Query 018816
Match_columns 350
No_of_seqs 258 out of 1962
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:16:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018816.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018816hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4.6E-58 1E-62 419.3 27.9 289 46-347 61-354 (361)
2 KOG0192 Tyrosine kinase specif 100.0 1.4E-51 2.9E-56 374.3 24.7 253 65-347 46-305 (362)
3 KOG0581 Mitogen-activated prot 100.0 4.4E-52 9.6E-57 361.6 20.4 251 62-340 81-334 (364)
4 KOG0615 Serine/threonine prote 100.0 1.9E-52 4.2E-57 366.8 14.8 252 59-340 171-436 (475)
5 KOG0575 Polo-like serine/threo 100.0 4.6E-51 9.9E-56 374.6 22.0 247 60-340 18-268 (592)
6 KOG0591 NIMA (never in mitosis 100.0 8.9E-53 1.9E-57 352.3 9.6 259 60-344 19-284 (375)
7 KOG0595 Serine/threonine-prote 100.0 3.5E-51 7.6E-56 359.1 19.5 201 59-271 9-218 (429)
8 KOG0197 Tyrosine kinases [Sign 100.0 3.6E-51 7.8E-56 371.3 19.4 254 64-348 210-464 (468)
9 KOG0598 Ribosomal protein S6 k 100.0 2.5E-48 5.4E-53 338.0 17.3 243 58-333 23-269 (357)
10 KOG1026 Nerve growth factor re 100.0 3E-48 6.4E-53 368.7 15.3 264 60-349 486-766 (774)
11 KOG0578 p21-activated serine/t 100.0 1.2E-47 2.6E-52 349.5 18.2 247 61-340 274-522 (550)
12 KOG0198 MEKK and related serin 100.0 3.7E-47 8E-52 335.6 18.3 255 60-342 17-277 (313)
13 KOG0593 Predicted protein kina 100.0 1.3E-47 2.8E-52 324.4 13.4 265 61-340 3-283 (396)
14 KOG0193 Serine/threonine prote 100.0 2.2E-47 4.8E-52 349.2 14.1 267 53-348 385-656 (678)
15 KOG0582 Ste20-like serine/thre 100.0 4.7E-46 1E-50 329.6 21.5 263 58-340 24-292 (516)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 7E-46 1.5E-50 340.6 23.0 265 59-348 6-337 (338)
17 KOG0661 MAPK related serine/th 100.0 3.9E-47 8.5E-52 338.8 13.8 262 59-340 9-290 (538)
18 KOG0592 3-phosphoinositide-dep 100.0 1.4E-46 3.1E-51 340.1 17.5 253 56-340 69-337 (604)
19 PHA02988 hypothetical protein; 100.0 2.2E-45 4.8E-50 329.0 23.9 261 45-346 10-280 (283)
20 KOG0600 Cdc2-related protein k 100.0 9.7E-46 2.1E-50 332.1 18.5 261 59-340 116-399 (560)
21 KOG0583 Serine/threonine prote 100.0 3.1E-45 6.8E-50 335.5 22.1 250 57-340 14-274 (370)
22 KOG0605 NDR and related serine 100.0 1E-45 2.3E-50 334.5 18.4 249 57-334 138-435 (550)
23 KOG0194 Protein tyrosine kinas 100.0 5.5E-46 1.2E-50 342.4 16.3 268 49-348 146-423 (474)
24 KOG0659 Cdk activating kinase 100.0 1.9E-45 4.1E-50 306.0 17.5 263 61-341 3-281 (318)
25 KOG0597 Serine-threonine prote 100.0 9.4E-46 2E-50 335.7 16.8 246 60-340 2-250 (808)
26 KOG0616 cAMP-dependent protein 100.0 5.3E-46 1.1E-50 313.7 13.9 236 60-332 44-283 (355)
27 cd05096 PTKc_DDR1 Catalytic do 100.0 9.9E-45 2.1E-49 328.1 23.3 266 60-344 5-304 (304)
28 KOG1095 Protein tyrosine kinas 100.0 6.2E-46 1.3E-50 364.7 16.2 262 61-348 693-964 (1025)
29 KOG0201 Serine/threonine prote 100.0 2.2E-46 4.7E-51 331.3 11.4 247 61-340 14-262 (467)
30 KOG4721 Serine/threonine prote 100.0 2.3E-46 5E-51 339.7 10.9 241 63-344 127-367 (904)
31 cd05104 PTKc_Kit Catalytic dom 100.0 2.8E-44 6E-49 334.2 23.0 262 59-345 34-374 (375)
32 cd05093 PTKc_TrkB Catalytic do 100.0 6.7E-44 1.5E-48 320.2 24.5 264 60-349 5-283 (288)
33 cd05631 STKc_GRK4 Catalytic do 100.0 3.9E-44 8.5E-49 321.3 22.1 250 62-340 2-260 (285)
34 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.2E-44 1.6E-48 316.4 23.4 256 59-345 4-265 (266)
35 cd05048 PTKc_Ror Catalytic Dom 100.0 9.1E-44 2E-48 318.4 23.6 260 60-345 5-283 (283)
36 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-44 3.7E-49 335.4 18.6 263 59-346 37-373 (374)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6E-44 1.3E-48 327.2 21.2 253 60-341 1-257 (333)
38 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-43 3.3E-48 322.1 23.7 258 60-348 7-271 (316)
39 cd05612 STKc_PRKX_like Catalyt 100.0 5.2E-44 1.1E-48 321.4 20.0 245 60-341 1-254 (291)
40 cd05094 PTKc_TrkC Catalytic do 100.0 2.8E-43 6E-48 316.7 24.3 264 60-349 5-286 (291)
41 KOG0588 Serine/threonine prote 100.0 2E-44 4.4E-49 332.6 17.1 247 60-341 12-263 (786)
42 cd05049 PTKc_Trk Catalytic dom 100.0 2E-43 4.3E-48 315.6 23.1 259 60-344 5-280 (280)
43 cd05052 PTKc_Abl Catalytic dom 100.0 3.4E-43 7.3E-48 311.5 24.2 255 60-345 6-262 (263)
