Query 018814
Match_columns 350
No_of_seqs 169 out of 1927
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:15:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018814hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 6.6E-37 1.4E-41 281.6 29.0 290 45-350 4-299 (302)
2 PTZ00343 triose or hexose phos 100.0 8.7E-36 1.9E-40 278.4 33.9 293 40-346 46-350 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.9E-35 8.4E-40 264.1 16.6 293 43-349 17-312 (316)
4 KOG1444 Nucleotide-sugar trans 100.0 4.7E-33 1E-37 245.0 25.9 295 41-349 10-305 (314)
5 PF08449 UAA: UAA transporter 100.0 5E-28 1.1E-32 222.4 29.4 275 59-350 16-303 (303)
6 KOG1442 GDP-fucose transporter 100.0 1.2E-30 2.6E-35 222.9 6.0 290 46-347 31-330 (347)
7 PLN00411 nodulin MtN21 family 100.0 1.2E-26 2.6E-31 216.2 30.6 287 45-349 15-333 (358)
8 PRK11272 putative DMT superfam 100.0 4.8E-26 1E-30 208.3 31.5 271 46-348 15-289 (292)
9 PRK11689 aromatic amino acid e 100.0 4.2E-26 9E-31 209.0 30.0 265 45-346 10-289 (295)
10 PRK11453 O-acetylserine/cystei 100.0 1.8E-25 4E-30 205.1 31.9 274 45-347 10-290 (299)
11 PRK10532 threonine and homoser 100.0 3.7E-25 8E-30 202.5 32.7 270 43-348 12-285 (293)
12 TIGR00950 2A78 Carboxylate/Ami 99.9 5.1E-25 1.1E-29 198.3 28.0 252 59-339 5-259 (260)
13 PRK15430 putative chlorampheni 99.9 6.5E-25 1.4E-29 201.1 28.7 277 43-343 8-284 (296)
14 COG5070 VRG4 Nucleotide-sugar 99.9 4.8E-26 1E-30 189.2 16.6 287 43-348 6-300 (309)
15 KOG1443 Predicted integral mem 99.9 5.7E-24 1.2E-28 185.1 20.4 287 45-343 18-314 (349)
16 PF06027 DUF914: Eukaryotic pr 99.9 4.1E-23 8.9E-28 188.7 27.0 271 59-347 29-308 (334)
17 TIGR03340 phn_DUF6 phosphonate 99.9 4.5E-21 9.8E-26 174.5 23.4 270 48-341 6-280 (281)
18 KOG1581 UDP-galactose transpor 99.9 1.4E-20 3E-25 164.2 24.8 284 48-348 14-317 (327)
19 TIGR00688 rarD rarD protein. T 99.9 2.8E-20 6E-25 167.1 25.1 250 45-318 4-255 (256)
20 COG0697 RhaT Permeases of the 99.9 4.3E-19 9.3E-24 161.7 32.9 275 46-347 10-290 (292)
21 KOG1580 UDP-galactose transpor 99.8 1.2E-20 2.6E-25 158.4 12.7 258 70-344 49-313 (337)
22 COG5006 rhtA Threonine/homoser 99.8 2.2E-18 4.7E-23 146.7 22.6 250 61-345 30-283 (292)
23 KOG4510 Permease of the drug/m 99.8 1.3E-20 2.9E-25 161.0 5.8 277 43-347 38-328 (346)
24 KOG2765 Predicted membrane pro 99.8 3.3E-18 7.3E-23 153.2 19.3 224 119-345 157-391 (416)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 1.6E-16 3.5E-21 144.9 26.3 262 45-345 7-289 (290)
26 KOG1582 UDP-galactose transpor 99.8 1.6E-17 3.5E-22 142.5 17.7 285 45-346 45-334 (367)
27 KOG3912 Predicted integral mem 99.8 6.1E-17 1.3E-21 139.6 21.1 298 45-344 5-334 (372)
28 PF04142 Nuc_sug_transp: Nucle 99.8 1.3E-16 2.9E-21 141.1 20.7 212 117-334 13-243 (244)
29 COG2962 RarD Predicted permeas 99.7 3.5E-15 7.5E-20 130.6 26.1 278 42-346 6-285 (293)
30 KOG2234 Predicted UDP-galactos 99.7 1.1E-14 2.4E-19 131.0 27.0 225 118-348 89-326 (345)
31 PF03151 TPT: Triose-phosphate 99.7 2.7E-16 5.9E-21 129.9 14.7 142 202-344 1-153 (153)
32 KOG1583 UDP-N-acetylglucosamin 99.6 1.3E-15 2.7E-20 131.4 10.9 255 73-344 32-314 (330)
33 KOG2766 Predicted membrane pro 99.4 1.3E-13 2.7E-18 117.8 5.4 259 58-345 33-300 (336)
34 COG2510 Predicted membrane pro 99.4 1.2E-11 2.6E-16 94.8 11.1 135 202-343 4-138 (140)
35 TIGR00803 nst UDP-galactose tr 99.3 4.3E-11 9.4E-16 105.1 11.3 192 145-342 2-222 (222)
36 KOG4314 Predicted carbohydrate 99.2 2.7E-11 5.9E-16 99.8 8.6 220 121-348 53-280 (290)
37 PF00892 EamA: EamA-like trans 99.1 2E-10 4.4E-15 90.9 8.8 120 56-191 4-124 (126)
38 PF00892 EamA: EamA-like trans 99.1 5.6E-10 1.2E-14 88.3 10.9 124 211-343 1-125 (126)
39 COG2510 Predicted membrane pro 99.1 1.4E-09 3E-14 83.6 10.3 132 47-192 7-138 (140)
40 PF13536 EmrE: Multidrug resis 99.0 6.9E-10 1.5E-14 86.7 6.5 108 79-197 2-110 (113)
41 TIGR00688 rarD rarD protein. T 98.9 5.6E-08 1.2E-12 87.2 16.4 139 201-343 2-141 (256)
42 PRK15430 putative chlorampheni 98.9 9.7E-08 2.1E-12 87.6 16.9 139 199-343 6-144 (296)
43 PF06800 Sugar_transport: Suga 98.8 5.9E-07 1.3E-11 79.7 18.6 209 119-341 43-268 (269)
44 TIGR03340 phn_DUF6 phosphonate 98.8 1.9E-07 4.2E-12 85.0 16.2 133 203-344 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.8 2.9E-07 6.2E-12 82.7 15.6 133 42-189 127-260 (260)
46 PF05653 Mg_trans_NIPA: Magnes 98.7 5.7E-07 1.2E-11 82.2 13.9 212 129-349 58-297 (300)
47 PLN00411 nodulin MtN21 family 98.5 4.1E-06 9E-11 78.6 16.7 138 201-344 13-156 (358)
48 PRK02971 4-amino-4-deoxy-L-ara 98.5 9.8E-06 2.1E-10 64.4 14.2 124 201-350 2-128 (129)
49 COG2962 RarD Predicted permeas 98.4 1.1E-05 2.5E-10 71.3 14.5 141 198-345 4-145 (293)
50 PRK10532 threonine and homoser 98.4 1.1E-05 2.4E-10 73.9 14.2 132 43-192 148-280 (293)
51 PF03151 TPT: Triose-phosphate 98.3 2.2E-05 4.8E-10 64.4 13.4 143 46-191 3-151 (153)
52 PTZ00343 triose or hexose phos 98.3 4.8E-05 1E-09 71.4 17.2 138 199-344 47-186 (350)
53 PRK11453 O-acetylserine/cystei 98.3 2.5E-05 5.5E-10 71.7 14.6 144 43-193 143-287 (299)
54 PRK11689 aromatic amino acid e 98.2 2.3E-05 4.9E-10 71.9 13.1 131 44-193 157-287 (295)
55 PRK11272 putative DMT superfam 98.2 0.00011 2.4E-09 67.2 16.7 129 204-344 11-141 (292)
56 PF13536 EmrE: Multidrug resis 98.2 4.9E-05 1.1E-09 59.2 12.0 105 238-347 4-109 (113)
57 PRK15051 4-amino-4-deoxy-L-ara 98.2 9.4E-06 2E-10 62.9 7.7 64 129-192 45-108 (111)
58 TIGR00817 tpt Tpt phosphate/ph 98.1 0.00015 3.3E-09 66.6 16.0 125 211-343 12-136 (302)
59 PRK13499 rhamnose-proton sympo 98.0 0.0044 9.6E-08 57.5 24.1 226 117-345 69-342 (345)
60 KOG2922 Uncharacterized conser 97.9 0.00015 3.3E-09 65.1 11.1 215 128-347 70-309 (335)
61 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00054 1.2E-08 62.6 13.3 132 202-346 2-138 (290)
62 PRK15051 4-amino-4-deoxy-L-ara 97.7 0.0009 2E-08 51.8 11.9 63 280-343 45-108 (111)
63 PF04657 DUF606: Protein of un 97.7 0.0034 7.3E-08 50.6 14.7 132 203-341 3-138 (138)
64 COG0697 RhaT Permeases of the 97.7 0.0032 6.8E-08 56.9 16.5 139 200-346 6-145 (292)
65 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00016 3.4E-09 57.5 6.8 70 125-194 51-123 (129)
66 PF08449 UAA: UAA transporter 97.6 0.002 4.3E-08 59.3 14.8 123 215-346 14-138 (303)
67 PRK09541 emrE multidrug efflux 97.4 0.0016 3.5E-08 50.2 9.2 66 280-346 38-105 (110)
68 PF06027 DUF914: Eukaryotic pr 97.3 0.012 2.6E-07 54.5 15.0 138 201-344 13-151 (334)
69 COG2076 EmrE Membrane transpor 97.2 0.0031 6.8E-08 47.7 8.8 55 290-345 49-104 (106)
70 PRK10452 multidrug efflux syst 97.2 0.0034 7.4E-08 49.0 9.1 56 290-346 49-105 (120)
71 PRK10650 multidrug efflux syst 97.2 0.011 2.3E-07 45.5 11.5 53 290-343 54-107 (109)
72 PRK10452 multidrug efflux syst 97.2 0.0014 3E-08 51.2 6.4 69 125-193 34-103 (120)
73 PRK11431 multidrug efflux syst 97.1 0.0048 1E-07 47.0 8.8 54 290-344 48-102 (105)
74 COG4975 GlcU Putative glucose 97.1 6.7E-05 1.4E-09 64.7 -1.7 214 116-346 54-287 (288)
75 COG2076 EmrE Membrane transpor 97.1 0.0017 3.6E-08 49.2 5.9 69 124-192 33-102 (106)
76 PRK10650 multidrug efflux syst 97.0 0.0028 6.1E-08 48.6 6.7 68 124-191 38-106 (109)
77 PRK09541 emrE multidrug efflux 97.0 0.0025 5.4E-08 49.1 6.4 67 127-193 36-103 (110)
78 PRK11431 multidrug efflux syst 97.0 0.0033 7.1E-08 48.0 6.9 67 126-192 34-101 (105)
79 COG5006 rhtA Threonine/homoser 96.7 0.027 5.8E-07 49.2 11.2 130 43-189 148-278 (292)
80 PF05653 Mg_trans_NIPA: Magnes 96.7 0.0084 1.8E-07 54.9 8.7 117 199-343 5-121 (300)
81 PF00893 Multi_Drug_Res: Small 96.7 0.007 1.5E-07 45.2 6.5 56 129-184 37-93 (93)
82 PF04142 Nuc_sug_transp: Nucle 96.6 0.013 2.9E-07 52.0 8.7 74 271-345 17-90 (244)
83 PF10639 UPF0546: Uncharacteri 96.4 0.011 2.4E-07 45.5 6.1 71 120-191 41-112 (113)
84 PF06800 Sugar_transport: Suga 96.4 0.086 1.9E-06 47.2 12.6 66 124-189 198-267 (269)
85 COG3238 Uncharacterized protei 96.2 0.24 5.2E-06 40.2 12.9 139 200-344 4-146 (150)
86 PRK13499 rhamnose-proton sympo 96.1 0.11 2.4E-06 48.3 12.1 137 200-344 6-153 (345)
87 KOG2234 Predicted UDP-galactos 95.9 0.37 7.9E-06 44.4 14.4 132 211-343 25-163 (345)
88 KOG4510 Permease of the drug/m 95.7 0.0061 1.3E-07 53.5 1.9 68 276-344 102-169 (346)
89 TIGR00803 nst UDP-galactose tr 95.5 0.19 4.1E-06 43.9 10.8 63 128-190 159-221 (222)
90 PF00893 Multi_Drug_Res: Small 95.5 0.065 1.4E-06 39.9 6.7 54 281-335 38-93 (93)
91 PF04657 DUF606: Protein of un 95.3 0.53 1.2E-05 37.8 12.0 129 46-190 4-138 (138)
92 KOG1441 Glucose-6-phosphate/ph 95.0 0.049 1.1E-06 50.0 5.7 145 39-193 159-307 (316)
93 KOG2765 Predicted membrane pro 93.2 0.57 1.2E-05 43.5 8.6 67 129-195 326-392 (416)
94 KOG1581 UDP-galactose transpor 93.1 1.6 3.4E-05 39.5 11.0 73 118-190 238-310 (327)
95 COG5070 VRG4 Nucleotide-sugar 91.1 2.6 5.7E-05 36.4 9.6 74 116-189 219-292 (309)
96 COG3238 Uncharacterized protei 89.4 8.9 0.00019 31.2 11.0 134 44-191 6-144 (150)
97 COG4975 GlcU Putative glucose 88.4 0.25 5.4E-06 43.2 1.5 132 202-347 3-139 (288)
98 KOG4314 Predicted carbohydrate 86.9 0.58 1.3E-05 39.5 2.8 61 283-344 65-125 (290)
99 KOG1444 Nucleotide-sugar trans 86.3 4.7 0.0001 36.8 8.4 140 45-192 159-299 (314)
100 PF10639 UPF0546: Uncharacteri 85.4 1.8 4E-05 33.3 4.7 51 290-341 60-111 (113)
101 KOG1580 UDP-galactose transpor 85.3 0.84 1.8E-05 39.7 3.0 72 119-190 239-310 (337)
102 PF06379 RhaT: L-rhamnose-prot 82.3 25 0.00054 32.7 11.3 138 200-345 6-154 (344)
103 KOG2922 Uncharacterized conser 82.1 0.59 1.3E-05 42.5 0.9 120 198-345 18-137 (335)
104 PF07857 DUF1632: CEO family ( 77.4 6.8 0.00015 34.9 6.0 130 202-346 1-136 (254)
105 PRK02237 hypothetical protein; 76.6 7.1 0.00015 29.6 5.0 47 298-345 60-106 (109)
106 PF04342 DUF486: Protein of un 76.3 18 0.00038 27.4 7.0 29 312-341 77-105 (108)
107 KOG1443 Predicted integral mem 76.2 25 0.00055 32.1 9.2 66 126-191 248-313 (349)
108 PF02694 UPF0060: Uncharacteri 74.1 20 0.00043 27.2 6.8 48 298-346 58-105 (107)
109 PF06379 RhaT: L-rhamnose-prot 74.0 76 0.0017 29.5 20.3 104 116-220 68-192 (344)
110 KOG3912 Predicted integral mem 69.5 14 0.00031 33.2 6.0 66 277-343 92-157 (372)
111 KOG4831 Unnamed protein [Funct 69.0 7.5 0.00016 29.3 3.5 70 121-191 53-123 (125)
112 KOG1583 UDP-N-acetylglucosamin 67.6 7.3 0.00016 34.9 3.8 137 43-191 164-312 (330)
113 PF04342 DUF486: Protein of un 64.8 54 0.0012 24.9 7.4 55 137-191 51-106 (108)
114 KOG1442 GDP-fucose transporter 62.8 3.2 6.9E-05 37.1 0.7 52 289-341 120-171 (347)
115 PF05297 Herpes_LMP1: Herpesvi 52.7 4.6 9.9E-05 36.1 0.0 99 142-241 44-146 (381)
116 TIGR01167 LPXTG_anchor LPXTG-m 49.1 23 0.00049 20.4 2.6 19 323-341 9-27 (34)
117 KOG1582 UDP-galactose transpor 47.7 1.2E+02 0.0026 27.5 7.8 53 143-195 282-334 (367)
118 TIGR03644 marine_trans_1 proba 47.5 2.7E+02 0.0058 26.8 16.2 88 157-247 253-341 (404)
119 PRK02237 hypothetical protein; 46.7 22 0.00047 27.1 2.8 40 154-193 66-105 (109)
120 PF02694 UPF0060: Uncharacteri 45.0 23 0.00049 26.9 2.7 43 151-193 61-103 (107)
121 COG1742 Uncharacterized conser 44.6 31 0.00067 26.0 3.2 41 154-194 65-105 (109)
122 PF08627 CRT-like: CRT-like; 43.1 1.5E+02 0.0031 23.4 6.8 37 45-82 59-95 (130)
123 PF11139 DUF2910: Protein of u 42.1 2.2E+02 0.0048 24.4 9.2 19 155-173 160-178 (214)
124 KOG2766 Predicted membrane pro 36.7 7.2 0.00016 34.6 -1.2 67 275-342 82-148 (336)
125 PF10225 DUF2215: Uncharacteri 34.6 3.3E+02 0.0072 24.2 10.1 33 289-321 113-145 (249)
126 PF05570 DUF765: Circovirus pr 34.0 21 0.00046 19.3 0.7 20 6-25 3-22 (29)
127 PF06123 CreD: Inner membrane 30.3 5.2E+02 0.011 25.1 12.2 61 164-226 314-376 (430)
128 PF07857 DUF1632: CEO family ( 29.9 4.1E+02 0.0088 23.8 8.6 65 127-191 61-132 (254)
129 PF08693 SKG6: Transmembrane a 26.2 53 0.0012 20.2 1.6 19 330-348 21-39 (40)
130 COG1742 Uncharacterized conser 25.8 95 0.0021 23.5 3.2 46 300-346 61-106 (109)
131 TIGR02865 spore_II_E stage II 25.2 8.2E+02 0.018 25.8 14.6 45 147-191 10-54 (764)
132 cd01324 cbb3_Oxidase_CcoQ Cyto 25.2 81 0.0018 20.1 2.5 22 328-349 15-36 (48)
133 PF00909 Ammonium_transp: Ammo 24.1 6.4E+02 0.014 24.1 15.8 25 275-299 355-379 (399)
134 PF05961 Chordopox_A13L: Chord 23.6 94 0.002 21.4 2.6 22 327-348 5-26 (68)
135 TIGR00905 2A0302 transporter, 22.7 7.1E+02 0.015 24.2 12.1 46 199-248 418-463 (473)
136 COG3169 Uncharacterized protei 21.3 3.6E+02 0.0078 20.2 11.2 30 312-342 84-113 (116)
137 PF06570 DUF1129: Protein of u 20.9 5.3E+02 0.011 22.0 11.0 16 160-175 188-203 (206)
138 PRK11715 inner membrane protei 20.7 7.9E+02 0.017 23.9 11.8 58 167-226 323-382 (436)
139 TIGR00905 2A0302 transporter, 20.6 7.8E+02 0.017 23.9 15.1 21 327-347 417-437 (473)
140 PF07444 Ycf66_N: Ycf66 protei 20.5 1.1E+02 0.0024 22.2 2.7 24 323-346 4-27 (84)
141 PF04018 DUF368: Domain of unk 20.4 6.2E+02 0.014 22.6 8.1 25 118-142 51-75 (257)
142 PF03616 Glt_symporter: Sodium 20.1 7.5E+02 0.016 23.4 14.8 35 155-190 313-349 (368)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.6e-37 Score=281.58 Aligned_cols=290 Identities=19% Similarity=0.207 Sum_probs=238.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
.+..+.|++.+++.+++||+++++ |++|+++++.|+.++.+.+.+....+..+ +.+.++++++..
