19 0.00064 31.3 0.5 18 90-108 97-114 (142)
13 1z8r_A Coxsackievirus B4 polyp 23.3 21 0.00073 31.7 0.6 18 90-108 117-134 (166)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=3.1e-88 Score=627.13 Aligned_cols=216 Identities=56% Similarity=1.130 Sum_probs=206.8
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeeeecccccCCCCCCcCccCCccCCcccccC
Q 018813 28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECN 107 (350)
Q Consensus 28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C~ 107 (350)
++|||+|||+|||||++++++|+++|..+||+|+||++++|.+|++|+|||||||+|+||++|+++|+|||||+|+|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~ 80 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN 80 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEec-cCCCceeeeccccccCCccEEEecCCCCCCCcccccCcCcCCCCccccCCC--C--Ccccchh
Q 018813 108 GLGAAPPATLAEFTLG-SGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGE--G--DACKSAC 182 (350)
Q Consensus 108 g~G~~pPaTLAEFTL~-~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C~~~gC~~dln~~CP~eL~v~~--g--~~C~SaC 182 (350)
+.+++||+|||||+|+ .+++|||||||||||||||+|+|++|.+.|+.++|.+|||..||.||||++ + +||||||
T Consensus 81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC 160 (222)
T 2ahn_A 81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSAC 160 (222)
T ss_dssp TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHH
T ss_pred CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccc
Confidence 9888999999999994 557899999999999999999999876789999999999999999999963 2 4999999
Q ss_pred hhcCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEecC
Q 018813 183 EAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFCP 243 (350)
Q Consensus 183 ~afg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFCP 243 (350)
.+|++|||||+|+|++|++|+|+.|+++||++||+||||||||++|||||++ ++|+|||||
T Consensus 161 ~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 161 VKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred cccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 9999999999999999999999999999999999999999999999999986 699999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=1.7e-83 Score=589.60 Aligned_cols=202 Identities=49% Similarity=1.006 Sum_probs=190.7
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCC-CceeeeecccccCCCCCCcCccCCccCCccccc
Q 018813 28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTG-WSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVEC 106 (350)
Q Consensus 28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~-WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C 106 (350)
++|||+|||+|||||++++. .+||+|+||++++|++|++ |+|||||||+|+||++|+++|+||||| |+|+|
T Consensus 1 ~tfti~N~C~~tVWp~~~p~-------~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 72 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPV-------GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCG-GVLQC 72 (206)
T ss_dssp CEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCT-TBSSC
T ss_pred CEEEEEeCCCCCcCCeEecC-------CCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCC-Ceeec
Confidence 58999999999999999862 4689999999999999999 999999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEec-cCCCceeeeccccccCCccEEEecCCCCCC-CcccccCcCcCCCCccccCCCCCcccchhhh
Q 018813 107 NGLGAAPPATLAEFTLG-SGGQDFYDVSLVDGYNLPMIVESSGGSGLC-STTGCSTDVNRQCPAELRVGEGDACKSACEA 184 (350)
Q Consensus 107 ~g~G~~pPaTLAEFTL~-~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C-~~~gC~~dln~~CP~eL~v~~g~~C~SaC~a 184 (350)
++ +++||+|||||+|+ .+++|||||||||||||||+|+|++++ .| +.++|.+|||..||.||||+ +||||||++
T Consensus 73 ~g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~-~C~~~~~C~~dln~~CP~~L~v~--~gC~saC~~ 148 (206)
T 1du5_A 73 TG-YGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGS-GCSRGPRCAVDVNARCPAELRQD--GVCNNACPV 148 (206)
T ss_dssp CS-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSS-SCCCCCEECSCTTTTCCGGGEET--TEECCHHHH
T ss_pred CC-CCCCcceeeEEEeccCCCCceeeeeeecccccCEEEecCCCC-CCcCCCcccccchhhCCHHHhhc--cccCChhhc
Confidence 98 67899999999994 467899999999999999999998642 69 99999999999999999997 589999999
Q ss_pred cCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEecC
Q 018813 185 FGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFCP 243 (350)
Q Consensus 185 fg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFCP 243 (350)
|++|||||+|+|++ +|+|+.||++||++||+||||||||++|||||++ ++|+|||||
T Consensus 149 f~~~~yCC~g~~~~--~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 149 FKKDEYCCVGSAAN--DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp HCCHHHHCCGGGGG--GCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred cCCCcccccCCCCC--cCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999987 9999999999999999999999999999999985 799999998
No 3