44 cd05571 STKc_PKB Catalytic dom 100.0 8.3E-44 1.8E-48 324.8 20.9 240 67-340 2-250 (323)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-43 1E-47 321.0 25.6 197 60-269 5-204 (331)
46 PTZ00267 NIMA-related protein 100.0 1.3E-43 2.8E-48 339.3 22.7 253 61-340 68-322 (478)
47 PTZ00263 protein kinase A cata 100.0 7.6E-44 1.6E-48 325.8 19.9 245 59-340 17-270 (329)
48 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.1E-43 6.6E-48 310.5 23.1 251 60-342 4-255 (256)
49 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-43 6.3E-48 311.4 22.9 255 60-345 6-261 (261)
50 PF07714 Pkinase_Tyr: Protein 100.0 4.1E-44 9E-49 316.7 17.1 249 65-342 4-259 (259)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 1.8E-43 4E-48 317.1 21.3 271 60-340 1-283 (287)
52 KOG0599 Phosphorylase kinase g 100.0 3.4E-44 7.4E-49 299.7 14.9 253 57-340 14-282 (411)
53 KOG0580 Serine/threonine prote 100.0 3.3E-44 7.1E-49 294.5 14.5 249 59-341 21-273 (281)
54 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.2E-43 4.7E-48 312.1 20.9 257 58-345 4-261 (261)
55 cd05033 PTKc_EphR Catalytic do 100.0 7.9E-43 1.7E-47 309.6 24.4 257 59-345 3-265 (266)
56 KOG0611 Predicted serine/threo 100.0 2.8E-44 6.1E-49 314.8 14.7 246 60-341 53-303 (668)
57 cd05111 PTK_HER3 Pseudokinase 100.0 8.7E-43 1.9E-47 311.6 24.6 259 60-349 7-272 (279)
58 cd05068 PTKc_Frk_like Catalyti 100.0 7.8E-43 1.7E-47 308.7 23.7 256 59-345 5-261 (261)
59 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-43 4E-48 321.0 20.2 239 69-340 1-246 (312)
60 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.5E-43 3.2E-48 330.8 20.0 264 59-347 36-399 (400)
61 cd05084 PTKc_Fes Catalytic dom 100.0 8.5E-43 1.8E-47 306.8 23.7 248 67-344 2-252 (252)
62 KOG1989 ARK protein kinase fam 100.0 1.4E-43 3.1E-48 338.1 19.9 260 59-348 36-314 (738)
63 KOG0660 Mitogen-activated prot 100.0 5.2E-44 1.1E-48 310.0 15.3 268 57-340 19-309 (359)
64 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-42 2.7E-47 312.3 24.4 263 61-349 1-290 (290)
65 PTZ00283 serine/threonine prot 100.0 4.2E-43 9E-48 336.3 22.6 262 53-341 25-297 (496)
66 KOG0589 Serine/threonine prote 100.0 2E-44 4.2E-49 326.3 12.5 251 60-341 4-258 (426)
67 cd05595 STKc_PKB_beta Catalyti 100.0 4.4E-43 9.4E-48 320.0 21.4 240 67-340 2-250 (323)
68 cd05062 PTKc_IGF-1R Catalytic 100.0 8.2E-43 1.8E-47 311.4 22.4 261 58-344 4-277 (277)
69 PTZ00426 cAMP-dependent protei 100.0 3.3E-43 7.1E-48 322.7 20.0 245 59-340 29-283 (340)
70 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-42 5.3E-47 307.3 24.9 257 63-345 2-271 (272)
71 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.1E-43 1.1E-47 314.6 20.6 264 60-340 5-284 (288)
72 cd05054 PTKc_VEGFR Catalytic d 100.0 4.3E-43 9.3E-48 321.7 20.5 264 60-348 7-336 (337)
73 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-42 2.3E-47 307.2 22.2 252 60-343 4-256 (256)
74 cd08228 STKc_Nek6 Catalytic do 100.0 1.8E-42 4E-47 307.2 23.7 261 60-346 2-266 (267)
75 cd05593 STKc_PKB_gamma Catalyt 100.0 7E-43 1.5E-47 319.3 21.5 241 67-341 2-251 (328)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-42 4E-47 317.1 24.2 198 59-269 4-204 (333)
77 cd05599 STKc_NDR_like Catalyti 100.0 4.5E-43 9.7E-48 325.2 20.3 252 60-340 1-295 (364)
78 cd05109 PTKc_HER2 Catalytic do 100.0 2.7E-42 5.8E-47 308.3 24.5 259 60-349 7-272 (279)
79 KOG0196 Tyrosine kinase, EPH ( 100.0 4.9E-45 1.1E-49 341.6 7.0 274 45-349 605-895 (996)
80 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-42 2.7E-47 312.6 22.3 264 57-346 9-292 (293)
81 KOG0694 Serine/threonine prote 100.0 1.4E-43 3.1E-48 329.0 16.4 243 58-335 366-613 (694)
82 PHA03212 serine/threonine kina 100.0 1.7E-42 3.7E-47 323.3 23.1 262 60-340 92-375 (391)
83 KOG4278 Protein tyrosine kinas 100.0 1.8E-43 3.9E-48 323.8 16.0 266 53-349 260-527 (1157)
84 KOG2345 Serine/threonine prote 100.0 1.5E-43 3.2E-48 292.0 13.9 262 58-346 19-301 (302)
85 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-42 4.7E-47 305.1 22.4 251 60-342 4-255 (256)
86 cd05090 PTKc_Ror1 Catalytic do 100.0 3E-42 6.6E-47 308.6 23.6 259 60-344 5-282 (283)
87 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.4E-43 1.8E-47 320.0 20.1 264 61-340 1-289 (338)
