BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018816
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 8/297 (2%)
Query: 47 IRSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFN 106
++ FS +L+ A +N+S +NI G + Y G L D + V + ++ E F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKV-YKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 107 NIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
V S H+++L+L G C+ LVY ++A L ++ PL R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQ 142
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
++A+ +A +AYL ++ R+++ NIL EE+ A + DF L+K + H+ +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV 285
G++ APEYL+TG +EKTDV+ +G +LL L+TG+ L+RLA + + D V
Sbjct: 203 VR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLLDWV 260
Query: 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+ ++ ++ ++ D K+E+++ +++A C S +RP M +V + L
Sbjct: 261 KGLLKEK---KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 8/297 (2%)
Query: 47 IRSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFN 106
++ FS +L+ A +N+ +NI G + Y G L D + V + ++ E F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKV-YKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 107 NIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
V S H+++L+L G C+ LVY ++A L ++ PL R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQ 134
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
++A+ +A +AYL ++ R+++ NIL EE+ A + DF L+K + H+ +
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV 285
G + APEYL+TG +EKTDV+ +G +LL L+TG+ L+RLA + + D V
Sbjct: 195 VR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLLDWV 252
Query: 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+ ++ ++ ++ D K+E+++ +++A C S +RP M +V + L
Sbjct: 253 KGLLKEK---KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 140/299 (46%), Gaps = 21/299 (7%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
DL+ A NN+ + + + G + Y G LRD + + + E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKV-YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLT--HRLKVAMET 171
H ++ LIG C E L+Y+ L LYG + L + ++ RL++ +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG---SDLPTMSMSWEQRLEICIGA 148
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTHIKASTAIGS 230
A + YL + ++ R+++ NIL E + K+ DF +SK E G+TH+ G+
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK-GT 204
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT--IGHLSRLATGGSNFFITDRVEKF 288
L + PEY G EK+DVYSFG +L +L R+ + L R + + E
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--------MVNLAEWA 256
Query: 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347
+ S+ ++ ++ + + + E L+ + + A KCL+ S+EDRP+M DV KL R
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 139/299 (46%), Gaps = 21/299 (7%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
DL+ A NN+ + + + G + Y G LRD + + + E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKV-YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLT--HRLKVAMET 171
H ++ LIG C E L+Y+ L LYG + L + ++ RL++ +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG---SDLPTMSMSWEQRLEICIGA 148
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTHIKASTAIGS 230
A + YL + ++ R+++ NIL E + K+ DF +SK E +TH+ G+
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK-GT 204
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT--IGHLSRLATGGSNFFITDRVEKF 288
L + PEY G EK+DVYSFG +L +L R+ + L R + + E
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--------EMVNLAEWA 256
Query: 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347
+ S+ ++ ++ + + + E L+ + + A KCL+ S+EDRP+M DV KL R
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 48 RSFSSEDLKTAINNYSMRNITIDEIE----GY-ILYMGFLRDRGPILVMKYRKSVRYASE 102
SFS +LK NN+ R I++ + G+ ++Y G++ + + V K V +E
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTE 62
Query: 103 ---RCFNN-IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP 158
+ F+ I ++ H+++++L+G + + LVY +L DRL T P
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PP 120
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L R K+A AN + +L + R+I+ NIL E + AK+ DF L+++ +
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ S +G+ + APE L G K+D+YSFG +LL ++TG
Sbjct: 178 AQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITG 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 16/225 (7%)
Query: 48 RSFSSEDLKTAINNYSMRNITIDEIE----GY-ILYMGFLRDRGPILVMKYRKSVRYASE 102
SFS +LK NN+ R I++ + G+ ++Y G++ + + V K V +E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTE 71
Query: 103 RC---FNN-IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP 158
F+ I ++ H+++++L+G + + LVY +L DRL T P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PP 129
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L R K+A AN + +L + R+I+ NIL E + AK+ DF L+++ +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ S +G+ + APE L G K+D+YSFG +LL ++TG
Sbjct: 187 AQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 48 RSFSSEDLKTAINNYSMRNITIDEIE----GY-ILYMGFLRDRGPILVMKYRKSVRYASE 102
SFS +LK NN+ R I++ + G+ ++Y G++ + + V K V +E
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTE 65
Query: 103 RC---FNN-IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP 158
F+ I ++ H+++++L+G + + LVY +L DRL T P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PP 123
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L R K+A AN + +L + R+I+ NIL E + AK+ DF L+++ +
Sbjct: 124 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ +G+ + APE L G K+D+YSFG +LL ++TG
Sbjct: 181 AQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 48 RSFSSEDLKTAINNYSMRNITIDEIE----GY-ILYMGFLRDRGPILVMKYRKSVRYASE 102
SFS +LK NN+ R I++ + G+ ++Y G++ + + V K V +E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTE 71
Query: 103 RC---FNN-IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP 158
F+ I ++ H+++++L+G + + LVY +L DRL T P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PP 129
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L R K+A AN + +L + R+I+ NIL E + AK+ DF L+++ +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ +G+ + APE L G K+D+YSFG +LL ++TG
Sbjct: 187 AQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPL---LLTHRLKVA 168
S++NH +I+KL G CL + Y G +L + L+G EPL H +
Sbjct: 56 SRVNHPNIVKLYGACLNPVCLVMEYAEGG--SLYNVLHG-----AEPLPYYTAAHAMSWC 108
Query: 169 METANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA-KLFDFSLSKSIPEGKTHIKASTA 227
++ + VAYL P+ ++ R+++P N+L K+ DF + I +TH+ +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 164
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287
GS + APE Y+EK DV+S+G +L ++T R GG F I V
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK----PFDEIGGPAFRIMWAVHN 219
Query: 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVE-LAFKCLSHSAEDRPTMIDVAKKLRQMY 346
R P+I + L +E L +C S RP+M ++ K + +
Sbjct: 220 GTRP-------PLI----------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
Query: 347 R 347
R
Sbjct: 263 R 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPL---LLTHRLKVA 168
S++NH +I+KL G CL + Y G +L + L+G EPL H +
Sbjct: 57 SRVNHPNIVKLYGACLNPVCLVMEYAEGG--SLYNVLHG-----AEPLPYYTAAHAMSWC 109
Query: 169 METANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA-KLFDFSLSKSIPEGKTHIKASTA 227
++ + VAYL P+ ++ R+++P N+L K+ DF + I +TH+ +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 165
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287
GS + APE Y+EK DV+S+G +L ++T R GG F I V
Sbjct: 166 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK----PFDEIGGPAFRIMWAVHN 220
Query: 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVE-LAFKCLSHSAEDRPTMIDVAKKLRQMY 346
R P+I + L +E L +C S RP+M ++ K + +
Sbjct: 221 GTRP-------PLI----------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
Query: 347 R 347
R
Sbjct: 264 R 264
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 26/188 (13%)
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
RL +A + A + YL P P+V RN++ N+L ++Y K+ DF LS+ + T +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLS 195
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282
+ +A G+ E+ APE L NEK+DVYSFG +L L T + G+L+ + F
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
R+E I N + +I G C ++ RP+ + L
Sbjct: 256 KRLE--IPRNLNPQVAAIIEG--------------------CWTNEPWKRPSFATIMDLL 293
Query: 343 RQMYRTSV 350
R + +++V
Sbjct: 294 RPLIKSAV 301
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 38/245 (15%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
+ S +NH +I+KL G + + P G LY L P+ + +L++
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCG------DLYHRLLDKAHPIKWSVKLRL 127
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--EEYA---AKLFDFSLSKSIPEGKTHI 222
++ A + Y++ P P+V R++ NI Q +E A AK+ DFSLS+ H
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVH- 181
Query: 223 KASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
S +G+ ++ APE + Y EK D YSF +L +LTG G + G F
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFI 239
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
IR G + P I D C +L+ +EL C S + RP + K
Sbjct: 240 ------NMIREEG---LRPTIPED--C---PPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 341 KLRQM 345
+L ++
Sbjct: 283 ELSEL 287
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 66 AAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 115
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NIL A K+ DF ++++I + G +
Sbjct: 116 --KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 66 AAALNHPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 115
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NI+ A K+ DF ++++I + G +
Sbjct: 116 --KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 83 AAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 132
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NI+ A K+ DF ++++I + G +
Sbjct: 133 --KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 66 AAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 115
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NI+ A K+ DF ++++I + G +
Sbjct: 116 --KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 66 AAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 115
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NI+ A K+ DF ++++I + G +
Sbjct: 116 --KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 111 ASQMNHKSILKLIGCCLEAEMPA-----LVYEPAGYCTLADRLY--GPLQTHLEPLLLTH 163
A+ +NH +I+ + EAE PA +V E TL D ++ GP+
Sbjct: 66 AAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--------- 115
Query: 164 RLKVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTH 221
K A+E A+A L F ++ R+++P NI+ A K+ DF ++++I + G +
Sbjct: 116 --KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + IG+ ++ +PE + ++DVYS G +L +LTG
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
RL +A + A + YL P P+V R+++ N+L ++Y K+ DF LS+ + +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLX 195
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282
+ A G+ E+ APE L NEK+DVYSFG +L L T + G+L+ + F
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
R+E I N + +I G C ++ RP+ + L
Sbjct: 256 KRLE--IPRNLNPQVAAIIEG--------------------CWTNEPWKRPSFATIMDLL 293
Query: 343 RQMYRTSV 350
R + +++V
Sbjct: 294 RPLIKSAV 301
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 38/245 (15%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
+ S +NH +I+KL G + + P G LY L P+ + +L++
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCG------DLYHRLLDKAHPIKWSVKLRL 127
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--EEYA---AKLFDFSLSKSIPEGKTHI 222
++ A + Y++ P P+V R++ NI Q +E A AK+ DF LS+ H
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVH- 181
Query: 223 KASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
S +G+ ++ APE + Y EK D YSF +L +LTG G + G F
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFI 239
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
IR G + P I D C +L+ +EL C S + RP + K
Sbjct: 240 ------NMIREEG---LRPTIPED--C---PPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 341 KLRQM 345
+L ++
Sbjct: 283 ELSEL 287
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 167 VAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAST 226
V + +AVAY+ Q R+++P N+LF E + KL DF L P+G T
Sbjct: 113 VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQT 168
Query: 227 AIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
GSL +AAPE + Y + DV+S G LL VL+ G
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 38/245 (15%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
+ S +NH +I+KL G + + P G LY L P+ + +L++
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCG------DLYHRLLDKAHPIKWSVKLRL 127
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--EEYA---AKLFDFSLSKSIPEGKTHI 222
++ A + Y++ P P+V R++ NI Q +E A AK+ DF S+ H
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVH- 181
Query: 223 KASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
S +G+ ++ APE + Y EK D YSF +L +LTG G + G F
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFI 239
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
IR G + P I D C +L+ +EL C S + RP + K
Sbjct: 240 ------NMIREEG---LRPTIPED--C---PPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 341 KLRQM 345
+L ++
Sbjct: 283 ELSEL 287
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 18/166 (10%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL--YGPLQTHLEPL 159
ER +N +SQ++H++I+ +I E + LV E TL++ + +GPL
Sbjct: 59 EREVHN---SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLS------ 109
Query: 160 LLTHRLKVAMETANAV-AYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ A+ N + ++ +V R+I+P NIL K+FDF ++K++ E
Sbjct: 110 -----VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE- 163
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + + +G++++ +PE +E TD+YS G +L +L G
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 72 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 126
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 127 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 233
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 234 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 123 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 229
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 230 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 78 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 132
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 133 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 239
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 240 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 72 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 126
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 127 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 233
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 234 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTL-----ADRLYGP----LQTHLEPLLLTH 163
Q+NH ++KL G C + L+ E A Y +L R GP L H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 164 RLKVAMETANAVAY-------LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
+ A+ + +++ +++ +V R++ NIL E K+ DF LS+ +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276
E +++K S +++ A E L Y ++DV+SFG LL ++T GG
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------LGG 250
Query: 277 SNF--FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
+ + +R+ +++ M R + + L +C + RP
Sbjct: 251 NPYPGIPPERLFNLLKTGHRME------------RPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 335 MIDVAKKLRQM 345
D++K L +M
Sbjct: 299 FADISKDLEKM 309
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 123 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 229
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 230 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 78 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 132
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 133 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 239
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 240 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
++H+++++L G L M +V E A +L DRL + H LL + A++ A
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 AVAYL---RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIG 229
+ YL RF + R++ N+L K+ DF L +++P+ H +
Sbjct: 123 GMGYLESKRF------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289
+ APE L T ++ +D + FG L + T G + GS I +++K
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNGSQ--ILHKIDK-- 229
Query: 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336
G+R R E+ Q + +C +H EDRPT +
Sbjct: 230 ------------EGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTL-----ADRLYGP----LQTHLEPLLLTH 163
Q+NH ++KL G C + L+ E A Y +L R GP L H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 164 RLKVAMETANAVAY-------LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
+ A+ + +++ +++ +V R++ NIL E K+ DF LS+ +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276
E + +K S +++ A E L Y ++DV+SFG LL ++T GG
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------LGG 250
Query: 277 SNF--FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
+ + +R+ +++ M R + + L +C + RP
Sbjct: 251 NPYPGIPPERLFNLLKTGHRME------------RPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 335 MIDVAKKLRQM 345
D++K L +M
Sbjct: 299 FADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTL-----ADRLYGP----LQTHLEPLLLTH 163
Q+NH ++KL G C + L+ E A Y +L R GP L H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 164 RLKVAMETANAVAY-------LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
+ A+ + +++ +++ +V R++ NIL E K+ DF LS+ +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276
E + +K S +++ A E L Y ++DV+SFG LL ++T GG
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------LGG 250
Query: 277 SNF--FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
+ + +R+ +++ M R + + L +C + RP
Sbjct: 251 NPYPGIPPERLFNLLKTGHRME------------RPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 335 MIDVAKKLRQM 345
D++K L +M
Sbjct: 299 FADISKDLEKM 309
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V RN+ N + ++ K+ DF +++ I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 233
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + RPT ++
Sbjct: 234 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 338 VAKKLR 343
+ L+
Sbjct: 282 IVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V RN+ N + ++ K+ DF +++ I E
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 234
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + RPT ++
Sbjct: 235 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPNMRPTFLE 282
Query: 338 VAKKLR 343
+ L+
Sbjct: 283 IVNLLK 288
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 28/254 (11%)
Query: 83 RDRGPILVMKYRKSVRYASERCF-NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141
R+ G ++VMK ++R F + + H ++LK IG + + + E
Sbjct: 32 RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201
TL G +++ + R+ A + A+ +AYL ++ R++ N L +E
Sbjct: 92 GTLR----GIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVREN 144
Query: 202 YAAKLFDFSLS------KSIPEGKTHIKAS------TAIGSLEFAAPEYLTTGYYNEKTD 249
+ DF L+ K+ PEG +K T +G+ + APE + Y+EK D
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD 204
Query: 250 VYSFGKLLLVLLTGRTIG---HLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRS 306
V+SFG ++L + GR +L R G N + ++++ N + P+ V R
Sbjct: 205 VFSFG-IVLCEIIGRVNADPDYLPRTMDFGLN--VRGFLDRYCPPNCPPSFFPITV--RC 259
Query: 307 CFRKEEKLQAYVEL 320
C EK ++V+L
Sbjct: 260 CDLDPEKRPSFVKL 273
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 230
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + + RPT ++
Sbjct: 231 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 338 VAKKLR 343
+ L+
Sbjct: 279 IVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 233
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + + RPT ++
Sbjct: 234 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 338 VAKKLR 343
+ L+
Sbjct: 282 IVNLLK 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 118
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + RN+ NIL + E K+ DF L+K +P+ K + K
Sbjct: 119 QYTSQICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 233
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + RPT ++
Sbjct: 234 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 338 VAKKLR 343
+ L+
Sbjct: 282 IVNLLK 287
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPEYLTTGYY 244
+++R+++P NIL EE KL DF LSK SI K KA + G++E+ APE + +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEVVNRRGH 203
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D +SFG L+ +LTG
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPEYLTTGYY 244
+++R+++P NIL EE KL DF LSK SI K KA + G++E+ APE + +
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEVVNRRGH 204
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D +SFG L+ +LTG
Sbjct: 205 TQSADWWSFGVLMFEMLTG 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 233
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + + RPT ++
Sbjct: 234 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 338 VAKKLR 343
+ L+
Sbjct: 282 IVNLLK 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 232
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + + RPT ++
Sbjct: 233 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLE 280
Query: 338 VAKKLR 343
+ L+
Sbjct: 281 IVNLLK 286
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPEYLTTGYY 244
+++R+++P NIL EE KL DF LSK SI K KA + G++E+ APE + +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEVVNRRGH 203
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D +SFG L+ +LTG
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
P L +++A E A+ +AYL + V R++ N + ++ K+ DF +++ I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ K + + + APE L G + +D++SFG +L ++ LA
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW---------EITSLAEQPY 233
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337
++V KF+ GY++ + + + +L C + + RPT ++
Sbjct: 234 QGLSNEQVLKFVMDGGYLD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 338 VAKKLR 343
+ L+
Sbjct: 282 IVNLLK 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 173
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 224
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + +EL C ++ + RP+
Sbjct: 225 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLLELMRMCWQYNPKMRPSF 272
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 273 LEIISSIKE 281
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
+ +K KS +A E+ + + S + H++I+ L+G C ++ E Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 146 DRLYGPLQTHLE-----PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200
+ L + L+ PL L L + + A +A+L + + R++ N+L
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 195
Query: 201 EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVL 260
+ AK+ DF L++ I +I A +++ APE + Y ++DV+S+G LL +
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 261 LT 262
+
Sbjct: 256 FS 257
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 86
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T + A +++ APE L ++ K+DV++FG L
Sbjct: 141 LVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP-----VIVGDRSCFRKE 311
L +AT G + Y IDP ++ D R E
Sbjct: 200 LW------------EIATYG--------------MSPYPGIDPSQVYELLEKDYRMERPE 233
Query: 312 EKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
+ EL C + DRP+ ++ + M++ S
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T + A +++ APE L ++ K+DV++FG L
Sbjct: 141 LVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP-----VIVGDRSCFRKE 311
L +AT G + Y IDP ++ D R E
Sbjct: 200 LW------------EIATYG--------------MSPYPGIDPSQVYELLEKDYRMERPE 233
Query: 312 EKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
+ EL C + DRP+ ++ + M++ S
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 233
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 234 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 281
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 282 LEIISSIKE 290
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T + A +++ APE L ++ K+DV++FG L
Sbjct: 141 LVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP-----VIVGDRSCFRKE 311
L +AT G + Y IDP ++ D R E
Sbjct: 200 LW------------EIATYG--------------MSPYPGIDPSQVYELLEKDYRMERPE 233
Query: 312 EKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
+ EL C + DRP+ ++ + M++ S
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
+ +K KS +A E+ + + S + H++I+ L+G C ++ E Y L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 146 DRLYGPLQTHLE-----PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200
+ L + L+ PL L L + + A +A+L + + R++ N+L
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 187
Query: 201 EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVL 260
+ AK+ DF L++ I +I A +++ APE + Y ++DV+S+G LL +
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 261 LT 262
+
Sbjct: 248 FS 249
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALV----YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM 169
+ H+ I+K GCC + +L Y P G +L D Y P + + L L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG--SLRD--YLPRHS----IGLAQLLLFAQ 124
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIG 229
+ +AYL Q + RN+ N+L + K+ DF L+K++PEG + +
Sbjct: 125 QICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 230 SLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE L + +DV+SFG L LLT
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + RN+ N
Sbjct: 296 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARNC 349
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 350 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 408
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 409 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 447
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 448 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 233
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 234 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 281
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 282 LEIISSIKE 290
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 334
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + RN+ N
Sbjct: 335 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARNC 388
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 389 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 447
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 448 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 486
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 487 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 233 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 292
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + RN+ N
Sbjct: 293 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARNC 346
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 347 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 405
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 406 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 444
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 445 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALV----YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM 169
+ H+ I+K GCC + +L Y P G +L D Y P + + L L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG--SLRD--YLPRHS----IGLAQLLLFAQ 124
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIG 229
+ +AYL Q + RN+ N+L + K+ DF L+K++PEG + +
Sbjct: 125 QICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 230 SLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE L + +DV+SFG L LLT
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QAHAERIDHIKLL 120
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 121 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 226
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 227 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 274
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 275 LEIISSIKE 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 230
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 231 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 278
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 279 LEIISSIKE 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 261
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 262 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 309
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 310 LEIISSIKE 318
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 232
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 233 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 280
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 281 LEIISSIKE 289
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 188
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 229
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 230 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 277
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 278 LEIISSIKE 286
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 64 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 123
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 180
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 61 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 120
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 121 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 177
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P NIL EE KL DF LSK + + KA + G++E+ APE + ++
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEK--KAYSFCGTVEYMAPEVVNRQGHS 208
Query: 246 EKTDVYSFGKLLLVLLTG 263
D +S+G L+ +LTG
Sbjct: 209 HSADWWSYGVLMFEMLTG 226
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 76 ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135
++++G+ ++ + + R+ + E +++H +++L G CLE LV
Sbjct: 22 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
+E + L+D L +T L + ++ +AYL V+ R++ N
Sbjct: 81 FEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARN 133
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
L E K+ DF +++ + + + T +++A+PE + Y+ K+DV+SFG
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 256 LLLVLLTGRTIGHLSR 271
L+ + + I + +R
Sbjct: 193 LMWEVFSEGKIPYENR 208
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 57 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 116
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 117 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 173
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP 131