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=8.8e-83 Score=585.67 Aligned_cols=203 Identities=46% Similarity=0.996 Sum_probs=190.0
Q ss_pred ceEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCc-eeeeecccccCCCCCCcCccCCccCCcccc
Q 018813 27 SATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWS-GRFWGRTRCNFDGSGSGSCLTGDCGSGQVE 105 (350)
Q Consensus 27 a~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~Ws-GRiWaRTGCsfd~~G~~~C~TGDCGsG~l~ 105 (350)
+++|||+|||+|||||++++. .+||+|+||++++|++|++|+ |||||||+|+||++|+++|+||||| |+|+
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~-------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~ 72 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLE 72 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSS
T ss_pred CcEEEEEeCCCCCcCCeEecC-------CCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcC-ceee
Confidence 469999999999999999862 468999999999999999995 9999999999999999999999999 9999
Q ss_pred cCCCCCCCCcceEEEEe-ccCCCceeeeccccccCCccEEEecC-CCCCCCcccccCcCcCCCCccccCCCCCcccchhh
Q 018813 106 CNGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVESSG-GSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACE 183 (350)
Q Consensus 106 C~g~G~~pPaTLAEFTL-~~~g~DfYDVSLVDGyNlPm~I~P~g-G~~~C~~~gC~~dln~~CP~eL~v~~g~~C~SaC~ 183 (350)
|++ +++||+|||||+| +.+++|||||||||||||||+|+|++ +++.|+.++|.+|||..||.||||++ +|||||+
T Consensus 73 C~g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~~--~C~saC~ 149 (208)
T 1aun_A 73 CKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG--GCNNPCT 149 (208)
T ss_dssp CSS-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT--EECCHHH
T ss_pred cCC-CCCCCcceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHcccc--cccCHhh
Confidence 998 6689999999999 44578999999999999999999986 34679999999999999999999975 8999999
Q ss_pred hcCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC--CceEEEecCCC
Q 018813 184 AFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG--ADYTVTFCPSS 245 (350)
Q Consensus 184 afg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~--~~Y~VtFCP~~ 245 (350)
+|++|||||+| ++|+|+.|+++||++||+||||||||++|||||++ ++|+|||||++
T Consensus 150 af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~g 208 (208)
T 1aun_A 150 TFGGQQYCCTQ-----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp HTCSHHHHCTT-----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred hcCCCcccccC-----CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCCC
Confidence 99999999999 79999999999999999999999999999999985 79999999963
No 4
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=1.5e-82 Score=583.22 Aligned_cols=204 Identities=43% Similarity=0.941 Sum_probs=190.4
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCC-CceeeeecccccCCCCCCcCccCCccCCccccc
Q 018813 28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTG-WSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVEC 106 (350)
Q Consensus 28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~-WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C 106 (350)
++|||+|||+||||||+++ +++.+..+||+|+||++++|.+|++ |+|||||||+|+||++|+++|+||||| |+|+|
T Consensus 1 ~tfti~N~C~~tVWp~~~~--g~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 77 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASK--GDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCG-GLLRC 77 (206)
T ss_dssp CEEEEEECSSSCEEEEEEC--SSSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCT-TBSSC
T ss_pred CEEEEEeCCCCCcCCEEcC--CCCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCC-ceeec
Confidence 5899999999999999997 4466678899999999999999999 999999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEeccCCCceeeeccccccCCccEEEecCCCCCCCcccccCcCcCCCCccccCCCCCcccchhhhcC
Q 018813 107 NGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFG 186 (350)
Q Consensus 107 ~g~G~~pPaTLAEFTL~~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C~~~gC~~dln~~CP~eL~v~~g~~C~SaC~afg 186 (350)
++ +++||+|||||+|+..+.|||||||||||||||+|+|++ +.|+.++|.+|||..||.||||++ +||||||.+|+
T Consensus 78 ~g-~g~pPaTLaEftl~~~~~dfYDVSlVDGfNlP~~i~p~~--g~C~~~~C~~dln~~CP~eL~v~~-~~C~saC~af~ 153 (206)
T 2vhk_A 78 KR-FGRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMNFSPTT--RGCRGVRCAADIVGQCPAKLKAPG-GGCNDACTVFQ 153 (206)
T ss_dssp SS-CCCSSCCEEEEEEEETTEEEEEEECTTCBSSCEEEEESS--SSCCCEEECSCHHHHCCGGGBCTT-SSBCCHHHHHC
T ss_pred CC-CCCCCcceEEEEeccCCCceeeeeccCCccCCEEeeeCC--CCCCccccccchhhhCCHHHeecc-ccccChhhccC
Confidence 98 678999999999953333999999999999999999986 479999999999999999999984 48999999999
Q ss_pred CccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEecCC
Q 018813 187 SAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFCPS 244 (350)
Q Consensus 187 ~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFCP~ 244 (350)
+|||||+| ++|+|+.||++||++||+||||||||++| |||++ ++|+|||||.