88 PLN00034 mitogen-activated pro 100.0 2E-42 4.2E-47 319.6 22.5 248 60-341 74-328 (353)
89 KOG1094 Discoidin domain recep 100.0 1.8E-43 3.8E-48 321.8 15.1 261 64-346 542-805 (807)
90 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6E-42 1.3E-46 303.7 24.7 261 60-346 2-266 (267)
91 cd05628 STKc_NDR1 Catalytic do 100.0 2.2E-42 4.7E-47 320.4 22.6 253 60-341 1-293 (363)
92 cd05626 STKc_LATS2 Catalytic d 100.0 1.8E-42 3.9E-47 323.0 22.1 252 61-340 2-304 (381)
93 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.9E-42 6.4E-47 311.8 22.8 266 59-340 4-287 (303)
94 cd05115 PTKc_Zap-70 Catalytic 100.0 5.6E-42 1.2E-46 302.7 24.0 247 70-346 4-256 (257)
95 cd08229 STKc_Nek7 Catalytic do 100.0 4.2E-42 9.1E-47 304.9 23.3 261 60-346 2-266 (267)
96 cd05071 PTKc_Src Catalytic dom 100.0 5.5E-42 1.2E-46 303.6 24.0 255 60-346 6-261 (262)
97 cd05596 STKc_ROCK Catalytic do 100.0 7.4E-43 1.6E-47 324.1 19.2 254 58-341 41-304 (370)
98 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.5E-43 1.4E-47 322.4 18.7 253 60-341 1-285 (350)
99 cd05116 PTKc_Syk Catalytic dom 100.0 6.5E-42 1.4E-46 302.2 24.2 248 67-346 2-256 (257)
100 cd05092 PTKc_TrkA Catalytic do 100.0 3.4E-42 7.3E-47 307.9 22.5 259 60-344 5-280 (280)
101 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.6E-42 9.9E-47 306.6 23.2 260 59-344 5-277 (277)
102 cd05091 PTKc_Ror2 Catalytic do 100.0 3E-42 6.4E-47 308.6 22.1 258 61-344 6-282 (283)
103 cd05035 PTKc_Axl_like Catalyti 100.0 8.4E-42 1.8E-46 303.8 24.8 258 62-345 1-272 (273)
104 cd05043 PTK_Ryk Pseudokinase d 100.0 7.7E-42 1.7E-46 305.5 24.6 265 58-348 4-279 (280)
105 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.1E-42 1.3E-46 309.9 24.2 265 58-348 13-299 (304)
106 cd05032 PTKc_InsR_like Catalyt 100.0 3.4E-42 7.4E-47 307.1 22.1 260 59-344 5-277 (277)
107 cd05055 PTKc_PDGFR Catalytic d 100.0 6.7E-42 1.5E-46 309.3 24.2 259 59-345 34-301 (302)
108 cd05605 STKc_GRK4_like Catalyt 100.0 3.4E-42 7.4E-47 308.7 22.0 251 61-340 1-260 (285)
109 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-42 6.6E-47 314.6 22.1 244 62-340 1-256 (324)
110 KOG0663 Protein kinase PITSLRE 100.0 3.6E-43 7.8E-48 301.0 14.8 262 58-340 74-360 (419)
111 cd05601 STKc_CRIK Catalytic do 100.0 7.2E-43 1.6E-47 319.6 17.9 252 60-340 1-262 (330)
112 cd05588 STKc_aPKC Catalytic do 100.0 2.9E-42 6.3E-47 315.4 21.8 249 67-340 2-261 (329)
113 cd05097 PTKc_DDR_like Catalyti 100.0 4.8E-42 1E-46 309.2 22.8 266 60-344 5-295 (295)
114 cd05051 PTKc_DDR Catalytic dom 100.0 5.3E-42 1.2E-46 308.9 22.9 266 60-344 5-296 (296)
115 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-42 2.5E-47 317.5 18.8 240 67-340 2-251 (325)
116 cd08529 STKc_FA2-like Catalyti 100.0 7.5E-42 1.6E-46 301.2 23.3 250 61-341 1-253 (256)
117 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.8E-42 2.1E-46 305.4 24.4 266 60-345 4-283 (284)
118 KOG0585 Ca2+/calmodulin-depend 100.0 5.9E-43 1.3E-47 311.9 16.2 255 56-341 93-372 (576)
119 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-41 2.7E-46 299.0 24.6 246 67-343 2-249 (250)
120 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.3E-42 2E-46 302.9 24.0 257 59-345 4-267 (268)
121 cd05095 PTKc_DDR2 Catalytic do 100.0 7.6E-42 1.6E-46 308.1 23.6 266 60-344 5-296 (296)
122 cd05629 STKc_NDR_like_fungal C 100.0 2E-42 4.4E-47 322.3 20.4 253 60-341 1-305 (377)
123 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.4E-42 1.6E-46 309.8 23.5 264 59-348 17-302 (307)
124 cd05607 STKc_GRK7 Catalytic do 100.0 4.8E-42 1E-46 306.5 21.9 245 69-340 1-249 (277)
125 cd05050 PTKc_Musk Catalytic do 100.0 7.6E-42 1.6E-46 306.8 23.3 260 59-344 4-288 (288)
126 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-42 8E-47 314.6 21.6 244 67-335 2-250 (329)
127 cd05039 PTKc_Csk_like Catalyti 100.0 9E-42 1.9E-46 301.0 23.3 251 59-345 5-256 (256)
128 cd06646 STKc_MAP4K5 Catalytic 100.0 3.5E-42 7.6E-47 305.5 20.8 254 60-342 9-266 (267)
129 cd07862 STKc_CDK6 Catalytic do 100.0 4.5E-42 9.8E-47 308.5 21.8 260 60-340 1-286 (290)
130 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.8E-42 1.9E-46 301.8 23.2 253 60-344 6-259 (260)