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 188
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 65 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 124
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 181
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 124
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 125 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 232
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 233 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 280
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 281 LEIISSIKE 289
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 117
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 118 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 188
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 117
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 118 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 120
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 121 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 122
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 123 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 116
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 117 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 123
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 124 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 76 ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135
++++G+ ++ + + R+ + E +++H +++L G CLE LV
Sbjct: 25 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83
Query: 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
+E + L+D L +T L + ++ +AYL V+ R++ N
Sbjct: 84 FEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARN 136
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
L E K+ DF +++ + + + T +++A+PE + Y+ K+DV+SFG
Sbjct: 137 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGV 195
Query: 256 LLLVLLTGRTIGHLSR 271
L+ + + I + +R
Sbjct: 196 LMWEVFSEGKIPYENR 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 135
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 136 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 117
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 118 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 135
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 136 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 95 KSVRYASERCFNN----IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRL 148
K +++++E + I + H +I+K G C A L+ E Y +L D L
Sbjct: 43 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102
Query: 149 YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208
Q H E + L+ + + YL + + R++ NIL + E K+ D
Sbjct: 103 ----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGD 155
Query: 209 FSLSKSIPEGKTHIKASTAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
F L+K +P+ K K S F APE LT ++ +DV+SFG +L L T
Sbjct: 156 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y P E L + A + A + YL + + R++ N+L E+
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 229
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 239
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 287
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 288 LEIISSIKE 296
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N E++ K+ DF +++ I
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 226
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + +EL C ++ + RP+
Sbjct: 227 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLLELMRMCWQYNPKMRPSF 274
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 275 LEIISSIKE 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 156 LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L P L+ +++A E A+ +AYL V R++ N + E++ K+ DF +++ I
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
E + K + + + +PE L G + +DV+SFG +L + T LA
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQ 239
Query: 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335
++V +F+ G ++ + + EL C ++ + RP+
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLD------------KPDNCPDMLFELMRMCWQYNPKMRPSF 287
Query: 336 IDVAKKLRQ 344
+++ +++
Sbjct: 288 LEIISSIKE 296
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 110
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 111 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 221
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 222 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 265
Query: 342 L 342
L
Sbjct: 266 L 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 76 ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135
++++G+ ++ + + R+ + E +++H +++L G CLE LV
Sbjct: 22 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
+E + L+D L +T L + ++ +AYL V+ R++ N
Sbjct: 81 FEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARN 133
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
L E K+ DF +++ + + + T +++A+PE + Y+ K+DV+SFG
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 256 LLLVLLTGRTIGHLSR 271
L+ + + I + +R
Sbjct: 193 LMWEVFSEGKIPYENR 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 121
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 122 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 110
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 111 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 221
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 222 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 265
Query: 342 L 342
L
Sbjct: 266 L 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 107
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 108 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 218
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 219 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 262
Query: 342 L 342
L
Sbjct: 263 L 263
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 115
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 116 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 171
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 226
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 227 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 270
Query: 342 L 342
L
Sbjct: 271 L 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 113
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 114 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 169
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 170 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 224
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 225 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 268
Query: 342 L 342
L
Sbjct: 269 L 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 138
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 139 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 194
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 195 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 249
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 250 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 293
Query: 342 L 342
L
Sbjct: 294 L 294
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L D L Q H E + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLL 148
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 149 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 76 ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135
++++G+ ++ + + R+ + E +++H +++L G CLE LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
+E + L+D L +T L + ++ +AYL V+ R++ N
Sbjct: 79 FEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARN 131
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
L E K+ DF +++ + + + T +++A+PE + Y+ K+DV+SFG
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGV 190
Query: 256 LLLVLLTGRTIGHLSR 271
L+ + + I + +R
Sbjct: 191 LMWEVFSEGKIPYENR 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKYSLDL 112
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 113 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 168
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 169 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 223
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 224 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 267
Query: 342 L 342
L
Sbjct: 268 L 268
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALV----YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM 169
+ H+ I+K GCC +A +L Y P G +L D Y P + + L L A
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLG--SLRD--YLPRHS----IGLAQLLLFAQ 141
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIG 229
+ +AYL Q + R++ N+L + K+ DF L+K++PEG +
Sbjct: 142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 230 SLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE L + +DV+SFG L LLT
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 40/279 (14%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y+G + + +K K E ++ H ++++L+G C
Sbjct: 48 VYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC--------TL 99
Query: 137 EPAGYCTLADRLYGPLQTHL-----EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI 191
EP Y YG L +L E + L +A + ++A+ YL + + R++
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDL 156
Query: 192 EPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVY 251
N L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV+
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 252 SFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF-IRSNGYMNIDPVIVGDRSCFRK 310
+FG LL + T G S + D + + + GY P C K
Sbjct: 216 AFGVLLWEIAT-----------YGMSPYPGIDLSQVYDLLEKGYRMEQP-----EGCPPK 259
Query: 311 EEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C S DRP+ + + M+ S
Sbjct: 260 ------VYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S++NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 256
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 257 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 300
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 202 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 240
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 95 KSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY--GPL 152
K++ E +N I ++H +I+KL V+E Y L Y G L
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFD----------VFEDKKYFYLVTEFYEGGEL 133
Query: 153 QTHLEPLLLTHRL------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA--- 203
E ++ H+ + + + + YL +V R+I+P NIL + + +
Sbjct: 134 ---FEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLN 187
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
K+ DF LS + K +G+ + APE L Y NEK DV+S G ++ +LL G
Sbjct: 188 IKIVDFGLSSFFSK---DYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S++NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 270
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 271 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 314
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 42 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 101
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 102 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 155
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 156 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 214
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 215 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 253
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 254 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL---------YGPLQTHLEPLLLTHR 164
+H +++ L+G C + P +V E + L+ L Y P + + L L H
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ + + A + +L + + R++ NIL E+ K+ DF L++ I + ++
Sbjct: 151 IXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
A L++ APE + Y ++DV+SFG LL + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 202 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 240
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHL----EPLLLTHRLKVA 168
Q+++ I++LIG C +AE LV E AG GPL L E + +++ ++
Sbjct: 66 QLDNPYIVRLIGVC-QAEALMLVMEMAGG--------GPLHKFLVGKREEIPVSNVAELL 116
Query: 169 METANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA-STA 227
+ + + YL + V R++ N+L + AK+ DF LSK++ ++ A S
Sbjct: 117 HQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287
L++ APE + ++ ++DV+S+G + + + G G V
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYG---VTMWEALSYGQKPYKKMKGPE------VMA 224
Query: 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346
FI M P E + Y L C + EDRP + V +++R Y
Sbjct: 225 FIEQGKRMECPP-----------ECPPELYA-LMSDCWIYKWEDRPDFLTVEQRMRACY 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 202 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 240
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 202 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 240
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 30/247 (12%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
+E Q+++ I++LIG C +AE LV E AG L L G E +
Sbjct: 380 TEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG----KREEIP 434
Query: 161 LTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+++ ++ + + + YL + V RN+ N+L + AK+ DF LSK++ +
Sbjct: 435 VSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491
Query: 221 HIKA-STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279
+ A S L++ APE + ++ ++DV+S+G + + + G G
Sbjct: 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG---VTMWEALSYGQKPYKKMKGPE- 547
Query: 280 FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVA 339
V FI M P E + Y L C + EDRP + V
Sbjct: 548 -----VMAFIEQGKRMECPP-----------ECPPELYA-LMSDCWIYKWEDRPDFLTVE 590
Query: 340 KKLRQMY 346
+++R Y
Sbjct: 591 QRMRACY 597
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 145 LVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 204 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 242
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 148 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 207 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 245
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 113
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ YL V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 114 HQVSMGMK------YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 219
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 220 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 263
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 264 LRNYYYDVV 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 202 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 240
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 148 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 207 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 245
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 145 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 204 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 242
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
+ +K KS +A E+ + + S + H++I+ L+G C P LV YC
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVI--TEYCCYG 135
Query: 146 DRL--------------YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI 191
D L Y P E L L + + A +A+L + + R++
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDV 192
Query: 192 EPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVY 251
N+L + AK+ DF L++ I +I A +++ APE + Y ++DV+
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 252 SFGKLLLVLLT 262
S+G LL + +
Sbjct: 253 SYGILLWEIFS 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 89
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 90 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 143
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 144 LVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 203 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 241
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 242 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
+++H +++L G CLE LV+E + L+D L +T L + ++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 133
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+AYL V+ R++ N L E K+ DF +++ + + + T ++
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 189
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271
+A+PE + Y+ K+DV+SFG L+ + + I + +R
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKFSLDL 110
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 111 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTY 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 221
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 222 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 265
Query: 342 L 342
L
Sbjct: 266 L 266
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 111
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ YL V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 112 HQVSMGMK------YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 217
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 218 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 261
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 262 LRNYYYDVV 270
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKFSLDL 490
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 491 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTY 546
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 601
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 602 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 645
Query: 342 L 342
L
Sbjct: 646 L 646
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 145 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 204 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 242
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 243 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 33 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 93 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 146
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 147 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 206 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 244
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 73 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 123
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ YL V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 124 HQVSMGMK------YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 229
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 230 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 273
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 274 LRNYYYDVV 282
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 117
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ YL V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 118 HQVSMGMK------YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 223
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 224 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 267
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 268 LRNYYYDVV 276
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 30/230 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q +H I+KLIG E V+ CTL + L LQ L L + A + +
Sbjct: 67 QFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKFSLDLASLILYAYQLS 121
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
A+AYL + V R+I N+L KL DF LS+ + E T KAS ++
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIK 177
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + + +DV+ FG + +L H + G N + R+E R
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGERLP 232
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
N P + L KC ++ RP ++ +L
Sbjct: 233 MPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQL 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 175 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 282
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 283 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 326
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGK-THIKASTAIGSLEFAAPEYLTTGY 243
+++R+++P NI+ + KL DF L K SI +G TH T G++E+ APE L
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----TFCGTIEYMAPEILMRSG 197
Query: 244 YNEKTDVYSFGKLLLVLLTG----------RTIGHLSRLATGGSNFFIT---DRVEKFIR 290
+N D +S G L+ +LTG +TI + + + D ++K ++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 291 SNGY--MNIDPVIVGDRSC---FRK---EEKLQAYVELAFKCLSHSAED 331
N + P G+ FR EE L VE FK L S ED
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEED 306
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 133
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ + V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 134 HQVSMGMKYLEESNF---------VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 239
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 240 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 283
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 284 LRNYYYDVV 292
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 133
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ + V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 134 HQVSMGMKYLEESNF---------VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 239
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 240 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 283
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 284 LRNYYYDVV 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------------L 159
+H +++ L+G C + P +V +C +G L T+L L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVI--VEFCK-----FGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 142 TLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDP 198
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 155 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 262
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 263 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 306
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 81 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 131
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ + V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 132 HQVSMGMKYLEESNF---------VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 237
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 238 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 281
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 282 LRNYYYDVV 290
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 165 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 272
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 273 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 316
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 270
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 271 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 256
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 257 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 270
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 271 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 314
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ ++++ +M HK+I+ L+G C + ++ E A L + L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
+ P E L + A + A + YL + + R++ N+L E+
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV 188
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I K + +++ APE L Y ++DV+SFG LL + T
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 148 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 255
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 256 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 299
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 30/241 (12%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E+ + Q +H I+KLIG E V+ CTL + L LQ L L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGE-LRSFLQVRKFSLDL 490
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A + + A+AYL + V R+I N+L KL DF LS+ + E T+
Sbjct: 491 ASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTY 546
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KAS +++ APE + + +DV+ FG + +L H + G N +
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNNDV 601
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
R+E R N P + L KC ++ RP ++ +
Sbjct: 602 IGRIENGERLPMPPNCPPTLYS----------------LMTKCWAYDPSRRPRFTELKAQ 645
Query: 342 L 342
L
Sbjct: 646 L 646
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 108 IVFASQMNHKSILKLIGCCLEA--EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I + H +I+K G C A L+ E Y +L R Y LQ H E + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL--REY--LQKHKERIDHIKLL 120
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+ + + YL + + R++ NIL + E K+ DF L+K +P+ K K
Sbjct: 121 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 226 TAIGSLEFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
S F APE LT ++ +DV+SFG +L L T
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 256
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 257 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 148 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 255
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 256 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 299
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 76 ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135
++++G+ ++ + + R+ + E +++H +++L G CLE LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
E + L+D L +T L + ++ +AYL V+ R++ N
Sbjct: 82 TEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARN 134
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
L E K+ DF +++ + + + T +++A+PE + Y+ K+DV+SFG
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGV 193
Query: 256 LLLVLLTGRTIGHLSR 271
L+ + + I + +R
Sbjct: 194 LMWEVFSEGKIPYENR 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 189 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 296
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 297 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 340
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 140 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 247
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 248 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 291
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLEPLLLTHRLKVAM 169
S+ NH++I++ IG L++ ++ E L R P + L + L VA
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ A YL + R+I N L AK+ DF +++ I + K
Sbjct: 166 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
A+ +++ PE G + KTD +SFG LL + + + + S+ SN V
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SN----QEVL 273
Query: 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
+F+ S G M DP +R + +C H EDRP + +++
Sbjct: 274 EFVTSGGRM--DPPKNCPGPVYR----------IMTQCWQHQPEDRPNFAIILERI 317
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 89
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 90 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 143
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T + A +++ APE L ++ K+DV++FG L
Sbjct: 144 LVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 203 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 241
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 242 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 112
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 168
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 169 ---TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 186 VVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
VV R+++P N+LF +E K+ DF ++ P +K T +L +AAPE L
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK--TPCFTLHYAAPELLNQN 184
Query: 243 YYNEKTDVYSFGKLLLVLLTGRT 265
Y+E D++S G +L +L+G+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQV 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 112
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 168
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 169 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 110
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 93
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 207 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 245
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347
EL C + DRP+ ++ + M++
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 60 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 115
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 116 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 170
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 224
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 225 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 252
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 117
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ YL V R++ N+L ++ AK+ DF LSK++ +
Sbjct: 118 HQVSMGMK------YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG +++ + G GS +
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG---VLMWEAFSYGQKPYRGMKGSE--V 223
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 224 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 267
Query: 342 LRQMYRTSV 350
LR Y V
Sbjct: 268 LRNYYYDVV 276
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 28/273 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T + A +++ APE L ++ K+DV++FG L
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 207 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 245
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349
EL C + DRP+ ++ + M++ S
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 58 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 113
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 114 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 168
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 222
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 223 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 148 LVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L + T G S + D + + ++ D R E +
Sbjct: 207 LWEIAT-----------YGMSPYPGIDLSQVY----------ELLEKDYRMERPEGCPEK 245
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347
EL C + DRP+ ++ + M++
Sbjct: 246 VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 109
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 108
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K A T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 109 LNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 169 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 107
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +C LY L + +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQ---WCE-GSSLYHHLHASETKFEMKKLI 123