T Consensus 154 ~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 154 TSEYCCTT-----GKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp CHHHHTTT-----SCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred CCcccccC-----CCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 99999999 79999999999999999999999999999 99985 7999999994
No 5
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=7.3e-82 Score=576.55 Aligned_cols=197 Identities=48% Similarity=1.037 Sum_probs=186.0
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCc-eeeeecccccCCCCCCcCccCCccCCccccc
Q 018813 28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWS-GRFWGRTRCNFDGSGSGSCLTGDCGSGQVEC 106 (350)
Q Consensus 28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~Ws-GRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C 106 (350)
++|||+|||+||||||+++ .+||+|+||++++|++|++|+ |||||||+|+||++|+++|+||||| |+|+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p--------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 71 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVP--------GGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCG-GVLSC 71 (200)
T ss_dssp CEEEEEECSSSCEEEEEET--------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSSC
T ss_pred CEEEEEeCCCCCeeceEeC--------CCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcC-Ceeec
Confidence 5899999999999999963 469999999999999999995 9999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEe-ccCCCceeeeccccccCCccEEEecCCCCCCCcccccCcCcCCCCccccCCCCCcccchhhhc
Q 018813 107 NGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAF 185 (350)
Q Consensus 107 ~g~G~~pPaTLAEFTL-~~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C~~~gC~~dln~~CP~eL~v~~g~~C~SaC~af 185 (350)
++ +++||+|||||+| +.+++|||||||||||||||+|+|++ +.|+.++|.+|||..||.||||++ ||||||++|
T Consensus 72 ~g-~g~pPaTLaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~--g~C~~~~C~~dln~~CP~~L~v~~--gC~saC~af 146 (200)
T 1z3q_A 72 TA-YGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTS--GGCRGIRCAADINGQCPGALKAPG--GCNNPCTVF 146 (200)
T ss_dssp SS-CCCSSCCEEEEEEEETTTEEEEEEECTTCBSSCEEEEESS--SSSCCEEECSCHHHHCCTTTEETT--EECCHHHHH
T ss_pred CC-CCCCCcceEEEEecCCCCCceeeeeeeccccCCeeeeeCC--CCCCccccccchhhhCCHHHcccC--cccCccccc
Confidence 98 5679999999999 45678999999999999999999986 469999999999999999999975 899999999
Q ss_pred CCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEecC
Q 018813 186 GSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFCP 243 (350)
Q Consensus 186 g~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFCP 243 (350)
++|||||+| ++|+|+.||++||++||+||||||||++|+|||++ ++|+|||||
T Consensus 147 ~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 147 KTDQYCCNS-----GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHCTT-----SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred CCCcccCCC-----CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 999999999 79999999999999999999999999999999984 799999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=2.4e-53 Score=373.74 Aligned_cols=117 Identities=38% Similarity=0.739 Sum_probs=107.0
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeeeecccccCCCCCCcCccCCccCCcccccC
Q 018813 28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECN 107 (350)