131 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.9E-42 8.5E-47 307.9 21.1 262 63-346 7-282 (283)
132 cd05608 STKc_GRK1 Catalytic do 100.0 5.9E-42 1.3E-46 306.4 22.1 247 69-340 1-256 (280)
133 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.2E-42 4.7E-47 322.8 20.0 264 58-346 35-400 (401)
134 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-41 2.6E-46 307.0 24.2 260 60-348 2-278 (297)
135 cd05590 STKc_nPKC_eta Catalyti 100.0 3.3E-42 7.1E-47 313.8 20.6 235 67-335 2-241 (320)
136 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.4E-41 5.3E-46 300.6 25.6 255 67-343 2-268 (269)
137 cd05088 PTKc_Tie2 Catalytic do 100.0 8E-42 1.7E-46 309.0 22.8 260 59-347 6-282 (303)
138 cd05584 STKc_p70S6K Catalytic 100.0 4.8E-42 1E-46 313.2 21.5 240 67-340 3-255 (323)
139 cd05592 STKc_nPKC_theta_delta 100.0 5.5E-42 1.2E-46 311.8 21.7 239 67-339 2-246 (316)
140 cd05621 STKc_ROCK2 Catalytic d 100.0 3.1E-42 6.8E-47 319.6 20.3 256 56-341 39-304 (370)
141 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-41 2.7E-46 302.4 23.3 256 60-345 4-268 (269)
142 cd05591 STKc_nPKC_epsilon Cata 100.0 4.3E-42 9.3E-47 313.3 20.7 240 67-340 2-253 (321)
143 cd05061 PTKc_InsR Catalytic do 100.0 1.5E-41 3.2E-46 305.0 23.9 264 58-347 4-280 (288)
144 KOG0658 Glycogen synthase kina 100.0 2.3E-43 5E-48 306.5 11.6 261 61-340 25-305 (364)
145 cd05069 PTKc_Yes Catalytic dom 100.0 2E-41 4.3E-46 299.6 24.3 253 60-344 6-259 (260)
146 KOG4257 Focal adhesion tyrosin 100.0 1.2E-42 2.6E-47 318.4 16.8 251 65-347 394-651 (974)
147 cd05587 STKc_cPKC Catalytic do 100.0 5.6E-42 1.2E-46 312.9 21.1 241 61-335 1-246 (324)
148 cd05614 STKc_MSK2_N N-terminal 100.0 5E-42 1.1E-46 314.3 20.9 251 61-340 1-266 (332)
149 cd05570 STKc_PKC Catalytic dom 100.0 5.7E-42 1.2E-46 312.0 21.1 240 67-340 2-251 (318)
150 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-41 3.3E-46 300.3 23.2 254 59-344 5-259 (260)
151 cd05625 STKc_LATS1 Catalytic d 100.0 4.1E-42 8.9E-47 320.8 20.6 251 61-340 2-304 (382)
152 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-41 3.4E-46 300.2 23.0 255 59-344 5-260 (261)
153 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-41 6.5E-46 299.9 24.8 255 67-343 2-268 (269)
154 cd05056 PTKc_FAK Catalytic dom 100.0 2.5E-41 5.5E-46 300.5 24.2 257 60-348 6-268 (270)
155 cd05057 PTKc_EGFR_like Catalyt 100.0 2.9E-41 6.4E-46 301.6 24.7 259 60-349 7-272 (279)
156 cd05619 STKc_nPKC_theta Cataly 100.0 1E-41 2.2E-46 310.0 21.7 239 67-339 2-246 (316)
157 cd05620 STKc_nPKC_delta Cataly 100.0 9E-42 1.9E-46 310.4 21.3 239 67-339 2-246 (316)
158 cd05060 PTKc_Syk_like Catalyti 100.0 2.8E-41 6E-46 298.1 23.7 248 67-346 2-256 (257)
159 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.8E-41 6.1E-46 306.9 24.3 262 60-347 12-295 (314)
160 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-41 5.5E-46 299.2 23.4 252 60-341 2-260 (263)
161 cd05082 PTKc_Csk Catalytic dom 100.0 2.1E-41 4.5E-46 298.7 22.8 249 60-345 6-256 (256)
162 cd06619 PKc_MKK5 Catalytic dom 100.0 2.6E-41 5.7E-46 302.0 23.5 250 61-341 2-253 (279)
163 cd05041 PTKc_Fes_like Catalyti 100.0 3.1E-41 6.7E-46 296.6 23.6 247 67-343 2-250 (251)
164 cd05598 STKc_LATS Catalytic do 100.0 3.1E-42 6.7E-47 321.0 18.2 253 60-341 1-301 (376)
165 cd05066 PTKc_EphR_A Catalytic 100.0 3.3E-41 7.1E-46 299.4 23.8 256 60-345 4-266 (267)
166 cd00192 PTKc Catalytic domain 100.0 3.1E-41 6.7E-46 297.8 23.5 251 67-343 2-262 (262)
167 cd06624 STKc_ASK Catalytic dom 100.0 9.9E-42 2.1E-46 302.9 20.4 256 55-340 3-264 (268)
168 cd05575 STKc_SGK Catalytic dom 100.0 4.4E-42 9.5E-47 313.5 18.5 236 67-336 2-242 (323)
169 KOG0610 Putative serine/threon 100.0 7E-42 1.5E-46 300.7 19.0 252 60-339 77-390 (459)
170 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-41 2.4E-46 307.1 20.9 249 60-340 20-269 (296)
171 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-41 2.3E-46 310.9 21.0 241 61-335 1-246 (323)
172 cd07853 STKc_NLK Catalytic dom 100.0 9.8E-42 2.1E-46 317.1 20.9 265 61-340 1-287 (372)
173 cd05047 PTKc_Tie Catalytic dom 100.0 4.7E-41 1E-45 299.0 24.3 252 67-347 2-270 (270)
174 KOG0033 Ca2+/calmodulin-depend 100.0 7.1E-44 1.5E-48 293.5 5.5 251 59-340 10-266 (355)