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 226 TAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
GS+ + APE + + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNR 231
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRS-CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
D++ + + G ++ P + RS C ++ ++L A +CL ++RP+ + +
Sbjct: 232 DQIIEMV---GRGSLSPDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPRILAE 282
Query: 342 LRQMYR 347
+ ++ R
Sbjct: 283 IEELAR 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
A E A+ YL + +++R+++P NIL + K+ DF +K +P+ +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL----- 163
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
G+ ++ APE ++T YN+ D +SFG L+ +L G T
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSRFDE 111
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 112 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+T G+L++ PE + ++EK D++S G L L G
Sbjct: 168 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 108
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 164
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
T G+L++ PE + ++EK D++S G L L G+
Sbjct: 165 ---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 124
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 125 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 180
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 181 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y G + + +K K E ++ H ++++L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E Y L D L + + ++L L +A + ++A+ YL + + R++ N
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E + K+ DF LS+ + G T+ + A +++ APE L ++ K+DV++FG L
Sbjct: 143 LVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 257 LLVLLT 262
L + T
Sbjct: 202 LWEIAT 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 105
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 106 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 162
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 163 ----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 110
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 111 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 167
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 168 ----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------------L 159
+H +++ L+G C + P +V +C +G L T+L L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVI--VEFCK-----FGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 142 TLEHLICYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 198
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 103
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 104 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 160
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 161 ----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I + + + +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALV--YEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
+ S + H +IL+L G +A L+ Y P G +Y LQ L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRG------EVYKELQK-LSKFDEQRTA 116
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
E ANA++Y + V+ R+I+P N+L K+ DF S P + +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 169
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
T G+L++ PE + ++EK D++S G L L G+
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
+ + H +I+ L G CL+ LV E A L L G + P +L + A++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNW---AVQI 114
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA--------AKLFDFSLSKSIPEGKTHIK 223
A + YL P++ R+++ NIL ++ K+ DF L++ E K
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTK 171
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
S A G+ + APE + +++ +DV+S+G LL LLTG
Sbjct: 172 MSAA-GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSRFDE 111
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 112 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
T G+L++ PE + ++EK D++S G L L G
Sbjct: 168 ---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY--GPLQTHLEPL 159
E + Q++H +I+KL +E GY L +Y G L +
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYE----------FFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIP 216
+ A ++ + + +V R+++P N+L + ++ ++ DF LS
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---- 176
Query: 217 EGKTHIKAS----TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
TH +AS IG+ + APE L G Y+EK DV+S G +L +LL+G
Sbjct: 177 ---THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 130
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 131 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 188 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 232
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 233 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 285
Query: 345 MYRTSV 350
++ T +
Sbjct: 286 IFSTFI 291
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 34/248 (13%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +C LY L + +
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQ---WCE-GSSLYHHLHASETKFEMKKLI 111
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 112 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 169 QLS--GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 217
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRS-CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVA 339
D++ + + G ++ P + RS C ++ ++L A +CL ++RP+ +
Sbjct: 218 NRDQIIEMV---GRGSLSPDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPRIL 268
Query: 340 KKLRQMYR 347
++ ++ R
Sbjct: 269 AEIEELAR 276
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY--GPLQTHLEPL 159
E + Q++H +I+KL +E GY L +Y G L +
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYE----------FFEDKGYFYLVGEVYTGGELFDEIISR 143
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIP 216
+ A ++ + + +V R+++P N+L + ++ ++ DF LS
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---- 199
Query: 217 EGKTHIKAS----TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
TH +AS IG+ + APE L G Y+EK DV+S G +L +LL+G
Sbjct: 200 ---THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 156
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 157 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 214 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 258
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 259 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 311
Query: 345 MYRT 348
++ T
Sbjct: 312 IFST 315
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 49/245 (20%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMA--------ELGPLNKYLQQNRHVKDKNIIELV 476
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ + V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 477 HQVSMGMKYLEESNF---------VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG L+ + G GS +
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF---SYGQKPYRGMKGSE--V 582
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 583 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 626
Query: 342 LRQMY 346
LR Y
Sbjct: 627 LRNYY 631
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 157
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 158 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 215 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 259
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 260 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 312
Query: 345 MYRT 348
++ T
Sbjct: 313 IFST 316
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 136
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 137 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 194 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 238
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 239 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 291
Query: 345 MYRTSV 350
++ T +
Sbjct: 292 IFSTFI 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY--GPLQTHLEPL 159
E + Q++H +I+KL +E GY L +Y G L +
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYE----------FFEDKGYFYLVGEVYTGGELFDEIISR 144
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIP 216
+ A ++ + + +V R+++P N+L + ++ ++ DF LS
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---- 200
Query: 217 EGKTHIKAS----TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
TH +AS IG+ + APE L G Y+EK DV+S G +L +LL+G
Sbjct: 201 ---THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 133
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 134 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 189
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 190 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 138
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 139 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 196 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 240
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 241 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
Query: 345 MYRTSV 350
++ T +
Sbjct: 294 IFSTFI 299
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 49/245 (20%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------LLLT 162
Q+++ I+++IG C EAE LV E A GPL +L+ + L
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAEL--------GPLNKYLQQNRHVKDKNIIELV 475
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H++ + M+ + V R++ N+L ++ AK+ DF LSK++ + +
Sbjct: 476 HQVSMGMKYLEESNF---------VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 223 KAST-AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281
KA T +++ APE + ++ K+DV+SFG L+ + G GS +
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF---SYGQKPYRGMKGSE--V 581
Query: 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
T +EK R + C R+ +L C ++ E+RP V +
Sbjct: 582 TAMLEKGER----------MGCPAGCPRE------MYDLMNLCWTYDVENRPGFAAVELR 625
Query: 342 LRQMY 346
LR Y
Sbjct: 626 LRNYY 630
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G + +L L + +A + A
Sbjct: 236 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIA 291
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L + I E + A +
Sbjct: 292 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPI 346
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 400
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 401 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 428
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 108
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR- 164
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 165 ---TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 135
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 136 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 193 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 237
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 238 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290
Query: 345 MYRTSV 350
++ T +
Sbjct: 291 IFSTFI 296
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK------------AS 225
L + Q ++ RN++P NI E K+ DF L+K++ +K +
Sbjct: 129 LSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFG 254
+AIG+ + A E L TG+YNEK D YS G
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLG 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 76 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 123
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 184 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 138
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 139 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 196 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 240
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 241 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
Query: 345 MYRTSV 350
++ T +
Sbjct: 294 IFSTFI 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 133
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 134 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 191 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 235
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 236 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288
Query: 345 MYRTSV 350
++ T +
Sbjct: 289 IFSTFI 294
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY--GPLQTHLEPL 159
E + Q++H +I+KL +E GY L +Y G L +
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYE----------FFEDKGYFYLVGEVYTGGELFDEIISR 126
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIP 216
+ A ++ + + +V R+++P N+L + ++ ++ DF LS
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---- 182
Query: 217 EGKTHIKAS----TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
TH +AS IG+ + APE L G Y+EK DV+S G +L +LL+G
Sbjct: 183 ---THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 137
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 138 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 195 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 239
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 240 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 292
Query: 345 MYRT 348
++ T
Sbjct: 293 IFST 296
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G ++ A+V + +C LY L + +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQ---WCE-GSSLYHHLHASETKFEMKKLI 123
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 226 TAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
GS+ + APE + + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNR 231
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRS-CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341
D++ + + G ++ P + RS C ++ ++L A +CL ++RP+ + +
Sbjct: 232 DQIIEMV---GRGSLSPDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPRILAE 282
Query: 342 LRQMYR 347
+ ++ R
Sbjct: 283 IEELAR 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 137
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + YL + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 138 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 194
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 195 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 239
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 240 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 292
Query: 345 MYRTSV 350
++ T +
Sbjct: 293 IFSTFI 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 53/93 (56%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A++ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT ++ +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 60 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 115
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + RN+ NIL + + K+ DF L++ I E + A ++
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 171
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 221
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 222 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 252
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 114 MNHKSILKLIGCCLEAEMPA--LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
+ H+ I+K GCC + + LV E +L D Y P + L L A +
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQI 121
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+AYL Q + R + N+L + K+ DF L+K++PEG + + S
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 232 EFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
F APE L + +DV+SFG L LLT
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGK-THIKASTAIGSLEFAAPEYLTTGY 243
+++R+++P NI+ + KL DF L K SI +G TH G++E+ APE L
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----XFCGTIEYMAPEILMRSG 197
Query: 244 YNEKTDVYSFGKLLLVLLTG----------RTIGHLSRLATGGSNFFIT---DRVEKFIR 290
+N D +S G L+ +LTG +TI + + + D ++K ++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 291 SNGY--MNIDPVIVGDRSC---FRK---EEKLQAYVELAFKCLSHSAED 331
N + P G+ FR EE L VE FK L S ED
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEED 306
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 114 MNHKSILKLIGCCLEAEMPA--LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
+ H+ I+K GCC + + LV E +L D Y P + L L A +
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQI 120
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+AYL Q + R + N+L + K+ DF L+K++PEG + + S
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 232 EFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
F APE L + +DV+SFG L LLT
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 59 KLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 114
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I + + + +
Sbjct: 115 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PI 169
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 223
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 224 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 251
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 117
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 178 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E L D L G + +L L + +A + A
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLR---LPQLVDMAAQIA 124
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 125 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 179
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 233
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 234 ---MPCPP------------ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 117
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 178 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 118
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 179 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 114
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 175 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 95 KSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADR-----LY 149
K V+Y +E+ + ++++H +I+ GC Y+P + R L+
Sbjct: 42 KRVKYNNEKAEREVKALAKLDHVNIVHYNGC-----WDGFDYDPETSSKNSSRSKTKCLF 96
Query: 150 --------GPLQTHLEP-----LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
G L+ +E L L++ + V Y+ + ++ R+++P NI
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNI 153
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
+ K+ DF L S+ K K + G+L + +PE +++ Y ++ D+Y+ G +
Sbjct: 154 FLVDTKQVKIGDFGLVTSL---KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 257 LLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQA 316
L LL H+ A S FF R D +I F K+EK
Sbjct: 211 LAELL------HVCDTAFETSKFFTDLR-------------DGII---SDIFDKKEKT-- 246
Query: 317 YVELAFKCLSHSAEDRPTMIDVAKKL 342
L K LS EDRP ++ + L
Sbjct: 247 ---LLQKLLSKKPEDRPNTSEILRTL 269
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 124
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 185 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 124
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 185 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ +AYLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 118 KVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 171
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + APE L +Y+ ++D++S G L+ L GR
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 124
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 185 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 118
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 179 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q +H +I++LIG C + + +V E L+T L + L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVME----LVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+ YL + + R++ N L E+ K+ DF +S+ +G ++
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLL 257
+ APE L G Y+ ++DV+SFG LL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILL 305
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTL- 144
+ +K KS +A E+ + + S + H++I+ L+G C ++ E Y L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 145 ------ADRLYGPL-----------QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVV 187
A+ + GP + PL L L + + A +A+L + +
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCI 180
Query: 188 FRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEK 247
R++ N+L + AK+ DF L++ I +I A +++ APE + Y +
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 248 TDVYSFGKLLLVLLT 262
+DV+S+G LL + +
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
+V R+++P N+L + K+ DF LS + +G T+ GS +AAPE + Y
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYA 185
Query: 245 NEKTDVYSFGKLLLVLLTGR 264
+ DV+S G +L V+L GR
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALVY-EPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + ++
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 132
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 193 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 132
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 193 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 76 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 123
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 184 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 84 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 131
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 132 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 192 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 84 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 131
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 132 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 192 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK------------AS 225
L + Q ++ R+++P NI E K+ DF L+K++ +K +
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFG 254
+AIG+ + A E L TG+YNEK D+YS G
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLG 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 89 LVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL 148
++ K + + E + Q++H +I KL +E GY L +
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE----------FFEDKGYFYLVGEV 107
Query: 149 Y--GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYA 203
Y G L + + A ++ + + +V R+++P N+L + ++
Sbjct: 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDAN 167
Query: 204 AKLFDFSLSKSIPEGKTHIKAS----TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLV 259
++ DF LS TH +AS IG+ + APE L G Y+EK DV+S G +L +
Sbjct: 168 IRIIDFGLS-------THFEASKKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYI 219
Query: 260 LLTG 263
LL+G
Sbjct: 220 LLSG 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 132
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 193 R-----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 114
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 175 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALVY-EPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + ++
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 88 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 135
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 136 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 196 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTL------------ADRLYGPLQTHLEP---- 158
+H++I+ L+G C + L++E Y L D + Q LE
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 159 --LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
L L A + A + +L F + V R++ N+L K+ DF L++ I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE L G Y K+DV+S+G LL + +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK------------AS 225
L + Q ++ R+++P NI E K+ DF L+K++ +K +
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFG 254
+AIG+ + A E L TG+YNEK D+YS G
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLG 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + +
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 110
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + ++
Sbjct: 186 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ A L++ APE + Y ++DV+SFG LL
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 277
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 62 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 117
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 118 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 172
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 226
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 227 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 254
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 114
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 175 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 62 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 109
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 110 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 170 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 118
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 179 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 114
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 175 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 75 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 122
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 123 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 183 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 63 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 110
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 111 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 171 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 112
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 168
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 169 ---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + ++
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 117
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 178 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 117
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 178 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 64 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 111
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 112 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 172 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------------- 158
+H +++ L+G C + P +V +C +G L T+L
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVI--VEFCK-----FGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 159 --LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ ++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 119
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 180 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 62 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 109
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 110 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 170 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 108
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 164
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 165 ---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 95 KSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRLYGPLQ 153
KS R + + ++++ ++H I++L+G C + + + Y P G +L D + +
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLG--SLLDHV----R 106
Query: 154 TH---LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
H L P LL L ++ A + YL +V RN+ N+L + ++ DF
Sbjct: 107 QHRGALGPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFG 160
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ +P + S A +++ A E + G Y ++DV+S+G + L+T
Sbjct: 161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 108
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 169 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 108
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 169 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 150 GPLQTHLEPLLLTHRLKVAMET---ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206
G L H++ H+ ++ T A + L+F + +V+R+++ NIL ++ K+
Sbjct: 103 GDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 159
Query: 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
DF + K G K + G+ ++ APE L YN D +SFG LL +L G++
Sbjct: 160 ADFGMCKENMLGDA--KTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
Query: 267 GH 268
H
Sbjct: 218 FH 219
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 109
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ +F S P +
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR- 165
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 166 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 107
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + +
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALVY-EPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + +
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 118
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 179 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP---------------- 158
+H +++ L+G C + P +V +C +G L T+L
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVI--VEFCK-----FGNLSTYLRSKRNEFVPYKEAPEDLY 143
Query: 159 ---LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ +++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 139
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 140 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 197 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 241
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 242 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 294
Query: 345 MYRT 348
++ T
Sbjct: 295 IFST 298
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 150 GPLQTHLEPLLLTHRLKVAMET---ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206
G L H++ H+ ++ T A + L+F + +V+R+++ NIL ++ K+
Sbjct: 104 GDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 160
Query: 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
DF + K G K + G+ ++ APE L YN D +SFG LL +L G++
Sbjct: 161 ADFGMCKENMLGDA--KTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
Query: 267 GH 268
H
Sbjct: 219 FH 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 119
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ + T + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 180 RHTADEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 108
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 169 R-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 119
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ + T + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 180 RHTADEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 95 KSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRLYGPLQ 153