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 68 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPK-------------RLKISSALLKLL 68 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCC-------------CCCCCHHHHHHH
Confidence 567889999999999999999985 57999999999999988776663322211 122567899999
Q ss_pred hhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhHHH
Q 018814 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYA 204 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~ 204 (350)
++.|+++.++..++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+....+.+.+..|++
T Consensus 69 ~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~ 148 (302)
T TIGR00817 69 LPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFL 148 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHH
Confidence 99998899999999999999999999999999999999999999999999999999999999998876666677778999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhh-cCCC----ccchhHHHHHHHHHH
Q 018814 205 VVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPY----LLSPGFLVVLCFSCI 279 (350)
Q Consensus 205 l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~~ 279 (350)
++++|++++++|.++.||..++.++++.+++.|++..+.+.+.|.....++..... +... ......+...+..+.
T Consensus 149 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T TIGR00817 149 SAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM 228 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence 99999999999999999988755689999999999999999998877655422111 0000 011122222333333
Q ss_pred -HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814 280 -LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350 (350)
Q Consensus 280 -~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~ 350 (350)
.....+...+.++++++|++.++.++++|++++++|++++|| ++|+.+++|+++++.|+++|++.|.+|+
T Consensus 229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge-~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGT-KISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCC-CCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 233344556789999999999999999999999999999999 9999999999999999999998776653
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=8.7e-36 Score=278.36 Aligned_cols=293 Identities=19% Similarity=0.199 Sum_probs=241.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchH
Q 018814 40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK 119 (350)
Q Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
...+..+.++.|+.+|+..++.||++++++ ++|++++++|++++.+++.+....+.++.++ ....++
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~ 112 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWATGFRKIPR-----------IKSLKL 112 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----------CCCHHH
Confidence 455668899999999999999999999874 6799999999999988766554433222110 001245
Q ss_pred HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccc
Q 018814 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD 199 (350)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~ 199 (350)
+++.+++.|++........+.|++++++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++
T Consensus 113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~ 192 (350)
T PTZ00343 113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT 192 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhH
Confidence 78899999988877777788999999999999999999999999999999999999999999999999999888888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccC-----CCChhhHHHHHHHHHHHHHHHHHHHhccc--hhhh-c----CCCccc
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSS-----GLNSFGLMWCNGVICGPLLLLWTFLRGDL--ETTI-N----FPYLLS 267 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-~----~~~~~~ 267 (350)
..|++++++|++++|++.++.|+..++. +.++.++..++.+.+.++++|+....+.. ...+ . ......
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 8999999999999999999999988753 25677777778899999999887654321 1111 0 011111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
...+..++.+++..+..|.+.|.++++++|.+.++.+++||++++++|++++|| ++|+.+++|.+++++|+++|++.|
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge-~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQT-QVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCC-CCchHhHHHHHHHHHHHHHHhhcC
Confidence 223445666788888889888999999999999999999999999999999999 999999999999999999998753
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=264.15 Aligned_cols=293 Identities=27% Similarity=0.417 Sum_probs=253.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
+.......|++++++.++.||++++.++|++|++++..|..++.+.....+..+..+.++ ..++..++
T Consensus 17 ~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~------------~~~~~~~~ 84 (316)
T KOG1441|consen 17 RIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK------------ISSKLPLR 84 (316)
T ss_pred HHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc------------cccccchH
Confidence 335678899999999999999999989999999999999999999988888776544211 12345788
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG 202 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G 202 (350)
..+++|+.+..++++.|.+++++|++++|+++++.|+++.++++++.+|+.++..+.+++.+..|+.+.+.+|.+++..|
T Consensus 85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G 164 (316)
T KOG1441|consen 85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFG 164 (316)
T ss_pred HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--ccCCCChhhHHHHHHHHHHHHHH-HHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIG--KSSGLNSFGLMWCNGVICGPLLL-LWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
...++.+.+..++++++.|++. ++++.|+.+++.|+.+++...++ |+....+...........++..++..++.+ +
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v 243 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-V 243 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-H
Confidence 9999999999999999999998 46789999999999999999998 776543221110001112223333444444 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecC
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG 349 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~ 349 (350)
+++..|.+.|++++++||++.++.+.+|.+..++.||++|+| +.|+.+..|.++.+.|+.+|++.|.++
T Consensus 244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~-pvt~~n~~G~~iai~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGN-PVTFLNALGYAIAILGVFLYSRAKLKE 312 (316)
T ss_pred HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecC-CCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999 999999999999999999999988764
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-33 Score=245.03 Aligned_cols=295 Identities=34% Similarity=0.590 Sum_probs=269.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHH
Q 018814 41 TRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT 120 (350)
Q Consensus 41 ~~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (350)
+.+.+..++.|+++|..+++.||++++.++||...++...|.+.+.+.+...++.+..++++ .+++.
T Consensus 10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~-------------l~~~~ 76 (314)
T KOG1444|consen 10 QSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRP-------------LDLRT 76 (314)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCC-------------cChHH
Confidence 34558899999999999999999999999888777778899999999999999988887654 66788
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccch
Q 018814 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDF 200 (350)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~ 200 (350)
.|+++|.++.+.++.+.+..+++|++++.++++|+.+|+++++.+..++|.|++++.|.++..+.+|......+|.+++.
T Consensus 77 ~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~ 156 (314)
T KOG1444|consen 77 AKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNL 156 (314)
T ss_pred HHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchh-hhcCCCccchhHHHHHHHHHH
Q 018814 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLET-TINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 279 (350)
.|+.|++...++.+.+.++.|+..+..+.+.+++++|+++++.+.+.....++||+.. ..+.+.+.+..++..+..+|+
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 8999999999999999999999988778899999999999999999999999999872 123444667788899999999
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecC
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG 349 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~ 349 (350)
++++.+|+.++|.+..||++.++++ ++-.+.+.+++++++|.+.++..++|..+-+.|..+|++.+.++
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 9999999999999999999999999 88888888888888777999999999999999999999876443
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=5e-28 Score=222.41 Aligned_cols=275 Identities=23% Similarity=0.327 Sum_probs=232.3
Q ss_pred HHHHHHHhhc-CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHH
Q 018814 59 VMFNKAALSS-YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV 137 (350)
Q Consensus 59 ~~~~K~~l~~-~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (350)
.++.+.+.++ ++.++|.++++.|++++.+.........+.+. .++..++++.+.++++.++..+
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---------------SRKIPLKKYAILSFLFFLASVL 80 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---------------CCcChHHHHHHHHHHHHHHHHH
Confidence 3444555543 33347999999999999888776655433110 2223467788889999999999
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcc----c------chhHHHHHH
Q 018814 138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS----F------DFFGYAVVF 207 (350)
Q Consensus 138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~l~l 207 (350)
.|.|++|+|.++.+++|++.|+++++++.+++|||++++++.++++..+|+++...+|.+ . +..|+++.+
T Consensus 81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~ 160 (303)
T PF08449_consen 81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLL 160 (303)
T ss_pred HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999996554421 1 123999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHH--hccchhhhcCCCccchhHHHHHHHHHHHHHHHH
Q 018814 208 LANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285 (350)
Q Consensus 208 ~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 285 (350)
+|.++.|++.+++||+.++++.++.++++|.+.++.+..++.... ++|..+..++.. ..+..+..++..++.+...+
T Consensus 161 ~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~ 239 (303)
T PF08449_consen 161 LSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQ 239 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999889999999999999999999888887 777665544432 23446778888888888888
Q ss_pred HHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814 286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350 (350)
Q Consensus 286 ~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~ 350 (350)
...+..+++.+|.+.++...++.+.++++|+++||+ ++++.+|+|.++++.|..+|++.|+|+|
T Consensus 240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~-~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGH-PLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCC-cCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 888899999999999999999999999999999999 9999999999999999999999988875
No 6
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.2e-30 Score=222.86 Aligned_cols=290 Identities=24% Similarity=0.294 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHc-----cccccccCCCCccCCCCCCccch
Q 018814 46 NAAISYMACAVLLVMFNKAALSS--YNFPCANVITLLQMISSCSFLYFLRRW-----KIINFTMGDSLMTSDSSSTFVPL 118 (350)
Q Consensus 46 ~~~l~~~~~~~~~~~~~K~~l~~--~~f~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 118 (350)
.....+..+++++.+.||++++. ...+.|.+.+++|.++...++..+.+. +..++++ -.++.
T Consensus 31 ~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~-----------~~ldl 99 (347)
T KOG1442|consen 31 SAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS-----------LQLDL 99 (347)
T ss_pred hhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc-----------ccccH
Confidence 34556779999999999999985 456789999999999999888776542 2233332 22677
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC---
Q 018814 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD--- 195 (350)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--- 195 (350)
+..+...|+++.+.+.+.+.|.|++|++++++.+-|++..+|+.++.++++|+|-+.....++++++.|..+...+|
T Consensus 100 ~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~ 179 (347)
T KOG1442|consen 100 ATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST 179 (347)
T ss_pred HHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999977766
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHH
Q 018814 196 LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLC 275 (350)
Q Consensus 196 ~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 275 (350)
...++.|.++++.|+++.|+..+++||.....+-.-+.+.+|+++.+.++.+|...+.||....+.++..++..+|..+.
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence 45678999999999999999999999988766666788999999999999999999999999998888888889999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
++|++++.+++...+.+|.+||.+..+.+..|....++++..+.+| ..+..-|-|-+++++|...|.+.|.
T Consensus 260 LsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E-~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 260 LSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSE-TKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHH-HhhhheeeeeEEEEehhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 9999999999999999999997654
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=1.2e-26 Score=216.16 Aligned_cols=287 Identities=13% Similarity=0.077 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
.++.+.--+...++..+.|..++. +. .|..+.++|+.++.+++.++.+.++++.+ .++.+++++..+
T Consensus 15 ~~~~~~~q~~~~~~~~~~k~a~~~-G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----------~~~~~~~~~~~l 81 (358)
T PLN00411 15 LTAMLATETSVVGISTLFKVATSK-GL-NIYPFLGYSYLLASLLLLPSLFFTNRSRS-----------LPPLSVSILSKI 81 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CC-CccHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cCcchHHHHHHH
Confidence 444445556666777788999974 54 47779999999999888766543322100 111346677777
Q ss_pred hhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHH------hccccCcchhhhHHHhhhhceeeecc-Cc-
Q 018814 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFL------AGQKYTPPVVGSVGLIILGAFVAGAR-DL- 196 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~- 196 (350)
...|++......+++.+++|+++++++++.++.|++++++++++ +|||++++++.|++++++|+.+.... +.
T Consensus 82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcc
Confidence 77775555566689999999999999999999999999999999 69999999999999999999874321 10
Q ss_pred ----------------------ccc-hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCh-hhHHHHHHHHHHHHHHHHHHH
Q 018814 197 ----------------------SFD-FFGYAVVFLANITTAIYLATIARIGKSSGLNS-FGLMWCNGVICGPLLLLWTFL 252 (350)
Q Consensus 197 ----------------------~~~-~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~ 252 (350)
..+ ..|+.+.++|+++||+|.+..|+..+ ++++ ...+.|+..++...+.+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~--~~~~~~~~t~~~~~~~~~~~~~~~l~ 239 (358)
T PLN00411 162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMS--EYPAAFTVSFLYTVCVSIVTSMIGLV 239 (358)
T ss_pred cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCcHhHHHHHHHHHHHHHHHHHHHH
Confidence 112 35999999999999999999999887 4444 456667776666655554443
Q ss_pred hccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHH
Q 018814 253 RGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQ 332 (350)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~ 332 (350)
.++.. ...+....+... ..+++.++.+.+.....++++++.+|..++++.+++|++++++|++++|| ++++.+++|+
T Consensus 240 ~~~~~-~~~~~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE-~lt~~~~iG~ 316 (358)
T PLN00411 240 VEKNN-PSVWIIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND-SLYLGCLIGG 316 (358)
T ss_pred HccCC-cccceeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCC-CCcHHHHHHH
Confidence 32210 011111112222 33555666544433344689999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHhhhheecC
Q 018814 333 LLGFLGSGLYAYYKLVG 349 (350)
Q Consensus 333 ~li~~g~~~~~~~~~~~ 349 (350)
++++.|+++..+.+++|
T Consensus 317 ~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 317 ILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 99999999988765543
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=4.8e-26 Score=208.32 Aligned_cols=271 Identities=11% Similarity=0.066 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHh
Q 018814 46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125 (350)
Q Consensus 46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (350)
...++|+..++ ..|..+++. +|..++++|+.++.+++.+....++.+ ..++++++...
T Consensus 15 ~~~~iWg~~~~----~~K~~~~~~---~p~~~~~~R~~~a~l~ll~~~~~~~~~---------------~~~~~~~~~~~ 72 (292)
T PRK11272 15 ALYIIWGSTYL----VIRIGVESW---PPLMMAGVRFLIAGILLLAFLLLRGHP---------------LPTLRQWLNAA 72 (292)
T ss_pred HHHHHHhhHHH----HHHHHhccC---CHHHHHHHHHHHHHHHHHHHHHHhCCC---------------CCcHHHHHHHH
Confidence 34455555554 559988866 799999999999988876655432211 02345677677
Q ss_pred hHHHH-HHHHHHHhhhhh-cccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc-CcccchhH
Q 018814 126 PLAVA-YLLYMVVSVESV-RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFG 202 (350)
Q Consensus 126 ~~~~~-~~~~~~~~~~al-~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G 202 (350)
..|.+ ......+.+.+. ++++++.++++.++.|+++++++.+ +|||++++++.+++++++|+.+...+ +.+.+..|
T Consensus 73 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G 151 (292)
T PRK11272 73 LIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWG 151 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHH
Confidence 77744 456677888888 9999999999999999999999985 69999999999999999999886433 33455679
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
++++++++++||.+.+..||..+ + ++.....++..++.+.+.+.....++.. ....+...|..+++.++++.
T Consensus 152 ~l~~l~a~~~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~i~~s 223 (292)
T PRK11272 152 AILILIASASWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLAVFGS 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999754 2 3455677888888887777665433211 11123445677788888877
Q ss_pred HHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814 283 FLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 283 ~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~ 348 (350)
...+.. ++++++.++.+.++..+++|+.++++|++++|| ++++.+++|+++++.|+++.++.+++
T Consensus 224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E-~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGE-TLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 666655 689999999999999999999999999999999 99999999999999999998876554
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=4.2e-26 Score=208.96 Aligned_cols=265 Identities=14% Similarity=0.089 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
++.+++|+.. ....|..++++ +|..+.++|+.++.+++.+... +.+ .++++++..
T Consensus 10 l~a~~~Wg~~----~~~~k~~~~~~---~P~~~~~~R~~~a~l~l~~~~~--~~~----------------~~~~~~~~~ 64 (295)
T PRK11689 10 LIAILLWSTM----VGLIRGVSESL---GPVGGAAMIYSVSGLLLLLTVG--FPR----------------LRQFPKRYL 64 (295)
T ss_pred HHHHHHHHHH----HHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHcc--ccc----------------cccccHHHH
Confidence 3444555544 44669999877 7999999999999888775431 111 011122333
Q ss_pred hhHHHHHHHHHHHhhhhhcc----cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc----
Q 018814 125 LPLAVAYLLYMVVSVESVRG----VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---- 196 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~----~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---- 196 (350)
+..++.+.....+.+.+++| ++++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++.
T Consensus 65 ~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~ 144 (295)
T PRK11689 65 LAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSL 144 (295)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchh
Confidence 34446666777777777754 5778889999999999999999999999999999999999999988654432
Q ss_pred -------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchh
Q 018814 197 -------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPG 269 (350)
Q Consensus 197 -------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (350)
+.+..|++++++++++||.|.++.||..+ +.++..... ..+...+.+.....++.. ...+..
T Consensus 145 ~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~------~~~~~~ 213 (295)
T PRK11689 145 AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPA------MVFSLP 213 (295)
T ss_pred hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCcc------ccCCHH
Confidence 12346999999999999999999999876 456655322 222333333333332211 112334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 270 FLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.|..+++.++.+....+..++++|+.+|.+.++..+++|++++++|++++|| ++++.+++|+++++.|+.+....+
T Consensus 214 ~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE-~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 214 AIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLST-PLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHhHHHHhhhH
Confidence 4555666665444445555799999999999999999999999999999999 999999999999999997776543
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=1.8e-25 Score=205.15 Aligned_cols=274 Identities=13% Similarity=0.097 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
++.+++|+..+. ..|..+++. +|..+.++|+.++.+.+...... .+ .+ ++..
T Consensus 10 l~~~~~Wg~~~~----~~k~~~~~~---~p~~~~~~R~~~a~~~l~~~~~~--~~----------------~~---~~~~ 61 (299)
T PRK11453 10 LLVVVVWGLNFV----VIKVGLHNM---PPLMLAGLRFMLVAFPAIFFVAR--PK----------------VP---LNLL 61 (299)
T ss_pred HHHHHHHhhhHH----HHHHHHhcC---CHHHHHHHHHHHHHHHHHHHhcC--CC----------------Cc---hHHH
Confidence 445566655555 559988876 79999999999877655443321 11 11 1233
Q ss_pred hhHHHH-HHHHHHHhhhhhcc-cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC---cccc
Q 018814 125 LPLAVA-YLLYMVVSVESVRG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---LSFD 199 (350)
Q Consensus 125 ~~~~~~-~~~~~~~~~~al~~-~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~ 199 (350)
...|+. ......+.+.+++| .+++.+.++.++.|+++.+++++++|||++++++.+++++++|+.+...++ .+.+
T Consensus 62 ~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~ 141 (299)
T PRK11453 62 LGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVA 141 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchh
Confidence 444543 33444577788888 688999999999999999999999999999999999999999998865432 2334
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCC-CChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSG-LNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC 278 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (350)
..|++++++++++|+.|.++.|+..++.+ ........++...+.+.........++...........+...|..+++.+
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 57999999999999999999999875322 12233445555554443333332222211110001123456678889999
Q ss_pred HHHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 279 ILAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
+++....+.. ++.+++.++.+.++..+++|++++++|++++|| ++++.+++|+++++.|+++..+.++
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE-~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDE-RLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHHhcchh
Confidence 9988888877 588999999999999999999999999999999 9999999999999999988765443
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=3.7e-25 Score=202.50 Aligned_cols=270 Identities=16% Similarity=0.041 Sum_probs=206.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
++....++-.+++.......|+.+++. +|..+.++|++++.+++.+..+.++.+ .++++++
T Consensus 12 ~~~~~~~la~~~~~~~~~~~K~~~~~~---~~~~~~~~R~~~a~l~l~~~~~~~~~~----------------~~~~~~~ 72 (293)
T PRK10532 12 LPILLLLIAMASIQSGASLAKSLFPLV---GAPGVTALRLALGTLILIAIFKPWRLR----------------FAKEQRL 72 (293)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhHHhcc----------------CCHHHHH
Confidence 344555555555556666789999876 788899999999998887654322111 3456777
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--C-cccc
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR--D-LSFD 199 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~ 199 (350)
..+..|+++.....+++++++|+|++.++++..+.|+++.+++. ||+.+ +.++.++++|+.++... + .+.+
T Consensus 73 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~ 146 (293)
T PRK10532 73 PLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVD 146 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCC
Confidence 77788877888888999999999999999999999999998773 55544 45567788998875422 2 2335
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
..|++++++++++||.|.+..|+..+ +.++... .++..++...+.++....++ ....+...|..+++.++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~l~lgv 216 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATV-AIGSLIAALIFVPIGALQAG-------EALWHWSILPLGLAVAI 216 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHH-HHHHHHHHHHHHHHHHHccC-------cccCCHHHHHHHHHHHH
Confidence 67999999999999999999999976 4566665 45556666666665553321 01123334555678888
Q ss_pred HHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814 280 LAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~ 348 (350)
++...++.. ++++++.+|.++++..+++|++++++|++++|| ++++.+++|+++++.|++.+.+..++
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE-~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGE-TLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888777766 699999999999999999999999999999999 99999999999999999999765444
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=5.1e-25 Score=198.28 Aligned_cols=252 Identities=17% Similarity=0.152 Sum_probs=201.6
Q ss_pred HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHH-HHHHHHHHH
Q 018814 59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLA-VAYLLYMVV 137 (350)
Q Consensus 59 ~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 137 (350)
.+..|+.+++. .++..+.+.|++.+.+++.+....+ + ++++++.....| ++..+...+
T Consensus 5 ~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~l~~~~ 63 (260)
T TIGR00950 5 GVVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR--P-----------------PLKRLLRLLLLGALQIGVFYVL 63 (260)
T ss_pred HHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc--c-----------------CHhHHHHHHHHHHHHHHHHHHH
Confidence 34669988753 4788889999998887776554332 1 123445555555 677889999
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc-CcccchhHHHHHHHHHHHHHHH
Q 018814 138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFGYAVVFLANITTAIY 216 (350)
Q Consensus 138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~l~l~sa~~~a~~ 216 (350)
++.|++|+++++++++.++.|+++++++.+++|||++++++.++.++++|+.+...+ +.+.+..|++++++++++++.+
T Consensus 64 ~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~ 143 (260)
T TIGR00950 64 YFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALG 143 (260)
T ss_pred HHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999885433 3445568999999999999999
Q ss_pred HHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHHhhcc
Q 018814 217 LATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-FLNTTLN 295 (350)
Q Consensus 217 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~ 295 (350)
.++.|+..++.+.++.....+...++.+++.+.....++.. ..+...|..++..++++....+.. ++++++.