175 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-41 8E-46 305.4 23.8 259 60-341 1-287 (308)
176 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-41 3.6E-46 310.9 21.6 252 58-341 33-293 (382)
177 cd05058 PTKc_Met_Ron Catalytic 100.0 5.4E-41 1.2E-45 297.0 24.3 251 67-347 2-261 (262)
178 KOG4279 Serine/threonine prote 100.0 6.8E-43 1.5E-47 323.4 12.4 244 67-340 582-831 (1226)
179 cd05103 PTKc_VEGFR2 Catalytic 100.0 9.8E-42 2.1E-46 313.7 20.1 264 60-348 7-342 (343)
180 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-41 9E-46 301.5 23.5 265 60-345 4-283 (284)
181 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-41 4.1E-46 309.8 21.6 242 67-335 2-248 (327)
182 cd07876 STKc_JNK2 Catalytic do 100.0 2.1E-41 4.5E-46 313.5 22.2 269 58-341 19-315 (359)
183 cd05110 PTKc_HER4 Catalytic do 100.0 3.7E-41 8.1E-46 304.6 23.3 257 60-347 7-270 (303)
184 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-41 2.6E-46 316.0 20.5 260 52-341 35-304 (371)
185 KOG0594 Protein kinase PCTAIRE 100.0 1.7E-41 3.7E-46 295.0 19.8 268 60-341 11-302 (323)
186 cd06645 STKc_MAP4K3 Catalytic 100.0 2.4E-41 5.2E-46 300.2 21.2 252 60-340 9-264 (267)
187 cd05073 PTKc_Hck Catalytic dom 100.0 5.9E-41 1.3E-45 296.6 23.6 255 59-345 5-260 (260)
188 cd05112 PTKc_Itk Catalytic dom 100.0 3.2E-41 6.9E-46 297.4 21.8 252 60-343 4-256 (256)
189 cd06656 STKc_PAK3 Catalytic do 100.0 2.7E-41 5.9E-46 304.7 21.5 249 60-340 19-268 (297)
190 PTZ00036 glycogen synthase kin 100.0 9.2E-42 2E-46 323.1 19.3 264 58-340 64-350 (440)
191 cd05602 STKc_SGK1 Catalytic do 100.0 9.5E-42 2.1E-46 311.5 18.7 240 67-340 2-246 (325)
192 cd08219 STKc_Nek3 Catalytic do 100.0 3.7E-41 8.1E-46 296.9 21.8 250 61-341 1-252 (255)
193 cd05086 PTKc_Aatyk2 Catalytic 100.0 2E-40 4.3E-45 294.6 26.5 254 67-343 2-267 (268)
194 cd05627 STKc_NDR2 Catalytic do 100.0 9.7E-42 2.1E-46 315.8 18.7 252 60-340 1-292 (360)
195 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-41 6.8E-46 302.5 21.2 250 62-340 2-260 (285)
196 cd05582 STKc_RSK_N N-terminal 100.0 7.3E-42 1.6E-46 311.4 17.2 237 67-337 3-245 (318)
197 PRK13184 pknD serine/threonine 100.0 2.2E-41 4.8E-46 334.5 21.8 264 60-347 2-292 (932)
198 PHA03207 serine/threonine kina 100.0 2.9E-41 6.3E-46 315.8 21.6 262 59-341 91-375 (392)
199 cd05044 PTKc_c-ros Catalytic d 100.0 3.9E-41 8.5E-46 299.0 21.3 252 67-344 2-269 (269)
200 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1E-40 2.2E-45 295.6 23.8 238 67-342 2-261 (262)
201 cd06655 STKc_PAK2 Catalytic do 100.0 5.7E-41 1.2E-45 302.4 22.6 249 60-340 19-268 (296)
202 PHA03211 serine/threonine kina 100.0 4.2E-41 9E-46 318.1 22.6 265 59-341 168-455 (461)
203 cd06643 STKc_SLK Catalytic dom 100.0 6.5E-41 1.4E-45 299.8 22.7 249 62-340 7-261 (282)
204 PLN00113 leucine-rich repeat r 100.0 8.1E-41 1.8E-45 346.2 26.7 272 49-349 682-955 (968)
205 cd05632 STKc_GRK5 Catalytic do 100.0 6.3E-41 1.4E-45 300.5 22.5 250 62-340 2-260 (285)
206 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.2E-41 6.9E-46 300.7 20.5 238 67-342 2-273 (274)
207 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.1E-41 1.5E-45 299.5 22.7 266 61-346 5-284 (284)
208 cd05615 STKc_cPKC_alpha Cataly 100.0 4.4E-41 9.6E-46 306.8 21.7 241 61-335 1-246 (323)
209 cd05604 STKc_SGK3 Catalytic do 100.0 1E-41 2.2E-46 311.4 17.4 239 67-339 2-245 (325)
210 cd06612 STKc_MST1_2 Catalytic 100.0 5.8E-41 1.2E-45 295.6 21.6 249 60-340 3-252 (256)
211 cd05040 PTKc_Ack_like Catalyti 100.0 8.5E-41 1.9E-45 294.8 22.6 248 67-343 2-256 (257)
212 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.1E-41 1.8E-45 306.5 23.3 262 60-347 12-295 (334)
213 KOG0574 STE20-like serine/thre 100.0 2.2E-43 4.9E-48 298.6 5.6 248 62-341 35-283 (502)
214 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.6E-41 1E-45 304.8 21.0 264 60-340 6-285 (309)
215 cd06611 STKc_SLK_like Catalyti 100.0 6.3E-41 1.4E-45 299.6 21.4 252 60-341 5-262 (280)
216 cd06613 STKc_MAP4K3_like Catal 100.0 1.3E-40 2.9E-45 294.2 23.2 253 60-340 3-259 (262)
217 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-40 3.5E-45 302.4 24.3 199 66-271 7-220 (317)
218 cd05603 STKc_SGK2 Catalytic do 100.0 3E-41 6.6E-46 307.7 19.6 236 67-336 2-242 (321)