KS R + + ++++ ++H I++L+G C + + + Y P G R + +
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQH---R 127
Query: 154 THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213
L P LL L ++ A + YL +V RN+ N+L + ++ DF ++
Sbjct: 128 GALGPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+P + S A +++ A E + G Y ++DV+S+G + L+T
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 107
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 290
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 291 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 345
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVER---- 396
Query: 292 NGYMNIDPVIVGDR------SCFRKE-------EKLQAYVELAF 322
GY P + C+RKE E LQA++E F
Sbjct: 397 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 110
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ +F S P +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR- 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 107
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ---TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 106
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ----AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q +H +I++LIG C + + +V E L+T L + L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVME----LVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+ YL + + R++ N L E+ K+ DF +S+ +G ++
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLL 257
+ APE L G Y+ ++DV+SFG LL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILL 305
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 119
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ + T + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 180 RHTADEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 290
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 291 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 345
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVER---- 396
Query: 292 NGYMNIDPVIVGDR------SCFRKE-------EKLQAYVELAF 322
GY P + C+RKE E LQA++E F
Sbjct: 397 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 139
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 140 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 197 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 241
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 242 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 294
Query: 345 MYRT 348
++ T
Sbjct: 295 IFST 298
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 106
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ----TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 138
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 139 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 196 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 240
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 241 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
Query: 345 MYRT 348
++ T
Sbjct: 294 IFST 297
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 88 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 135
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 136 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 196 R-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 138
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 139 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 196 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 240
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 241 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
Query: 345 MYRT 348
++ T
Sbjct: 294 IFST 297
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 290
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 291 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 345
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 399
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 400 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 427
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 143
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 144 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 201 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 245
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 246 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 298
Query: 345 MYRT 348
++ T
Sbjct: 299 IFST 302
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKV 167
+ +H ++L L+G CL +E LV P Y D R + +TH P + +
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETH-NPTV-KDLIGF 136
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THIKA 224
++ A + +L + V R++ N + E++ K+ DF L++ + + + H K
Sbjct: 137 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 194 GAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY---PD 238
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 239 VNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 291
Query: 345 MYRT 348
++ T
Sbjct: 292 IFST 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPL--LLTHRL 165
+ +H ++L L+G CL +E LV P Y D R + +TH + L+ L
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLP--YMKHGDLRNFIRNETHNPTVKDLIGFGL 199
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK---THI 222
+VA ++F + V R++ N + E++ K+ DF L++ + + + H
Sbjct: 200 QVAKG-------MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 252
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
K + +++ A E L T + K+DV+SFG LL L+T G +
Sbjct: 253 KTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----------RGAPPY--- 297
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
V F +I ++ R + E E+ KC AE RP+ ++ ++
Sbjct: 298 PDVNTF-------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350
Query: 343 RQMYRT 348
++ T
Sbjct: 351 SAIFST 356
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 52/93 (55%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A++ +G+
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 70 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 125
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I E + A ++
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 181
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 231
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 232 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 119
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I E + A ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 175
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 225
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 226 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 256
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 69 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 124
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I E + A ++
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 180
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 230
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 231 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 261
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 186 VVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P NIL + ++ K+ DF LS + + K IG+ + APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-G 197
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y+EK DV+S G +L +LL+G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
L++ + V Y+ + ++ R+++P NI + K+ DF L S+ K K
Sbjct: 139 LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKR 192
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284
+ + G+L + +PE +++ Y ++ D+Y+ G +L LL H+ A S FF
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVCDTAFETSKFF---- 242
Query: 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
++ I+ D F K+EK L K LS EDRP ++ + L
Sbjct: 243 ----------TDLRDGIISD--IFDKKEKT-----LLQKLLSKKPEDRPNTSEILRTL 283
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + +A + A
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQIA 373
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 374 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 428
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 482
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 483 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 510
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 91 MKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYG 150
MK S + E + +H ++++L+G C+E + P L YG
Sbjct: 70 MKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI---PKPMVILPFMKYG 126
Query: 151 PLQTHL---------EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201
L T+L + + L LK ++ A + YL + + R++ N + +++
Sbjct: 127 DLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDD 183
Query: 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254
+ DF LSK I G + + A +++ A E L Y K+DV++FG
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 68 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 184
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 185 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 59 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 114
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I E + A ++
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 170
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 220
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 221 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 251
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L
Sbjct: 113 LNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLC 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 109
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 165
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 166 ---XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 28/246 (11%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 135
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 226 TAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNR 243
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
D++ F+ GY++ D V +C + ++L A +CL ++RP + +
Sbjct: 244 DQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILASI 295
Query: 343 RQMYRT 348
+ R+
Sbjct: 296 ELLARS 301
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 71 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 187
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 188 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 186 VVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P NIL + ++ K+ DF LS + + K IG+ + APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-G 197
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y+EK DV+S G +L +LL+G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 186 VVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P NIL + ++ K+ DF LS + + K IG+ + APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-G 197
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y+EK DV+S G +L +LL+G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 52/93 (55%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A++ +G+
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 110
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ---DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKASTAI 228
+AV YL R G +V R+++P N+L+ EE + DF LSK EGK + STA
Sbjct: 131 DAVYYLHRMG----IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV-MSTAC 183
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+ + APE L Y++ D +S G + +LL G
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
VV R+++P N+L AK+ DF LS + +G+ T+ GS +AAPE ++ Y
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYA 188
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D++S G +L LL G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 119
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 175
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 225
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 226 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 256
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 115 NHKSILKLIGCCLEAEMPALV-YEPAGYCTLADRL-----------YGPLQTHLEPLLLT 162
+H +++ L+G C + P +V E + L+ L P + + L L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
H + + + A + +L + + R++ NIL E+ K+ DF L++ I + +
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G ++ L+ E Y PL T L+ L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILE-----------YAPLGTVYRELQKLSKFDE 107
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 108 QRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 163
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 109
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 167 ----XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 66 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNV 182
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 183 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI-PEGKTHIKASTAIGSLEFAAP 236
L F V+ RNI+ NIL + + KL DF I PE K ST +G+ + AP
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAP 186
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E +T Y K D++S G + + ++ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + ++ + A
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLR---LPQLVDMSAQIA 121
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I E + A +
Sbjct: 122 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPI 176
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 230
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 231 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 258
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 28/246 (11%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 73 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 127
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ +
Sbjct: 128 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 226 TAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNR 235
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
D++ F+ GY++ D V +C + ++L A +CL ++RP + +
Sbjct: 236 DQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILASI 287
Query: 343 RQMYRT 348
+ R+
Sbjct: 288 ELLARS 293
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 65 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 120
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 176
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 226
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 227 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 257
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V+R+++P NIL + ++ D L+ +PEG+T IK +G++ + APE + Y
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VGTVGYMAPEVVKNERYT 363
Query: 246 EKTDVYSFGKLLLVLLTGRT 265
D ++ G LL ++ G++
Sbjct: 364 FSPDWWALGCLLYEMIAGQS 383
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTH 163
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFD 106
Query: 164 RLKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 164 ----XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNV 241
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 74 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 129
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I E + A ++
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIK 185
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 235
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 236 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 66 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 121
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 177
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 227
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 228 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 258
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ D+ L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 80 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 134
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 135 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 192 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 240
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 241 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 292
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 293 SIELLARS 300
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP-----------LLLTH 163
+H +I+ L+G C L E A + L D L +P L
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
L A + A + YL + + RN+ NIL E Y AK+ DF LS+ + ++K
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRG---QEVYVK 194
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + A E L Y +DV+S+G LL +++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V+R+++P NIL + ++ D L+ +PEG+T IK +G++ + APE + Y
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VGTVGYMAPEVVKNERYT 363
Query: 246 EKTDVYSFGKLLLVLLTGRT 265
D ++ G LL ++ G++
Sbjct: 364 FSPDWWALGCLLYEMIAGQS 383
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 30/185 (16%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 94 AKRTYRELRLLKHMKHENVIGLLD----------VFTPATSLEEFNDVY--LVTHLMGAD 141
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ DF L+
Sbjct: 142 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI----G 267
+ T + + + + + APE L +YN D++S G ++ LLTGRT+
Sbjct: 202 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
Query: 268 HLSRL 272
H+++L
Sbjct: 257 HINQL 261
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
+V R+++P N+L E K+ DF LS + +G T+ GS +AAPE ++ Y
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYA 190
Query: 245 NEKTDVYSFGKLLLVLLTGR 264
+ DV+S G +L V+L R
Sbjct: 191 GPEVDVWSCGVILYVMLCRR 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 28/246 (11%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 107
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 226 TAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282
GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNR 215
Query: 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342
D++ F+ GY++ D V +C + ++L A +CL ++RP + +
Sbjct: 216 DQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILASI 267
Query: 343 RQMYRT 348
+ R+
Sbjct: 268 ELLARS 273
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
+V R+++P N+L E K+ DF LS + +G T+ GS +AAPE ++ Y
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYA 189
Query: 245 NEKTDVYSFGKLLLVLLTGR 264
+ DV+S G +L V+L R
Sbjct: 190 GPEVDVWSCGVILYVMLCRR 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHR 164
+ S + H +IL+L G +A L+ E Y PL T L+ L
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILE-----------YAPLGTVYRELQKLSKFDE 133
Query: 165 LKVAM---ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ A E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 134 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR- 189
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 190 ---DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 73 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 128
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 184
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 234
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 235 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
+V R+++P N+L E K+ DF LS + +G T+ GS +AAPE ++ Y
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYA 180
Query: 245 NEKTDVYSFGKLLLVLLTGR 264
+ DV+S G +L V+L R
Sbjct: 181 GPEVDVWSCGVILYVMLCRR 200
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
+V R+++P N+L E K+ DF LS + +G T+ GS +AAPE ++ Y
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYA 184
Query: 245 NEKTDVYSFGKLLLVLLTGR 264
+ DV+S G +L V+L R
Sbjct: 185 GPEVDVWSCGVILYVMLCRR 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALV--YEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
+ S + H +IL+L G +A L+ Y P G +Y LQ L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRG------EVYKELQK-LSKFDEQRTA 116
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
E ANA++Y + V+ R+I+P N+L K+ DF S P +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----X 169
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+L++ PE + ++EK D++S G L L G+
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 135
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 193 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 241
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 242 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 293
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 294 SIELLARS 301
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 119
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF-PIK 175
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 225
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 226 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + + A+V + +C LY L + +
Sbjct: 81 NEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQ---WCE-GSSLYKHLHVQETKFQMFQLI 135
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E K+ DF L+ KS G ++
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 224 ASTAIGSLEFAAPEYLTTGYYNE---KTDVYSFGKLLLVLLTG 263
T GS+ + APE + N ++DVYS+G +L L+TG
Sbjct: 193 QPT--GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 119
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 175
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 225
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 226 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 70 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 125
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 181
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 231
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 232 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 262
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 112
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 170 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 218
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 219 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 270
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 271 SIELLARS 278
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q+ H+ +++L + + ++ E +L D L P L + L +A + A
Sbjct: 72 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIA 127
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A++ + + R++ NIL + + K+ DF L++ I + + + ++
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIK 183
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292
+ APE + G + K+DV+SFG LL ++T I + G +N + +E+
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTNPEVIQNLER----- 233
Query: 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
GY + P +C E+L + L C EDRPT
Sbjct: 234 GYRMVRP-----DNC---PEELYQLMRL---CWKERPEDRPT 264
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + + ++ R+++P NIL E+ ++ DF +K + +A+ +G+
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
++ +PE LT + +D+++ G ++ L+ G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 112
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 170 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 218
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 219 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 270
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 271 SIELLARS 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 55 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 109
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 110 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 167 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 215
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 216 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 267
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 268 SIELLARS 275
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 157 EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
EP+ + + + + A + +L + + R++ NIL E K+ DF L++ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ +++ L++ APE + Y+ K+DV+S+G LL + +
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
+ +K KS +A E+ + + S + H++I+ L+G C P LV YC
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITE--YCCYG 135
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFG--FPQPVVF--------RNIEPWN 195
D L L+ L +A TA+ L F Q + F R++ N
Sbjct: 136 D-LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
+L + AK+ DF L++ I +I A +++ APE + Y ++DV+S+G
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 256 LLLVLLT 262
LL + +
Sbjct: 255 LLWEIFS 261
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G + ++ A+V + +L L+ ++T E + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 107
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 165 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 213
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 214 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 265
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 266 SIELLARS 273
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++ H+ +++L E + +V E +L D L G +L L + ++ + A
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLR---LPQLVDMSAQIA 121
Query: 173 NAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ +AY+ R + V R++ NIL E K+ DF L++ I + + + +
Sbjct: 122 SGMAYVERMNY----VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PI 176
Query: 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291
++ APE G + K+DV+SFG LL L T + + G N + D+VE+ R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVNREVLDQVERGYR- 230
Query: 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
M P E ++ +L +C E+RPT
Sbjct: 231 ---MPCPP------------ECPESLHDLMCQCWRKEPEERPT 258
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 74 GYILYMGFLRDRGPILVMKYRKSVRYASER---CFNNIVFASQMNHKSILKLIGCCLEAE 130
G + + +R+ + + K S + ++E+ + F ++ H + ++ GC L
Sbjct: 68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 127
Query: 131 MPALVYEPAGYC--TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVF 188
LV E YC + +D L + H +PL +++A T A+ L + ++
Sbjct: 128 TAWLVME---YCLGSASDLL----EVHKKPL---QEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 189 RNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEY---LTTGYYN 245
R+++ NIL E KL DF S SI A+ +G+ + APE + G Y+
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFG-SASI-----MAPANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 246 EKTDVYSFG 254
K DV+S G
Sbjct: 232 GKVDVWSLG 240
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 74 GYILYMGFLRDRGPILVMKYRKSVRYASER---CFNNIVFASQMNHKSILKLIGCCLEAE 130
G + + +R+ + + K S + ++E+ + F ++ H + ++ GC L
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 131 MPALVYEPAGYC--TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVF 188
LV E YC + +D L + H +PL +++A T A+ L + ++
Sbjct: 89 TAWLVME---YCLGSASDLL----EVHKKPL---QEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 189 RNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEY---LTTGYYN 245
R+++ NIL E KL DF S SI A+ +G+ + APE + G Y+
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFG-SASI-----MAPANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 246 EKTDVYSFG 254
K DV+S G
Sbjct: 193 GKVDVWSLG 201
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 180
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGP---LQTHLEP---LLLTH 163
+ + H+ I+K G C+E + +V+E + L R +GP L P L +
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
L +A + A + YL Q V R++ N L E K+ DF +S+ + +
Sbjct: 130 MLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + PE + + ++DV+S G +L + T
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPA-LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
+Q+ H ++++L+G +E + +V E +L D L ++ L L LK +++
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 116
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
A+ YL V R++ N+L E+ AK+ DF L+K + T
Sbjct: 117 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLP 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+++ APE L ++ K+DV+SFG LL
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILL 195
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
L L H + + + A + +L + + R++ NIL E+ K+ DF L++ I +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A L++ APE + Y ++DV+SFG LL + +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 134 LVYEPAGYCT--LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI 191
+ E G C L R+ GP+ P + ++ VA+ A+ YL+ V+ R++
Sbjct: 101 IAMELMGTCAEKLKKRMQGPI-----PERILGKMTVAI--VKALYYLKE--KHGVIHRDV 151
Query: 192 EPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL-----TTGYYNE 246
+P NIL E KL DF +S + + K +++ G + APE + T Y+
Sbjct: 152 KPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPTKPDYDI 208
Query: 247 KTDVYSFGKLLLVLLTGR 264
+ DV+S G L+ L TG+
Sbjct: 209 RADVWSLGISLVELATGQ 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPA-LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
+Q+ H ++++L+G +E + +V E +L D L ++ L L LK +++
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 125
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
A+ YL V R++ N+L E+ AK+ DF L+K + T
Sbjct: 126 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLP 177
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+++ APE L ++ K+DV+SFG LL
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILL 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N + + H +IL +G ++ A+V + +L L+ ++T E + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-IIETKFEMIKL---I 107
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS--KSIPEGKTHIK 223
+A +TA + YL + ++ R+++ NI E+ K+ DF L+ KS G +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 224 ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280
+ GS+ + APE + Y+ ++DVY+FG +L L+TG+ SN
Sbjct: 165 QLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNIN 213
Query: 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340
D++ F+ GY++ D V +C + ++L A +CL ++RP +
Sbjct: 214 NRDQI-IFMVGRGYLSPDLSKV-RSNCPKAMKRLMA------ECLKKKRDERPLFPQILA 265
Query: 341 KLRQMYRT 348
+ + R+
Sbjct: 266 SIELLARS 273
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPA-LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
+Q+ H ++++L+G +E + +V E +L D L ++ L L LK +++
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 110
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
A+ YL V R++ N+L E+ AK+ DF L+K + T
Sbjct: 111 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLP 162
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+++ APE L ++ K+DV+SFG LL
Sbjct: 163 VKWTAPEALREKKFSTKSDVWSFGILL 189
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
VV R+++P N+L AK+ DF LS + +G+ + GS +AAPE ++ Y
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAAPEVISGRLYA 193
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D++S G +L LL G