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 216 (260)
T TIGR00950 144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-------QALSLQWGALLYLGLIGTALAYFLWNKGLTLV 216 (260)
T ss_pred HHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999998744433455555778888888877766543321 113345566777887776655555 6899999
Q ss_pred chhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHH
Q 018814 296 SAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGS 339 (350)
Q Consensus 296 ~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~ 339 (350)
++.+.+...+++|+++.+++++++|| +++..+++|.++++.|+
T Consensus 217 ~~~~~s~~~~~~pv~~~ll~~~~~~E-~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 217 DPSAASILALAEPLVALLLGLLILGE-TLSLPQLIGGALIIAAV 259 (260)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999 99999999999999986
No 13
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=6.5e-25 Score=201.14 Aligned_cols=277 Identities=10% Similarity=-0.036 Sum_probs=192.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
++.+..++-.+.+.......|.. .++ +|..+.++|++++.+++......++.. ++.. ++..+++++.
T Consensus 8 ~g~~~~l~a~~~wg~~~~~~k~~-~~~---~~~~~~~~R~~~a~~~l~~~~~~~~~~-~~~~--------~~~~~~~~~~ 74 (296)
T PRK15430 8 QGVLLALAAYFIWGIAPAYFKLI-YYV---PADEILTHRVIWSFFFMVVLMSICRQW-SYLK--------TLIQTPQKIF 74 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCC---CHHHHHHHHHHHHHHHHHHHHHHHccH-HHHH--------HHHcCHHHHH
Confidence 44444444445555555566875 444 689999999999987665443322110 0000 0001233433
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG 202 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G 202 (350)
.....+++...+..+++++++++|++.++++.++.|+++++++++++|||+++++|.+++++++|+.++..++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~---- 150 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL---- 150 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----
Confidence 3334447778889999999999999999999999999999999999999999999999999999999865332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
..++++++++||.|.++.|+..++...+......|+.+++.+...+.. .+.. .... ......+..+...++.+.
T Consensus 151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~~~~~~~g~~t~ 224 (296)
T PRK15430 151 PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSST--SHMG-QNPMSLNLLLIAAGIVTT 224 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCc--cccc-CCcHHHHHHHHHHHHHHH
Confidence 256888999999999999887543222333444555555544432211 1100 0000 111122344555565555
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
....+.++++++.+|...++..+++|++++++|++++|| ++++.+++|+++++.|+.+..
T Consensus 225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E-~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGE-KPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence 666666799999999999999999999999999999999 999999999999988877665
No 14
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.94 E-value=4.8e-26 Score=189.23 Aligned_cols=287 Identities=24% Similarity=0.385 Sum_probs=252.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
.+....+.|+.+++.+++.||++++..+|+-.+.+.+.|.+++.+.+.+++..+..+++ ..+.+
T Consensus 6 s~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----------------~t~aK 69 (309)
T COG5070 6 SELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----------------LTKAK 69 (309)
T ss_pred ccchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----------------hhhhh
Confidence 34667889999999999999999999999999999999999999988888887766543 34678
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc------
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------ 196 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------ 196 (350)
.++|+++...+..+....+++|.+++.+++.++++.+.++..+..++|.|++..+..+-++++.....+.++|.
T Consensus 70 ~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~ 149 (309)
T COG5070 70 KWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK 149 (309)
T ss_pred hhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999988888886
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHH
Q 018814 197 --SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVL 274 (350)
Q Consensus 197 --~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (350)
..+ .|++|.....+..+.+....|+..+-.+....+.++|+++++.|.+..+.+..+||..- +.........+...
T Consensus 150 ~~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am 227 (309)
T COG5070 150 AQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAM 227 (309)
T ss_pred hcccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHH
Confidence 344 69999999999999999999998875567788999999999999999999999987542 11112223345678
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~ 348 (350)
..+|+++++..++.-|++|.++.++.++.+.+......+.|.++|+| +.+...+....+-..+..+|.+.|.+
T Consensus 228 ~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffda-p~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 228 FISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDA-PVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred HHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 99999999999999999999876543
No 15
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.93 E-value=5.7e-24 Score=185.07 Aligned_cols=287 Identities=21% Similarity=0.248 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccch-HHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL-KTLMH 123 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 123 (350)
+..++.|+++|++.++++|+.-. +|++|.+++.+|+++-++.....++....+.++ .+...++ +.+|+
T Consensus 18 L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r---------~r~~~sw~~~Lr~ 86 (349)
T KOG1443|consen 18 LALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR---------ARVVLSWRDYLRR 86 (349)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc---------cccCCcHHHHHHH
Confidence 55669999999999999999865 468899999999998888776665543322111 0122444 46778
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhHH
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGY 203 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~ 203 (350)
..|.|+.-++...+.|++++|++++.+++.++.+++|+.+++..+.-||+++.-.+.++++.+|+.+.+..+.+++..|.
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf 166 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF 166 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCC---CChhhHHHHHHHHHHHHHHHHHHHhccchhh-----hcCCCccc-hhHHHHH
Q 018814 204 AVVFLANITTAIYLATIARIGKSSG---LNSFGLMWCNGVICGPLLLLWTFLRGDLETT-----INFPYLLS-PGFLVVL 274 (350)
Q Consensus 204 ~l~l~sa~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~l 274 (350)
.+...++++.++...++|+++++.+ .+|....+...+.....++|..+..+..... ++.....+ ......+
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 9999999999999999999987543 5788888888888888888776555432211 11111111 1122456
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
...|.++++.-++-|....+++..+.++.+.+|.+.+.++|.++.+| .++..+|.|.++...|+..+.
T Consensus 247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d-~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKD-QLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhc-chhhhHHHHHHHHHHHHHHhc
Confidence 67778888888888999999999999999999999999999999999 999999999999999999983
No 16
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.93 E-value=4.1e-23 Score=188.72 Aligned_cols=271 Identities=13% Similarity=0.099 Sum_probs=205.4
Q ss_pred HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHh
Q 018814 59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVS 138 (350)
Q Consensus 59 ~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (350)
...++.+-++ +++.|.+-+++-++.-.++.......++.+ + +.....++++++.+.+|++....+++.
T Consensus 29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~----------~~~~~~~~~~w~y~lla~~Dv~aN~~~ 96 (334)
T PF06027_consen 29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGF-K----------KWLKVLKRPWWKYFLLALLDVEANYLV 96 (334)
T ss_pred HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccc-c----------cchhhcchhHHHHHHHHHHHHHHHHHH
Confidence 4455666555 788888777666654444332222222111 0 011123456777888899999999999
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc---------ccchhHHHHHHHH
Q 018814 139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLA 209 (350)
Q Consensus 139 ~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~l~l~s 209 (350)
+.|++|++++.++++.+++.+++++++++++|+|+++.++.|++++++|++++...|. +....|++++++|
T Consensus 97 v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~ 176 (334)
T PF06027_consen 97 VLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLG 176 (334)
T ss_pred HHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988655442 2347899999999
Q ss_pred HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 018814 210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIF 289 (350)
Q Consensus 210 a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 289 (350)
+++||+++++.|+..+ +.+..+...+..+++.++..+..... |..+..+.. ++...+..++..+++-+......-
T Consensus 177 a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p 251 (334)
T PF06027_consen 177 AILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVP 251 (334)
T ss_pred HHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 56788888888888888776655433 433333322 233444444444444444444445
Q ss_pred HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 290 ~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
..++..+|+..++.-....+.+.+.+++++|+ ++++..++|.+++++|.++|+..+.
T Consensus 252 ~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~-~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 252 IVLRMSSATFFNLSLLTSDFYALIIDIFFFGY-KFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHhCccceeehHHHHhhHHHHHHHHHhcCc-cccHHHHHHHHHHHHHhheEEccCC
Confidence 77899999999998888899999999999999 9999999999999999999987543
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.89 E-value=4.5e-21 Score=174.53 Aligned_cols=270 Identities=15% Similarity=0.118 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhH
Q 018814 48 AISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127 (350)
Q Consensus 48 ~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (350)
.++...+....+..+|...++. ++. .+.+...+.+++.+....+..+ ++ .+..+++.+......
T Consensus 6 ~~~aa~~~a~~~~~~k~~~~~~---~~~--~~~~~~~~~~~l~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~ 69 (281)
T TIGR03340 6 VVFSALMHAGWNLMAKSHADKE---PDF--LWWALLAHSVLLTPYGLWYLAQ-VG----------WSRLPATFWLLLAIS 69 (281)
T ss_pred HHHHHHHHHHHHHHHhhcCCch---hHH--HHHHHHHHHHHHHHHHHHhccc-CC----------CCCcchhhHHHHHHH
Confidence 3344455555666778666542 333 4555555555554443322111 00 111233444444555
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC-cccchhHHHHH
Q 018814 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-LSFDFFGYAVV 206 (350)
Q Consensus 128 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~l~ 206 (350)
+........+.+.++++.+++.++.+.++.|+++.+++++++|||+++++|.|+.++++|+.+...++ .+.+..|+.++
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~ 149 (281)
T TIGR03340 70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWA 149 (281)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence 57788889999999999999999999999999999999999999999999999999999998754333 23445788899
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCChhh----HHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 207 FLANITTAIYLATIARIGKSSGLNSFG----LMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 207 l~sa~~~a~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
++++++|+.|.+..|+..+ +.++.. ...++....+....+.....++.. ....+...+..+...++.+.
T Consensus 150 l~aal~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~ 222 (281)
T TIGR03340 150 LAAALGTAIYSLSDKAAAL--GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIG 222 (281)
T ss_pred HHHHHHHHHhhhhcccccc--chhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHH
Confidence 9999999999998887654 223222 222332222111111111111110 00111222333333444444
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~ 341 (350)
......++++++.++...+...+++|+++.++|++++|| +++..+++|++++++|+.+
T Consensus 223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE-~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNE-RWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHhHHh
Confidence 444455799999999999999999999999999999999 9999999999999999875
No 18
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-20 Score=164.19 Aligned_cols=284 Identities=18% Similarity=0.167 Sum_probs=238.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-----------CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCcc
Q 018814 48 AISYMACAVLLVMFNKAALSS-----------YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFV 116 (350)
Q Consensus 48 ~l~~~~~~~~~~~~~K~~l~~-----------~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (350)
-++|++..+-.+++...+++| -.|.++.++.++|-+.+.++-+.+..+...+. .
T Consensus 14 ~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~---------------~ 78 (327)
T KOG1581|consen 14 LLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKEL---------------S 78 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccC---------------C
Confidence 344556666666666777764 26888999999999999988876655433221 1
Q ss_pred chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--
Q 018814 117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-- 194 (350)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-- 194 (350)
..+-+++...+++....+..+++.|++|++-++..+.+++--+-++++..++.|+|++.++++...++..|+.+....
T Consensus 79 ~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~ 158 (327)
T KOG1581|consen 79 GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPN 158 (327)
T ss_pred CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecC
Confidence 223467788889999999999999999999999999999999999999999999999999999999999999884332
Q ss_pred -C------cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccc
Q 018814 195 -D------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS 267 (350)
Q Consensus 195 -~------~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 267 (350)
| .+.++.|+.+...+.++.++.+..+.++.++++.+++.++++.++++.+......+..|.+.+...+-. .+
T Consensus 159 s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~h 237 (327)
T KOG1581|consen 159 SDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EH 237 (327)
T ss_pred CCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cC
Confidence 1 124589999999999999999999999999999999999999999999988877666666554444332 34
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
+..+.-++..+.++.+.+.+.+.-+++.++.+.+.....+.++++.+|.+.||+ ++++.||.|..++++|..+-.+.|+
T Consensus 238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h-~~s~~q~~g~~iVFg~i~l~~~~k~ 316 (327)
T KOG1581|consen 238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGH-PLSSEQWLGVLIVFGGIFLEILLKK 316 (327)
T ss_pred hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCC-ccchhhccCeeeehHHHHHHHHHHH
Confidence 667788899999999999999999999999999999999999999999999999 9999999999999999988876554
Q ss_pred c
Q 018814 348 V 348 (350)
Q Consensus 348 ~ 348 (350)
+
T Consensus 317 ~ 317 (327)
T KOG1581|consen 317 K 317 (327)
T ss_pred h
Confidence 4
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.88 E-value=2.8e-20 Score=167.12 Aligned_cols=250 Identities=8% Similarity=-0.027 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccch-HHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPL-KTLM 122 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 122 (350)
....++..+.+.......|. ..+. +|..+.++|++++.+++.+.... ++++... ++ .++.++ +.+.
T Consensus 4 ~~~~i~a~~~wg~~~~~~k~-~~~~---~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~ 71 (256)
T TIGR00688 4 IIVSLLASFLFGYMYYYSKL-LKPL---PATDILGHRMIWSFPFMLLSVTLFRQWAALI-ER-------LKRIQKRPLIL 71 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccC---CHHHHHHHHHHHHHHHHHHHHHHHcchHHHH-HH-------HhCcccchHHH
Confidence 34444444445555556798 4555 79999999999998776554322 2111000 00 000112 2233
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG 202 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G 202 (350)
.....|++...+..+++.|++++++++++++.++.|+++++++++++|||+++++|++++++++|+.++..++.+.+
T Consensus 72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~--- 148 (256)
T TIGR00688 72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP--- 148 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch---
Confidence 45556677888999999999999999999999999999999999999999999999999999999987644322221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
.++++++++||.|.+..|+..++ +..+.... .....++..+.... .++... ........|..+...|+++.
T Consensus 149 -~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~t~ 219 (256)
T TIGR00688 149 -WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLITG 219 (256)
T ss_pred -HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHHHH
Confidence 46889999999999999887542 22222221 22222232222111 111110 11111224566667777755
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL 318 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~ 318 (350)
......++++|+.+|.+.++..+++|+++.++|+++
T Consensus 220 i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 220 TPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 555566799999999999999999999999999764
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=4.3e-19 Score=161.74 Aligned_cols=275 Identities=16% Similarity=0.136 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHh
Q 018814 46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125 (350)
Q Consensus 46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (350)
...+++...+.......|...+. ..++......|...+..........+..... + ..++.++..+
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~ 74 (292)
T COG0697 10 LALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLR-----------P--ALRPWLLLLL 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhccccc-----------c--cccchHHHHH
Confidence 33444444444444455666654 2245556666999888774333332211000 0 1111233444
Q ss_pred hHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH-HHhccccCcchhhhHHHhhhhceeeeccCcccc---hh
Q 018814 126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY-FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD---FF 201 (350)
Q Consensus 126 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~ 201 (350)
..++.......+++.++++++++.++.+.++.|+++.+++. +++|||++++++.++++.++|+.++..++...+ ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~ 154 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLL 154 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHH
Confidence 44578888899999999999999999999999999999997 777999999999999999999999777655432 48
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW-CNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (350)
|+.+++.+++++|++.+..|+.. +.++..... ++.........+... .+. +.......+..+...+++
T Consensus 155 g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~g~~ 223 (292)
T COG0697 155 GLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFL--SGF------GAPILSRAWLLLLYLGVF 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHh--ccc------cccCCHHHHHHHHHHHHH
Confidence 99999999999999999999887 345555555 444422222222111 111 012234456777888888
Q ss_pred HHH-HHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 281 AFF-LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 281 ~~~-~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
+.. ..+..++.+++.++...+...+.+|+.+.+++++++|| +++..+++|+++++.|+.+...+++
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e-~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE-PLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcccc
Confidence 775 44455799999999999999999999999999999999 9999999999999999999987643
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.2e-20 Score=158.39 Aligned_cols=258 Identities=18% Similarity=0.151 Sum_probs=215.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhhhhcccchhH
Q 018814 70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM 149 (350)
Q Consensus 70 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~ 149 (350)
.|.+...+.++|..+..+..-++...+... +++...-+.....++-|.+..+..|.|++|+|-++
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~---------------~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT 113 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLIRKKT---------------EIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPT 113 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheeecccc---------------cccCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence 377788889999988887765544332211 12222234566677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC-------cccchhHHHHHHHHHHHHHHHHHHHHH
Q 018814 150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-------LSFDFFGYAVVFLANITTAIYLATIAR 222 (350)
Q Consensus 150 ~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------~~~~~~G~~l~l~sa~~~a~~~v~~~~ 222 (350)
..+-+++-|+-++++..++.|++++|++++.++++++|+++....+ .+..-.|-++.++|....++....+.+
T Consensus 114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdr 193 (337)
T KOG1580|consen 114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDR 193 (337)
T ss_pred HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHH
Confidence 9999999999999999999999999999999999999999854321 122237999999999999999999999
Q ss_pred hhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 018814 223 IGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv 302 (350)
+.+.++.+..+++++.++.+.+.+....+++||.+...-+. ...+..|+-+...++.+.+.+.+.|..+...+|.+.|+
T Consensus 194 ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi 272 (337)
T KOG1580|consen 194 IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI 272 (337)
T ss_pred HHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence 98888888899999999999999988888899976544332 23456677888889999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 303 CGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 303 ~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
....+..++++.|+++|++ +++..||.|.++++.|...-..
T Consensus 273 vTTTRKfFTil~SVllf~n-pls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 273 VTTTRKFFTILISVLLFNN-PLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred EeehHHHHHHHHHHHHhcC-cCcHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999999999 9999999999999999876554
No 22
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.83 E-value=2.2e-18 Score=146.66 Aligned_cols=250 Identities=17% Similarity=0.117 Sum_probs=203.9
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhh
Q 018814 61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVE 140 (350)
Q Consensus 61 ~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (350)
+.|.++... .|.-.+++|..++.+++....+-.+.+ .++++++.....|......+.++|.
T Consensus 30 ~Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~r----------------~~~~~~~~~~~yGvsLg~MNl~FY~ 90 (292)
T COG5006 30 FAKSLFPLV---GAAGVTALRLAIAALILLALFRPWRRR----------------LSKPQRLALLAYGVSLGGMNLLFYL 90 (292)
T ss_pred HHHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHhc----------------cChhhhHHHHHHHHHHHHHHHHHHH
Confidence 568888765 678899999999999987766533332 5567889999999999999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec---cCcccchhHHHHHHHHHHHHHHHH
Q 018814 141 SVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFFGYAVVFLANITTAIYL 217 (350)
Q Consensus 141 al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~---~~~~~~~~G~~l~l~sa~~~a~~~ 217 (350)
+++.+|.+.+..+-++.|+.+.+++ .+| .++...+.+.+.|..+... +..+.|+.|..+++.++.||+.|.
T Consensus 91 si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YI 164 (292)
T COG5006 91 SIERIPLGIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYI 164 (292)
T ss_pred HHHhccchhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999877655 333 3445556677777776432 224678899999999999999999
Q ss_pred HHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHHhhccc
Q 018814 218 ATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-FLNTTLNS 296 (350)
Q Consensus 218 v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ 296 (350)
+..||..+ ..+..+-+.+.+.++.++.+|+..... -+...++.....-+..++++....|+. ..++++.+
T Consensus 165 v~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~a-------g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp 235 (292)
T COG5006 165 VLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQA-------GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLP 235 (292)
T ss_pred HHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhc-------chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence 99999986 456777888888899998888776332 233445566667788888999998988 78999999
Q ss_pred hhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 297 AVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 297 a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
+.++++..++||.++.+.|++++|| .+|+.||.|++.++.++.-.+..