219 cd06644 STKc_STK10_LOK Catalyt 100.0 2E-40 4.2E-45 298.3 24.4 251 60-340 12-268 (292)
220 cd06609 STKc_MST3_like Catalyt 100.0 5.4E-41 1.2E-45 299.1 20.4 248 60-340 1-250 (274)
221 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.7E-40 3.7E-45 294.5 23.3 248 62-340 2-263 (267)
222 cd08221 STKc_Nek9 Catalytic do 100.0 1.8E-40 3.8E-45 292.7 23.2 251 61-342 1-254 (256)
223 PF00069 Pkinase: Protein kina 100.0 3E-41 6.6E-46 297.9 18.2 252 62-340 1-256 (260)
224 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.5E-41 1.8E-45 298.3 21.3 245 62-340 6-252 (277)
225 cd05597 STKc_DMPK_like Catalyt 100.0 7.3E-41 1.6E-45 306.4 21.4 255 60-341 1-266 (331)
226 KOG0577 Serine/threonine prote 100.0 6E-42 1.3E-46 312.3 13.8 244 62-341 28-278 (948)
227 cd06638 STKc_myosinIIIA Cataly 100.0 5.4E-41 1.2E-45 300.8 20.0 266 49-342 7-284 (286)
228 cd06637 STKc_TNIK Catalytic do 100.0 6.6E-41 1.4E-45 298.0 20.3 253 57-340 3-268 (272)
229 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.5E-41 1.6E-45 295.6 20.3 238 67-342 2-257 (258)
230 KOG0667 Dual-specificity tyros 100.0 3.9E-41 8.5E-46 312.3 19.2 197 61-271 187-392 (586)
231 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.7E-40 5.9E-45 296.4 23.7 251 61-340 2-261 (286)
232 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-40 2.7E-45 298.8 21.5 262 61-340 1-284 (288)
233 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-40 3.7E-45 292.6 21.9 247 60-344 6-253 (254)
234 cd07874 STKc_JNK3 Catalytic do 100.0 9E-41 1.9E-45 308.8 21.1 270 57-341 14-311 (355)
235 cd05046 PTK_CCK4 Pseudokinase 100.0 5.2E-41 1.1E-45 299.3 18.8 259 60-344 5-275 (275)
236 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-40 2.5E-45 299.9 21.1 244 66-341 28-272 (292)
237 cd05586 STKc_Sck1_like Catalyt 100.0 3.3E-41 7.2E-46 308.6 17.9 240 69-340 1-252 (330)
238 cd07875 STKc_JNK1 Catalytic do 100.0 1.8E-40 4E-45 307.7 22.8 268 58-340 22-317 (364)
239 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-40 4.2E-45 297.1 22.1 257 60-341 5-266 (284)
240 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-40 4.9E-45 302.7 22.9 269 66-346 4-314 (327)
241 cd06640 STKc_MST4 Catalytic do 100.0 3.8E-40 8.2E-45 294.2 23.5 247 61-341 5-253 (277)
242 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-40 2.5E-45 306.6 20.7 261 58-340 13-297 (343)
243 cd06651 STKc_MEKK3 Catalytic d 100.0 1.9E-40 4.2E-45 294.3 21.3 250 60-340 2-260 (266)
244 cd06631 STKc_YSK4 Catalytic do 100.0 5E-40 1.1E-44 291.3 23.9 250 62-340 2-261 (265)
245 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.5E-40 3.2E-45 300.4 20.8 264 60-340 6-285 (301)
246 cd08223 STKc_Nek4 Catalytic do 100.0 4.4E-40 9.5E-45 290.2 23.3 249 61-340 1-253 (257)
247 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.1E-40 1.3E-44 292.0 24.1 258 62-345 1-272 (273)
248 cd06629 STKc_MAPKKK_Bck1_like 100.0 6E-40 1.3E-44 291.9 24.0 253 62-340 3-268 (272)
249 cd05624 STKc_MRCK_beta Catalyt 100.0 1E-40 2.3E-45 305.4 19.6 254 60-340 1-265 (331)
250 cd06630 STKc_MEKK1 Catalytic d 100.0 5.1E-40 1.1E-44 291.6 23.2 253 61-340 1-263 (268)
251 cd06639 STKc_myosinIIIB Cataly 100.0 2.4E-40 5.3E-45 297.5 21.3 263 50-340 12-286 (291)
252 PHA03209 serine/threonine kina 100.0 1.9E-40 4.2E-45 306.6 21.2 265 58-340 64-350 (357)
253 cd07867 STKc_CDC2L6 Catalytic 100.0 3.3E-40 7.2E-45 300.1 22.4 198 66-270 7-219 (317)
254 cd06659 STKc_PAK6 Catalytic do 100.0 1.9E-40 4.1E-45 299.2 20.6 244 66-341 27-271 (297)
255 cd08218 STKc_Nek1 Catalytic do 100.0 1.3E-40 2.8E-45 293.5 19.1 249 61-340 1-252 (256)
256 KOG4717 Serine/threonine prote 100.0 6.7E-41 1.4E-45 301.3 17.1 247 60-340 18-269 (864)
257 cd07861 STKc_CDK1_euk Catalyti 100.0 2.5E-40 5.5E-45 296.3 21.0 262 61-340 1-281 (285)
258 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-40 3.1E-45 295.4 19.2 254 61-343 1-268 (269)
259 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-40 4.4E-45 303.6 20.5 255 60-341 1-266 (332)
260 PTZ00266 NIMA-related protein 100.0 2.5E-40 5.4E-45 328.4 22.4 257 57-340 10-294 (1021)
261 cd06632 STKc_MEKK1_plant Catal 100.0 6.3E-40 1.4E-44 289.2 22.6 246 62-340 2-254 (258)
262 cd05609 STKc_MAST Catalytic do 100.0 4.7E-40 1E-44 297.7 22.2 256 60-344 1-273 (305)