Sbjct: 194 GPEVDIWSSGVILYALLCG 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-Y 244
VV+R+++P NIL E ++ D L+ + K H ++G+ + APE L G Y
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAY 368
Query: 245 NEKTDVYSFGKLLLVLLTGRT 265
+ D +S G +L LL G +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-Y 244
VV+R+++P NIL E ++ D L+ + K H ++G+ + APE L G Y
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAY 368
Query: 245 NEKTDVYSFGKLLLVLLTGRT 265
+ D +S G +L LL G +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHS 389
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI-PEGKTHIKASTAIGSLEFAAP 236
L F V+ R+I+ NIL + + KL DF I PE K ST +G+ + AP
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWMAP 185
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E +T Y K D++S G + + ++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-Y 244
VV+R+++P NIL E ++ D L+ + K H ++G+ + APE L G Y
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAY 368
Query: 245 NEKTDVYSFGKLLLVLLTGRT 265
+ D +S G +L LL G +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHS 389
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-Y 244
VV+R+++P NIL E ++ D L+ + K H ++G+ + APE L G Y
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAY 367
Query: 245 NEKTDVYSFGKLLLVLLTGRT 265
+ D +S G +L LL G +
Sbjct: 368 DSSADWFSLGCMLFKLLRGHS 388
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ E A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 161
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 161
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 178 LRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA 234
LR+ ++ R+++P N+L + KL DF ++ I G++ + A +G+ F
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFM 200
Query: 235 APEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
APE + Y + DV+ G +L +LL+G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 188
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPA-LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
+Q+ H ++++L+G +E + +V E +L D L ++ L L LK +++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 297
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
A+ YL V R++ N+L E+ AK+ DF L+K + T
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLP 349
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+++ APE L ++ K+DV+SFG LL
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILL 376
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY- 244
VV R+++P N+L AK+ DF LS + +G+ + GS +AAPE ++ Y
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSCGSPNYAAPEVISGRLYA 188
Query: 245 NEKTDVYSFGKLLLVLLTG 263
+ D++S G +L LL G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ F L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT 154
A+E+ +++V +M HK+I+ L+G C + +Y GY + G L+
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD---GPLYVIVGYAS-----KGNLRE 130
Query: 155 HL-------------------EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195
+L E + + + A + YL Q + R++ N
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARN 187
Query: 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
+L E K+ DF L++ I + K + +++ APE L Y ++DV+SFG
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 256 LLLVLLT 262
L+ + T
Sbjct: 248 LMWEIFT 254
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 108 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 161
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 161
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL-YGPLQTHLEPLLLTHRLK 166
I SQ + + K G L+ ++ E G + D L GP +L LK
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK 131
Query: 167 VAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAST 226
+ YL + + R+I+ N+L E+ KL DF ++ + + T IK +T
Sbjct: 132 -------GLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNT 179
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+G+ + APE + Y+ K D++S G + L G
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 161
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 89 LVMKYRKSVRYASER--CFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
+ +K KS +A E+ + + S + H++I+ L+G C P LV YC
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITE--YCCYG 135
Query: 146 DRL-----------YGPLQTHLEPLLLTHRL-KVAMETANAVAYLRFGFPQPVVFRNIEP 193
D L P L T L + + A +A+L + + R++
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAA 192
Query: 194 WNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSF 253
N+L + AK+ DF L++ I +I A +++ APE + Y ++DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 254 GKLLLVLLT 262
G LL + +
Sbjct: 253 GILLWEIFS 261
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP-----------LLLTH 163
+H +I+ L+G C L E A + L D L +P L
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
L A + A + YL + + R++ NIL E Y AK+ DF LS+ + ++K
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVK 197
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + A E L Y +DV+S+G LL +++
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTHIKASTAIG 229
TA V L ++ R+++P N+L + KL DF + E G H TA+G
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH--CDTAVG 237
Query: 230 SLEFAAPEYLTT----GYYNEKTDVYSFGKLLLVLLTGRT 265
+ ++ +PE L + GYY + D +S G L +L G T
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT 277
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ D L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP-----------LLLTH 163
+H +I+ L+G C L E A + L D L +P L
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 164 RLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223
L A + A + YL + + R++ NIL E Y AK+ DF LS+ + ++K
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVK 187
Query: 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + A E L Y +DV+S+G LL +++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 100 ASERCFNNIVFASQM-----NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------ 148
A+E+ +++V +M HK+I+ L+G C + ++ A L + L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 149 -----YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203
Y + E + + + A + YL Q + R++ N+L E
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNV 195
Query: 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
K+ DF L++ I + K + +++ APE L Y ++DV+SFG L+ + T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ D L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + + M H++++ L+ V+ PA + +Y L THL
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLD----------VFTPARSLEEFNDVY--LVTHLMGAD 112
Query: 161 LTHRLKVAMETANAVAYL--------RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
L + +K T + V +L ++ ++ R+++P N+ E+ K+ D L+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ T + + + + + APE L +YN+ D++S G ++ LLTGRT+
Sbjct: 173 R-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 18/114 (15%)
Query: 161 LTHRLK--------VAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDF 209
+ HR+K + + + V YL +V R+++P N+L + ++ K+ DF
Sbjct: 127 IIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDF 183
Query: 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
LS K K +G+ + APE L Y +EK DV+S G +L +LL G
Sbjct: 184 GLSAVFENQK---KMKERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 170 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----AN 223
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
V+ R+++P N+ + KL DF L++ + + A T +G+ + +PE + YN
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYN 194
Query: 246 EKTDVYSFGKLLLVL 260
EK+D++S G LL L
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 114 MNHKSILKLIGCCLEAE-MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
+NH ++L LIG L E +P ++ + L + P + L++ L+VA
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA---- 134
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG-----KTHIKASTA 227
+ YL Q V R++ N + E + K+ DF L++ I + + H A
Sbjct: 135 RGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ ++ A E L T + K+DV+SFG LL LLT
Sbjct: 192 V---KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAI 228
++ + LR+ ++ R+++P NI+ Q + K+ D +K + +G+ + +
Sbjct: 129 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 185
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+L++ APE L Y D +SFG L +TG
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAI 228
++ + LR+ ++ R+++P NI+ Q + K+ D +K + +G+ + +
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 184
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+L++ APE L Y D +SFG L +TG
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 37/244 (15%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL-- 165
I Q+ H++++ L+ C + + LV+E + L D L P L +++
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD-------LELFPNGLDYQVVQ 127
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE-GKTHIKA 224
K + N + F ++ R+I+P NIL + KL DF ++++ G+ +
Sbjct: 128 KYLFQIINGIG---FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--- 181
Query: 225 STAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSN----F 279
+ + + APE L Y + DV++ G L+ + G L G S+ +
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP------LFPGDSDIDQLY 235
Query: 280 FITDRVEKFI-RSNGYMNIDPVIVGDR--------SCFRKEEKL-QAYVELAFKCLSHSA 329
I + I R N +PV G R R+ KL + ++LA KCL
Sbjct: 236 HIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295
Query: 330 EDRP 333
+ RP
Sbjct: 296 DKRP 299
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 30/256 (11%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHR--LKVAMET 171
M H++IL+ IG AE + + A G L L+ +++ +A
Sbjct: 75 MKHENILQFIG----AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETM 130
Query: 172 ANAVAYLRFGFP------QPVV-FRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
A +AYL P +P + R+I+ N+L + A + DF L+ GK+
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 225 STAIGSLEFAAPEYLTTGYYNEKT-----DVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279
+G+ + APE L ++ D+Y+ G L+L L R A G +
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG-LVLWELASRCTA-----ADGPVDE 244
Query: 280 FITDRVEKFIRSNGYMNIDPVIVGD------RSCFRKEEKLQAYVELAFKCLSHSAEDRP 333
++ E+ + ++ V+V R ++K + E +C H AE R
Sbjct: 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304
Query: 334 TMIDVAKKLRQMYRTS 349
+ V +++ QM R +
Sbjct: 305 SAGCVGERITQMQRLT 320
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
V+ R+++P N+ + KL DF L++ + + KA +G+ + +PE + YN
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYN 194
Query: 246 EKTDVYSFGKLLLVL 260
EK+D++S G LL L
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHL---EP------LL 160
+ + H+ I+K G C + + +V+E + L R +GP L +P L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 161 LTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220
L+ L +A + A+ + YL Q V R++ N L K+ DF +S+ +
Sbjct: 132 LSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + + PE + + ++DV+SFG +L + T
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-GPLQTHLEPLLLTHR 164
I SQ + + K G L+ ++ E G + D L GPL T
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-------TQI 106
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ E + YL + + R+I+ N+L E KL DF ++ + + T IK
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKR 161
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T +G+ + APE + Y+ K D++S G + L G
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-GPLQTHLEPLLLTHR 164
I SQ + + K G L+ ++ E G + D L GPL T
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-------TQI 126
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ E + YL + + R+I+ N+L E KL DF ++ + + T IK
Sbjct: 127 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKR 181
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+T +G+ + APE + Y+ K D++S G + L G
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
KV++ + YLR ++ R+++P NIL KL DF +S + + A+
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM----AN 164
Query: 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+G+ + +PE L +Y+ ++D++S G L+ + GR
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-GPLQTHLEPLLLTHR 164
I SQ + I + G L++ ++ E G + D L GPL+ T+
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE-------TYI 118
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ E + YL + + R+I+ N+L E+ KL DF ++ + + T IK
Sbjct: 119 ATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKR 173
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ +G+ + APE + Y+ K D++S G + L G
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 116 HKSILKLIGCCLE--AEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
H++I+K G C E L+ E P+G L L + + L +LK A++
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSG------SLKEYLPKNKNKINLKQQLKYAVQI 123
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ YL G Q V R++ N+L + E+ K+ DF L+K+I K S
Sbjct: 124 CKGMDYL--GSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 232 EFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
F APE L + +DV+SFG L LLT
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+LL + + + A +AY+ + + R++ N+L E K+ DF L++ I E
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI-ED 162
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR----LAT 274
+ A +++ APE + G + K+DV+SFG LL ++T I + R + T
Sbjct: 163 NEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMT 222
Query: 275 GGSNFFITDRVE 286
S + RVE
Sbjct: 223 ALSQGYRMPRVE 234
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 116 HKSILKLIGCCLE--AEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
H++I+K G C E L+ E P+G L L + + L +LK A++
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSG------SLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL 231
+ YL G Q V R++ N+L + E+ K+ DF L+K+I K S
Sbjct: 136 CKGMDYL--GSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 232 EFA-APEYLTTGYYNEKTDVYSFGKLLLVLLT 262
F APE L + +DV+SFG L LLT
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
A E A+A+ YL +V+R+++P NIL + L DF L K E + ST
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTF 199
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+ E+ APE L Y+ D + G +L +L G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI-PEGKTHIKASTAIGSLEFAAP 236
L F V+ R+I+ NIL + + KL DF I PE K S +G+ + AP
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAP 186
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E +T Y K D++S G + + ++ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI-PEGKTHIKASTAIGSLEFAAP 236
L F V+ R+I+ NIL + + KL DF I PE K S +G+ + AP
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSXMVGTPYWMAP 185
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E +T Y K D++S G + + ++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI-PEGKTHIKASTAIGSLEFAAP 236
L F V+ R+I+ NIL + + KL DF I PE K S +G+ + AP
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSEMVGTPYWMAP 185
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E +T Y K D++S G + + ++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AV YL +V R+++P N+L+ E+ + DF LSK G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
STA G+ + APE L Y++ D +S G + +LL G
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 83 RDRGPILVMK-YRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141
R G + +K +KS + N I ++ H++I+ L LV +
Sbjct: 31 RLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSG 90
Query: 142 CTLADRLYGPLQTHLEPLLLTHRLK--VAMETANAVAYLRFGFPQPVVFRNIEPWNILF- 198
L DR+ LE + T + V + +AV YL +V R+++P N+L+
Sbjct: 91 GELFDRI-------LERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYL 140
Query: 199 --QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
+E + DF LSK G STA G+ + APE L Y++ D +S G +
Sbjct: 141 TPEENSKIMITDFGLSKMEQNGIM----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
Query: 257 LLVLLTG 263
+LL G
Sbjct: 197 TYILLCG 203
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYY 244
V R++ NIL + E K+ DF L+K +P K + + + + APE L+ +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 245 NEKTDVYSFGKLLLVLLT 262
+ ++DV+SFG +L L T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYN 245
V R++ NIL + E K+ DF L+K +P K + + + + APE L+ ++
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 246 EKTDVYSFGKLLLVLLT 262
++DV+SFG +L L T
Sbjct: 209 RQSDVWSFGVVLYELFT 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AV YL +V R+++P N+L+ E+ + DF LSK G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
STA G+ + APE L Y++ D +S G + +LL G
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYN 245
V R++ NIL + E K+ DF L+K +P K + + + + APE L+ ++
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 246 EKTDVYSFGKLLLVLLT 262
++DV+SFG +L L T
Sbjct: 196 RQSDVWSFGVVLYELFT 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AV YL +V R+++P N+L+ E+ + DF LSK G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
STA G+ + APE L Y++ D +S G + +LL G
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC-TLAD-RLYGP-LQTHLE 157
++R + ++ M H++++ L+ V+ PA D L P +QT L+
Sbjct: 67 AKRAYRELLLLKHMQHENVIGLLD----------VFTPASSLRNFYDFYLVMPFMQTDLQ 116
Query: 158 PLLLTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
++ LK + E + Y L++ VV R+++P N+ E+ K+ DF L+
Sbjct: 117 KIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 213 KSIPEGKTHIKASTA--IGSLEFAAPEY-LTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ H A + + + APE L+ +YN+ D++S G ++ +LTG+T+
Sbjct: 174 R-------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AV YL +V R+++P N+L+ E+ + DF LSK G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
STA G+ + APE L Y++ D +S G + +LL G
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 23/185 (12%)
Query: 95 KSVRYASERCFNNIV----FASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD---- 146
K+++ ASE + + + H+ I++ G C E +V+E Y D
Sbjct: 77 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE---YMRHGDLNRF 133
Query: 147 -RLYGPLQTHLE--------PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197
R +GP L PL L L VA + A + YL G V R++ N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GL--HFVHRDLATRNCL 190
Query: 198 FQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ K+ DF +S+ I + + + + PE + + ++DV+SFG +L
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 258 LVLLT 262
+ T
Sbjct: 251 WEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RLYGPLQTHLE--------PLLL 161
+ + H+ I++ G C E +V+E + L R +GP L PL L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
L VA + A + YL G V R++ N L + K+ DF +S+ I +
Sbjct: 135 GQLLAVASQVAAGMVYLA-GL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + + PE + + ++DV+SFG +L + T
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---- 157
E+ + V ++H I+KLIG ++ E + + YG L +LE
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIG---------IIEEEPTWIIMELYPYGELGHYLERNKN 104
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
L + + +++ A+AYL V R+I NIL KL DF LS+ I E
Sbjct: 105 SLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-E 160
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + KAS +++ +PE + + +DV+ F + +L+
Sbjct: 161 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---- 157
E+ + V ++H I+KLIG ++ E + + YG L +LE
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIG---------IIEEEPTWIIMELYPYGELGHYLERNKN 108
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
L + + +++ A+AYL V R+I NIL KL DF LS+ I E
Sbjct: 109 SLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-E 164
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + KAS +++ +PE + + +DV+ F + +L+
Sbjct: 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---- 157
E+ + V ++H I+KLIG ++ E + + YG L +LE
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIG---------IIEEEPTWIIMELYPYGELGHYLERNKN 120
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
L + + +++ A+AYL V R+I NIL KL DF LS+ I E
Sbjct: 121 SLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-E 176
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + KAS +++ +PE + + +DV+ F + +L+
Sbjct: 177 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 17/182 (9%)
Query: 95 KSVRYASERCFNNIV----FASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD--RL 148
K+++ ASE + + + H+ I++ G C E +V+E + L R
Sbjct: 48 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 107
Query: 149 YGPLQTHLE--------PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200
+GP L PL L L VA + A + YL G V R++ N L +
Sbjct: 108 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GL--HFVHRDLATRNCLVGQ 164
Query: 201 EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVL 260
K+ DF +S+ I + + + + PE + + ++DV+SFG +L +
Sbjct: 165 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
Query: 261 LT 262
T
Sbjct: 225 FT 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T T G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGT 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
V+ R+++P N+ + KL DF L++ + + A +G+ + +PE + YN
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF--AKEFVGTPYYMSPEQMNRMSYN 194
Query: 246 EKTDVYSFGKLLLVL 260
EK+D++S G LL L
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK-THIKASTAIGSLEFAAPEYLTTGYYN 245
V R++ NIL + E K+ DF L+K +P K + + + APE L+ ++
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFS 192
Query: 246 EKTDVYSFGKLLLVLLT 262
++DV+SFG +L L T
Sbjct: 193 RQSDVWSFGVVLYELFT 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T T G+
Sbjct: 115 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGT 171
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T T G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGT 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 159 LLLTHRLKVAMETANAVAYL-RFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
L L + + +A + A +AY+ R + + R++ NIL K+ DF L++ I +
Sbjct: 102 LKLPNLVDMAAQVAAGMAYIERMNY----IHRDLRSANILVGNGLICKIADFGLARLIED 157
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277
+ + +++ APE G + K+DV+SFG LL L+T + + G +
Sbjct: 158 NEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY-----PGMN 211
Query: 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334
N + ++VE+ GY P + C + EL C E+RPT
Sbjct: 212 NREVLEQVER-----GYRMPCP-----QDC------PISLHELMIHCWKKDPEERPT 252
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
K+ + T A+ +L+ ++ R+I+P NIL KL DF +S + + I +
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKT 183
Query: 226 TAIGSLEFAAPEYLTTGY----YNEKTDVYSFGKLLLVLLTGR 264
G + APE + Y+ ++DV+S G L L TGR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 24/272 (8%)
Query: 6 RKFKKSSSDRKEEETVCTTTLRNGQIFLEKLIASFDGKR-NPIRSFSSEDLKTAINNYSM 64
R F + + +EE T T+ +G ++ A D + +P + +E+++ ++
Sbjct: 86 RTFHVETPEEREEWTTAIQTVADG--LKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKH 143
Query: 65 RNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIG 124
R +T++E E Y+ +G G ++++K + + RY + + V ++ L
Sbjct: 144 R-VTMNEFE-YLKLLG-KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 125 CCLEAEMPALVYEPAGYCTLADRL--------YGPLQTHL--EPLLLTHRLKV-AMETAN 173
+ P L + T DRL G L HL E + R + E +
Sbjct: 201 VLQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 259
Query: 174 AVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLE 232
A+ YL + VV+R+++ N++ ++ K+ DF L K I +G T T G+ E
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPE 314
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ APE L Y D + G ++ ++ GR
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF-SLSKSIPEGKTHIKASTAIG 229
TA V L + R+++P N+L + KL DF + K EG ++ TA+G
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 236
Query: 230 SLEFAAPEYLTT----GYYNEKTDVYSFGKLLLVLLTGRT 265
+ ++ +PE L + GYY + D +S G L +L G T
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF-SLSKSIPEGKTHIKASTAIG 229
TA V L + R+++P N+L + KL DF + K EG ++ TA+G
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 236
Query: 230 SLEFAAPEYLTT----GYYNEKTDVYSFGKLLLVLLTGRT 265
+ ++ +PE L + GYY + D +S G L +L G T
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF-SLSKSIPEGKTHIKASTAIG 229
TA V L + R+++P N+L + KL DF + K EG ++ TA+G
Sbjct: 174 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 231
Query: 230 SLEFAAPEYLTT----GYYNEKTDVYSFGKLLLVLLTGRT 265
+ ++ +PE L + GYY + D +S G L +L G T
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 150 GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209
G L H++ + A ++ L F + +++R+++ N+L E KL DF
Sbjct: 109 GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF 168
Query: 210 SLSKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
+ K EG + + +T G+ ++ APE L Y D ++ G LL +L G
Sbjct: 169 GMCK---EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-GPLQTHLEPLLLTHR 164
I SQ + + K G L+ ++ E G + D L GPL T
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-------TQI 106
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ E + YL + + R+I+ N+L E KL DF ++ + + T IK
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKR 161
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ +G+ + APE + Y+ K D++S G + L G
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 29/190 (15%)
Query: 80 GFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139
G ++ RGPI E+ + I +++H +++KL+ + L
Sbjct: 72 GCIQPRGPI-------------EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL----- 113
Query: 140 GYCTLADRLYGPLQ--THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197
Y GP+ L+PL + + YL + Q ++ R+I+P N+L
Sbjct: 114 -YMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLL 169
Query: 198 FQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG---YYNEKTDVYSFG 254
E+ K+ DF +S +G + ++T +G+ F APE L+ + + DV++ G
Sbjct: 170 VGEDGHIKIADFGVSNEF-KGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMG 227
Query: 255 KLLLVLLTGR 264
L + G+
Sbjct: 228 VTLYCFVFGQ 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 22/271 (8%)
Query: 6 RKFKKSSSDRKEEETVCTTTLRNGQIFLEKLIASFDGKRNPIRSFSSEDLKTAINNYSMR 65
R F + + +EE T T+ +G E+ F +P + +E+++ ++ R
Sbjct: 89 RTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDFRSG-SPSDNSGAEEMEVSLAKPKHR 147
Query: 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGC 125
+T++E E Y+ +G G ++++K + + RY + + V ++ L
Sbjct: 148 -VTMNEFE-YLKLLG-KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 126 CLEAEMPALVYEPAGYCTLADRL--------YGPLQTHL--EPLLLTHRLKV-AMETANA 174
+ P L + T DRL G L HL E + R + E +A
Sbjct: 205 LQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 263
Query: 175 VAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEF 233
+ YL + VV+R+++ N++ ++ K+ DF L K I +G T T G+ E+
Sbjct: 264 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPEY 318
Query: 234 AAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
APE L Y D + G ++ ++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 184 QPVVFRNIEPWNILFQEEY----AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL 239
Q VV R+++P NIL+ +E + ++ DF +K + + T + F APE L
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM--TPCYTANFVAPEVL 192
Query: 240 TTGYYNEKTDVYSFGKLLLVLLTGRT 265
Y+ D++S G LL +LTG T
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYT 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 184 QPVVFRNIEPWNILFQEEYAA----KLFDFSLSKSI--PEGKTHIKASTAIGSLEFAAPE 237
Q VV R+++P NIL+ +E ++ DF +K + G TA F APE
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA----NFVAPE 195
Query: 238 YLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
L Y+E D++S G LL +L G T
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNE 246
+ R++ NIL K+ DF L++ I E + A +++ APE + G +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 247 KTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRS 306
K+DV+SFG LL+ ++T I + G SN + +E+ R
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPY-----PGMSNPEVIRALERGYRMP-------------- 232
Query: 307 CFRKEEKLQAYVELAFKCLSHSAEDRPT 334
R E + + +C + E+RPT
Sbjct: 233 --RPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 24 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE-------------TEIEILKK 70
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 71 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 118
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 119 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 172
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 173 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 232
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 233 SGKYNFIPE 241
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 184 QPVVFRNIEPWNILFQEEYAA----KLFDFSLSKSI--PEGKTHIKASTAIGSLEFAAPE 237
Q VV R+++P NIL+ +E ++ DF +K + G TA F APE
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA----NFVAPE 195
Query: 238 YLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
L Y+E D++S G LL +L G T
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 187 VFRNIEPWNILFQEEYAA--KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL---TT 241
V +++P NI+F + + KL DF L+ + + K +K +T G+ EFAAPE
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTT--GTAEFAAPEVAEGKPV 227
Query: 242 GYYNEKTDVYSFGKLLLVLLTG 263
GYY TD++S G L +LL+G
Sbjct: 228 GYY---TDMWSVGVLSYILLSG 246
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNE 246
+ R+I+ N+L E KL DF ++ + + T IK + +G+ + APE + Y+
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 247 KTDVYSFGKLLLVLLTGR 264
K D++S G + L G
Sbjct: 199 KADIWSLGITAIELARGE 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE-------------TEIEILKK 71
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 119
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 120 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 173
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 234 SGKYNFIPE 242
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE-------------TEIEILKK 71
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 119
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 120 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 173
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 234 SGKYNFIPE 242
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 187 VFRNIEPWNILFQEEYAA--KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL---TT 241
V +++P NI+F + + KL DF L+ + + K +K +T G+ EFAAPE
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTT--GTAEFAAPEVAEGKPV 333
Query: 242 GYYNEKTDVYSFGKLLLVLLTG 263
GYY TD++S G L +LL+G
Sbjct: 334 GYY---TDMWSVGVLSYILLSG 352
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 100 ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL-YGPLQTHLEP 158
A C I Q+NH +++K +E +V E A L+ + + Q L P
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ V + +A L + V+ R+I+P N+ KL D L +
Sbjct: 135 ERTVWKYFVQLCSA-----LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T A + +G+ + +PE + YN K+D++S G LL
Sbjct: 190 TT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE-------------TEIEILKK 71
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 119