T Consensus 236 ~~~F~~LlSLePa~aAl~G~i~L~e-~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 236 ARTFGTLLSLEPALAALSGLIFLGE-TLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999 99999999999999988755443
No 23
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.81 E-value=1.3e-20 Score=161.02 Aligned_cols=277 Identities=10% Similarity=0.021 Sum_probs=203.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
.++.....-+.++.++.+..|.+.. .|..+...|+++-.++.++.....+..+ ..| .+.+ +
T Consensus 38 ~gl~l~~vs~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp----------~g~R--~ 98 (346)
T KOG4510|consen 38 LGLLLLTVSYFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPV--IGP----------EGKR--K 98 (346)
T ss_pred cCceehhhHHHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeee--ecC----------CCcE--E
Confidence 3343333335667777666665542 4677777776655554444332221111 011 0001 1
Q ss_pred HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc------
Q 018814 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------ 196 (350)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------ 196 (350)
.++.-|+.-.......|+|++|.+.+.+.++..++|+||.++++.++||++++.+.++..+.+.|++++..+.+
T Consensus 99 ~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t 178 (346)
T KOG4510|consen 99 WLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTT 178 (346)
T ss_pred EEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCc
Confidence 12222433344456788999999999999999999999999999999999999999999999999999754321
Q ss_pred --------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814 197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP 268 (350)
Q Consensus 197 --------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
+.+..|...++.|+++-|--.+..|++.| +.+......|-..++.+..++.....+++. ..+..
T Consensus 179 ~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~------lP~cg 250 (346)
T KOG4510|consen 179 EGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQ------LPHCG 250 (346)
T ss_pred cccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhcccee------cCccc
Confidence 23356888889999988888888999987 556666667777777777776655555432 22345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
..|++++..|+++++.+......+++-.|...++..+.+-+++.++-+++||| .+|++.|+|+++++.+..+....|.
T Consensus 251 kdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~-~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 251 KDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGH-WPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred cceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcC-CChHHHhhceeeeehhHHHHHHHHH
Confidence 55678889999999999999989888888899999999999999999999999 9999999999999988887776553
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.81 E-value=3.3e-18 Score=153.21 Aligned_cols=224 Identities=17% Similarity=0.153 Sum_probs=173.4
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--
Q 018814 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-- 196 (350)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-- 196 (350)
+..+.-+.++..+++.+++++.||++++++..+++.+++-+||..++.++..||+++.+.+++.+.++|+++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 455566677889999999999999999999999999999999999999999999999999999999999999876632
Q ss_pred ------ccchhHHHHHHHHHHHHHHHHHHHHHhhccC--CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814 197 ------SFDFFGYAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP 268 (350)
Q Consensus 197 ------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
+-...|.+++++||+.||.|.++.||...++ +.|-.....|..++..+++.|..++.... ....++.+...
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~ 315 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSST 315 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCc
Confidence 2236899999999999999999999988765 34444455566666666666544332111 11122222333
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 269 GFLVVLCFSCIL-AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 269 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
.+ ..++..+++ .++-.|...+++-.++|.++++-..+..+++++.-.++=|. ++++.+++|.+.+++|.+..++.
T Consensus 316 q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~-~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 316 QF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGK-HPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred ee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHhheecc
Confidence 33 334444444 55666777788999999999998888888877777665566 99999999999999999998864
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.78 E-value=1.6e-16 Score=144.92 Aligned_cols=262 Identities=13% Similarity=0.127 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
++.+++|+...+ ..|.+. +++++. +. |+.++.+++.......+. ++ ...++.+..-
T Consensus 7 lia~~~wGs~g~----~~k~~~---g~~~~~-~~--~~~~g~l~~~~~~~~~~~--~~------------~~~~~~~~~g 62 (290)
T TIGR00776 7 LIPALFWGSFVL----INVKIG---GGPYSQ-TL--GTTFGALILSIAIAIFVL--PE------------FWALSIFLVG 62 (290)
T ss_pred HHHHHHHhhhHH----HHhccC---CCHHHH-HH--HHHHHHHHHHHHHHHHhC--Cc------------ccccHHHHHH
Confidence 344555555444 447654 333333 32 677777666544332111 00 0112334444
Q ss_pred hhHHHHHHHHHHHhhhhhcccchhHHHHHHH-HHHHHHHHHHHHHhccccCcch----hhhHHHhhhhceeeeccCcc--
Q 018814 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPV----VGSVGLIILGAFVAGARDLS-- 197 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~p~~~~l~~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-- 197 (350)
+..|+.+...+++++.+.++++++.+..+.+ +.+++..+.+.+++||+.++++ +.++++.++|+.+....+.+
T Consensus 63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~ 142 (290)
T TIGR00776 63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA 142 (290)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence 4555778899999999999999999998888 8889999999999999999999 99999999999986432211
Q ss_pred -----cc-hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH---HHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814 198 -----FD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN---GVICGPLLLLWTFLRGDLETTINFPYLLSP 268 (350)
Q Consensus 198 -----~~-~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
.+ ..|++++++|+++|+.|.+..|+. ++++.+..+.+ ..++..+..+... + + ....+.
T Consensus 143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-----~-~~~~~~ 209 (290)
T TIGR00776 143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGHI---L-----A-KPLKKY 209 (290)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHHh---c-----c-cchHHH
Confidence 22 689999999999999999999875 36788874444 4444443332221 0 0 011122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhH----HHHHHHHHHHHHhh
Q 018814 269 GFLVVLCFSCILAFFLNYSIFLNTT-LNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNV----FGQLLGFLGSGLYA 343 (350)
Q Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~----~G~~li~~g~~~~~ 343 (350)
..+.. +..|++....+...+...+ +.++.+.++..+++|+.+++++++++|| +.+..++ +|+++++.|+.+..
T Consensus 210 ~~~~~-~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E-~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 210 AILLN-ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGE-KKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhcc-CCCcceeehhHHHHHHHHHHHHHHh
Confidence 23333 3378775444444457888 9999999999999999999999999999 9999999 99999999998875
Q ss_pred hh
Q 018814 344 YY 345 (350)
Q Consensus 344 ~~ 345 (350)
..
T Consensus 288 ~~ 289 (290)
T TIGR00776 288 IG 289 (290)
T ss_pred cc
Confidence 43
No 26
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.6e-17 Score=142.50 Aligned_cols=285 Identities=18% Similarity=0.151 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFP-CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (350)
++++.-.++.-+..-.+-..+++.-+|+ +.|.++..|+++=.-+-++-.. .+ ++. ++.+| ||.
T Consensus 45 lic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~--~~k---------~r~iP---~rt 108 (367)
T KOG1582|consen 45 LICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LI--QTK---------RRVIP---WRT 108 (367)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--ee--ccc---------ceecc---hhH
Confidence 3333334444455556678888877887 7899999998854332222111 11 111 11133 566
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC----cccc
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD----LSFD 199 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~ 199 (350)
...++.+..++..+.+.++.|.+-++-.+.++|-.+-+++.+.++-++|+++.++.+..+...|.++.+..| .+++
T Consensus 109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~ 188 (367)
T KOG1582|consen 109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN 188 (367)
T ss_pred hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc
Confidence 677788888899999999999999999999999999999999999999999999999999999999976655 4677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
..|+.+.-++.++.|.-...+++.++..+-+..++.+|...++.++++.....+||....+++...++.......+..+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 89999999999999999899999998778888999999999999999999999999888887766665555566666666
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.+++...+....++..+|.+.+.....+...++++|+++|.. ++|....-|..+++.|+++-.+.|
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK-PfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK-PFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC-chHHHHhhhhHHHHHHHHhhcccC
Confidence 777776666677899999999999999999999999999988 999999999999999999877655
No 27
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.78 E-value=6.1e-17 Score=139.61 Aligned_cols=298 Identities=18% Similarity=0.154 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccC-CCCCCccch
Q 018814 45 ANAAISYMACAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTS-DSSSTFVPL 118 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 118 (350)
++..++..++.+..+++.||.=+. =+|++|..-+..-++--++++......+.+...+....+.. .....+.|.
T Consensus 5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf 84 (372)
T KOG3912|consen 5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF 84 (372)
T ss_pred hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence 344556667788888899997652 24888987777766666666655544433322211111000 000111122
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--
Q 018814 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-- 196 (350)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-- 196 (350)
+. +..++.+++-.....+-|.++.+++++.+|++|....+|+.+++.-+++++++.++|+++....+|++.+...|.
T Consensus 85 ~p-~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~ 163 (372)
T KOG3912|consen 85 NP-VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL 163 (372)
T ss_pred Cc-ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence 22 235567899888899999999999999999999999999999999999999999999999999999998655432
Q ss_pred --------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHh-----ccchhh--hc
Q 018814 197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLR-----GDLETT--IN 261 (350)
Q Consensus 197 --------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~--~~ 261 (350)
+.-..|+++.+++-+.-|++.++.+|..++.+.+|.+...|...++.+.+....... ++...- ..
T Consensus 164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g 243 (372)
T KOG3912|consen 164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG 243 (372)
T ss_pred ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence 222579999999999999999999999998899999999999988855554333221 211000 00
Q ss_pred -CCCc--------cchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHH
Q 018814 262 -FPYL--------LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQ 332 (350)
Q Consensus 262 -~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~ 332 (350)
+..+ ..+.....+....+...+.|++.....+..|+++-.+...++.....+++.....| .+...|+.|+
T Consensus 244 ~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E-~f~llqilGF 322 (372)
T KOG3912|consen 244 VLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE-YFHLLQILGF 322 (372)
T ss_pred chhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH-HHHHHHHHHH
Confidence 0000 01111112222222233466666677899999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHhhh
Q 018814 333 LLGFLGSGLYAY 344 (350)
Q Consensus 333 ~li~~g~~~~~~ 344 (350)
++.+.|.++|+.
T Consensus 323 liLi~Gi~lY~~ 334 (372)
T KOG3912|consen 323 LILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHH
Confidence 999999999983
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.76 E-value=1.3e-16 Score=141.06 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=169.4
Q ss_pred chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc
Q 018814 117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL 196 (350)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 196 (350)
++++..++...+++|...+.+.+.++++++++++++++.+..++|++++++++|||+++++|.++++.++|+.+...++.
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 34667778888999999999999999999999999999999999999999999999999999999999999998532211
Q ss_pred -----------------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh
Q 018814 197 -----------------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT 259 (350)
Q Consensus 197 -----------------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 259 (350)
.....|.++.++++++.|+..++.||+.|+.+.+.+.........+.++.++.... .|....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~ 171 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAI 171 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence 11258999999999999999999999999877666666666677777766655433 233222
Q ss_pred hcCC--CccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHH
Q 018814 260 INFP--YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLL 334 (350)
Q Consensus 260 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~l 334 (350)
.+.. ..++...|..++..++.|.... ..+|+.+...-+....+..+.+.++++.+||. ++|....+|.++
T Consensus 172 ~~~g~f~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~-~~s~~f~lg~~~ 243 (244)
T PF04142_consen 172 SESGFFHGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGF-PPSLSFLLGAAL 243 (244)
T ss_pred ccCCchhhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CCchHHhhheec
Confidence 2211 2234445566666666666655 45699999999999999999999999999998 999999999765
No 29
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.74 E-value=3.5e-15 Score=130.58 Aligned_cols=278 Identities=14% Similarity=0.083 Sum_probs=207.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcc--ccccccCCCCccCCCCCCccchH
Q 018814 42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWK--IINFTMGDSLMTSDSSSTFVPLK 119 (350)
Q Consensus 42 ~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
.+|.+.++..++.+....++.|.+-. . ++..+...|.+-+.+.+....... .+.+.+ ...+.+
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~-~---~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-----------~~~~p~ 70 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEP-L---PATEILAHRVIWSFPFMLALLFLLRQWRELKQ-----------LLKQPK 70 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcc-C---CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-----------HHhCcH
Confidence 46677777777888888888898865 3 788999999998887765543321 111111 001224
Q ss_pred HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccc
Q 018814 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD 199 (350)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~ 199 (350)
.+......++....+...+.+|.+.-.+-.++.=....|++.++++++++|||+++.+|++++++.+||..-.....+++
T Consensus 71 ~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp 150 (293)
T COG2962 71 TLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP 150 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 55556666788999999999999999999999999999999999999999999999999999999999998777667777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
+. ++.=+++|++|-.. ||.. +.++.+-.......-.|..+.+....++..+ +....+...+..+...|.
T Consensus 151 wv----al~la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~ 219 (293)
T COG2962 151 WV----ALALALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGL 219 (293)
T ss_pred HH----HHHHHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhH
Confidence 55 44456788888766 5544 4667776655555555555544444333221 111123445677777777
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.+.+-=.....+-++.+=.+.++..|++|...-+++++++|| +++..+.+..+.+-.|.++|..+.
T Consensus 220 vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E-~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 220 VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGE-PFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 665543333477899999999999999999999999999999 999999999999999999998643
No 30
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.1e-14 Score=130.97 Aligned_cols=225 Identities=16% Similarity=0.146 Sum_probs=179.5
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC--
Q 018814 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-- 195 (350)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-- 195 (350)
+++..+....++.|.+.+.+++.++.+.+++++++...+..+.|+++..++++||+++++|.++++.++|+.+...+.
T Consensus 89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 445666777799999998999999999999999999999999999999999999999999999999999999854111
Q ss_pred ---------cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh--hcCCC
Q 018814 196 ---------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT--INFPY 264 (350)
Q Consensus 196 ---------~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~ 264 (350)
.+..+.|....+.++++.++..++.+|+.|+.+.+.+-...-...++.++.+...... |.... ..+-.
T Consensus 169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~ 247 (345)
T KOG2234|consen 169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFY 247 (345)
T ss_pred CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccc
Confidence 1233689999999999999999999999987665555555555566666655444333 33322 12223
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 265 LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
.++...|..++..++-|...++. +|+.+...-+....+..+++.+.|+.+|+. ++|....+|..+++.++.+|..
T Consensus 248 G~s~~vw~vVl~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~-~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 248 GYSSIVWLVVLLNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDF-QLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred cccHHHHHHHHHHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccC-CchHHHHHHHHHHHHHHHHhhc
Confidence 35666788888888877777644 588888777788888899999999888887 9999999999999999999996
Q ss_pred heec
Q 018814 345 YKLV 348 (350)
Q Consensus 345 ~~~~ 348 (350)
.+.+
T Consensus 323 ~P~~ 326 (345)
T KOG2234|consen 323 YPAR 326 (345)
T ss_pred CCcc
Confidence 5543
No 31
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.71 E-value=2.7e-16 Score=129.89 Aligned_cols=142 Identities=32% Similarity=0.516 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-----CCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCC-----c-cchhH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKS-----SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPY-----L-LSPGF 270 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~-~~~~~ 270 (350)
|.++++.|.++.|+++++.|+..++ .+.++.++.+|+++.+.+.++|.++..+++........ . .+...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999887 68999999999999999999999888876542221111 1 14466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
+..++..|++++..|++.+.+++++||.+.++.+.+|.+..+++|+++||| ++|..+++|.++.++|+.+|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~-~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGE-PITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCC-cCCHHHHHHHHHHHHHHheeeC
Confidence 788999999999999999999999999999999999999999999999999 9999999999999999999975
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.3e-15 Score=131.35 Aligned_cols=255 Identities=20% Similarity=0.286 Sum_probs=191.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhhhhcc-cchhHHH
Q 018814 73 CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRG-VNVPMYT 151 (350)
Q Consensus 73 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~s~~~ 151 (350)
....+++.|+++-..--++.. -++. ..+.++|+|++.. .-..++..+.++|+++++ +|.+...
T Consensus 32 sgNLITFaqFlFia~eGlif~----skf~---------~~k~kiplk~Y~i---~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 32 SGNLITFAQFLFIATEGLIFT----SKFF---------TVKPKIPLKDYAI---TVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred CeeehHHHHHHHHHHhceeee----cccc---------ccCCCCchhhhhe---ehheeeeeeeeccceeeecccceEEE
Confidence 456789999986543222111 0111 0112366665443 234556677899999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec---cCccc--------------c--hhHHHHHHHHHHH
Q 018814 152 TLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSF--------------D--FFGYAVVFLANIT 212 (350)
Q Consensus 152 ~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~---~~~~~--------------~--~~G~~l~l~sa~~ 212 (350)
++|+-+++-++++++++.|+|++.+++.++.+..+|+++.+. .|... . ..|+.+...+.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998532 22110 0 3688888899999
Q ss_pred HHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHH-HHhccchhhhcCC-------CccchhHHHHHHHHHHHHHHH
Q 018814 213 TAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGDLETTINFP-------YLLSPGFLVVLCFSCILAFFL 284 (350)
Q Consensus 213 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~ 284 (350)
.|...++++..-++++-++-|.++|....+.|+.+... -...++...+..+ ...-+..|..++.+.+..++.
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C 255 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC 255 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence 99999999999998888999999999998888765432 1111222222211 112355677788887776665
Q ss_pred HHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 285 ~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
--..+....++++.++++.-.++..++.++|.+.|++ +++++.|+|.++++.|.++|+-
T Consensus 256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N-pft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN-PFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 5555677789999999999999999999999999988 9999999999999999999973
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.43 E-value=1.3e-13 Score=117.80 Aligned_cols=259 Identities=14% Similarity=0.113 Sum_probs=188.2
Q ss_pred HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHH
Q 018814 58 LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV 137 (350)
Q Consensus 58 ~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (350)
..+.+.++-.+ +.+.|..-++.....-.++-..+..+++. .-...|++.+.+++.-.-.+++
T Consensus 33 ~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-----------------~~~~~~~hYilla~~DVEaNy~ 94 (336)
T KOG2766|consen 33 TAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRRK-----------------YIKAKWRHYILLAFVDVEANYF 94 (336)
T ss_pred chhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhhH-----------------HHHHHHHHhhheeEEeecccEE
Confidence 34455666554 45677766666555444443333333321 1124577788888777777888
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--------ccchhHHHHHHHH
Q 018814 138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--------SFDFFGYAVVFLA 209 (350)
Q Consensus 138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~s 209 (350)
-..|.||++....+.+-+-..+.+++++++++|.|+++.++.|+.+++.|++++...|. +...+|+++.+.+
T Consensus 95 vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~G 174 (336)
T KOG2766|consen 95 VVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAG 174 (336)
T ss_pred EeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEec
Confidence 88999999999999999999999999999999999999999999999999999765542 2336899999999
Q ss_pred HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-
Q 018814 210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI- 288 (350)
Q Consensus 210 a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 288 (350)
|-+||..++..+.+.| +.+..+++....+++.+...+-.+.. -.+.... .++......+ . ..++.+.-|+.