263 cd06652 STKc_MEKK2 Catalytic d 100.0 3.7E-40 8E-45 292.3 21.1 250 60-340 2-260 (265)
264 smart00219 TyrKc Tyrosine kina 100.0 7.5E-40 1.6E-44 288.5 22.8 250 63-342 2-258 (258)
265 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7.2E-40 1.6E-44 289.1 22.7 236 67-342 2-258 (259)
266 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-40 4.3E-45 296.7 19.2 260 50-340 6-278 (282)
267 cd06605 PKc_MAPKK Catalytic do 100.0 3.9E-40 8.5E-45 291.9 20.9 252 61-340 2-256 (265)
268 KOG0199 ACK and related non-re 100.0 5.1E-41 1.1E-45 311.2 15.6 249 66-344 116-371 (1039)
269 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.3E-40 1.4E-44 293.7 22.0 264 60-340 1-282 (286)
270 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.9E-40 1.9E-44 289.6 22.6 258 60-340 1-263 (267)
271 cd06647 STKc_PAK_I Catalytic d 100.0 6.6E-40 1.4E-44 295.1 21.9 251 59-341 18-269 (293)
272 KOG2052 Activin A type IB rece 100.0 3.1E-40 6.6E-45 292.6 19.2 298 26-347 178-505 (513)
273 PTZ00284 protein kinase; Provi 100.0 2.6E-40 5.6E-45 316.2 20.0 271 54-340 123-437 (467)
274 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-39 3.1E-44 286.7 23.0 248 61-340 1-252 (256)
275 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-39 3.7E-44 290.0 23.2 246 62-341 6-253 (277)
276 cd06917 STKc_NAK1_like Catalyt 100.0 7.2E-40 1.6E-44 292.2 20.8 247 61-340 2-254 (277)
277 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-39 3.6E-44 287.4 22.9 253 60-341 1-256 (264)
278 KOG0604 MAP kinase-activated p 100.0 5.2E-41 1.1E-45 283.9 12.5 255 57-340 58-321 (400)
279 cd05574 STKc_phototropin_like 100.0 4.5E-40 9.8E-45 299.2 19.7 253 60-340 1-288 (316)
280 cd06648 STKc_PAK_II Catalytic 100.0 1.7E-39 3.7E-44 291.2 23.0 247 62-340 21-268 (285)
281 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-39 2.9E-44 292.2 22.3 261 60-340 1-265 (287)
282 cd08217 STKc_Nek2 Catalytic do 100.0 2.2E-39 4.7E-44 286.6 23.3 254 61-340 1-261 (265)
283 KOG1025 Epidermal growth facto 100.0 1.4E-40 3E-45 313.0 16.0 254 65-349 701-961 (1177)
284 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-39 3.5E-44 292.1 22.3 244 60-340 1-253 (290)
285 KOG0584 Serine/threonine prote 100.0 4.6E-41 1E-45 309.5 12.3 241 67-340 47-295 (632)
286 cd06626 STKc_MEKK4 Catalytic d 100.0 3.5E-39 7.7E-44 285.4 24.0 252 61-340 1-260 (264)
287 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.8E-40 1.5E-44 293.2 19.3 252 60-340 1-260 (283)
288 cd07832 STKc_CCRK Catalytic do 100.0 1.7E-39 3.7E-44 291.0 21.9 263 61-340 1-281 (286)
289 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-39 2.6E-44 295.3 21.0 246 60-341 15-267 (307)
290 cd07839 STKc_CDK5 Catalytic do 100.0 6E-40 1.3E-44 293.8 18.6 264 61-340 1-280 (284)
291 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.9E-40 1.7E-44 293.2 19.1 264 60-340 1-282 (286)
292 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-39 3.8E-44 288.9 21.1 256 57-340 3-271 (275)
293 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-39 5.2E-44 294.2 21.9 274 62-340 2-312 (316)
294 cd08225 STKc_Nek5 Catalytic do 100.0 2.9E-39 6.2E-44 284.9 21.2 250 61-341 1-254 (257)
295 cd05122 PKc_STE Catalytic doma 100.0 6.8E-39 1.5E-43 281.0 23.4 249 61-340 1-250 (253)
296 cd07841 STKc_CDK7 Catalytic do 100.0 2.3E-39 4.9E-44 292.1 20.6 264 61-341 1-282 (298)
297 PHA03210 serine/threonine kina 100.0 1.3E-39 2.7E-44 313.0 19.7 271 58-340 146-453 (501)
298 cd07860 STKc_CDK2_3 Catalytic 100.0 4.2E-39 9.2E-44 288.3 21.8 260 61-340 1-280 (284)
299 cd06614 STKc_PAK Catalytic dom 100.0 4.9E-39 1.1E-43 288.3 22.1 252 58-340 17-269 (286)
300 cd07833 STKc_CDKL Catalytic do 100.0 2.5E-39 5.5E-44 290.1 20.2 265 60-340 1-284 (288)
301 cd05578 STKc_Yank1 Catalytic d 100.0 2E-39 4.4E-44 286.3 19.3 247 61-339 1-253 (258)
302 cd07844 STKc_PCTAIRE_like Cata 100.0 2.4E-39 5.3E-44 290.9 20.1 262 60-340 5-287 (291)
303 KOG0579 Ste20-like serine/thre 100.0 1.4E-40 3E-45 305.5 11.6 246 65-340 37-288 (1187)
304 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.8E-39 3.8E-44 291.9 18.7 264 58-340 3-287 (291)
305 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-39 2.5E-44 292.6 17.4 256 61-341 5-267 (288)