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 120 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 173
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 234 SGKYNFIPE 242
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+LL + + + A +AY+ + + R++ N+L E K+ DF L++ I E
Sbjct: 106 VLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI-ED 161
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271
+ A +++ APE + G + K++V+SFG LL ++T I + R
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIG 229
E A+A+ Y + V+ R+I+P N+L + K+ DF S P ++ T G
Sbjct: 131 ELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCG 183
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+L++ PE + +NEK D++ G L LL G
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 21 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 74
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 125
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS----LSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 126 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 179
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 20/167 (11%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L+
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD------------YLV 106
Query: 162 TH-RLKVAMETA---NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
H R+K A V+ +++ + +V R+++ N+L + K+ DF S
Sbjct: 107 AHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV 166
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
G K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 167 GN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNE 246
+ R++ NIL K+ DF L++ I E + A +++ APE + G +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 247 KTDVYSFGKLLLVLLT 262
K+DV+SFG LL+ ++T
Sbjct: 365 KSDVWSFGILLMEIVT 380
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 26 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 79
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 130
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF----SLSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 131 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 184
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 17 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 70
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 121
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF----SLSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 122 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 175
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 28 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 81
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 132
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF----SLSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 133 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 186
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 186 VVFRNIEPWNILFQE---EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P N+L + + K+ DF LS G K +G+ + APE L
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLRKK 181
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y +EK DV+S G +L +LL G
Sbjct: 182 Y-DEKCDVWSCGVILYILLCG 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 107
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 31 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE-------------TEIEILKK 77
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 78 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 125
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 126 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 179
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 240 SGKYNFIPE 248
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 186 VVFRNIEPWNILFQE---EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P N+L + + K+ DF LS G K +G+ + APE L
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLRKK 198
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y +EK DV+S G +L +LL G
Sbjct: 199 Y-DEKCDVWSCGVILYILLCG 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL--YGPLQTHLEPL 159
++ F + +NH +I+KL + LV E A + D L +G ++
Sbjct: 51 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK---- 106
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
R K + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 107 --EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 160
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 161 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 54 ICINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 105
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 106 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 81/209 (38%), Gaps = 40/209 (19%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP--- 97
Query: 162 THRLKVAMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
+ M +A V YL G + R+I+P N+L E K+ DF
Sbjct: 98 ----DIGMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFG 149
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTGRTIGHL 269
L+ + G+L + APE L ++ E DV+S G ++LT G L
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG----IVLTAMLAGEL 205
Query: 270 SRLATGGSNFFITDRVEKFIRSNGYMNID 298
S +D EK N + ID
Sbjct: 206 PWDQPSDSXQEYSDWKEKKTYLNPWKKID 234
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 101
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 101
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 36/174 (20%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP--- 97
Query: 162 THRLKVAMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
+ M +A V YL G + R+I+P N+L E K+ DF
Sbjct: 98 ----DIGMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFG 149
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
L+ + G+L + APE L ++ E DV+S G +L +L G
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 107 NIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG-------YCTLADRLYGPLQTHLEPL 159
I S++ H +I+K++ LV E G + RL PL ++
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY---- 134
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
+ + +AV YLR + ++ R+I+ NI+ E++ KL DF + + GK
Sbjct: 135 -------IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184
Query: 220 THIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLL 261
T G++E+ APE L Y + +++S G L L+
Sbjct: 185 LFY---TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 101
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQE---EYAAKLFDFSLSKSIPEGKTHIKASTAIG 229
NA+AY Q VV ++++P NILFQ+ K+ DF L++ K+ ++ A G
Sbjct: 135 NALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAG 188
Query: 230 SLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ + APE K D++S G ++ LLTG
Sbjct: 189 TALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 174 AVAYLRFGFPQPVVFRNIEPWNILFQ---EEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
AVAYL +V R+++P N+L+ + K+ DF LSK + + + T G+
Sbjct: 160 AVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGT 213
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+ APE L Y + D++S G + +LL G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 100
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 101
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 148 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 201
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 252
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF----SLSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 306
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E I +NH++++K G E + L E YC+ G L +EP
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP--- 98
Query: 162 THRLKVAMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
+ M +A V YL G + R+I+P N+L E K+ DF
Sbjct: 99 ----DIGMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFG 150
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
L+ + G+L + APE L ++ E DV+S G +L +L G
Sbjct: 151 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 101
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 37/195 (18%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I ++NH I+K I +AE +V E L D++ G RLK
Sbjct: 205 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKE 252
Query: 168 AM------ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEG 218
A + AV YL ++ R+++P N+L +E+ K+ DF SK + G
Sbjct: 253 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 307
Query: 219 KTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGH 268
+T + T G+ + APE L T YN D +S G +L + L+G RT
Sbjct: 308 ETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 366
Query: 269 LSRLATGGSNFFITD 283
L T G FI +
Sbjct: 367 LKDQITSGKYNFIPE 381
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 100
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 50/249 (20%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQ 113
++K A + + + I I +G R+ P L ++ I +
Sbjct: 150 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE-------------TEIEILKK 196
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAM---- 169
+NH I+K I +AE +V E L D++ G RLK A
Sbjct: 197 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVG-----------NKRLKEATCKLY 244
Query: 170 --ETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKA 224
+ AV YL ++ R+++P N+L +E+ K+ DF SK + G+T +
Sbjct: 245 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-M 298
Query: 225 STAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG-------RTIGHLSRLAT 274
T G+ + APE L T YN D +S G +L + L+G RT L T
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358
Query: 275 GGSNFFITD 283
G FI +
Sbjct: 359 SGKYNFIPE 367
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E I +NH++++K G E + L E YC+ G L +EP
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP--- 97
Query: 162 THRLKVAMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
+ M +A V YL G + R+I+P N+L E K+ DF
Sbjct: 98 ----DIGMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFG 149
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
L+ + G+L + APE L ++ E DV+S G +L +L G
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMK---YRKSVRYASERCFNNIVF 110
D ++ ++N+ I I E I+ + +R G ++ +K RK R E FN +V
Sbjct: 71 DPRSYLDNF----IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVI 124
Query: 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAME 170
H++++++ L + +V E L D + TH + ++A
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-----IVTHTR----MNEEQIAAV 175
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS----LSKSIPEGKTHIKAST 226
+ L Q V+ R+I+ +IL + KL DF +SK +P K
Sbjct: 176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------ 229
Query: 227 AIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 100
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIG 100
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+A + + + R+I+P N+L E K+ DF L+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 222 IKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA--IGSLEFAAPEY-LTTG 242
VV R+++P N+ E+ K+ DF L++ H A + + + APE L+
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWM 217
Query: 243 YYNEKTDVYSFGKLLLVLLTGRTI 266
+YN+ D++S G ++ +LTG+T+
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTL 241
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL------------YGPLQTHLE-- 157
++ ++ +I+KL+G C + L++E Y L + L + L T
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 158 -----PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212
PL +L +A + A +AYL + V R++ N L E K+ DF LS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++I + + + PE + Y ++DV+++G +L + +
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 31/168 (18%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP-------DI 99
Query: 168 AMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216
M +A V YL G + R+I+P N+L E K+ DF L+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFR 155
Query: 217 EGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ G+L + APE L ++ E DV+S G +L +L G
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 106
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 184 QPVVFRNIEPWNILFQEEY----AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL 239
Q VV R+++P NIL+ +E + ++ DF +K + + T + F APE L
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--XTPCYTANFVAPEVL 192
Query: 240 TTGYYNEKTDVYSFGKLLLVLLTGRT 265
Y+ D++S G LL LTG T
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTGYT 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + +++R+++P N+L ++ ++ D L+ + G+T K G+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GT 352
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
F APE L Y+ D ++ G L ++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 106
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 36/174 (20%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
E C N + +NH++++K G E + L E YC+ G L +EP
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEP--- 97
Query: 162 THRLKVAMETANA----------VAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210
+ M +A V YL G + R+I+P N+L E K+ DF
Sbjct: 98 ----DIGMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFG 149
Query: 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
L+ + G+L + APE L ++ E DV+S G +L +L G
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 107
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167
I +NH++++K G E + L E YC+ G L +EP +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLE---YCS-----GGELFDRIEPDIGMPEPDA 106
Query: 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA 227
+A + + + R+I+P N+L E K+ DF L+ +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 228 IGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
G+L + APE L ++ E DV+S G +L +L G
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 27/180 (15%)
Query: 91 MKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYG 150
M RK R E FN +V +H +++ + L + +V E L D
Sbjct: 78 MDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD---- 131
Query: 151 PLQTHL---EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207
+ TH E + T V + A++YL Q V+ R+I+ +IL + KL
Sbjct: 132 -IVTHTRMNEEQIAT----VCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLS 183
Query: 208 DFS----LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
DF +SK +P K +G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 184 DFGFCAQVSKEVP------KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + +++R+++P N+L ++ ++ D L+ + G+T K G+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GT 352
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
F APE L Y+ D ++ G L ++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 21/178 (11%)
Query: 90 VMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY 149
+M RK R E FN +V H +++++ L E L + L
Sbjct: 77 MMDLRKQQR--RELLFNEVVIMRDYQHFNVVEMYKSYLVGE---------ELWVLMEFLQ 125
Query: 150 GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209
G T + + + ++A + L + Q V+ R+I+ +IL + KL DF
Sbjct: 126 GGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDF 185
Query: 210 ----SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
+SK +P K +G+ + APE ++ Y + D++S G +++ ++ G
Sbjct: 186 GFCAQISKDVP------KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + +++R+++P N+L ++ ++ D L+ + G+T K G+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GT 352
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
F APE L Y+ D ++ G L ++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 171 TANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
TA V+ L + +++R+++P N+L ++ ++ D L+ + G+T K G+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GT 352
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
F APE L Y+ D ++ G L ++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + T G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 164 ATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGT 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T G+
Sbjct: 117 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGT 173
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + T G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 164 ATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGT 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 108 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + T G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 168 ATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK----- 219
L + ++ A AV +L + ++ R+++P NI F + K+ DF L ++ + +
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 220 -----THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLL 261
+ + + +G+ + +PE + Y+ K D++S G +L LL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGS 230
A V+ L + + VV+R+I+ N++ ++ K+ DF L K I +G T G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGT 168
Query: 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
E+ APE L Y D + G ++ ++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 178 LRFGFPQPVVFRNIEPWNILF-QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAP 236
LR+ ++ R+++P +L +E +A + +I G++ + A +G+ F AP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTG 263
E + Y + DV+ G +L +LL+G
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG--Y 243
+++R+I+ NIL L DF LSK +T +A G++E+ AP+ + G
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSG 238
Query: 244 YNEKTDVYSFGKLLLVLLTG 263
+++ D +S G L+ LLTG
Sbjct: 239 HDKAVDWWSLGVLMYELLTG 258
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 178 LRFGFPQPVVFRNIEPWNILF-QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAP 236
LR+ ++ R+++P +L +E +A + +I G++ + A +G+ F AP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 237 EYLTTGYYNEKTDVYSFGKLLLVLLTG 263
E + Y + DV+ G +L +LL+G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201
C+L DR +G L + ++ A AV +L + ++ R+++P NI F +
Sbjct: 156 CSLEDREHGVC------------LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMD 200
Query: 202 YAAKLFDFSLSKSIPEGKTHIKASTA----------IGSLEFAAPEYLTTGYYNEKTDVY 251
K+ DF L ++ + + T +G+ + +PE + Y+ K D++
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 252 SFGKLLLVLL 261
S G +L LL
Sbjct: 261 SLGLILFELL 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL--YGPLQTHLEPL 159
++ F + +NH +I+KL + L+ E A + D L +G ++
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---- 111
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
+ + V+ +++ + +V R+++ N+L + K+ DF S G
Sbjct: 112 ------EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 165
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K T GS +AAPE Y+ + DV+S G +L L++G
Sbjct: 166 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
++ R+++P N+ E+ ++ DF L++ E T A+ + APE L +Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW-----YRAPEIMLNWMHY 206
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
N+ D++S G ++ LL G+ +
Sbjct: 207 NQTVDIWSVGCIMAELLQGKAL 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT----- 241
V R+I+P NIL +L DF + E T +++S A+G+ ++ +PE L
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGK 255
Query: 242 GYYNEKTDVYSFGKLLLVLLTGRT 265
G Y + D +S G + +L G T
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGET 279
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ +M+ R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 80 PVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 138
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 139 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 191
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 148 LYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207
L G L+ HL+ + V + V L + Q ++ R+++P NIL E +
Sbjct: 98 LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT 157
Query: 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT---GYYNEKTDVYSFGKLLLVLLTGR 264
DF+++ +P +T I +T G+ + APE ++ Y+ D +S G LL GR
Sbjct: 158 DFNIAAMLPR-ETQI--TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 265 TIGHL 269
H+
Sbjct: 215 RPYHI 219
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 77 LYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136
+Y ++ G I+ +K + V + I Q + ++K G + +V
Sbjct: 45 VYKAIHKETGQIVAIK-QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103
Query: 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
E G +++D + +T E + T + T + YL F + R+I+ NI
Sbjct: 104 EYCGAGSVSDIIRLRNKTLTEDEIAT----ILQSTLKGLEYLHF---MRKIHRDIKAGNI 156
Query: 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKL 256
L E AKL DF ++ + + K + IG+ + APE + YN D++S G
Sbjct: 157 LLNTEGHAKLADFGVAGQLTDXMA--KRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGIT 214
Query: 257 LLVLLTGR 264
+ + G+
Sbjct: 215 AIEMAEGK 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
++ R+++P N+ E+ ++ DF L++ E T A+ + APE L +Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW-----YRAPEIMLNWMHY 206
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
N+ D++S G ++ LL G+ +
Sbjct: 207 NQTVDIWSVGCIMAELLQGKAL 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-- 243
+V R+++P NIL ++ KL DF S + G+ K + G+ + APE +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVCGTPSYLAPEIIECSMND 201
Query: 244 ----YNEKTDVYSFGKLLLVLLTG 263
Y ++ D++S G ++ LL G
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 189 RNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKT 248
R+++P NIL + A L DF ++ + + K +T +G+L + APE + + +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT-VGTLYYXAPERFSESHATYRA 216
Query: 249 DVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279
D+Y+ +L LTG +L+ G++
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHI 247
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
++ R+++P N+ E+ ++ DF L++ E T A+ + APE L +Y
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRW-----YRAPEIMLNWMHY 198
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
N+ D++S G ++ LL G+ +
Sbjct: 199 NQTVDIWSVGCIMAELLQGKAL 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----TLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 104 CFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTH 163
I ++NH +I+KL+ LV+E ++ L+T ++ LT
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALT- 97
Query: 164 RLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + + + L F V+ R+++P N+L E A KL DF L+++ G
Sbjct: 98 --GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--G 153
Query: 219 KTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ + +L + APE L YY+ D++S G + ++T R +
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I S + H +IL++ + + L+ E P G LY LQ H R
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG------ELYKELQKHGR--FDEQRS 117
Query: 166 KVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
ME A+A+ Y + V+ R+I+P N+L + K+ DF S P ++
Sbjct: 118 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 170
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+L++ PE + ++EK D++ G L L G
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T T G+ E+ APE + + YN
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----TLCGTPEYLAPEIILSKGYN 202
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 203 KAVDWWALGVLIYEMAAG 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF L+K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I S + H +IL++ + + L+ E P G LY LQ H R
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG------ELYKELQKHGR--FDEQRS 116
Query: 166 KVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
ME A+A+ Y + V+ R+I+P N+L + K+ DF S P ++
Sbjct: 117 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 169
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+L++ PE + ++EK D++ G L L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 101 SERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTH-LEP 158
++R F I+ ++++ H++I+ L+ L A+ VY Y + L+ ++ + LEP
Sbjct: 52 AQRTFREIMILTELSGHENIVNLLNV-LRADNDRDVYLVFDY--METDLHAVIRANILEP 108
Query: 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK----- 213
+ H+ V + + YL G ++ R+++P NIL E K+ DF LS+
Sbjct: 109 V---HKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162
Query: 214 ---------SIPEGKTHIKASTAI-----GSLEFAAPEYLT-TGYYNEKTDVYSFGKLLL 258
SI E + I + + APE L + Y + D++S G +L
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222
Query: 259 VLLTGRTI 266
+L G+ I
Sbjct: 223 EILCGKPI 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I S + H +IL++ + + L+ E P G LY LQ H R
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG------ELYKELQKHGR--FDEQRS 116
Query: 166 KVAMET-ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
ME A+A+ Y + V+ R+I+P N+L + K+ DF S P ++
Sbjct: 117 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRR 169
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
G+L++ PE + ++EK D++ G L L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 146 DRLY--------GPLQTHLEPL---LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPW 194
DRLY G L H++ + H + A E A + +L+ + +++R+++
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLD 150
Query: 195 NILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSF 253
N++ E K+ DF + K +I +G T G+ ++ APE + Y + D ++F
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVT---TKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 254 GKLLLVLLTGRT 265
G LL +L G+
Sbjct: 208 GVLLYEMLAGQA 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 146 DRLY--------GPLQTHLEPL---LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPW 194
DRLY G L H++ + H + A E A + +L+ + +++R+++
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLD 471
Query: 195 NILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSF 253
N++ E K+ DF + K +I +G T G+ ++ APE + Y + D ++F
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVT---TKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 254 GKLLLVLLTGRT 265
G LL +L G+
Sbjct: 529 GVLLYEMLAGQA 540
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGK-----THIKA 224
+ A L F + + R+++P NIL + K+ DF L + T +
Sbjct: 119 DVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 225 STAIGSLEFAAPEYL-----TTGYYNEKTDVYSFGKLLLVLLTGRT--IGH 268
+T GS E+ APE + +Y+++ D++S G +L ++L+G +GH
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K G+ +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T+ + + + + APE + Y
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 246 EKTDVYSFGKLLLVLLTGRTI 266
E D++S G ++ L+ G I
Sbjct: 202 ENVDIWSVGCIMGELVKGSVI 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 162 ATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 198
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 199 KYDKSCDMWSLGVIMYILLCG 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 199
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 200 KYDKSCDMWSLGVIMYILLCG 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
VV RN++P N+L + A KL DF L+ + EG+ A G+ + +PE L
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFA-GTPGYLSPEVLRKD 188
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 189 PYGKPVDLWACGVILYILLVG 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + + +L + APE
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 200
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 201 KYDKSCDMWSLGVIMYILLCG 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 195 KYDKSCDMWSLGVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 245 KYDKSCDMWSLGVIMYILLCG 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
++ F + +NH +I+KL + LV E A + D L + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
R + +AV Y F +V R+++ N+L + K+ DF S G
Sbjct: 118 KFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-- 167
Query: 222 IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K G+ +AAPE Y+ + DV+S G +L L++G
Sbjct: 168 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 239 KYDKSCDMWSLGVIMYILLCG 259
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 193 KYDKSCDMWSLGVIMYILLCG 213
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 186 STAVDIWSLGCIFAEMVTRRAL 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-- 243
+V R+++P NIL ++ KL DF S + G+ K G+ + APE +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMND 201
Query: 244 ----YNEKTDVYSFGKLLLVLLTG 263
Y ++ D++S G ++ LL G
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRAL 203
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 195 KYDKSCDMWSLGVIMYILLCG 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 126 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 186 ATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 194 KYDKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 208
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 209 KYDKSCDMWSLGVIMYILLCG 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 9/163 (5%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLL 161
+R N + Q+ H SIL+L ++ LV E C + + L+ ++P
Sbjct: 56 QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE---MCHNGE-MNRYLKNRVKPFSE 111
Query: 162 THRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221
+ + YL ++ R++ N+L K+ DF L+ + H
Sbjct: 112 NEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--MPH 166
Query: 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
K T G+ + +PE T + ++DV+S G + LL GR
Sbjct: 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + + +L + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 173
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + + +L + APE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 174
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T A G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLA----GTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRAL 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 189 STAVDIWSLGCIFAEMVTRRAL 210
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRAL 202
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + + +L + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 172
Query: 238 YLT-TGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-- 243
+V R+++P NIL ++ KL DF S + G+ K G+ + APE +
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMND 188
Query: 244 ----YNEKTDVYSFGKLLLVLLTG 263
Y ++ D++S G ++ LL G
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRAL 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + + +L + APE L YY
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 189 STAVDIWSLGCIFAEMVTRRAL 210
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP-EGKTHIKASTAI 228
+T V YL V+ R+++ N+ ++ K+ DF L+ I +G+ + T
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLC 203
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ + APE L ++ + D++S G +L LL G+
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 159 LLLTHRLKVAMETANAVAYLR-------FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
LL H+ + A+ A YLR + V+ R+++ N+ E+ K+ DF L