Q Consensus 28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C~ 107 (350)
++|||+|||+||||||++++ . .+..+||+|+||++++|.+|++|+|||||||+|+||++|+++|+|||||+|+|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~~-~--~p~~gG~~L~~g~s~~~~~p~~wsGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~ 77 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALV-L--AQGGGGTELHPGASWSLDTPVIGSQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCG 77 (151)
T ss_dssp CCEEEEECSSSCEEEEEEET-T--SSCCEECCBCTTCEEEECCCSSEEEEEEEEESCEECSSCCEECSBSCSSTTSCCSC
T ss_pred CEEEEEeCCCCCccCeeccC-C--CCCCCCeEcCCCCeEEEECCCCCcceeecccCCCCCCCCCcccccCCccCCccccc
Confidence 47999999999999999964 2 23578999999999999999999999999999999999999999999966999999
Q ss_pred CCCCCCCcceEEEEeccCCCceeeeccc-cccCCccEEEecCC
Q 018813 108 GLGAAPPATLAEFTLGSGGQDFYDVSLV-DGYNLPMIVESSGG 149 (350)
Q Consensus 108 g~G~~pPaTLAEFTL~~~g~DfYDVSLV-DGyNlPm~I~P~gG 149 (350)
+. ++||+|||||+|+ +++|||||||| |||||||+|+|+++
T Consensus 78 ~~-g~pPaTlaEftl~-~~~d~YDVSlV~dG~NlP~~i~P~~g 118 (151)
T 3g7m_A 78 GN-PAVPTTMAEVSVL-QGNYTYGVTSTLKGFNVPMNLKCSSG 118 (151)
T ss_dssp SC-CCSSCCEEEEEEC-SSEEEEEEESSSSCCSSCEEEEESSS
T ss_pred CC-CCCCceeEEEEcc-CCCceEEEEeccCCCCCCeEEEeCCC
Confidence 75 5899999999996 47899999999 99999999999864
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=92.31 E-value=0.6 Score=46.15 Aligned_cols=114 Identities=19% Similarity=0.190 Sum_probs=67.0
Q ss_pred ccceEEEEEeCCCC--cccceeecCC---CCCC--------------------CCCCCccc-CCCCeEEEEeCCCCceee
Q 018813 25 VLSATFTFVNKCDY--TIWPGILANA---GSPR--------------------LDSTGFEL-PQDSSRSFVAPTGWSGRF 78 (350)
Q Consensus 25 a~a~tfTi~N~C~~--TVWpgi~~~~---G~p~--------------------l~~~Gf~L-~pG~S~si~vP~~WsGRi 78 (350)
...-.|+|+||=.. .||..|++.. |... ...-.+.| .+|++++++||. .+|||
T Consensus 4 ~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~sGRI 82 (367)
T 3gd0_A 4 PATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-FSGRI 82 (367)
T ss_dssp CSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-EEEEE
T ss_pred CCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-cCceE
Confidence 34568999999974 6997776431 2110 01112445 367899999998 79999
Q ss_pred eecccccCCCCCCcCccCCccCCcccccCCCC-CCC----CcceEEEEeccCCCceeeeccccccCCccEEEecC
Q 018813 79 WGRTRCNFDGSGSGSCLTGDCGSGQVECNGLG-AAP----PATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSG 148 (350)
Q Consensus 79 WaRTGCsfd~~G~~~C~TGDCGsG~l~C~g~G-~~p----PaTLAEFTL~~~g~DfYDVSLVDGyNlPm~I~P~g 148 (350)
|=-.|=. =.+.=..+ |.++=.-.. ..| --.-+|||+.. ..-|=++|.||-|.+||.|+-.+
T Consensus 83 yfS~g~~----L~f~~~~~----glv~Ps~~NpsDPN~~~~~~f~EfT~n~-~gl~~N~S~VD~~~~Pl~l~l~~ 148 (367)
T 3gd0_A 83 YFSYGRK----MEFRLTTG----GLVQPAVQNPTDPNRDILFNWSEYTLND-SGLWINSTQVDMFSAPYTVGVRR 148 (367)
T ss_dssp EEEESSC----CCCEEETT----EECCCCTTSTTCTTTTSCEEEEEEEEET-TEEEEECCCSSEECSCEEEEEEC
T ss_pred EEEcCCc----cEEEecCC----CccCCCCCCCCCCCCCceeeEEEEEecC-cceecccceeccccCceEEEEEc
Confidence 9432210 01111111 111111010 011 12569999963 35778999999999999997554
No 8
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=81.61 E-value=0.42 Score=32.35 Aligned_cols=14 Identities=64% Similarity=1.488 Sum_probs=12.2
Q ss_pred hhhcCCccccccCC
Q 018813 182 CEAFGSAEYCCSGA 195 (350)
Q Consensus 182 C~afg~~~yCC~G~ 195 (350)
|..||.|+|||+|+
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 66799999999994