T Consensus 175 ATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~--~~~~~tl--~w~~~i~~yl-~-f~L~MFllYsl~ 246 (336)
T KOG2766|consen 175 ATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFE--RHHVSTL--HWDSAIFLYL-R-FALTMFLLYSLA 246 (336)
T ss_pred ceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhh--ccceeeE--eehHHHHHHH-H-HHHHHHHHHHhh
Confidence 9999999999999988 67889999888888888877653322 1111111 1222221111 1 22233333333
Q ss_pred HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 289 ~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
-..+|..+++.+++.-......+.++ -.||- +.+|...+.++.+..|.++|.-+
T Consensus 247 pil~k~~~aT~~nlslLTsDmwsl~i--~~FgY-hv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 247 PILIKTNSATMFNLSLLTSDMWSLLI--RTFGY-HVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HHheecCCceEEEhhHhHHHHHHHHH--HHHhc-chhhhhHHHHHHHHHhhEEeecc
Confidence 36788899998888777778888777 67888 99999999999999999999643
No 34
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.35 E-value=1.2e-11 Score=94.80 Aligned_cols=135 Identities=12% Similarity=0.077 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (350)
..+++++|++++++..++.|--.+ +.||..-+..-++....++..+...+|.+... ...+...|..+..+|+.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~ 77 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAG 77 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHH
Confidence 468999999999999999888777 67888888888888888888888888875432 234566688999999888
Q ss_pred HHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 282 FFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
-...++.|++++...+..+...+-..+++++++|++++|| ++|..+++|++++..|..+.+
T Consensus 78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E-~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGE-RLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhCeeeEe
Confidence 8888888999999999999999999999999999999999 999999999999999987764
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.26 E-value=4.3e-11 Score=105.10 Aligned_cols=192 Identities=16% Similarity=0.122 Sum_probs=123.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--------------------C-------cc
Q 018814 145 VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR--------------------D-------LS 197 (350)
Q Consensus 145 ~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--------------------~-------~~ 197 (350)
++++.....++..++++++......+||++..++++..+...|+...... + .+
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 45677778888888888888888888888888888888888887642111 1 01
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCC--CccchhHHHHHH
Q 018814 198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFP--YLLSPGFLVVLC 275 (350)
Q Consensus 198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 275 (350)
....|....+.+..+.++..++.++..++.+.+.+.........+.+....... ..+.....+.+ ..++...|..++
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLL-WSDGTLISNFGFFIGYPTAVWIVGL 160 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHh-hcccchhhccCcccCCchHHHHHHH
Confidence 235677777778888888888988887643322222222222222222111111 11111111111 112233333333
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHh
Q 018814 276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLY 342 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~ 342 (350)
. ....+.+..+.+|+.++.+.++...++++++.++|+++||| +++..++.|..+++.|+++|
T Consensus 161 ~----~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~-~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 161 L----NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDA-KISSTFYLGAILVFLATFLY 222 (222)
T ss_pred H----HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHeeeEeC
Confidence 3 33333445578899999999999999999999999999999 99999999999999998765
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.25 E-value=2.7e-11 Score=99.79 Aligned_cols=220 Identities=15% Similarity=0.121 Sum_probs=158.1
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC--ccc
Q 018814 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD--LSF 198 (350)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--~~~ 198 (350)
+++..|.++++.+.++.+..+++.++++.++.+..+.-.|+.+++++++++|+...++.+.++++.|++++...| ...
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 445678888999999999999999999999999999999999999999999999999999999999999987554 345
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHH---H-HHHHH--HHHHhccchhhhcCCCccchhHHH
Q 018814 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC---G-PLLLL--WTFLRGDLETTINFPYLLSPGFLV 272 (350)
Q Consensus 199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~-~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~ 272 (350)
++.|+..++.|+...|+|-+..|+...+.+..... -++...+ . ....| ...+++ .++...+.. .-|.
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa--~FmS~LGF~NL~~~~~~~lIL~~T~-VE~~qsFA~----~PWG 205 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAA--HFMSCLGFFNLCFISFPALILAFTG-VEHLQSFAA----APWG 205 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHH--HHHHHHHHHHHHHHhhhHHHHHHhc-hHHHHHHhh----CCch
Confidence 78999999999999999999999998754443322 1111111 1 11111 112222 111111211 1245
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814 273 VLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~ 348 (350)
.++..+.+...+|+.....+..+.|...|+=........... .+++.|...+...+.|..++.+|.++....+.+
T Consensus 206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~Naai-DiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAI-DILFQELEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHH-HHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence 666666677777777777777777877766333333333333 456777688999999999999999887654433
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.14 E-value=2e-10 Score=90.90 Aligned_cols=120 Identities=15% Similarity=0.183 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHH-HHHH
Q 018814 56 VLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLY 134 (350)
Q Consensus 56 ~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 134 (350)
.....++|...++. +|...+++|+..+.+ +.........+. ....+.+++......+.+ ....
T Consensus 4 a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 67 (126)
T PF00892_consen 4 AIYSVFSKKLLKKI---SPLSITFWRFLIAGI-LLILLLILGRKP------------FKNLSPRQWLWLLFLGLLGTALA 67 (126)
T ss_pred eeHHHHHHHHhccC---CHHHHHHHHHHHHHH-HHHHHHhhcccc------------ccCCChhhhhhhhHhhccceehH
Confidence 34455779999875 788899999999987 444433222210 112445666777777754 6889
Q ss_pred HHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 135 ~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
..+++.++++++++..+.+.++.|+++.+++++++||+++++++.|+++++.|+.+.
T Consensus 68 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 68 YLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998763
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.13 E-value=5.6e-10 Score=88.34 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH-HHHHHHHH
Q 018814 211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA-FFLNYSIF 289 (350)
Q Consensus 211 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~ 289 (350)
++||.+.+..|+..+ +.++.+..++....+.+ +.+.....+... ....+...+......++++ ...+...+
T Consensus 1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF 72 (126)
T ss_pred ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence 367889999999988 58999999999999987 655555443321 1122333445566666665 44555557
Q ss_pred HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 290 ~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
+++++.++...++..+++|+++.++++++++| ++++.+++|++++++|+.+..
T Consensus 73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e-~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 73 YALKYISASIVSILQYLSPVFAAILGWLFLGE-RPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999998764
No 39
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.08 E-value=1.4e-09 Score=83.58 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhh
Q 018814 47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLP 126 (350)
Q Consensus 47 ~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (350)
.+++-..+.....+..|..++.. .|.+-+..|.++....+.......+.... ...++.|.|..+..
T Consensus 7 ~ALLsA~fa~L~~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~~~-----------~~~~~~k~~lflil 72 (140)
T COG2510 7 YALLSALFAGLTPIFAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNWQA-----------GGEIGPKSWLFLIL 72 (140)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCceec-----------ccccCcceehhhhH
Confidence 33444444445556889999977 67888999999888777665553322111 11145567777777
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 127 ~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
-|+.-.+++.++|.|++.-++|-..-+-.++|+++.+++++++|||++.++|+|++++.+|+.+..
T Consensus 73 SGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 73 SGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 778889999999999999999999999999999999999999999999999999999999998864
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.01 E-value=6.9e-10 Score=86.70 Aligned_cols=108 Identities=11% Similarity=0.117 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHH-HHHHHHhhhhhcccchhHHHHHHHHH
Q 018814 79 LLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTT 157 (350)
Q Consensus 79 ~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~s~~~~l~~~~ 157 (350)
.+|+.++.+++......+++ .++. .+...++.+......|+.. ..+..+++.|+++.+ +....+.+++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~ 70 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGR-LRDL---------FRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLS 70 (113)
T ss_pred HHHHHHHHHHHHHHHHHHcc-HHHH---------HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence 46788887777665443221 1100 1112224445556666544 488899999999999 6888999999
Q ss_pred HHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcc
Q 018814 158 VAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS 197 (350)
Q Consensus 158 p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~ 197 (350)
|+++++++++++|||++++++.+++++++|++++..+|.+
T Consensus 71 pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 71 PIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999998776654
No 41
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.92 E-value=5.6e-08 Score=87.24 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh-hcCCCccchhHHHHHHHHHH
Q 018814 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 279 (350)
.|..+.++++++|+...+..|. .. +.++.++.++...++.+++.++....++.... .+.........+..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 5889999999999999999987 44 58999999999999988877765444432111 01111111222345666666
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
+......+.+.+++++++...++..+..|++++++++++++| +++..+++|.++.++|+.+..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~E-k~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKE-RISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence 655566666799999999999999999999999999999999 999999999999999988654
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.89 E-value=9.7e-08 Score=87.61 Aligned_cols=139 Identities=13% Similarity=0.069 Sum_probs=105.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC 278 (350)
Q Consensus 199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (350)
...|.++.++++++|+...+..|.. . +++|.++.++...++.+++.+.....++....... ..+...+......+
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 80 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLAVSA 80 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHHHHH
Confidence 3589999999999999999999764 4 58999999999999988777665544332211100 01222222223333
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 279 ILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
+.....+.+.+++++++++...++..+..|++..++++++++| +++..+++|.++.+.|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E-~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGE-RFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHH
Confidence 3333445555799999999999999999999999999999999 999999999999999998764
No 43
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.82 E-value=5.9e-07 Score=79.68 Aligned_cols=209 Identities=11% Similarity=0.077 Sum_probs=150.7
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhceeeec
Q 018814 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVAGA 193 (350)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~~ 193 (350)
+.+...+..|+++...+..++.+.++..+|.+--+ ...+.+.+.+.+.++++|--+..++ .++++.++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 56666677779999999999999999999965544 4788899999999999998886665 488889999998654
Q ss_pred cCcc--------cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCc
Q 018814 194 RDLS--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYL 265 (350)
Q Consensus 194 ~~~~--------~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 265 (350)
.|.+ ....|....+++.+.|..|.+..|-. +.++++...=+++--.+....+.....+ ...
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~----- 191 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKK--PFF----- 191 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccc--ccc-----
Confidence 4321 22579999999999999999987663 4678887766644333322233222211 011
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchh----hHHHHHHHHHHHHH
Q 018814 266 LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFL----NVFGQLLGFLGSGL 341 (350)
Q Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~----~~~G~~li~~g~~~ 341 (350)
+... +.=+..|++=-..|.+.+.+.++.+..+.=.++-+..+.+++.|.+++|| +-+.. .++|.+++++|.++
T Consensus 192 -~k~~-~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E-~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 192 -EKKS-WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKE-KKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred -ccch-HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEe-cCchhhHHHHHHHHHHHHHhhhc
Confidence 1111 23345555555566666777888888888888999999999999999999 65644 56788888888754
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.82 E-value=1.9e-07 Score=84.98 Aligned_cols=133 Identities=13% Similarity=0.120 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
..+.+.+++++|...+.+|+..++ .++. ..+....+.+.+.|+....... .... ..+...+..+...++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~ 74 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQ---VGWS-RLPATFWLLLAISAVANM 74 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhccc---CCCC-CcchhhHHHHHHHHHHHH
Confidence 578899999999999999988763 2333 4555566666666655432100 0111 112233445556666666
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
....+.+++.++.++...++..+..|+++.+++++++|| +++..+++|.++++.|+.+...
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e-~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGE-TLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHhc
Confidence 667777899999999999999999999999999999999 9999999999999999987654
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.77 E-value=2.9e-07 Score=82.67 Aligned_cols=133 Identities=12% Similarity=0.007 Sum_probs=99.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHH
Q 018814 42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121 (350)
Q Consensus 42 ~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (350)
.++...+++-.++.....++.|...++.+. .+..+..+|+.++.+++.+.......+. ..+.+++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~~ 191 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPNP--------------QALSLQW 191 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------CcchHHH
Confidence 345666666666667777788998876521 1344555788888887766655322110 0234566
Q ss_pred HHHhhHHH-HHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814 122 MHTLPLAV-AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF 189 (350)
Q Consensus 122 ~~~~~~~~-~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~ 189 (350)
...+..++ .......+++.++++.+++.++.+.++.|++++++++++++|+++..++.|..+++.|+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 65666664 456788899999999999999999999999999999999999999999999999999863
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.66 E-value=5.7e-07 Score=82.16 Aligned_cols=212 Identities=15% Similarity=0.118 Sum_probs=124.4
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee-ccC---cccch----
Q 018814 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-ARD---LSFDF---- 200 (350)
Q Consensus 129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~-~~~---~~~~~---- 200 (350)
+.+.++..+.+.|+.+.|.+..+-+..+..++.++++..++|||++++++.|+.++++|..++. ..+ ...+.
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 5567778899999999999999999999999999999999999999999999999999998742 211 11110
Q ss_pred -----hHHH-HH-HHHHHHHHHHHHHHHHhhccCCCChhhHHHHHH---HHHHHHHHH---HH-HHhccchhhhcCCCcc
Q 018814 201 -----FGYA-VV-FLANITTAIYLATIARIGKSSGLNSFGLMWCNG---VICGPLLLL---WT-FLRGDLETTINFPYLL 266 (350)
Q Consensus 201 -----~G~~-l~-l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~---~~-~~~~~~~~~~~~~~~~ 266 (350)
.+++ +. +...+...+.....+|..+ ..+..|.. .++..-.+. .. .+..... ..+...
T Consensus 138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~------~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~---g~~~f~ 208 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLVLILILIFFIKPRYGR------RNILVYISICSLIGSFTVLSAKAISILIKLTFS---GDNQFT 208 (300)
T ss_pred HHhcCcceehhHHHHHHHHHHHHHhhcchhcc------cceEEEEEEeccccchhhhHHHHHHHHHHHHhc---Cchhhh
Confidence 1111 11 1111111111111112111 11122211 111111000 00 1000000 111123
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh-HHHHHHHHHHHHhCCC-Ccch----hhHHHHHHHHHHHH
Q 018814 267 SPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL-KDLFTIGLGWILFGGL-PFDF----LNVFGQLLGFLGSG 340 (350)
Q Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~-~~v~~~~ls~~~~~e~-~~t~----~~~~G~~li~~g~~ 340 (350)
.+..|..++....+....-+..++++++.+++.+....+. -...+++-|.++|+|. .++. ....|+.+++.|++
T Consensus 209 ~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~ 288 (300)
T PF05653_consen 209 YPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVF 288 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhh
Confidence 3445556555555666666677899998888665544443 3455667778888873 3555 34568888999999
Q ss_pred HhhhheecC
Q 018814 341 LYAYYKLVG 349 (350)
Q Consensus 341 ~~~~~~~~~ 349 (350)
+.+..|..+
T Consensus 289 lL~~~~~~~ 297 (300)
T PF05653_consen 289 LLSSSKDKE 297 (300)
T ss_pred eeeccCchh
Confidence 987666543
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.55 E-value=4.1e-06 Score=78.58 Aligned_cols=138 Identities=15% Similarity=0.205 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280 (350)
Q Consensus 201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (350)
.-....+..-++|+.+.++.|...+ .++++....+|-..+++++++++....+.. ...+ ..+...+..+...|++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~---~~~~-~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRS---RSLP-PLSVSILSKIGLLGFL 87 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHh---cccC-cchHHHHHHHHHHHHH
Confidence 4556778888999999999999885 489999999999999998888876543210 0011 1123344566667777
Q ss_pred HHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH------hCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 281 AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL------FGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 281 ~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~------~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
+...+...+..+++++|...+++.+..|+++.++++++ ++| +++..+++|.++.+.|+.+...
T Consensus 88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~e-r~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE-RSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcc-cccHHHHHHHHHHHHHHHHHHH
Confidence 74444456789999999999999999999999999999 699 9999999999999999987553
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.45 E-value=9.8e-06 Score=64.41 Aligned_cols=124 Identities=11% Similarity=0.050 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280 (350)
Q Consensus 201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (350)
.|+++.+.+.++.+..++..|+=.++.+ ..+.... . ..... .. .++ ...+..|+.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~~-~-~~~~~----~~--------------~~p---~~~i~lgl~ 56 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAWD-F-IAALL----AF--------------GLA---LRAVLLGLA 56 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC--CccchhH-H-HHHHH----HH--------------hcc---HHHHHHHHH
Confidence 4788999999999999999998776432 2221111 0 00000 00 000 124556666
Q ss_pred HHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHH--HhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814 281 AFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWI--LFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350 (350)
Q Consensus 281 ~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~--~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~ 350 (350)
++..++.. ..++++.+...+.......++...+.++. +||| ++|+.+++|.+++++|+++.++.++++|
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E-~ls~~~~iGi~lIi~GV~lv~~~~~~~~ 128 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE-TFSLKKTLGVACIMLGVWLINLPTTKAR 128 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 66666655 58889999999888888887777777774 8999 9999999999999999999987666553
No 49
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.40 E-value=1.1e-05 Score=71.30 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=114.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHH
Q 018814 198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS 277 (350)
Q Consensus 198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (350)
.+..|+++++.+-+.|++.-.+.|-+. +.++.++..+-.+.+.+++.........+.+..+ ...++..+..+...
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~ 78 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALT 78 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHH
Confidence 345899999999999999999987765 5789999999999999999887777776665544 23345455555555
Q ss_pred HHHHHHHHHHHH-HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 278 CILAFFLNYSIF-LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
++. ...|...| +++.+......|.=.++.|++.+++|.++++| .++..|++..++..+|+..-.+.
T Consensus 79 a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkE-rls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 79 ALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKE-RLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Confidence 543 44555554 89999999999999999999999999999999 99999999999999999876654
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.36 E-value=1.1e-05 Score=73.87 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
.+.+.++.-.++....+++.|...++. .|.... ++..++.+++.+........ ...+...+.
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~---~~~~~~-~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~ 209 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGAEH---GPATVA-IGSLIAALIFVPIGALQAGE--------------ALWHWSILP 209 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC---CchHHH-HHHHHHHHHHHHHHHHccCc--------------ccCCHHHHH
Confidence 355566666666666677778876654 455444 44455554444433321110 002233343
Q ss_pred HHhhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 123 HTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 123 ~~~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
..+..+ ++..+...+++.++++++++.++.+..++|++..++++++++|+++..+++|..++++|+....
T Consensus 210 ~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 210 LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 344556 4456677799999999999999999999999999999999999999999999999999998753
No 51
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.30 E-value=2.2e-05 Score=64.39 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccchH
Q 018814 46 NAAISYMACAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLK 119 (350)
Q Consensus 46 ~~~l~~~~~~~~~~~~~K~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
..++...++...-.++.|..+++ .+. .+..+.......+.+++.+.... +..+..+..... ...+...+.+
T Consensus 3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~--~~~~~~~~~~ 79 (153)
T PF03151_consen 3 ILALASSLFSALRNVLIKKLLKKVSSNSKKL-NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEI--FGEELSSDPN 79 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccCC-CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHh--hhhhhcchHH
Confidence 34455556666666777888876 344 46667666666666666554332 222211100000 0000001234
Q ss_pred HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
.+...+..|+...+.++..+..++++++-+++++.+...+.+.+++.++++|+++..++.|+.+.++|+.+.
T Consensus 80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 455566666888889999999999999999999999999999999999999999999999999999999764
No 52
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.29 E-value=4.8e-05 Score=71.43 Aligned_cols=138 Identities=11% Similarity=0.091 Sum_probs=105.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCcc-chhHHHHHHH
Q 018814 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLN-SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLL-SPGFLVVLCF 276 (350)
Q Consensus 199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 276 (350)
+..-..+.+..=.+...+.++.|.+.+ ..+ |+.+..++..++.+++...... + ... .+... ....+..++.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~---~~~~~~~~~~~~~llp 119 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWAT-G-FRK---IPRIKSLKLFLKNFLP 119 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHh-C-CCC---CCCCCCHHHHHHHHHH
Confidence 344555666666666777888999987 456 9999999999987766544321 1 111 11111 1234567778
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 277 SCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
.|++++......+.+++.+++..+++.....|++++++++++++| +++..++.|.+++++|+.+...
T Consensus 120 ~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~e-k~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 120 QGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQ-FLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHheec
Confidence 888887776666788999999999999999999999999999999 9999999999999999988653
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.27 E-value=2.5e-05 Score=71.72 Aligned_cols=144 Identities=14% Similarity=0.034 Sum_probs=96.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
.+.+.++.-.+++...+++.|...++.+-+.......++.+.+.+.................+ ....+.+.+.
T Consensus 143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 215 (299)
T PRK11453 143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS-------LVTIDMTTIL 215 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh-------hccCCHHHHH
Confidence 455566666666666666778765543212233445555555544333322211100000000 0113456677
Q ss_pred HHhhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 123 HTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 123 ~~~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
.++..+ +.......+++.++++.+++.++.+..+.|++..++++++++|+++..+++|..++++|+.+...
T Consensus 216 ~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 216 SLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 777777 55566778999999999999999999999999999999999999999999999999999987543
No 54
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.22 E-value=2.3e-05 Score=71.90 Aligned_cols=131 Identities=9% Similarity=-0.005 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (350)
Q Consensus 44 ~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (350)
+.+.+++-.+++...++++|..-+++ .+.... ... +.+.+.+....... + ....+.+.+..
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~~~---~~~~~~--~~~-~~~~l~~~~~~~~~--~-----------~~~~~~~~~~~ 217 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYARGK---NGITLF--FIL-TALALWIKYFLSPQ--P-----------AMVFSLPAIIK 217 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC---CchhHH--HHH-HHHHHHHHHHHhcC--c-----------cccCCHHHHHH
Confidence 45555566666666666778876544 344332 222 22222222221110 0 01134455665
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
.+..++......++++.++++.+++..+.+.++.|++..++++++++|+++..++.|.++++.|+.+...