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 212 SKSIP-EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
+ + +G+ + G+ + APE L+ ++ + DV+S G ++ LL G+
Sbjct: 188 ATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G T T G+ E+ APE + + YN
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATW----TLCGTPEYLAPEIILSKGYN 237
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 104 CFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTH 163
I ++NH +I+KL+ LV+E L+ L+T ++ LT
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFE---------FLHQDLKTFMDASALT- 101
Query: 164 RLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + + + L F V+ R+++P N+L E A KL DF L+++ G
Sbjct: 102 --GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--G 157
Query: 219 KTHIKASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ +L + APE L YY+ D++S G + ++T R +
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L E+ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 203
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 204 KAVDWWALGVLIYEMAAG 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 104 CFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE-PLLLT 162
I ++NH +I+KL+ LV+E + L D + T + PL+ +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFE-FLHQDLKDFMDASALTGIPLPLIKS 107
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
+ ++ + L F V+ R+++P N+L E A KL DF L+++ G
Sbjct: 108 YLFQL-------LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVR 158
Query: 223 KASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ +L + APE L YY+ D++S G + ++T R +
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 178 LRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA 234
++F + R+++P N+L+ +++ KL DF +K + T +
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY----YV 177
Query: 235 APEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
APE L Y++ D++S G ++ +LL G
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ ++ DF L+K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 104 CFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE-PLLLT 162
I ++NH +I+KL+ LV+E L D + T + PL+ +
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKS 109
Query: 163 HRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222
+ ++ + L F V+ R+++P N+L E A KL DF L+++ G
Sbjct: 110 YLFQL-------LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVR 160
Query: 223 KASTAIGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ +L + APE L YY+ D++S G + ++T R +
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRAL 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRAL 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 184 QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT--T 241
+ + R+++P NIL + KL DF S+ + + K IK S G+ EF PE+ + +
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK--IKGSR--GTYEFMPPEFFSNES 226
Query: 242 GYYNEKTDVYSFGKLLLVLL 261
Y K D++S G L V+
Sbjct: 227 SYNGAKVDIWSLGICLYVMF 246
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRAL 205
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 178 LRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA 234
++F + R+++P N+L+ +++ KL DF +K + T +
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY----YV 196
Query: 235 APEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
APE L Y++ D++S G ++ +LL G
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRAL 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRAL 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 238 YLT-TGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 186 STAVDIWSLGCIFAEMVTRRAL 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRAL 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRAL 205
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 172
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 106 NNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRL 165
N I +Q++H ++ L + L+ E L DR+ E ++ + +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY-M 155
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA--KLFDFSLSKSIPEGKTHIK 223
+ A E L+ +V +I+P NI+ + + A+ K+ DF L+ + + +K
Sbjct: 156 RQACEG------LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VK 208
Query: 224 ASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTG 263
+TA + EFAAPE + G+Y TD+++ G L VLL+G
Sbjct: 209 VTTA--TAEFAAPEIVDREPVGFY---TDMWAIGVLGYVLLSG 246
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ K+ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYL------ 239
+V R+++P NIL + +L DF S + G+ K G+ + APE L
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDE 277
Query: 240 TTGYYNEKTDVYSFGKLLLVLLTG 263
T Y ++ D+++ G +L LL G
Sbjct: 278 THPGYGKEVDLWACGVILFTLLAG 301
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AVAY V R+++P N LF + KL DF L+ GK
Sbjct: 110 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-- 164
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
T +G+ + +P+ L G Y + D +S G ++ VLL G
Sbjct: 165 -MRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-------GPLQTHLEPLLLTHRL-- 165
NH +I+ L+G C ++ E YC D L + + P ++
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITE---YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 166 -------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + A +A+L + + R++ NIL K+ DF L++ I
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE + Y ++DV+S+G L L +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILF---QEEYAAKLFDFSLSKSIPEGKTHI 222
++ + +AVAY V R+++P N LF + KL DF L+ GK
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-- 181
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
T +G+ + +P+ L G Y + D +S G ++ VLL G
Sbjct: 182 -MRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 106
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 107 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKT-HIKASTAIGSLEFAAPEYLTT 241
+V RN++P N+L + A KL DF L+ + + + H A G+ + +PE L
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA----GTPGYLSPEVLKK 204
Query: 242 GYYNEKTDVYSFGKLLLVLLTG 263
Y++ D+++ G +L +LL G
Sbjct: 205 DPYSKPVDIWACGVILYILLVG 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 47 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGXLL 105
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 106 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 158
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYQMAAG 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAI 228
E +A+ YL + VV+R+++ N++ ++ K+ DF L K I +G T
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFC 170
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ E+ APE L Y D + G ++ ++ GR
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 111
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 112 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 107
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 108 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 47 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 105
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 106 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 158
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-------GPLQTHLEPLLLTHRL-- 165
NH +I+ L+G C ++ E YC D L + + P ++
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITE---YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 166 -------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + A +A+L + + R++ NIL K+ DF L++ I
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE + Y ++DV+S+G L L +
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAI 228
E +A+ YL + VV+R+++ N++ ++ K+ DF L K I +G T
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFC 171
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ E+ APE L Y D + G ++ ++ GR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 40 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 98
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 99 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 151
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---PLLLTHRL 165
VF NH ++ L C V E Y D ++ H++ L H
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIE---YVNGGDLMF-----HMQRQRKLPEEHAR 156
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKA 224
+ E + A+ YL + +++R+++ N+L E KL D+ + K + G T
Sbjct: 157 FYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---T 210
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
ST G+ + APE L Y D ++ G L+ ++ GR+
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 237
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 237
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLXGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 129
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 130 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 182
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPEVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 50 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 108
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 109 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 161
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAI 228
E +A+ YL + VV+R+++ N++ ++ K+ DF L K I +G T
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFC 172
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ E+ APE L Y D + G ++ ++ GR
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V RN++P N+L + A KL DF L+ + + + G+ + +PE L
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD 181
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D+++ G +L +LL G
Sbjct: 182 PYSKPVDIWACGVILYILLVG 202
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRAL 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE-YLTTGYY 244
V+ R+++P N+L E A KL DF L+++ G + +L + APE L YY
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 245 NEKTDVYSFGKLLLVLLTGRTI 266
+ D++S G + ++T R +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRAL 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F V+ R+++P N+L E A KL DF L+++ G + +L + APE
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
L YY+ D++S G + ++T R +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V RN++P N+L + A KL DF L+ + + + G+ + +PE L
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD 182
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D+++ G +L +LL G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 209
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 111
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 112 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 111
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 112 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 107
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 108 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
VV R+++P N+L + A KL DF L+ + EG+ A G+ + +PE L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFA-GTPGYLSPEVLRKD 199
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 217
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 43 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 101
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 102 DYV----REHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 154
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGXLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 209
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 106
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 107 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G + +V E +L D L+TH + + +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTF---LRTHDGQFTIMQLVGMLRGV 160
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
+ YL G+ V R++ N+L K+ DF LS+ + + A T G
Sbjct: 161 GAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD--AAXTTTGG 214
Query: 231 ---LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + APE + ++ +DV+SFG ++ +L
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 211
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 212 KAVDWWALGVLIYEMAAG 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 107
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 108 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-------GPLQTHLEPLLLTHRL-- 165
NH +I+ L+G C ++ E YC D L + + P ++
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITE---YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 166 -------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + A +A+L + + R++ NIL K+ DF L++ I
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE + Y ++DV+S+G L L +
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 56 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 114
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 115 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 167
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 49 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 107
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 108 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 160
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 52 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 110
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 111 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 163
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLX 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254
T + + + + APE + Y E D++S G
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF L+K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-------GPLQTHLEPLLLTHRL-- 165
NH +I+ L+G C ++ E YC D L + + P ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITE---YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 166 -------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + A +A+L + + R++ NIL K+ DF L++ I
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE + Y ++DV+S+G L L +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEY---AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V RN++P N+L + A KL DF L+ + + + + G L +PE L
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL---SPEVLKKD 182
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D+++ G +L +LL G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQ--THLEPL 159
E N I +Q++H ++++L LV E L DR+ T L+ +
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF--QEEYAAKLFDFSLSKSIPE 217
L ++ + + + L +++P NIL ++ K+ DF L++
Sbjct: 191 LFMKQICEGIRHMHQMYILHL---------DLKPENILCVNRDAKQIKIIDFGLARRY-- 239
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
K K G+ EF APE + + + TD++S G + +LL+G
Sbjct: 240 -KPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 74 GYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLI-----GCCLE 128
G + + D + + + + SER I M H+++L+ I G LE
Sbjct: 29 GCVWKAQLMNDFVAVKIFPLQDKQSWQSER---EIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 129 AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP----- 183
E+ L+ +L D L G + T E L H VA + ++YL P
Sbjct: 86 VEL-WLITAFHDKGSLTDYLKGNIITWNE---LCH---VAETMSRGLSYLHEDVPWCRGE 138
Query: 184 --QP-VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT 240
+P + R+ + N+L + + A L DF L+ GK +G+ + APE L
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 241 TGYYNEKT-----DVYSFGKLLLVLLT 262
++ D+Y+ G +L L++
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
LR+ ++ R+++P N+ E+ K+ DF L++ + + + + + APE
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPE 195
Query: 238 Y-LTTGYYNEKTDVYSFGKLLLVLLTGRTI----GHLSRL 272
L Y + D++S G ++ ++TG+T+ HL +L
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 102 ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRL--YGPLQTHLEPL 159
++ F + +NH +I+KL + L+ E A + D L +G ++
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---- 114
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
+ + V+ +++ + +V R+++ N+L + K+ DF S G
Sbjct: 115 ------EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTG 263
K G+ +AAPE Y+ + DV+S G +L L++G
Sbjct: 169 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLN----------VFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
T + + + + APE + Y E D++S G + + + G
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI------------MGEMIKG 221
Query: 276 GSNFFITDRVEKF 288
G F TD ++++
Sbjct: 222 GVLFPGTDHIDQW 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP-EGKTHIKASTAI 228
+T V YL V+ R+++ N+ ++ K+ DF L+ I +G+ +
Sbjct: 134 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLC 187
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ + APE L ++ + D++S G +L LL G+
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H +T + + APE L
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D +S G + +LL G
Sbjct: 239 KYDKSCDXWSLGVIXYILLCG 259
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 68 AKRAYRELVLMKCVNHKNIIGLLN----------VFTPQKSLEEFQDVYIVMELMDANLC 117
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 118 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 176
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275
T + + + + APE + Y E D++S G + + + G
Sbjct: 177 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI------------MGEMIKG 222
Query: 276 GSNFFITDRVEKF 288
G F TD ++++
Sbjct: 223 GVLFPGTDHIDQW 235
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKS--IP-EGKTHIKASTAIGSLEFAAPEYLT-T 241
++ R+++P N+L + A KL DF L+++ IP TH + +L + AP+ L +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMGS 194
Query: 242 GYYNEKTDVYSFGKLLLVLLTGRTI 266
Y+ D++S G + ++TG+ +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGVI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
+++H ++K G C E P +Y Y + L L++H + L + L++ +
Sbjct: 59 KLSHPKLVKFYGVC-SKEYP--IYIVTEYIS-NGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
+A+L + R++ N L + K+ DF +++ + + + ++ + ++
Sbjct: 115 EGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVK 170
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLL 257
++APE Y+ K+DV++FG L+
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILM 195
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKS--IP-EGKTHIKASTAIGSLEFAAPEYLT-T 241
++ R+++P N+L + A KL DF L+++ IP TH + +L + AP+ L +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMGS 194
Query: 242 GYYNEKTDVYSFGKLLLVLLTGRTI 266
Y+ D++S G + ++TG+ +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 186 VVFRNIEPWNILFQEEYAA---KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+ R+++P N+L+ + KL DF +K E +H + + + APE L
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y++ D++S G ++ +LL G
Sbjct: 193 KYDKSCDMWSLGVIMYILLCG 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 115 NHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-------GPLQTHLEPLLLTHRL-- 165
NH +I+ L+G C ++ E YC D L + + P ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITE---YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 166 -------KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218
+ + A +A+L + + R++ NIL K+ DF L++ I
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
++ A +++ APE + Y ++DV+S+G L L +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLX 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254
T + + + + APE + Y E D++S G
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIIISKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N++ ++ ++ DF +K + +G+T G+ E+ APE + + YN
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP-EGKTHIKASTAI 228
+T V YL V+ R+++ N+ ++ K+ DF L+ I +G+ +
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLC 203
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ + APE L ++ + D++S G +L LL G+
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGVI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 170 ETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP-EGKTHIKASTAI 228
+T V YL V+ R+++ N+ ++ K+ DF L+ I +G+ +
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKXLC 203
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264
G+ + APE L ++ + D++S G +L LL G+
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G + +V E +L D L+TH + + +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTF---LRTHDGQFTIMQLVGMLRGV 160
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230
+ YL G+ V R++ N+L K+ DF LS+ + + A T G
Sbjct: 161 GAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD--AAYTTTGG 214
Query: 231 ---LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + APE + ++ +DV+SFG ++ +L
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT----- 240
V+ R+I+ N+L E KL DF +S + +T + +T IG+ + APE +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 241 TGYYNEKTDVYSFGKLLLVLLTG 263
Y+ K+D++S G + + G
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEG 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
VV R+++P N+L + A KL DF L+ + +G A G+ + +PE L
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFA-GTPGYLSPEVLRKE 181
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 182 AYGKPVDIWACGVILYILLVG 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+I+ NI ++ +L DF +++ + T A IG+ + +PE YN
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKPYN 203
Query: 246 EKTDVYSFGKLLLVLLT 262
K+D+++ G +L L T
Sbjct: 204 NKSDIWALGCVLYELCT 220
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 105 FNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHR 164
+ + + M+H +++L+G CL + LV + + L + ++ H + +
Sbjct: 65 MDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVH----EHKDNIGSQLL 119
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
L ++ A + YL + +V R++ N+L + K+ DF L++ + + A
Sbjct: 120 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A E + + ++DV+S+G + L+T
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 204 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P N+L + A KL DF L+ + +G+ A G+ + +PE L
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFA-GTPGYLSPEVLRKD 208
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 209 PYGKPVDIWACGVILYILLVG 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 105 FNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHR 164
+ + + M+H +++L+G CL + LV + + L + ++ H + +
Sbjct: 88 MDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVH----EHKDNIGSQLL 142
Query: 165 LKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
L ++ A + YL + +V R++ N+L + K+ DF L++ + + A
Sbjct: 143 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+++ A E + + ++DV+S+G + L+T
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA--IGSLEFA------APE 237
V+ R+++P N+L K+ DF L++ I E T G +EF APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
LT+ Y+ DV+S G +L L R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 145 ADRLY--------GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196
DRLY G L H++ + + A L F + +++R+++ N+
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNV 151
Query: 197 LFQEEYAAKLFDFSLSKS-IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGK 255
+ E K+ DF + K + +G T G+ ++ APE + Y + D +++G
Sbjct: 152 MLDSEGHIKIADFGMCKEHMMDGVT---TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGV 208
Query: 256 LLLVLLTGR 264
LL +L G+
Sbjct: 209 LLYEMLAGQ 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 184 QPVVFRNIEPWNILFQEEYAAKLFDFSL--SKSIPEGKTHIKASTAIGSLEFAAPE-YLT 240
Q V+ R+++P N+L E KL DF L +KSIP KT+ + +L + P+ L
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTY---DNEVVTLWYRPPDILLG 174
Query: 241 TGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ Y+ + D++ G + + TGR +
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPL 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F VV R+++P NIL KL DF L++ + ++ + +L + APE
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE 189
Query: 238 YLTTGYYNEKTDVYSFG 254
L Y D++S G
Sbjct: 190 VLLQSSYATPVDLWSVG 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLX 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254
T + + + + APE + Y E D++S G
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 152 LQTHLEPLLLTHRLKVAMETANAVAY--------LRFGFPQPVVFRNIEPWNILFQEEYA 203
L THL L LK + + + Y L++ V+ R+++P N+L
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 182
Query: 204 AKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGYYNEKTDVYSFGKLLLVLL 261
K+ DF L++ H T + + + APE L + Y + D++S G +L +L
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 262 TGRTI 266
+ R I
Sbjct: 243 SNRPI 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F VV R+++P NIL KL DF L++ + ++ + +L + APE
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE 189
Query: 238 YLTTGYYNEKTDVYSFG 254
L Y D++S G
Sbjct: 190 VLLQSSYATPVDLWSVG 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F VV R+++P NIL KL DF L++ + ++ + +L + APE
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE 189
Query: 238 YLTTGYYNEKTDVYSFG 254
L Y D++S G
Sbjct: 190 VLLQSSYATPVDLWSVG 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLX 109
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 110 QVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 168
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254
T + + + + APE + Y E D++S G
Sbjct: 169 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNE 246
+ R++ NIL K+ DF L++ A +++ APE + G +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTI 348
Query: 247 KTDVYSFGKLLLVLLT-GR 264
K+DV+SFG LL+ ++T GR
Sbjct: 349 KSDVWSFGILLMEIVTYGR 367
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 173 NAVAYLRFGFPQPVVF--------RNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224
N V Y ++ Q + F R+++P N+L + KL DF L+++ G
Sbjct: 108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTF 165
Query: 225 STAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTGRTI 266
S+ + +L + AP+ L + Y+ D++S G +L ++TG+ +
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---PLLLTHRL 165
VF NH ++ L C V E Y D ++ H++ L H
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIE---YVNGGDLMF-----HMQRQRKLPEEHAR 124
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKA 224
+ E + A+ YL + +++R+++ N+L E KL D+ + K + G T
Sbjct: 125 FYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---T 178
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
S G+ + APE L Y D ++ G L+ ++ GR+
Sbjct: 179 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + APE + Y
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 246 EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288
E D++S G + + + GG F TD ++++
Sbjct: 206 ENVDIWSVGCI------------MGEMIKGGVLFPGTDHIDQW 236
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 18/189 (9%)
Query: 81 FLRDR--GPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138
+RD+ ++ +KY + E I+ + H +I++ L A+V E
Sbjct: 37 LMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 96
Query: 139 AGYCTLADRLYGPLQ-THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197
A L +R+ + + E +L + A+A+ V R+++ N L
Sbjct: 97 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---------VAHRDLKLENTL 147
Query: 198 FQEEYAA--KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKT-DVYSFG 254
A K+ DF SK+ H + +A+G+ + APE L Y+ K DV+S G
Sbjct: 148 LDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 255 KLLLVLLTG 263
L V+L G
Sbjct: 205 VTLYVMLVG 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---PLLLTHRL 165
VF NH ++ L C V E Y D ++ H++ L H
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIE---YVNGGDLMF-----HMQRQRKLPEEHAR 109
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKA 224
+ E + A+ YL + +++R+++ N+L E KL D+ + K + G T
Sbjct: 110 FYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---T 163
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
S G+ + APE L Y D ++ G L+ ++ GR+
Sbjct: 164 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS---LEFAAPEYLTTGY 243
V R++ NIL K+ DF LS+ + + + ++A+G + + APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 217 FTSASDVWSYGIVMWEVMS 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 117
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 118 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 176
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 177 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 66 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 115
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 116 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 174
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 175 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E APE + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEALAPEIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 110
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 111 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 163
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 117
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 118 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 176
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 177 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 109 VFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLE---PLLLTHRL 165
VF NH ++ L C V E Y D ++ H++ L H
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIE---YVNGGDLMF-----HMQRQRKLPEEHAR 113
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKA 224
+ E + A+ YL + +++R+++ N+L E KL D+ + K + G T
Sbjct: 114 FYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---T 167
Query: 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265
S G+ + APE L Y D ++ G L+ ++ GR+
Sbjct: 168 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 106
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 107 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 176 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 110
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 111 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 169
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 170 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 105 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 155 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 213
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 214 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 109
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 110 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 168
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 169 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLN----------VFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + APE + Y E D++S G ++
Sbjct: 176 --AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF L+ I +G ++ G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA---STAIGSLEFAAPEYL-TTG 242
+ R+++ NIL E+ + ++ DF +S + G + T +G+ + APE +
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 243 YYNEKTDVYSFGKLLLVLLTGRTIGH 268
Y+ K D++SFG + L TG H