No 9
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=47.28 E-value=12 Score=36.86 Aligned_cols=41 Identities=22% Similarity=0.420 Sum_probs=29.4
Q ss_pred CCcchhHhhhcCC--CCcccCCCCC---CCceeecC-CceEEEecCC
Q 018813 204 PSVYSQVFKSACP--KSYSYAYDDA---TSTFTCTG-ADYTVTFCPS 244 (350)
Q Consensus 204 ps~YS~~FK~aCP--~AYSYayDD~---tStfTC~~-~~Y~VtFCP~ 244 (350)
-+.|++++++.=. .+|.|||||- +++..-.. ...+||+-|-
T Consensus 320 tNhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~~ 366 (367)
T 3gd0_A 320 TNHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDPF 366 (367)
T ss_dssp SCHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECCC
T ss_pred ccHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcCC
Confidence 3579999999855 7899999984 34444433 5678887663
No 10
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=39.73 E-value=21 Score=31.54 Aligned_cols=48 Identities=23% Similarity=0.464 Sum_probs=37.3
Q ss_pred cceEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeee
Q 018813 26 LSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFW 79 (350)
Q Consensus 26 ~a~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiW 79 (350)
..+.++|+|+++.+|-+-++.-.|.+..- -.|+||+.+.++- |.+..|
T Consensus 20 ~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y---~tL~PG~~~~~~T---Y~tHpW 67 (163)
T 4ajy_V 20 EPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLW 67 (163)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCeEEecC---CCCCcE
Confidence 35789999999999999998877776433 2799999888753 556666
No 11
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=33.06 E-value=37 Score=29.84 Aligned_cols=49 Identities=22% Similarity=0.425 Sum_probs=36.6
Q ss_pred cceEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeeee
Q 018813 26 LSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWG 80 (350)
Q Consensus 26 ~a~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiWa 80 (350)
..+.++|+|+++.+|-+-++.-.|.+..- ..|+||+.+.+.- +.+..|-
T Consensus 17 ~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y---~~L~PG~~~~q~T---Y~tHpWi 65 (160)
T 1lm8_V 17 EPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLWL 65 (160)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCEEeCCC---cCCCcEE
Confidence 35789999999999998888777765432 2599999887752 5566663
No 12
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=24.91 E-value=19 Score=31.31 Aligned_cols=18 Identities=50% Similarity=1.294 Sum_probs=15.6
Q ss_pred CCcCccCCccCCcccccCC
Q 018813 90 GSGSCLTGDCGSGQVECNG 108 (350)
Q Consensus 90 G~~~C~TGDCGsG~l~C~g 108 (350)
|.+.|+-|||| |.|.|..
T Consensus 97 g~G~~epGDCG-G~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCG-GKLLCKH 114 (142)
T ss_dssp EECCCCTTCTT-CEEEETT
T ss_pred EEcCCCCCCCC-ceeeeCC
Confidence 56789999999 9999973
No 13
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=23.27 E-value=21 Score=31.67 Aligned_cols=18 Identities=33% Similarity=0.732 Sum_probs=15.7
Q ss_pred CCcCccCCccCCcccccCC
Q 018813 90 GSGSCLTGDCGSGQVECNG 108 (350)
Q Consensus 90 G~~~C~TGDCGsG~l~C~g 108 (350)
|.+.|+-|||| |.|.|..
T Consensus 117 ~~G~~epGDCG-G~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAG-GILRCEH 134 (166)
T ss_dssp EECSSSCCCCB-SEEECSS
T ss_pred EecCCCCCCCC-ceeeeCC
Confidence 56889999999 9999983
Done!