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 6666666677788999999999999999999999999999999999999999999999999999977543
No 55
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.18 E-value=0.00011 Score=67.21 Aligned_cols=129 Identities=18% Similarity=0.128 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHH
Q 018814 204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFF 283 (350)
Q Consensus 204 ~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (350)
+..+.-.+.|+...+..|...+ +.+|.+...+-..+++++++++....+.. . .+...+......|.+...
T Consensus 11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~---~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-----L---PTLRQWLNAALIGLLLLA 80 (292)
T ss_pred HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-----C---CcHHHHHHHHHHHHHHHH
Confidence 4456778899999999998776 78999999999999988887765533211 1 112234444555655433
Q ss_pred -HHHHHHHHh-hccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 284 -LNYSIFLNT-TLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 284 -~~~~~~~~~-~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
.+...+.+. ++.++...++..+..|+++.+++++ ++| +++..+++|.++.++|+.+...
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e-~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGI-RTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcc-cCchhHHHHHHHHHHhHHHHhc
Confidence 333445666 8889999999999999999999985 799 9999999999999999987753
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.17 E-value=4.9e-05 Score=59.16 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHH
Q 018814 238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF-FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGW 316 (350)
Q Consensus 238 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~ 316 (350)
...++.+.+..+....++..+..... .+ .-+..++..|+++. ..+...+.+.++.++ .+++...+.|+++.++|+
T Consensus 4 r~~~~~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 4 RYLFSVLFLLIILLIRGRLRDLFRAL--RR-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHH--Hh-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence 34455666665555544433221111 11 11234555566665 334444688898885 777889999999999999
Q ss_pred HHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814 317 ILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 317 ~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~ 347 (350)
++++| +++..++.|.+++++|+.+..+...
T Consensus 80 ~~~~e-r~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 80 LFFKE-RLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHhcC-CCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999 9999999999999999999877543
No 57
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.16 E-value=9.4e-06 Score=62.90 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
.++....++...+++.+|++.+-.+-++.++++.+.+++++|||+++++++|+.++++|+.++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5677888999999999999999999999999999999999999999999999999999998743
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.11 E-value=0.00015 Score=66.60 Aligned_cols=125 Identities=11% Similarity=0.002 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 018814 211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFL 290 (350)
Q Consensus 211 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 290 (350)
++...++++.|...++. ..|..+..++..++.+...+... .+.. . ....+...+..++..|++........+.
T Consensus 12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (302)
T TIGR00817 12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLP----K-RLKISSALLKLLLPVAIVHTIGHVTSNV 84 (302)
T ss_pred HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCC----C-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556778888742 45888888888877666544311 1110 0 1112233456667777776555556679
Q ss_pred HhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 291 NTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 291 ~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
+++++++...++.....|+++.++++++++| +++..++.|.+++++|+.+..
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e-~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQ-EFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999 999999999999999997654
No 59
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.04 E-value=0.0044 Score=57.45 Aligned_cols=226 Identities=11% Similarity=0.072 Sum_probs=135.2
Q ss_pred chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhcccc---Cc----chhhhHHHhhhhc
Q 018814 117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKY---TP----PVVGSVGLIILGA 188 (350)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~~~~e~~---~~----~~~~~~~l~~~Gv 188 (350)
+.+.+...+..|+++...+..+..+.++..+|...-+. .++.++..++..++++|-. +. .-..++++.++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 34566667777899999999999999999999766544 7888888899888988643 32 2457888889999
Q ss_pred eeeec----cCc---------ccchhHHHHHHHHHHHHHHHH-------HHHHHhhccCCCChhhHHHHHHH---HHHHH
Q 018814 189 FVAGA----RDL---------SFDFFGYAVVFLANITTAIYL-------ATIARIGKSSGLNSFGLMWCNGV---ICGPL 245 (350)
Q Consensus 189 ~l~~~----~~~---------~~~~~G~~l~l~sa~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 245 (350)
++... .|. ....+|++++++|.+.++.|. ...+... +.+.++.....-+.. ++...
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHH
Confidence 88544 221 122589999999999999998 3333221 224455443333322 33332
Q ss_pred HH-HHHHH---h-ccchhhhcCCCccc--hhHHHHHHHHHHHHHHHHHHHHHHhhccchhH----HHHhhhhHHHHHHHH
Q 018814 246 LL-LWTFL---R-GDLETTINFPYLLS--PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVT----QTICGNLKDLFTIGL 314 (350)
Q Consensus 246 l~-~~~~~---~-~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~----~sv~~~~~~v~~~~l 314 (350)
.- .+... . .++....+...... ..-.....+.|+.=...++......++.+... ..+.....-+++.+.
T Consensus 228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 22 22221 1 11110111110000 11123334444444444444445555553322 223335555888888
Q ss_pred HHHHhCCCCcc------hhhHHHHHHHHHHHHHhhhh
Q 018814 315 GWILFGGLPFD------FLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 315 s~~~~~e~~~t------~~~~~G~~li~~g~~~~~~~ 345 (350)
|. +++| .-+ ...++|.+++++|..+....
T Consensus 308 Gi-~lkE-~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GL-VLKE-WKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hh-hhhh-ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 87 5999 555 66789999999999887653
No 60
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.89 E-value=0.00015 Score=65.08 Aligned_cols=215 Identities=15% Similarity=0.021 Sum_probs=128.7
Q ss_pred H-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc---c-cc---
Q 018814 128 A-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---S-FD--- 199 (350)
Q Consensus 128 ~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---~-~~--- 199 (350)
| +.+.++-..+|.|..+-|.+..+-+.+++.+..++++..+++||+++...+|+.++++|..++..... + .+
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e 149 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE 149 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence 5 67888889999999999999999999999999999999999999999999999999999988533211 1 01
Q ss_pred ------hhHHHHHHHH-HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHH--hccc--hhhhcCCCccch
Q 018814 200 ------FFGYAVVFLA-NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDL--ETTINFPYLLSP 268 (350)
Q Consensus 200 ------~~G~~l~l~s-a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~--~~~~~~~~~~~~ 268 (350)
-.+++.=..- .....+-..+.+ + +.....++.|..+.+.+..+-..-. .|+. ......+....+
T Consensus 150 l~~~~~~~~Fliy~~~iil~~~il~~~~~---p--~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~ 224 (335)
T KOG2922|consen 150 VWELATEPGFLVYVIIIILIVLILIFFYA---P--RYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYP 224 (335)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHheeec---c--cccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccH
Confidence 0121111111 111111111111 1 1222234444444443321100000 0000 001111222334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh-HHHHHHHHHHHHhCCC-Ccchh----hHHHHHHHHHHHHHh
Q 018814 269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL-KDLFTIGLGWILFGGL-PFDFL----NVFGQLLGFLGSGLY 342 (350)
Q Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~-~~v~~~~ls~~~~~e~-~~t~~----~~~G~~li~~g~~~~ 342 (350)
..|..++....+........+++.+..++..++...++ =+.++++.|.++|.|- ..+.. .+.|+..++.|+++.
T Consensus 225 ~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL 304 (335)
T KOG2922|consen 225 LTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLL 304 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEe
Confidence 55666666666666666666788888777666555554 4566777888888763 23433 456888999999988
Q ss_pred hhhee
Q 018814 343 AYYKL 347 (350)
Q Consensus 343 ~~~~~ 347 (350)
+..|.
T Consensus 305 ~~~kd 309 (335)
T KOG2922|consen 305 HRTKD 309 (335)
T ss_pred eeecc
Confidence 65544
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.78 E-value=0.00054 Score=62.62 Aligned_cols=132 Identities=12% Similarity=0.068 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (350)
|++++++++++|+..-+..|+.. +.++.+.. ...++..+...+.....+ +.......+..-+..|+.=
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~g~l~G~~w 69 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVL-------PEFWALSIFLVGLLSGAFW 69 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhC-------CcccccHHHHHHHHHHHHH
Confidence 57889999999999999988865 44554443 344444444443332221 1111233444455555555
Q ss_pred HHHHHHHHHHhhccchhHHHHhhh-hHHHHHHHHHHHHhCCCCcchhh----HHHHHHHHHHHHHhhhhe
Q 018814 282 FFLNYSIFLNTTLNSAVTQTICGN-LKDLFTIGLGWILFGGLPFDFLN----VFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~a~~~sv~~~-~~~v~~~~ls~~~~~e~~~t~~~----~~G~~li~~g~~~~~~~~ 346 (350)
...|++.+.++++.+....-.+.+ ..++...+++.++||| +.+..+ ++|.+++++|+++....+
T Consensus 70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e-~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGE-WSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 556677889999988888766666 8888999999999999 999988 999999999999876543
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.73 E-value=0.0009 Score=51.80 Aligned_cols=63 Identities=11% Similarity=-0.052 Sum_probs=52.5
Q ss_pred HHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 280 LAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
+++...+.. ..++++.+...+...-++.++.+.++|+++||| ++|+.+++|.++++.|+....
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E-~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHE-PVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 334333333 477888998888777789999999999999999 999999999999999998765
No 63
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.66 E-value=0.0034 Score=50.60 Aligned_cols=132 Identities=22% Similarity=0.196 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (350)
Q Consensus 203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (350)
.++++.+.++.+++....-++.++.+ |++.-.+.+...+.+.+.......++. +. ....+..+|. ...|+++.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~---~~~~~~p~w~--~lGG~lG~ 75 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL---ASLSSVPWWA--YLGGLLGV 75 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc---chhccCChHH--hccHHHHH
Confidence 57788999999999999999987443 599999999999988888877776654 21 1122222222 33778887
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH--hCC--CCcchhhHHHHHHHHHHHHH
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL--FGG--LPFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~--~~e--~~~t~~~~~G~~li~~g~~~ 341 (350)
..-.+....+++.++...........+...++=.-+ ||. .++++.+++|.+++++|+.+
T Consensus 76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777777788899999888887777776665544432 322 27999999999999999863
No 64
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.66 E-value=0.0032 Score=56.95 Aligned_cols=139 Identities=21% Similarity=0.188 Sum_probs=94.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
..+....+..++.++......|...++ ..+......+....+.+...+.... +... ..+.. ...+...+..++
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~--~~~~~~~~~~~~ 78 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLL--EPRG--LRPAL--RPWLLLLLLALL 78 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHh--hccc--ccccc--cchHHHHHHHHH
Confidence 357778888889999998888888763 2455555555655555553222211 1000 01111 112234444444
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHH-HHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGW-ILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~-~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.....+...+.+++++++...++..+..|++..++++ ++++| +++..++.|..+.+.|+.+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~Gv~lv~~~~ 145 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE-RLSLLQILGILLALAGVLLILLGG 145 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHhHHheecCC
Confidence 4444555556889999999999999999999999997 66699 999999999999999998877543
No 65
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.65 E-value=0.00016 Score=57.53 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=61.8
Q ss_pred hhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHH--HhccccCcchhhhHHHhhhhceeeecc
Q 018814 125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYF--LAGQKYTPPVVGSVGLIILGAFVAGAR 194 (350)
Q Consensus 125 ~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 194 (350)
+..| .++.+..++++.+++..|++.+.-+.+..+.++.+.++. ++||++++++++|+.++++|+.++..+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4445 678888899999999999999999999998888888885 899999999999999999999986543
No 66
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.63 E-value=0.002 Score=59.32 Aligned_cols=123 Identities=14% Similarity=0.031 Sum_probs=90.0
Q ss_pred HHHHHHHHhhccCCCC--hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 018814 215 IYLATIARIGKSSGLN--SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNT 292 (350)
Q Consensus 215 ~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (350)
.+.+.++++.++...+ +..+++.|...+.+...+....... .+. +..-+.-....+++-.+.....+.++
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF------PKS--RKIPLKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc------cCC--CcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778887654445 6778888887777766655443320 000 11112333444555666666677889
Q ss_pred hccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 293 TLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 293 ~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
++.+-.+..+....+++..++++.+++|+ +.+..++.+.+++.+|+.+....+
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k-~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGK-RYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCc-cccHHHHHHHHHHHhhHheeeecc
Confidence 99999999999999999999999999999 999999999999999999987654
No 67
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.41 E-value=0.0016 Score=50.16 Aligned_cols=66 Identities=14% Similarity=0.266 Sum_probs=52.3
Q ss_pred HHHHHHHHH-HHHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 280 LAFFLNYSI-FLNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.++..++.. ..++++.+- ..+++..-+..+..++.|+++|+| ++|+.+++|+.++++|+...+..+
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e-~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 344444433 366777665 557777888999999999999999 999999999999999999987644
No 68
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.27 E-value=0.012 Score=54.53 Aligned_cols=138 Identities=13% Similarity=0.142 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 201 FGYAVVFLANITTAIYLATIARIGKSSGLN-SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
.+.+++=.-+++-+...+.++.+.++ +.+ |....+++.....++..+............ ......+|.. +..++
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~---~~~~~~~w~y-~lla~ 87 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL---KVLKRPWWKY-FLLAL 87 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch---hhcchhHHHH-HHHHH
Confidence 34444444445555555555555543 333 555555555443333333322211110000 0111222333 33478
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
+=...|+....+.++++.+.+.++.....+++.++|++++++ +.++.+++|+++.++|+.+...
T Consensus 88 ~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~-ry~~~~~~gv~i~i~Gv~lv~~ 151 (334)
T PF06027_consen 88 LDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKR-RYSWFHILGVLICIAGVVLVVV 151 (334)
T ss_pred HHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhheee
Confidence 888899999999999999999999999999999999999999 9999999999999999886553
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.24 E-value=0.0031 Score=47.70 Aligned_cols=55 Identities=20% Similarity=0.176 Sum_probs=49.0
Q ss_pred HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
+++|+.+- +.+++.+-+..+...+.|+++|+| ++|..+++|..++++|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E-~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE-SLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC-cCCHHHHHHHHHHHHHHHHhhhc
Confidence 66777765 668999999999999999999999 99999999999999999987653
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.20 E-value=0.0034 Score=49.03 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=47.5
Q ss_pred HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.++|+.+- ..+++..-+..+.+++.|+++||| ++|+.+++|++++++|+...+...
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E-~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDE-SLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHhhcCC
Confidence 56676654 556777788899999999999999 999999999999999998887533
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.011 Score=45.48 Aligned_cols=53 Identities=23% Similarity=0.311 Sum_probs=47.0
Q ss_pred HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
.++|+.+- +.+++..-+..+.+.+.|+++||| ++|+.+++|+++++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e-~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ-RLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhc
Confidence 66777765 668899999999999999999999 999999999999999998754
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.15 E-value=0.0014 Score=51.24 Aligned_cols=69 Identities=10% Similarity=0.175 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
...-+++..+.++...+++++|++.+-.+ ....-+.+.+.+.++++|+++..+++++.++++|+.....
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 34447788888999999999999966555 5789999999999999999999999999999999987543
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.10 E-value=0.0048 Score=47.05 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=47.9
Q ss_pred HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
.++|+.+- ..+++..-+..+.+.+.|+++||| ++|+.+++|+.++++|+...+.
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e-~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE-SASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHhhhc
Confidence 66776655 678999999999999999999999 9999999999999999988754
No 74
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.08 E-value=6.7e-05 Score=64.73 Aligned_cols=214 Identities=13% Similarity=0.135 Sum_probs=144.1
Q ss_pred cchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhcee
Q 018814 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFV 190 (350)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l 190 (350)
.+.+.+..-+.-|+++...+..++.|.+++.+|.+--+. .++.+-+-+++.+.+||-.+..+. .++++.+.|+.+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l 133 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL 133 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence 344555555666789999999999999999999776444 678888999999999998776553 678889999999
Q ss_pred eeccCc--------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH---HHHHHHHHHHHHHHhccchhh
Q 018814 191 AGARDL--------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN---GVICGPLLLLWTFLRGDLETT 259 (350)
Q Consensus 191 ~~~~~~--------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~ 259 (350)
-+..|. +.-..|....+.|.+.|-.|.+..|... .+.++...-| +.++++.+- ...+|.
T Consensus 134 Ts~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqAiGMv~~ali~~---~~~~~~--- 203 (288)
T COG4975 134 TSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQAIGMVIGALILG---FFKMEK--- 203 (288)
T ss_pred eeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc----ccchhhhhHHHHHHHHHHHHHh---hccccc---
Confidence 766552 1114788888889999999988877664 3445544433 334433321 111110
Q ss_pred hcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchh----hHHHHHHH
Q 018814 260 INFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFL----NVFGQLLG 335 (350)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~----~~~G~~li 335 (350)
. .....+.-+..|+.=-..|...+.+.++.+-.+.=.++-+.-+.+++-|.++++| +-|-. -++|.+++
T Consensus 204 -----~-~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e-kKtkkEm~~v~iGiili 276 (288)
T COG4975 204 -----R-FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE-KKTKKEMVYVIIGIILI 276 (288)
T ss_pred -----c-hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec-cCchhhhhhhhhhHHHH
Confidence 0 1111234455566555666666666665554443334666778888999999999 76755 45688999
Q ss_pred HHHHHHhhhhe
Q 018814 336 FLGSGLYAYYK 346 (350)
Q Consensus 336 ~~g~~~~~~~~ 346 (350)
++|..+....|
T Consensus 277 vvgai~lg~~K 287 (288)
T COG4975 277 VVGAILLGIAK 287 (288)
T ss_pred HHHhhhhheec
Confidence 99888765443
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.07 E-value=0.0017 Score=49.17 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=59.2
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
.+..-+++..+.++.-.+++++|++. |.+-.....+.+.+.++++++|+.+..+++++.+.++|+....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 33344677778889999999999984 5677789999999999999999999999999999999998643
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.99 E-value=0.0028 Score=48.63 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=58.0
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
....-+++..+.++...+++++|++. +.+-.....+.+.+.+.+++||++++.++.++.+++.|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 33444677778889999999999995 566667888999999999999999999999999999999763
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.99 E-value=0.0025 Score=49.12 Aligned_cols=67 Identities=12% Similarity=0.212 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 127 LAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 127 ~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
.-+++..+.++...+++.+|++.+-.+ ....-+.+.+.++++++|++++.++.++.++++|+.+...
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 346777788889999999999976665 5688899999999999999999999999999999988543
No 78
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.98 E-value=0.0033 Score=47.97 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 126 PLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 126 ~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
..-.++..+.++...+++++|++. +.+-.....+.+.+.+++++||++++.++.++.++++|++...
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 334677788889999999999985 5566678999999999999999999999999999999998753
No 79
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.73 E-value=0.027 Score=49.25 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=88.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (350)
.+...++..+.+|....+..|.+=+.- +...=+..-|+++.++..++.....- +...+.+...
T Consensus 148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~~---~g~~g~a~gm~vAaviv~Pig~~~ag--------------~~l~~p~ll~ 210 (292)
T COG5006 148 VGVALALGAGACWALYIVLGQRAGRAE---HGTAGVAVGMLVAALIVLPIGAAQAG--------------PALFSPSLLP 210 (292)
T ss_pred HHHHHHHHHhHHHHHHHHHcchhcccC---CCchHHHHHHHHHHHHHhhhhhhhcc--------------hhhcChHHHH
Confidence 456777777888887777777665421 23334555677777776665442110 0112222233
Q ss_pred HHhhHHHH-HHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814 123 HTLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF 189 (350)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~ 189 (350)
.-+..+++ -..-..+...+++..|...+.++.++.|.+.++...++++|+++..+|.++..++++.+
T Consensus 211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 33333322 22334588899999999999999999999999999999999999999999988887664
No 80
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.71 E-value=0.0084 Score=54.95 Aligned_cols=117 Identities=21% Similarity=0.213 Sum_probs=81.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC 278 (350)
Q Consensus 199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (350)
...|..+++.|+++.+...+++|+-..|.+.++..-. . ...+...++.||..++..
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~---------------------~~~~~l~~~~W~~G~~~~- 60 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S---------------------GGRSYLRRPLWWIGLLLM- 60 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c---------------------hhhHHHhhHHHHHHHHHH-
Confidence 3579999999999999999998886553222111100 0 001112233344443322
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 279 ILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
.++...+ +.+....+++.++.++.+.-++..+++..+++| +++..++.|.++++.|..+..