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYH 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 106
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 107 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 110
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 111 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 169
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 170 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 114
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 167
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS---LEFAAPEYLTTGY 243
V R++ NIL K+ DF LS+ + E + ++++G + + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +D +S+G ++ +++
Sbjct: 200 FTSASDAWSYGIVMWEVMS 218
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 115
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 168
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P N+L + A KL DF L+ + +G A G+ + +PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFA-GTPGYLSPEVLRKD 181
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 105 AKRAYRELVLMKCVNHKNIISLLN----------VFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 155 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 213
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 214 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPI 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA--------IGSLEFAAPE 237
V+ R+++P N+L K+ DF L++ I E T + + + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
LT+ Y+ DV+S G +L L R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPI 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 48 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 106
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 107 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 159
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA--------IGSLEFAAPE 237
V+ R+++P N+L K+ DF L++ I E T + + + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 238 -YLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
LT+ Y+ DV+S G +L L R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++R+++P N+L ++ ++ DF +K + +G+T G+ E+ AP + + YN
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XLCGTPEYLAPAIILSKGYN 216
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D ++ G L+ + G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H T + + + APE L +
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 186 VVFRNIEPWNILFQEE---YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V R+++P N+L + A KL DF L+ + +G A G+ + +PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFA-GTPGYLSPEVLRKD 181
Query: 243 YYNEKTDVYSFGKLLLVLLTG 263
Y + D+++ G +L +LL G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 50 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLIMQLMPFGCLL 108
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 109 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 161
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA---STAIGSLEFAAPEYL-TTG 242
+ R+++ NIL E+ + ++ DF +S + G + T +G+ + APE +
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 243 YYNEKTDVYSFGKLLLVLLTGRTIGH 268
Y+ K D++SFG + L TG H
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYH 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 111
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 112 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 164
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 121
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 174
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 130
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----ETSSVGSKF 183
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 87 PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145
P+ + + R++ A++ + + +++ + +L+G CL + + L+ + + L
Sbjct: 46 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104
Query: 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205
D + + H + + + L ++ A + YL + +V R++ N+L + K
Sbjct: 105 DYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVK 157
Query: 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ DF +K + + A +++ A E + Y ++DV+S+G + L+T
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSL--EFAAPEYLTTGYY 244
V R++ NIL K+ DF LS+ + E +T+ G + + APE ++ +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 245 NEKTDVYSFGKLLLVLLT 262
+DV+SFG ++ ++T
Sbjct: 228 TSASDVWSFGIVMWEVMT 245
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLN----------VFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 175
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + APE + Y E D++S G ++
Sbjct: 176 --AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIM 215
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 186 VVFRNIEPWNILFQEE--YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY 243
++ +++P NIL +++ K+ DF S H + T I S + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYTXIQSRFYRAPEVILGAR 275
Query: 244 YNEKTDVYSFGKLLLVLLTG 263
Y D++S G +L LLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T + + + + APE + Y
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYK 208
Query: 246 EKTDVYSFGKLL 257
E D++S G ++
Sbjct: 209 ENVDLWSVGCIM 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 186 VVFRNIEPWNILFQEE--YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY 243
++ +++P NIL +++ K+ DF S H + T I S + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYTXIQSRFYRAPEVILGAR 275
Query: 244 YNEKTDVYSFGKLLLVLLTG 263
Y D++S G +L LLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS---LEFAAPEYLTTGY 243
V R++ NIL K+ DF LS+ + E + ++++G + + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +D +S+G ++ +++
Sbjct: 198 FTSASDAWSYGIVMWEVMS 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSK-SIPEGKTHIKASTAIGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ + PE + + + + APE L +
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
++ R+++P NI+ + + K+ DF L+++ T+ + + + + APE + Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 246 EKTDVYSFGKLLLVLLTGRTI 266
D++S G ++ L+ G I
Sbjct: 204 ANVDIWSVGCIMGELVKGCVI 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 130
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS-- 230
A+ YL + + R++ N L ++ K+ DF LS+ + + + ++++GS
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 183
Query: 231 -LEFAAPEYLTTGYYNEKTDVYSFGKLL 257
+ ++ PE L ++ K+D+++FG L+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS---LEFAAPEYLTTGY 243
V R + NIL K+ DF LS+ + + + ++A+G + + APE +
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 191 FTSASDVWSYGIVMWEVMS 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 101 SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLL 160
++R + +V +NHK+I+ L+ V+ P +Y ++ L
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLN----------VFTPQKSLEEFQDVYIVMELMDANLC 110
Query: 161 LTHRLKVAMETANAVAY-----LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215
++++ E + + Y ++ ++ R+++P NI+ + + K+ DF L+++
Sbjct: 111 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART- 169
Query: 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLL 257
T + + + + APE + Y E D++S G ++
Sbjct: 170 --AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIM 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V R+++P NIL KL DF L++ + + + +L + APE L Y
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPEVLLQSTYA 197
Query: 246 EKTDVYSFG 254
D++S G
Sbjct: 198 TPVDMWSVG 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I ++ H +I+KL + LV+E L D G L++ L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---- 106
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
++ N +AY + V+ R+++P N+L E K+ DF L+++ G K +
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYT 158
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
I +L + AP+ L + Y+ D++S G + ++ G
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK-ASTAIGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H + + + APE L +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK-ASTAIGSLEFAAPE-YLTTGY 243
V+ R+++P N+L K+ DF L++ H + + + APE L +
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 244 YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G +L +L+ R I
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V R+++P NIL KL DF L++ + + + +L + APE L Y
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEVLLQSTYA 189
Query: 246 EKTDVYSFG 254
D++S G
Sbjct: 190 TPVDMWSVG 198
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL GF V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNE 246
+ R++ N + E+ + DF LS+ I G + + + +++ A E L Y
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV 218
Query: 247 KTDVYSFGKLLLVLLT-GRT 265
+DV++FG + ++T G+T
Sbjct: 219 HSDVWAFGVTMWEIMTRGQT 238
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAA--KLFDFSLSKSIPEGKTHIKASTAIGSLEFAA 235
L+F + +I P NI++Q ++ K+ +F ++ + G TA E+ A
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA---PEYYA 171
Query: 236 PEYLTTGYYNEKTDVYSFGKLLLVLLTG 263
PE + TD++S G L+ VLL+G
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q +H +I++L G +++ +V E +L D L+ H + + + A
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSF---LRKHDAQFTVIQLVGMLRGIA 128
Query: 173 NAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAI 228
+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 100 ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPL 159
A++ + + + + +L+G CL + + LV + Y L D + + + L
Sbjct: 62 ANKEILDEAYVMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLLDHV----RENRGRL 116
Query: 160 LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219
L M+ A ++YL +V R++ N+L + K+ DF L++ + +
Sbjct: 117 GSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 173
Query: 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
T A +++ A E + + ++DV+S+G + L+T
Sbjct: 174 TEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I ++ H +I+KL + LV+E L D G L++ L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---- 106
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
++ N +AY + V+ R+++P N+L E K+ DF L+++ G K +
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYT 158
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ +L + AP+ L + Y+ D++S G + ++ G
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V R+++P NIL KL DF L++ + + +L + APE L Y
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEVLLQSTYA 189
Query: 246 EKTDVYSFG 254
D++S G
Sbjct: 190 TPVDMWSVG 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYE--PAGYCTLADRLYGPLQTHLEPLLLTHRL 165
I ++ H +I+KL + LV+E L D G L++ L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---- 106
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
++ N +AY + V+ R+++P N+L E K+ DF L+++ G K +
Sbjct: 107 ---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYT 158
Query: 226 TAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTG 263
+ +L + AP+ L + Y+ D++S G + ++ G
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 186 VVFRNIEPWNILFQEEYA---AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG 242
+V +++P NIL Y K+ DF +S+ I + +G+ E+ APE L
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---CELREIMGTPEYLAPEILNYD 208
Query: 243 YYNEKTDVYSFGKLLLVLLT 262
TD+++ G + +LLT
Sbjct: 209 PITTATDMWNIGIIAYMLLT 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
PL + V +T +A+ YL ++ R+++ NILF + KL DF +S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--N 185
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGY-----YNEKTDVYSFGKLLL 258
+T + + IG+ + APE + Y+ K DV+S G L+
Sbjct: 186 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 115 NHKSILKLIGCCL-------EAEMPALVYEPAGYCTLADRLY--GPLQTHLEPLLLTHRL 165
NH +IL+L+ CL EA + ++ +RL G T + L L +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
+E +A Y R+++P NIL +E L D S+ + H++ S
Sbjct: 144 CRGLEAIHAKGY---------AHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGS 191
Query: 226 TAIGSLE----------FAAPEYLTTGYY---NEKTDVYSFGKLLLVLLTG 263
+L+ + APE + + +E+TDV+S G +L ++ G
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYE-PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
++H+ +++L G C + ++ E A C L L+ L++ +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCKDVC 115
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232
A+ YL + + R++ N L ++ K+ DF LS+ + + + + + + +
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVR 171
Query: 233 FAAPEYLTTGYYNEKTDVYSFGKLL 257
++ PE L ++ K+D+++FG L+
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLM 196
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIG-SLEFAAPEYLTTGYYN 245
V R++ NIL K+ DF LS+ I + + +T + + APE + +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 246 EKTDVYSFGKLLLVLLT 262
+DV+S+G ++ +++
Sbjct: 227 SASDVWSYGIVMWEVMS 243
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAI 228
A+ + YL V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 144
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 145 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 201 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 113 QMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETA 172
Q +H +I++L G +++ +V E +L D L+ H + + + A
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGIA 128
Query: 173 NAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAI 228
+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 154
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF LS+ + PE +
Sbjct: 155 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 211 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
PL + V +T +A+ YL ++ R+++ NILF + KL DF +S
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--N 158
Query: 218 GKTHIKASTA-IGSLEFAAPEYLTTGY-----YNEKTDVYSFGKLLL 258
+T I+ + IG+ + APE + Y+ K DV+S G L+
Sbjct: 159 TRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF ++ I G + G+ EF APE +
Sbjct: 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLG 189
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 190 LEADMWSIGVITYILLSG 207
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 186 VVFRNIEPWNILFQEE--YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY 243
++ +++P NIL +++ K+ DF S H + I S + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYXXIQSRFYRAPEVILGAR 275
Query: 244 YNEKTDVYSFGKLLLVLLTG 263
Y D++S G +L LLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V R+++P NIL KL DF L++ + + +L + APE L Y
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEVLLQSTYA 189
Query: 246 EKTDVYSFG 254
D++S G
Sbjct: 190 TPVDMWSVG 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF ++ I G + G+ EF APE +
Sbjct: 154 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLG 210
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 211 LEADMWSIGVITYILLSG 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAA----KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ ++ KL DF ++ I G + G+ EF APE +
Sbjct: 140 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLG 196
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
K+A+ A+ +L V+ R+++P N+L K+ DF +S + + + +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKT 211
Query: 226 TAIGSLEFAAPEY----LTTGYYNEKTDVYSFGKLLLVL 260
G + APE L Y+ K+D++S G ++ L
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 78/194 (40%), Gaps = 31/194 (15%)
Query: 152 LQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211
+++ LEP H + + A + YL VV +++ N+L ++ K+ D L
Sbjct: 121 VKSALEPPDFVH---LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271
+ + + ++ + + APE + G ++ +D++S+G +L + +
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--------- 225
Query: 272 LATGGSNFFITDRVEKFIRSNGYMNIDPV-IVGDRSCFRKEEKLQAYV-ELAFKCLSHSA 329
G + GY N D V ++ +R + A+V L +C +
Sbjct: 226 --YGLQPYC------------GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFP 271
Query: 330 EDRPTMIDVAKKLR 343
RP D+ +LR
Sbjct: 272 SRRPRFKDIHSRLR 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 100/251 (39%), Gaps = 51/251 (20%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADR-----LYGP------------LQT 154
+++ H +++ L+G + + ++++ YC+ D + P +++
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIF---SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 155 HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214
LEP H + + A + YL VV +++ N+L ++ K+ D L +
Sbjct: 141 ALEPPDFVH---LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT 274
+ + ++ + + APE + G ++ +D++S+G +L + +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-----------Y 243
Query: 275 GGSNFFITDRVEKFIRSNGYMNIDPV-IVGDRSCFRKEEKLQAYV-ELAFKCLSHSAEDR 332
G + GY N D V ++ +R + A+V L +C + R
Sbjct: 244 GLQPYC------------GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 291
Query: 333 PTMIDVAKKLR 343
P D+ +LR
Sbjct: 292 PRFKDIHSRLR 302
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YY 244
++ R+++P N+L E KL DF L+KS G + + + + APE L Y
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 245 NEKTDVYSFGKLLLVLL 261
D+++ G +L LL
Sbjct: 191 GVGVDMWAVGCILAELL 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
K+A+ A+ +L V+ R+++P N+L K+ DF +S + + +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKD 167
Query: 226 TAIGSLEFAAPEY----LTTGYYNEKTDVYSFGKLLLVL 260
G + APE L Y+ K+D++S G ++ L
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF L++ + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 15/159 (9%)
Query: 108 IVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA--DRLYGPLQTHLEPLLLTHRL 165
I Q+ H +++ L+ LV+E + L DR + HL
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL--------- 103
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
V T + + F + R+++P NIL + KL DF ++ + +
Sbjct: 104 -VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162
Query: 226 TAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTG 263
A + + +PE L Y DV++ G + LL+G
Sbjct: 163 VA--TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
PL + V +T +A+ YL ++ R+++ NILF + KL DF +S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--N 185
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGY-----YNEKTDVYSFGKLLL 258
+ + + IG+ + APE + Y+ K DV+S G L+
Sbjct: 186 TRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 112 SQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMET 171
Q +H +I++L G +++ +V E +L D L+ H + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSF---LRKHDAQFTVIQLVGMLRGI 156
Query: 172 ANAVAYLR-FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTA 227
A+ + YL G+ V R++ NIL K+ DF L + + PE +
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 228 IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262
+ + +PE + + +DV+S+G +L +++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 173 NAVAYLRFGFPQPVVFRNIEPWNILFQ----EEYAAKLFDFSLSKSIPEG-KTHIKASTA 227
+ + YL + V+ R+++P NIL E K+ D ++ K
Sbjct: 139 DGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 228 IGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286
+ + + APE L +Y + D+++ G + LLT I H + SN + D+++
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 287 KFIRSNGY 294
+ G+
Sbjct: 256 RIFNVMGF 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAIGSLEFAAPEYLTTGY 243
V R++ NIL K+ DF +S+ + PE + + + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRK 195
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 196 FTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAIGSLEFAAPEYLTTGY 243
V R++ NIL K+ DF +S+ + PE + + + APE +
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRK 189
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 190 FTSASDVWSYGIVMWEVMS 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAIGSLEFAAPEYLTTGY 243
V R++ NIL K+ DF +S+ + PE + + + APE +
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRK 210
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 211 FTSASDVWSYGIVMWEVMS 229
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 134 LVYEPAG---YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRN 190
L++EP G Y + Y H+E + L +E A+ YLR + +
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGF--HIEDIKL-----YCIEILKALNYLR---KMSLTHTD 162
Query: 191 IEPWNILFQEEYAAKLFDFSLSKSIPEGK---------THIK-------------ASTAI 228
++P NIL + Y K + + +GK T IK + I
Sbjct: 163 LKPENILLDDPYFEK--SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSII 220
Query: 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG----RTIGHLSRLA 273
+ ++ APE + ++ +D++SFG +L L TG RT H+ LA
Sbjct: 221 NTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
PL + V +T +A+ YL ++ R+++ NILF + KL DF +S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--N 185
Query: 218 GKTHIKASTAIGSLEFAAPEYLTTGY-----YNEKTDVYSFGKLLL 258
+ + IG+ + APE + Y+ K DV+S G L+
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 27/128 (21%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF-QEEYAA------------ 204
P L H K+A + +V +L + +++P NILF Q +Y
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 205 ------KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLL 258
K+ DF + E ST + + + APE + +++ DV+S G +L+
Sbjct: 171 LINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILI 225
Query: 259 VLLTGRTI 266
G T+
Sbjct: 226 EYYLGFTV 233
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 185 PVVFRNIEPWNILFQEEYAA-KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY 243
P++ R+++ NI + K+ D L+ K A IG+ EF APE Y
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+E DVY+FG L T
Sbjct: 207 -DESVDVYAFGXCXLEXAT 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 187 VFRNIEPWNILFQEEYAAKLFDFSLSKSI---PEGKTHIKASTAIGSLEFAAPEYLTTGY 243
V R++ NIL K+ DF LS+ + PE + + + APE +
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRK 203
Query: 244 YNEKTDVYSFGKLLLVLLT 262
+ +DV+S+G ++ +++
Sbjct: 204 FTSASDVWSYGIVMWEVVS 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F + ++ R+++ N+L E +L DF +S KT K + IG+ + APE
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPE 187
Query: 238 Y-----LTTGYYNEKTDVYSFGKLLL 258
+ Y+ K D++S G L+
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLI 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 194
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 195 LEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 194
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 195 LEADMWSIGVITYILLSG 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ EF APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPE 237
L F + ++ R+++ N+L E +L DF +S KT K + IG+ + APE
Sbjct: 122 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPE 179
Query: 238 Y-----LTTGYYNEKTDVYSFGKLLL 258
+ Y+ K D++S G L+
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLI 205
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 176 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 27/128 (21%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF-QEEYAA------------ 204
P L H K+A + +V +L + +++P NILF Q +Y
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 205 ------KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLL 258
K+ DF + E ST + + APE + +++ DV+S G +L+
Sbjct: 171 LINPDIKVVDFGSATYDDE-----HHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILI 225
Query: 259 VLLTGRTI 266
G T+
Sbjct: 226 EYYLGFTV 233
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 132 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 128 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 166 KVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225
K+A+ A+ +L V+ R+++P N+L K DF +S + + +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKD 194
Query: 226 TAIGSLEFAAPE----YLTTGYYNEKTDVYSFG 254
G + APE L Y+ K+D++S G
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLG 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 158 PLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217
PL LK+ +T AV ++ P P++ R+++ N+L + KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
Query: 218 GKTHIKASTAIGSLE----------FAAPEYLTTGYYN----EKTDVYSFGKLLLVL 260
+ ++ +E + PE + Y N EK D+++ G +L +L
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL-YSNFPIGEKQDIWALGCILYLL 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 148 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 129 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
>pdb|2V2F|F Chain F, Crystal Structure Of Pbp1a From Drug-resistant Strain 5204
From Streptococcus Pneumoniae
Length = 390
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 255 KLLLVLLTGRT--IGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVG 303
K +L TGR + L++ G++ + D +EK I++ GY+ D + VG
Sbjct: 273 KTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVG 323
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 176 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + T + + +G++ + PE + +
Sbjct: 176 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK--ASTAIGSLEFAAPEYLTTGY 243
V+ R+++P N+L E K+ DF +++ + + + + + + APE + + +
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 239
Query: 244 -YNEKTDVYSFGKLLLVLLTGRTI 266
Y + D++S G + +L R +
Sbjct: 240 EYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 186 VVFRNIEPWNILFQ-EEYAAKLFDFSLSKSIPEGKTHI-KASTAIGSLEFAAPEYL-TTG 242
V+ R+++P N+ E+ K+ DF L++ + +H S + + + +P L +
Sbjct: 141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPN 200
Query: 243 YYNEKTDVYSFGKLLLVLLTGRTI 266
Y + D+++ G + +LTG+T+
Sbjct: 201 NYTKAIDMWAAGCIFAEMLTGKTL 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 178 LRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI--PEGKTHIKASTAIGSLEFAA 235
L++ V+ R+++P N+L E K+ DF +++ + + + + + + A
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 236 PEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTI 266
PE + + + Y + D++S G + +L R +
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|3EUA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|C Chain C, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|D Chain D, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|E Chain E, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|F Chain F, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|G Chain G, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|H Chain H, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
Length = 329
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 261 LTGRTIGHLSRLATGGSNF------FITDRVEKFIRS-----NGYMNIDPVIVGDRS 306
L G+TI H+ +A GGS+ ++ DR K I S N ++ +PV +G++S
Sbjct: 20 LKGKTIDHVFFVACGGSSAIXYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKS 76
>pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
MN L+G E+P LV +P Y + GPL + + + L H L + +T+
Sbjct: 41 MNTNQFKSLLGTGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQ-VPLRHILLIYDDTSL 99
Query: 174 AVAYLRF 180
LR
Sbjct: 100 PNGVLRL 106
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 190 NIEPWNILFQEEYAAK----LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+++P NI+ + K + DF L+ I G + G+ F APE +
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPAFVAPEIVNYEPLG 195
Query: 246 EKTDVYSFGKLLLVLLTG 263
+ D++S G + +LL+G
Sbjct: 196 LEADMWSIGVITYILLSG 213
>pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 114 MNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173
MN + L+G E+P LV +P Y + GPL + + + L H L + +T+
Sbjct: 53 MNTEQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQ-VPLRHILLIYDDTSL 111
Query: 174 AVAYLRF 180
LR
Sbjct: 112 PNGVLRL 118
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 148 LYGPLQTHLEP-LLLTHRLKVAMETANAVAYLRFGFPQPVVF 188
+Y L+ + P LL TH M TA AV Y + G P+ V+F
Sbjct: 1 MYSVLKQSIRPRLLATHNQFRTMITAQAVLYTQHGEPKDVLF 42
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 184 QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG- 242
Q +V ++I+P N+L K+ +++++ T+ GS F PE + G
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-IANGL 186
Query: 243 --YYNEKTDVYSFGKLLLVLLTG 263
+ K D++S G L + TG
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 148 LYGPLQTHLEP-LLLTHRLKVAMETANAVAYLRFGFPQPVVF 188
+Y L+ + P LL TH M TA AV Y + G P+ V+F
Sbjct: 1 MYSVLKQSIRPRLLATHNQFRTMITAQAVLYTQHGEPKDVLF 42
>pdb|3LF0|A Chain A, Crystal Structure Of The Atp Bound Mycobacterium
Tuberculosis Nitrogen Regulatory Pii Protein
pdb|3LF0|B Chain B, Crystal Structure Of The Atp Bound Mycobacterium
Tuberculosis Nitrogen Regulatory Pii Protein
pdb|3LF0|C Chain C, Crystal Structure Of The Atp Bound Mycobacterium
Tuberculosis Nitrogen Regulatory Pii Protein
Length = 114
Score = 28.5 bits (62), Expect = 6.2, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 21/29 (72%)
Query: 47 IRSFSSEDLKTAINNYSMRNITIDEIEGY 75
++ F+ +D+KT++ + + +T+ EI+GY
Sbjct: 10 VKPFTLDDVKTSLEDAGVLGMTVSEIQGY 38
>pdb|3BZQ|A Chain A, High Resolution Crystal Structure Of Nitrogen Regulatory
Protein (Rv2919c) Of Mycobacterium Tuberculosis
Length = 114
Score = 28.5 bits (62), Expect = 6.2, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 21/29 (72%)
Query: 47 IRSFSSEDLKTAINNYSMRNITIDEIEGY 75
++ F+ +D+KT++ + + +T+ EI+GY
Sbjct: 10 VKPFTLDDVKTSLEDAGVLGMTVSEIQGY 38
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 186 VVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN 245
+V +++P N L + KL DF ++ + + + +G++ + PE + +
Sbjct: 148 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 246 EKT-----------DVYSFGKLLLVLLTGRT-----IGHLSRL 272
+ DV+S G +L + G+T I +S+L
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
>pdb|2J7N|A Chain A, Structure Of The Rnai Polymerase From Neurospora Crassa
pdb|2J7N|B Chain B, Structure Of The Rnai Polymerase From Neurospora Crassa
pdb|2J7O|A Chain A, Structure Of The Rnai Polymerase From Neurospora Crassa
Length = 1022
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 99 YASERCFNNIVFASQMNHKSIL--KLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHL 156
Y C+ N S N +I+ L+G ++ +V+ A + L L G +
Sbjct: 708 YKERLCYIN---NSVSNKPAIILSSLVGNLVDQSKQGIVFNEASWAQLRRELLGGALSLP 764
Query: 157 EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIE 192
+P+ + E + + YL+F +P + + +E
Sbjct: 765 DPMYKSDSWLGRGEPTHIIDYLKFSIARPAIDKELE 800
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 166 KVAMETANAVAYLRFGFPQ-PVVFRNIEPWNILF--QEEYAAKLFDFSLSKSIPEGKTHI 222
K A + A+ +L P+ ++ +++P NIL + A K+ DF S + +
Sbjct: 161 KFAQQMCTALLFL--ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ----- 213
Query: 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTI 266
+ I S + +PE L Y+ D++S G +L+ + TG +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,802,933
Number of Sequences: 62578
Number of extensions: 392199
Number of successful extensions: 2317
Number of sequences better than 100.0: 951
Number of HSP's better than 100.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 425
Number of HSP's that attempted gapping in prelim test: 1178
Number of HSP's gapped (non-prelim): 1113
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)