T Consensus 61 ~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e-~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 61 VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGE-KLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcc-cchHhHHhhHHHHHhhheeeE
Confidence 2333333 345677788999999999999999999999999 999999999999999987654
No 81
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.66 E-value=0.007 Score=45.22 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhhhcccchhHH-HHHHHHHHHHHHHHHHHHhccccCcchhhhHHHh
Q 018814 129 VAYLLYMVVSVESVRGVNVPMY-TTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLI 184 (350)
Q Consensus 129 ~~~~~~~~~~~~al~~~~~s~~-~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~ 184 (350)
.++..+.++...+++++|++.+ .+......+.+.+.+.+++||+++..++.++.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 5788888999999999999966 5667799999999999999999999999998763
No 82
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.57 E-value=0.013 Score=52.02 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
.+....-+++=...|...+.+.++.+|.+..+....|.+++.++++++++. +++..||.+..+...|+.+....
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r-~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKR-RLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHHHheeecC
Confidence 355566667767788888999999999999999999999999999999999 99999999999999999987654
No 83
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.39 E-value=0.011 Score=45.53 Aligned_cols=71 Identities=11% Similarity=0.165 Sum_probs=57.9
Q ss_pred HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
.++..+|..+- ..+...++..+...+.|.+.-+ .+++-+||++.++++.+|..+++.+.|+.++++|+.+.
T Consensus 41 n~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 41 NPKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred hHHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34555555444 4455677888999999988777 58999999999999999999999999999999999874
No 84
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.38 E-value=0.086 Score=47.16 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=56.1
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhce
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAF 189 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~ 189 (350)
-+..|+.+...+.+++.+.+...++.+-.+..+.++...+.+.+++||+=+++++ .++++.++|.+
T Consensus 198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 4555899999999999999999999999999999999999999999999888865 45555555554
No 85
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.16 E-value=0.24 Score=40.16 Aligned_cols=139 Identities=16% Similarity=0.147 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (350)
....++++.+.++-.++.-..-++.+..+ +|.--.+.+...+...+..+........+. . ......+|. ...|+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~-a--~~~~~pwW~--~~GG~ 77 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGL-A--AVASAPWWA--WIGGL 77 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCch-h--hccCCchHH--HHccc
Confidence 35677888899999999888888876433 577777778888777777666553322111 1 111112222 23335
Q ss_pred HHHHHHHHHHHHhhccchhHHHHhhhhHH-HHHHHHHHH-HhCC--CCcchhhHHHHHHHHHHHHHhhh
Q 018814 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKD-LFTIGLGWI-LFGG--LPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~-v~~~~ls~~-~~~e--~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
++...-........+.++++...+..... +.+.++.-+ ++|+ .++++..+.|++++++|+++...
T Consensus 78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 55555444456667777765544444444 444443332 2333 26999999999999999555443
No 86
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.07 E-value=0.11 Score=48.33 Aligned_cols=137 Identities=14% Similarity=0.114 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH--HHHHHHHHHH--HHHHhccchhhhcCCCccchhHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN--GVICGPLLLL--WTFLRGDLETTINFPYLLSPGFLVVLC 275 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 275 (350)
..|+++++++++|++.+.+-.|+ .++ -++|.. |- .+++.++... ..+..++.. +.-...+...+..-+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~---~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WSVGGIFSWLILPWLIAALLLPDFW---AYYSSFSGSTLLPVF 77 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHH---HHHHhcCHHHHHHHH
Confidence 47999999999999999888887 332 345544 32 1222222221 111112221 111123455566667
Q ss_pred HHHHHHHHHHHHHHHHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCC------cchhhHHHHHHHHHHHHHhhh
Q 018814 276 FSCILAFFLNYSIFLNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLP------FDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~------~t~~~~~G~~li~~g~~~~~~ 344 (350)
+.|++=-..|..++..+|+.+- ....+..-++-+..++++.+++||-+ -....++|.+++++|+.+.++
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 7777766677777777777654 44556666778888999999998621 124578899999999999987
No 87
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.90 E-value=0.37 Score=44.43 Aligned_cols=132 Identities=13% Similarity=0.091 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhhc--cCCCChhhHHHHHHHHHHHHHHHHHHHhc-c-chhh-hcCC--CccchhHHHHHHHHHHHHHH
Q 018814 211 ITTAIYLATIARIGK--SSGLNSFGLMWCNGVICGPLLLLWTFLRG-D-LETT-INFP--YLLSPGFLVVLCFSCILAFF 283 (350)
Q Consensus 211 ~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~ 283 (350)
+-.+......|.-.+ +.++.|.+..+.+=++-.+++....+... . .... .... .+.++....-+..-+++=.+
T Consensus 25 ~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal 104 (345)
T KOG2234|consen 25 AQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL 104 (345)
T ss_pred HHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence 333334444444333 33567777766665554444444433321 0 0111 1111 11222223445555555556
Q ss_pred HHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 284 LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 284 ~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
.|...+.+.++.+|.++.+...+|...+.+++.+++++ +++..||...++...|+.+..
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~r-kLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRR-KLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHh
Confidence 77666888999999999999999999999999999999 999999999999999998876
No 88
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.67 E-value=0.0061 Score=53.52 Aligned_cols=68 Identities=19% Similarity=0.328 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
+=|+.++..-+..|++.++.+-..+.+.....|+++++++|++++| +.|.....|..+.+.|+.+..+
T Consensus 102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE-~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKE-PFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcC-CCcHHHHHHHHHhhheEEEEec
Confidence 3344444444555677778888888888999999999999999999 9999999999999999987754
No 89
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.49 E-value=0.19 Score=43.88 Aligned_cols=63 Identities=11% Similarity=0.047 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (350)
Q Consensus 128 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l 190 (350)
.+..+....+-...++|.+....++...+.++++.+++.++++|+++...+.|+.+.+.|+.+
T Consensus 159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 345556667888999999999999999999999999999999999999999999999999865
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.46 E-value=0.065 Score=39.94 Aligned_cols=54 Identities=15% Similarity=0.115 Sum_probs=30.0
Q ss_pred HHHHHHHH-HHHhhccchh-HHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHH
Q 018814 281 AFFLNYSI-FLNTTLNSAV-TQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLG 335 (350)
Q Consensus 281 ~~~~~~~~-~~~~~~~~a~-~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li 335 (350)
++..++.. .+++|+.+.. .+++..-+..+...+.|+++||| ++|+.+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E-~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE-SLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHhheeeC
Confidence 44444333 3677887664 45777888999999999999999 9999999998875
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.32 E-value=0.53 Score=37.84 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccc-cccCCCCccCCCCCCccchHHHHHH
Q 018814 46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIIN-FTMGDSLMTSDSSSTFVPLKTLMHT 124 (350)
Q Consensus 46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (350)
+.+++-+..-..+..+|-.+-+..+ .|+.-++.-+..+.+.+.+.....+.+ .+. .+...++.+
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~-------------~~~~p~w~~ 68 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLAS-------------LSSVPWWAY 68 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccch-------------hccCChHHh
Confidence 3445555666666777777776653 588888888888888877665543321 110 111123333
Q ss_pred hhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHH----HhccccCcchhhhHHHhhhhcee
Q 018814 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYF----LAGQKYTPPVVGSVGLIILGAFV 190 (350)
Q Consensus 125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~----~~~e~~~~~~~~~~~l~~~Gv~l 190 (350)
+ .|++-.....+...+...+.++..+.+. .-+.+...+++.+ ..++++++++..++.++++|+.+
T Consensus 69 l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 69 L-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred c-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3 4566677778888899999988777665 4556677777775 45788999999999999999864
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.00 E-value=0.049 Score=49.99 Aligned_cols=145 Identities=14% Similarity=0.107 Sum_probs=103.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHHc-cccccccCCCCccCCCCCC
Q 018814 39 AMTRRGANAAISYMACAVLLVMFNKAALS--SYNFPCANVITLLQMISSCSFLY-FLRRW-KIINFTMGDSLMTSDSSST 114 (350)
Q Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~~K~~l~--~~~f~~p~~l~~~r~~~~~~~l~-~~~~~-~~~~~~~~~~~~~~~~~~~ 114 (350)
+..+.|...+..+.+....-.++.|.+++ +.+.+ ++.+...+--++...+. +.... ....+. .. . ..
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~-~~------~-~~ 229 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFV-GF------L-TA 229 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhccccee-ee------e-cc
Confidence 35677888999999999999999999994 44443 55566666666666665 33221 111100 00 0 00
Q ss_pred ccchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 115 FVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
..+.. .......+++..+.+...+..+..+++-++++....-=+++...++++++++++..+.+|..+.++|+.+...
T Consensus 230 ~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 230 PWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred ccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 12223 3334444577777888999999999999999999988888999999999999999999999999999988543
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.15 E-value=0.57 Score=43.48 Aligned_cols=67 Identities=10% Similarity=0.084 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC
Q 018814 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD 195 (350)
Q Consensus 129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 195 (350)
++..++-+++-.|.-.++.-.+++-.+++.+..++...++.+++++...++|.+.+++|.+.+...+
T Consensus 326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 6778889999999999999999999999999999999999999999999999999999998876544
No 94
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.06 E-value=1.6 Score=39.50 Aligned_cols=73 Identities=11% Similarity=0.132 Sum_probs=65.1
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (350)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l 190 (350)
.+-++.++..+.+-++++.+-+.-++.-..=+.+++..+-=++.++++.+.++.++++.+|.++.+.+.|..+
T Consensus 238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 3567888889999999999999989888877888888888999999999999999999999999999888766
No 95
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.13 E-value=2.6 Score=36.40 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=59.3
Q ss_pred cchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF 189 (350)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~ 189 (350)
.+.+.+..++.-|++-.+..++.-++++-++..++.+...+.-.-..+-+.+++++..+...+.++++++...+
T Consensus 219 l~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~ 292 (309)
T COG5070 219 LSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGA 292 (309)
T ss_pred CChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHH
Confidence 33445566677778888899999999999999999999999988888888888888888877777766554433
No 96
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.41 E-value=8.9 Score=31.17 Aligned_cols=134 Identities=12% Similarity=0.035 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (350)
Q Consensus 44 ~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (350)
.++..+.-+.+.....-.|-.+-+.. ..|..-.+.-+.++..++..+...+..+ ++.. ......|+.
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a----------~~~~~pwW~ 72 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLLIKQGH-PGLA----------AVASAPWWA 72 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchh----------hccCCchHH
Confidence 35566677777777888888887765 3688778888898888877766652221 1110 011122343
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHH-HHHHHHHHHHHHHHHHHh----ccccCcchhhhHHHhhhhceee
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLA----GQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~p~~~~l~~~~~~----~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
+++ |++-...............++..+ +.-+-+-+.-++++.+=. +++++..++.++++.++|+.+.
T Consensus 73 ~~G-G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 73 WIG-GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHc-cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 332 333333334444445555555444 444566677777776644 4789999999999999996553
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=88.38 E-value=0.25 Score=43.21 Aligned_cols=132 Identities=11% Similarity=-0.006 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (350)
+++.+++=++.|+..-....|.- -+|.+.+.=+.+-+.++.....++. ....+...+..-+.+|.+=
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~---------~p~~T~~~~iv~~isG~~W 69 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFV---------SPELTLTIFIVGFISGAFW 69 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheee---------cCccchhhHHHHHHhhhHh
Confidence 46778888888888765555543 3566655444443333333322211 1223444455666677766
Q ss_pred HHHHHHHHHHhhccchhHHHHhh-hhHHHHHHHHHHHHhCCCCcchhh----HHHHHHHHHHHHHhhhhee
Q 018814 282 FFLNYSIFLNTTLNSAVTQTICG-NLKDLFTIGLGWILFGGLPFDFLN----VFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~a~~~sv~~-~~~~v~~~~ls~~~~~e~~~t~~~----~~G~~li~~g~~~~~~~~~ 347 (350)
.+.+..++++++..+...+...+ -++-+-+.++|+++||| =.+..+ .+..+++++|+++.+++++
T Consensus 70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~E-W~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHE-WTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEec-cCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 66777778888877766655444 45667778999999999 555443 3356788899998887665
No 98
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=86.89 E-value=0.58 Score=39.48 Aligned_cols=61 Identities=23% Similarity=0.230 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814 283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344 (350)
Q Consensus 283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~ 344 (350)
..||....++++.+|+.++-...-...+.-+++|+++|| .+....++..++.+.|+...++
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D-~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGD-RFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhcc-chhhhhHHHHHHHhCcEEEEEe
Confidence 346666688899999999999999999999999999999 9999999999999999877654
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.26 E-value=4.7 Score=36.76 Aligned_cols=140 Identities=13% Similarity=0.033 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccchHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (350)
-.++....++........|...+.-+++ -+.+.++.-+...+.+...... +..+ ... .+.+.+.+...+..
T Consensus 159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~-----~~~~~~~~~~~~~~ 230 (314)
T KOG1444|consen 159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELD--ALS-----LNFDNWSDSSVLVV 230 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchH--HHH-----hhcccccchhHHHH
Confidence 3455555556666666677777654442 2334445555555554444322 2111 000 01111122233333
Q ss_pred HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (350)
Q Consensus 124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 192 (350)
+..-+++-.+-.++.++|.+..|+.+.++.....-..+.+...++.+++.++....|+.+.++|-++..
T Consensus 231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 334346667778999999999999999999988888888888888889999999999999988887743
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=85.41 E-value=1.8 Score=33.35 Aligned_cols=51 Identities=22% Similarity=0.161 Sum_probs=36.9
Q ss_pred HHhhccchhHHHHh-hhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814 290 LNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 290 ~~~~~~~a~~~sv~-~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~ 341 (350)
..+++.+-+..... +.+.=+++.+.++++.+| ..+...++|+++++.|+.+
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~-~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEE-VISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCc-ccchhHHHHHHHHHcCeee
Confidence 33455544433333 577778888888777666 8899999999999999864
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=85.27 E-value=0.84 Score=39.68 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=61.2
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (350)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l 190 (350)
..++.+..+++.-.+++++-+.-..+-++=+-+++..+--.|+.+.+.++++..++.++|+|..+.+.|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 356667777888888888888888777776677777788899999999999999999999999999998876
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=82.29 E-value=25 Score=32.68 Aligned_cols=138 Identities=12% Similarity=0.169 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHH--HHhccchhhhcCCCccchhHHHHHHH
Q 018814 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW-CNGVICGPLLLLWT--FLRGDLETTINFPYLLSPGFLVVLCF 276 (350)
Q Consensus 200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~ 276 (350)
..|+++..+++++.+.+.+=.||..+ . ++|... .+.+++.++..+.. +..+|..+... ..+...+.....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~---W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~---~~~~~~l~~~~l 78 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG---W-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYS---ATPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC---c-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH---hCChhHHHHHHH
Confidence 47999999999999999888777642 3 455433 35555655554332 22233322221 112222222222
Q ss_pred HHHH-HHHHHHHHHHHhhccc-hhHHHHhhhhHHHHHHHHHHHHhCCC------CcchhhHHHHHHHHHHHHHhhhh
Q 018814 277 SCIL-AFFLNYSIFLNTTLNS-AVTQTICGNLKDLFTIGLGWILFGGL------PFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 277 ~~~~-~~~~~~~~~~~~~~~~-a~~~sv~~~~~~v~~~~ls~~~~~e~------~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
.|++ ++. +...=..+|+.+ +...++.--+..++.+++--++.|+. +-....++|.++.++|+.+..+.
T Consensus 79 ~G~lWGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 79 FGVLWGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 2322 111 010013344443 23333333334444444433332210 23456889999999999998764
No 103
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.15 E-value=0.59 Score=42.51 Aligned_cols=120 Identities=17% Similarity=0.210 Sum_probs=79.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHH
Q 018814 198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS 277 (350)
Q Consensus 198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (350)
++..|.++++.|++..+...+..||-.+|......+ . + ....+...++ .|+.-+..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--a-----------------~----~gg~~yl~~~-~Ww~G~lt 73 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--A-----------------G----EGGYGYLKEP-LWWAGMLT 73 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--c-----------------c----CCCcchhhhH-HHHHHHHH
Confidence 446799999999999998888877765532110000 0 0 0111222222 23333333
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 278 CILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
-.+|=..|++. ....+++-++.++.+.-+.+++++..+++| ++++...+|+++.++|..+...+
T Consensus 74 m~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~E-kl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 74 MIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKE-KLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHH-HHHHhhhhheeEEecccEEEEEe
Confidence 33454555443 345567888888999999999999999999 99999999999999998766543
No 104
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=77.37 E-value=6.8 Score=34.91 Aligned_cols=130 Identities=17% Similarity=0.158 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (350)
Q Consensus 202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (350)
|++.+++|+++++..-+=.||.-. .|+.-.++++.....+.........+. +.. +..-++.|.+=
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~f-----~p~amlgG~lW 65 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGF-------PPF-----YPWAMLGGALW 65 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCC-------Ccc-----eeHHHhhhhhh
Confidence 567788899999988777776643 467666666655444444433333222 111 11222333332
Q ss_pred HHHHHHHHHHhhccc-hhHHHHhhhhHHHHHHHHHHH-HhCCC----CcchhhHHHHHHHHHHHHHhhhhe
Q 018814 282 FFLNYSIFLNTTLNS-AVTQTICGNLKDLFTIGLGWI-LFGGL----PFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~-a~~~sv~~~~~~v~~~~ls~~-~~~e~----~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
...|.+..-.+|..+ +.-..+.+...-+.....|-+ +||++ .-.+.+++|.+++++|..++..-|
T Consensus 66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence 223333333333332 333445555555555555532 56552 256889999999999999987533
No 105
>PRK02237 hypothetical protein; Provisional
Probab=76.63 E-value=7.1 Score=29.63 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=39.9
Q ss_pred hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814 298 VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY 345 (350)
Q Consensus 298 ~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~ 345 (350)
-..+..+-+-.+.+.+.+|.+-|+ ++|..+++|.++.++|+.+..+.
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHheec
Confidence 456667777788889999999998 99999999999999999876543
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=76.34 E-value=18 Score=27.40 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814 312 IGLGWILFGGLPFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 312 ~~ls~~~~~e~~~t~~~~~G~~li~~g~~~ 341 (350)
+.++++.++| ++++..+.|.+++++++++
T Consensus 77 ~~Fsv~~l~E-~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGE-PLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCC-CccHHHHHHHHHHHHhhhe
Confidence 5578889999 9999999999999888764
No 107
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=76.20 E-value=25 Score=32.08 Aligned_cols=66 Identities=5% Similarity=-0.004 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 126 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
..|..-++....-+.-+..+++-+.++..-..-+-+.+++.++.+++++...|+|..++..|+..-
T Consensus 248 l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 248 LGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 334444444445555567777777777777777889999999999999999999999999999884
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.05 E-value=20 Score=27.18 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=40.7
Q ss_pred hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 298 VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 298 ~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
-..+..+-+-.+.+.+.+|.+=|+ +++..+++|.++.++|+.+..+..
T Consensus 58 RvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 58 RVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEecC
Confidence 456677778888999999999998 999999999999999998765543
No 109
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=74.04 E-value=76 Score=29.54 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=69.2
Q ss_pred cchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHH--HHHHHHHHHHHHHHHHh-------ccccCcchhhhHHHhhh
Q 018814 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTT--LRRTTVAFTMIMEYFLA-------GQKYTPPVVGSVGLIIL 186 (350)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~--l~~~~p~~~~l~~~~~~-------~e~~~~~~~~~~~l~~~ 186 (350)
.|.+.+......|+++......+-.+.+|+.+|..+- +--+..+-+. +-.++. .++-.....+++++.++
T Consensus 68 ~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTl-ippi~~g~~~~l~~~~~g~~vL~Gv~v~Li 146 (344)
T PF06379_consen 68 TPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTL-IPPIFQGTFDELLATPSGQIVLLGVAVCLI 146 (344)
T ss_pred CChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhc-hHHHHcCcccccccCCCchhhhhHHHHHHH
Confidence 3345677778889999999999999999988875443 2233333222 222222 22334567899999999
Q ss_pred hceeeecc----C-------cccc-hhHHHHHHHHHHHHHHHHHHH
Q 018814 187 GAFVAGAR----D-------LSFD-FFGYAVVFLANITTAIYLATI 220 (350)
Q Consensus 187 Gv~l~~~~----~-------~~~~-~~G~~l~l~sa~~~a~~~v~~ 220 (350)
|+++.... | .+++ .+|.+.+++|.+..|...+-.
T Consensus 147 GIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 147 GIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred HHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99984321 1 1222 389999999999999887743
No 110
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=69.53 E-value=14 Score=33.21 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814 277 SCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~ 343 (350)
-+++-....-..+..+-.++|+...+..-.-.++..++|..+++. +++..+|.|+..+..|.....
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~-ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNR-TITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhc-ccchhhHHHHHHHHhhhheee
Confidence 333333344444555667788888888888889999999999999 999999999999999987654
No 111
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=69.00 E-value=7.5 Score=29.34 Aligned_cols=70 Identities=14% Similarity=0.162 Sum_probs=52.3
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhcccchhHHH-HHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
+.+.+|+.+-.++ ..+++.-++..+.+.+. +-.+++-.|+.+....+..|...++...|..+.++|+.+.
T Consensus 53 w~Y~iPFllNqcg-Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQCG-SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHHhh-HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 4555665555544 45777778888888655 4456788899999988777777788899999999998763
No 112
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=67.65 E-value=7.3 Score=34.93 Aligned_cols=137 Identities=12% Similarity=0.207 Sum_probs=79.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc--c--ccccccCCCCccCCCCCCccch
Q 018814 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW--K--IINFTMGDSLMTSDSSSTFVPL 118 (350)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~ 118 (350)
.|+....+....+..+..+++..+++++= ++=.-.++-.....+...+...- . +.-++.+.- ..+.
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-h~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~---------~~p~ 233 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGK-HWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESY---------LIPL 233 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcce---------eccc
Confidence 45555566667777888888888887763 45555566555565555443220 0 000010000 0111
Q ss_pred HHHHHHhhHHHHH-HHHHHHhhhhhcccchh-------HHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814 119 KTLMHTLPLAVAY-LLYMVVSVESVRGVNVP-------MYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (350)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~~~~~~al~~~~~s-------~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l 190 (350)
.... +|....+ ..+...++.|.+.+..= +.++...+-=.+..+++.+.++..+++..|+|..+.+.|..+
T Consensus 234 ~g~~--vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 234 LGFK--VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL 311 (330)
T ss_pred cCcc--ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence 1111 4444333 33555777777665422 233444455567778888889999999999999999999887
Q ss_pred e
Q 018814 191 A 191 (350)
Q Consensus 191 ~ 191 (350)
.
T Consensus 312 f 312 (330)
T KOG1583|consen 312 F 312 (330)
T ss_pred H
Confidence 3
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=64.76 E-value=54 Score=24.86 Aligned_cols=55 Identities=7% Similarity=0.039 Sum_probs=35.5
Q ss_pred HhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 137 VSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 137 ~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
.+=.+.+.-+.+.-.+++ ..+...-+.++.+++||+++++...|-+..+.++.++
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 344444555555444444 2233334557788899999999999888887777653
No 114
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.79 E-value=3.2 Score=37.10 Aligned_cols=52 Identities=25% Similarity=0.265 Sum_probs=43.0
Q ss_pred HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814 289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 289 ~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~ 341 (350)
..|++..+...+-+-..+..+++++++++++++ +=+.....|+.++++|..+
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkq-kTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQ-KTSFFALGCCLLIILGFGL 171 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhccc-ccccccceeehhheehhee
Confidence 467788887777777888999999999999998 8788888888888877644
No 115
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=52.74 E-value=4.6 Score=36.12 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=0.0
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHH-Hhccc-cCcchhhhHHHhhhhceeeeccCcc--cchhHHHHHHHHHHHHHHHH
Q 018814 142 VRGVNVPMYTTLRRTTVAFTMIMEYF-LAGQK-YTPPVVGSVGLIILGAFVAGARDLS--FDFFGYAVVFLANITTAIYL 217 (350)
Q Consensus 142 l~~~~~s~~~~l~~~~p~~~~l~~~~-~~~e~-~~~~~~~~~~l~~~Gv~l~~~~~~~--~~~~G~~l~l~sa~~~a~~~ 217 (350)
++-.+-+-.+++.+...+.+.++-++ ++|+| +-..-.++++++++-..+...-... .=+.|+++.+++....-.-.
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW 123 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVW 123 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666655544443 44555 4455555555555444443322221 11356665555444333333
Q ss_pred HHHHHhhccCCCChhhHHHHHHHH
Q 018814 218 ATIARIGKSSGLNSFGLMWCNGVI 241 (350)
Q Consensus 218 v~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.|. .+.++++-+-++++.+...+
T Consensus 124 ~Ym-~lLr~~GAs~WtiLaFcLAF 146 (381)
T PF05297_consen 124 FYM-WLLRELGASFWTILAFCLAF 146 (381)
T ss_dssp ------------------------
T ss_pred HHH-HHHHHhhhHHHHHHHHHHHH
Confidence 342 35556667778877665433
No 116
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=49.05 E-value=23 Score=20.42 Aligned_cols=19 Identities=37% Similarity=0.293 Sum_probs=10.9
Q ss_pred CcchhhHHHHHHHHHHHHH
Q 018814 323 PFDFLNVFGQLLGFLGSGL 341 (350)
Q Consensus 323 ~~t~~~~~G~~li~~g~~~ 341 (350)
.-++..++|.+++.++.++
T Consensus 9 ~~~~~~~~G~~l~~~~~~~ 27 (34)
T TIGR01167 9 GNSLLLLLGLLLLGLGGLL 27 (34)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 4566777787554443333
No 117
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=47.72 E-value=1.2e+02 Score=27.47 Aligned_cols=53 Identities=19% Similarity=0.281 Sum_probs=41.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC
Q 018814 143 RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD 195 (350)
Q Consensus 143 ~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 195 (350)
+.-.+..+..+...-=-.|.+++++++.++++.+-.-+..+++.|+.+-..++
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 33445556666666667889999999999999999999999999999855444
No 118
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=47.54 E-value=2.7e+02 Score=26.82 Aligned_cols=88 Identities=7% Similarity=0.028 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc-CcccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHH
Q 018814 157 TVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLM 235 (350)
Q Consensus 157 ~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~ 235 (350)
.-+..+++++.. ++|++...... -+++|.+-++.. +.-..+...+.++++++..-+...+.||+.-|...+...+-
T Consensus 253 g~l~~~~~~~~~-~gk~~~~~~~n--G~LAGLVaITa~~~~v~p~~A~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~vH 329 (404)
T TIGR03644 253 GAIAALLLTKLL-FGKADLTMVLN--GALAGLVAITAEPLTPSPLAATLIGAVGGVIVVFSIVLLDKLKIDDPVGAISVH 329 (404)
T ss_pred HHHHHHHHHHHH-cCCCCHHHHHH--HHHhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCchHhh
Confidence 334444555543 34555443221 223333333322 22233455566666555554444444543323234455555
Q ss_pred HHHHHHHHHHHH
Q 018814 236 WCNGVICGPLLL 247 (350)
Q Consensus 236 ~~~~~~~~~~l~ 247 (350)
....+.+.+...
T Consensus 330 g~~Gi~G~i~~g 341 (404)
T TIGR03644 330 GVAGIWGTLVVP 341 (404)
T ss_pred hHHHHHHHHHHH
Confidence 555555555443
No 119
>PRK02237 hypothetical protein; Provisional
Probab=46.73 E-value=22 Score=27.09 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 154 RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 154 ~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
.....+...+..+.+-++|+++.++.|..++++|+.++..
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 3455566667788899999999999999999999987644
No 120
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=45.04 E-value=23 Score=26.89 Aligned_cols=43 Identities=5% Similarity=0.056 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814 151 TTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (350)
Q Consensus 151 ~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 193 (350)
..=.....+...+-.+.+-++|+++.++.+..++++|+.++..
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 3333455666777888899999999999999999999988654
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=44.61 E-value=31 Score=26.04 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc
Q 018814 154 RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194 (350)
Q Consensus 154 ~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 194 (350)
.........+..+++-++++++.+|.|..++++|+.++...
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34555666677888889999999999999999999886554
No 122
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=43.12 E-value=1.5e+02 Score=23.38 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHH
Q 018814 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQM 82 (350)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~ 82 (350)
+++.+...++++...++-|-++..++ +||++++-...
T Consensus 59 ~v~~vv~V~s~v~N~VL~K~~~~~m~-NY~fFL~QlTt 95 (130)
T PF08627_consen 59 LVYVVVYVVSGVINRVLYKKMTNPMK-NYPFFLNQLTT 95 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHhcc
Confidence 45566677777777777777776543 46777765533
No 123
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=42.12 E-value=2.2e+02 Score=24.38 Aligned_cols=19 Identities=16% Similarity=0.329 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHhcccc
Q 018814 155 RTTVAFTMIMEYFLAGQKY 173 (350)
Q Consensus 155 ~~~p~~~~l~~~~~~~e~~ 173 (350)
...|+.+.++.+.+.++|.
T Consensus 160 ~~~~~~~pll~~~~~~~r~ 178 (214)
T PF11139_consen 160 ASLPALLPLLAYLVAPERA 178 (214)
T ss_pred HHHHHHHHHHHHHHhHHHH
Confidence 5667777778888777764
No 124
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=36.68 E-value=7.2 Score=34.58 Aligned_cols=67 Identities=10% Similarity=0.212 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHh
Q 018814 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLY 342 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~ 342 (350)
++.++.-.=.|+....+.++++-+....+.+-..+...+++|++++. +--+.++.|.++-++|+...
T Consensus 82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLkt-rYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKT-RYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHH-HHhhheeeeEEeEecceEEE
Confidence 33444445566666678889999999999999999999999999987 89999999999888887543
No 125
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=34.58 E-value=3.3e+02 Score=24.19 Aligned_cols=33 Identities=6% Similarity=-0.134 Sum_probs=24.0
Q ss_pred HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCC
Q 018814 289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321 (350)
Q Consensus 289 ~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e 321 (350)
+.+.++.++......+.++-.+..+-..+++.-
T Consensus 113 ~vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~s 145 (249)
T PF10225_consen 113 AVCYRYGPPVDPRSRNFVKWALQLIGLVLIYFS 145 (249)
T ss_pred HhhcccCCCccHhHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888888888888887777776644
No 126
>PF05570 DUF765: Circovirus protein of unknown function (DUF765); InterPro: IPR008484 This family consists of several short (27-30aa) porcine and bovine circovirus ORF6 proteins of unknown function.
Probab=33.98 E-value=21 Score=19.30 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=10.2
Q ss_pred CCCCccccCCCCCCCccchh
Q 018814 6 SKSPMLPVSEPARGDEGEKE 25 (350)
Q Consensus 6 ~~~~~~p~~~~~~~~~~~~~ 25 (350)
++.|-+|..+++...+..++
T Consensus 3 sstpaspapsdils~~pqs~ 22 (29)
T PF05570_consen 3 SSTPASPAPSDILSSKPQSK 22 (29)
T ss_pred cCCCCCCCcHHHHhcCcccc
Confidence 44566666655544443333
No 127
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.28 E-value=5.2e+02 Score=25.12 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=40.7
Q ss_pred HHHHHhccccCcchhhhHHHhhhhcee--eeccCcccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018814 164 MEYFLAGQKYTPPVVGSVGLIILGAFV--AGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226 (350)
Q Consensus 164 ~~~~~~~e~~~~~~~~~~~l~~~Gv~l--~~~~~~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~ 226 (350)
+-=++.|.|+++.+++-+.++++=..+ .+..| +.+ .+..+.+.|+.|.++-..|.+.+.++
T Consensus 314 lfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSE-hi~-F~~AYliAa~a~i~Li~~Y~~~vl~~ 376 (430)
T PF06123_consen 314 LFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSE-HIG-FNLAYLIAALACIGLISLYLSSVLKS 376 (430)
T ss_pred HHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHh-hhc-hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333456788888888655554433332 33333 333 56778888999999999999998874
No 128
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=29.90 E-value=4.1e+02 Score=23.77 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHH-HHHHH-Hhc---ccc--CcchhhhHHHhhhhceee
Q 018814 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTM-IMEYF-LAG---QKY--TPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 127 ~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~-l~~~~-~~~---e~~--~~~~~~~~~l~~~Gv~l~ 191 (350)
-|.+++.++.+..-.++.+..+....+=++.-+.+- ..+++ +++ |.+ ++..++|++++++|..+.
T Consensus 61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f 132 (254)
T PF07857_consen 61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIF 132 (254)
T ss_pred hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhe
Confidence 358888888888889999999988888776444433 23332 232 222 355678888888888763
No 129
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=26.23 E-value=53 Score=20.17 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHhhhheec
Q 018814 330 FGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 330 ~G~~li~~g~~~~~~~~~~ 348 (350)
+|.++++++.+++-+.|++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4666777777777554443
No 130
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=25.81 E-value=95 Score=23.50 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=34.6
Q ss_pred HHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814 300 QTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 300 ~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
.+-.+-+-.+.+....+++=|. .++.+.++|.++.++|+.+.....
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~-~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGV-RPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCc-CCcHHHhhhHHHHHhceeeeEeCC
Confidence 4444556666777777777676 899999999999999987765543
No 131
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=25.23 E-value=8.2e+02 Score=25.79 Aligned_cols=45 Identities=13% Similarity=-0.029 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814 147 VPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (350)
Q Consensus 147 ~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 191 (350)
.+-+.++..+.|+-++.++.+...+|.+.+.+.+.+-.++|....
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 345567788899999989888877776666677777777777543
No 132
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=25.17 E-value=81 Score=20.15 Aligned_cols=22 Identities=23% Similarity=0.199 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHHhhhheecC
Q 018814 328 NVFGQLLGFLGSGLYAYYKLVG 349 (350)
Q Consensus 328 ~~~G~~li~~g~~~~~~~~~~~ 349 (350)
.++-+.++++|+++|.+.+.++
T Consensus 15 ~l~~~~~~Figiv~wa~~p~~k 36 (48)
T cd01324 15 GLLYLALFFLGVVVWAFRPGRK 36 (48)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 3344567889999998766544
No 133
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=24.06 E-value=6.4e+02 Score=24.07 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhH
Q 018814 275 CFSCILAFFLNYSIFLNTTLNSAVT 299 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~ 299 (350)
+.....+....+..+..+++.....
T Consensus 355 ~~~~~~~~~~s~i~~~~l~~~~~LR 379 (399)
T PF00909_consen 355 VVILAWSFVVSYIIFKILKKFGGLR 379 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-SB
T ss_pred HHHHHHHHHHHHHHHHHHHhccccC
Confidence 3333344555555556666555443
No 134
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.62 E-value=94 Score=21.40 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHhhhheec
Q 018814 327 LNVFGQLLGFLGSGLYAYYKLV 348 (350)
Q Consensus 327 ~~~~G~~li~~g~~~~~~~~~~ 348 (350)
.-++|++++++|.++|....++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 4567888999999999865443
No 135
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=22.70 E-value=7.1e+02 Score=24.16 Aligned_cols=46 Identities=7% Similarity=0.060 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHH
Q 018814 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLL 248 (350)
Q Consensus 199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (350)
...|..+.+++...|..+. |+ .++...++.+.+.-...+-..+...
T Consensus 418 ~~~~~~~~~~g~~~y~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (473)
T TIGR00905 418 LLLGFILYAPGIIFYGRAR---KE-RGKHVFNKKEILIATIIVIAAIIAI 463 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH---Hh-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467776666666666532 22 1222445555554444333333333
No 136
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.33 E-value=3.6e+02 Score=20.22 Aligned_cols=30 Identities=10% Similarity=0.136 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCcchhhHHHHHHHHHHHHHh
Q 018814 312 IGLGWILFGGLPFDFLNVFGQLLGFLGSGLY 342 (350)
Q Consensus 312 ~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~ 342 (350)
..+|.+.++| ++.+..+.|..++.+|+.+.
T Consensus 84 v~Fsvfyl~e-pl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKE-PLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcC-cchHHHHHHHHHHHHHHHHh
Confidence 3478888999 99999999999999998764
No 137
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=20.86 E-value=5.3e+02 Score=21.96 Aligned_cols=16 Identities=19% Similarity=0.202 Sum_probs=8.7
Q ss_pred HHHHHHHHHhccccCc
Q 018814 160 FTMIMEYFLAGQKYTP 175 (350)
Q Consensus 160 ~~~l~~~~~~~e~~~~ 175 (350)
.+++..+..+++|++.
T Consensus 188 ~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 188 VIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3344455566666654
No 138
>PRK11715 inner membrane protein; Provisional
Probab=20.72 E-value=7.9e+02 Score=23.94 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=38.4
Q ss_pred HHhccccCcchhhhHHHhhhhcee--eeccCcccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018814 167 FLAGQKYTPPVVGSVGLIILGAFV--AGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226 (350)
Q Consensus 167 ~~~~e~~~~~~~~~~~l~~~Gv~l--~~~~~~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~ 226 (350)
++.|.|+++.+++-+.++++=..+ .+..| +.+ .+..+.+.|+.|.++-..|...+.++
T Consensus 323 ~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSE-Hig-F~~AYliAa~a~v~li~~Y~~~vl~~ 382 (436)
T PRK11715 323 LLKKLRIHPVQYLLVGLALVLFYLLLLSLSE-HIG-FTLAYLIAALACVLLIGFYLSAVLRS 382 (436)
T ss_pred HhcCceecHHHHHHHHHHHHHHHHHHHHHHh-hhc-hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345778888887655554433333 33333 233 56778888889999888899888874
No 139
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=20.65 E-value=7.8e+02 Score=23.86 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHhhhhee
Q 018814 327 LNVFGQLLGFLGSGLYAYYKL 347 (350)
Q Consensus 327 ~~~~G~~li~~g~~~~~~~~~ 347 (350)
....|.++...|..+|.+.++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~ 437 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARK 437 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455688888999877765443
No 140
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=20.52 E-value=1.1e+02 Score=22.20 Aligned_cols=24 Identities=25% Similarity=0.242 Sum_probs=19.7
Q ss_pred CcchhhHHHHHHHHHHHHHhhhhe
Q 018814 323 PFDFLNVFGQLLGFLGSGLYAYYK 346 (350)
Q Consensus 323 ~~t~~~~~G~~li~~g~~~~~~~~ 346 (350)
..++..++|.+++++|..+|..++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH
Confidence 568889999999999999887543
No 141
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=20.41 E-value=6.2e+02 Score=22.63 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=14.8
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhhh
Q 018814 118 LKTLMHTLPLAVAYLLYMVVSVESV 142 (350)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~al 142 (350)
+.+++.+.+++++..........-+
T Consensus 51 ~~~~~fL~~l~~G~~~gi~~~s~~i 75 (257)
T PF04018_consen 51 KINLKFLLPLGIGILIGILLFSKVI 75 (257)
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777777776666555444333
No 142
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=20.07 E-value=7.5e+02 Score=23.39 Aligned_cols=35 Identities=9% Similarity=0.041 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHhccccCcchhhhHH--Hhhhhcee
Q 018814 155 RTTVAFTMIMEYFLAGQKYTPPVVGSVG--LIILGAFV 190 (350)
Q Consensus 155 ~~~p~~~~l~~~~~~~e~~~~~~~~~~~--l~~~Gv~l 190 (350)
..+.+++.++.+++..+.. .+.|=+.+ .+.+|..+
T Consensus 313 ~~q~i~~~~f~~fv~fr~~-gkdydaavm~~G~~G~gl 349 (368)
T PF03616_consen 313 AVQTILMVLFAYFVTFRVM-GKDYDAAVMSAGFCGFGL 349 (368)
T ss_pred HHHHHHHHHHHHHHhhhhh-CCChhHHHHhhhhhccCC
Confidence 3334444555555444333 34454444 35555555
Done!