306 cd06635 STKc_TAO1 Catalytic do 100.0 4.1E-39 9E-44 293.1 21.0 246 62-343 27-279 (317)
307 cd07843 STKc_CDC2L1 Catalytic 100.0 5.5E-39 1.2E-43 289.0 21.6 261 60-340 5-289 (293)
308 cd05572 STKc_cGK_PKG Catalytic 100.0 1E-38 2.3E-43 282.4 22.9 242 69-340 1-251 (262)
309 KOG0596 Dual specificity; seri 100.0 1.2E-39 2.5E-44 295.6 16.9 253 59-340 360-626 (677)
310 cd06657 STKc_PAK4 Catalytic do 100.0 8.2E-39 1.8E-43 287.8 22.3 243 66-340 26-269 (292)
311 KOG0607 MAP kinase-interacting 100.0 2E-39 4.4E-44 276.5 16.7 267 51-340 74-360 (463)
312 cd06606 STKc_MAPKKK Catalytic 100.0 1.4E-38 3.1E-43 280.1 22.6 251 61-340 1-256 (260)
313 cd07837 STKc_CdkB_plant Cataly 100.0 7.5E-39 1.6E-43 288.2 20.7 264 60-340 1-290 (295)
314 cd07831 STKc_MOK Catalytic dom 100.0 8.9E-39 1.9E-43 285.7 20.9 260 62-340 1-278 (282)
315 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-39 8.9E-44 295.5 19.1 266 59-341 4-292 (336)
316 KOG0986 G protein-coupled rece 100.0 2.5E-40 5.4E-45 293.6 10.3 246 60-334 185-434 (591)
317 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.5E-38 7.6E-43 279.5 24.0 250 60-340 2-260 (264)
318 cd05633 STKc_GRK3 Catalytic do 100.0 1.6E-38 3.5E-43 284.0 22.0 241 69-341 2-255 (279)
319 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-38 2.6E-43 280.6 20.8 249 61-340 1-252 (256)
320 KOG0586 Serine/threonine prote 100.0 1.9E-39 4.1E-44 298.4 15.9 251 56-341 52-306 (596)
321 cd07850 STKc_JNK Catalytic dom 100.0 2.4E-38 5.1E-43 292.4 23.1 268 58-340 14-310 (353)
322 cd05577 STKc_GRK Catalytic dom 100.0 1.7E-38 3.6E-43 283.6 21.3 244 69-340 1-253 (277)
323 cd08215 STKc_Nek Catalytic dom 100.0 2.8E-38 6.1E-43 278.2 22.4 251 61-340 1-254 (258)
324 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-38 2.8E-43 292.3 20.8 266 58-341 5-295 (337)
325 cd07865 STKc_CDK9 Catalytic do 100.0 2.5E-38 5.4E-43 286.7 22.0 267 58-340 10-306 (310)
326 cd05579 STKc_MAST_like Catalyt 100.0 4.5E-39 9.7E-44 284.6 16.7 245 69-342 1-255 (265)
327 cd06627 STKc_Cdc7_like Catalyt 100.0 3.9E-38 8.4E-43 277.0 22.5 247 61-340 1-250 (254)
328 cd07835 STKc_CDK1_like Catalyt 100.0 1.8E-38 3.8E-43 284.1 20.5 260 62-340 1-279 (283)
329 cd07845 STKc_CDK10 Catalytic d 100.0 2.2E-38 4.7E-43 287.3 21.2 265 59-340 6-289 (309)
330 cd07864 STKc_CDK12 Catalytic d 100.0 3E-38 6.5E-43 285.3 21.9 268 57-340 4-298 (302)
331 cd08216 PK_STRAD Pseudokinase 100.0 3.7E-38 8E-43 286.4 22.4 253 73-340 12-294 (314)
332 cd07855 STKc_ERK5 Catalytic do 100.0 9.9E-39 2.1E-43 292.7 18.6 266 59-340 4-293 (334)
333 PHA02882 putative serine/threo 100.0 1.9E-38 4.2E-43 285.6 20.0 258 60-342 12-293 (294)
334 cd07836 STKc_Pho85 Catalytic d 100.0 3.5E-38 7.5E-43 282.3 21.1 263 61-340 1-280 (284)
335 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-38 4.3E-43 291.0 19.8 269 59-345 4-297 (337)
336 cd05611 STKc_Rim15_like Cataly 100.0 4.2E-38 9.2E-43 278.2 20.9 241 67-341 3-248 (260)
337 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-38 5.3E-43 286.9 19.8 246 62-343 17-269 (308)
338 cd07840 STKc_CDK9_like Catalyt 100.0 6.1E-38 1.3E-42 280.8 22.0 263 62-340 1-283 (287)
339 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-37 2.9E-42 282.7 24.2 243 62-340 23-272 (313)
340 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-37 3E-42 284.4 24.4 263 70-347 7-316 (328)
341 KOG3653 Transforming growth fa 100.0 2.1E-38 4.6E-43 282.8 18.2 266 65-348 215-506 (534)
342 PHA03390 pk1 serine/threonine- 100.0 1.2E-37 2.6E-42 276.6 23.1 249 54-340 8-261 (267)
343 cd05581 STKc_PDK1 Catalytic do 100.0 4.8E-38 1E-42 280.5 20.6 249 60-340 1-276 (280)
344 cd05118 STKc_CMGC Catalytic do 100.0 6.4E-38 1.4E-42 280.2 21.1 262 62-340 1-279 (283)
345 cd06618 PKc_MKK7 Catalytic dom 100.0 8.6E-38 1.9E-42 281.7 22.0 251 60-341 15-273 (296)
346 cd05606 STKc_beta_ARK Catalyti 100.0 1.3E-37 2.9E-42 278.0 22.9 240 69-340 2-254 (278)
347 KOG4250 TANK binding protein k 100.0 1.1E-38 2.3E-43 297.4 16.0 272 62-347 15-312 (732)
348 PLN00009 cyclin-dependent kina 100.0 6.6E-38 1.4E-42 282.1 20.7 262 60-340 2-283 (294)
349 PTZ00024 cyclin-dependent prot 100.0 8.6E-38 1.9E-42 286.6 21.6 264 60-340 8-312 (335)
350 KOG1035 eIF-2alpha kinase GCN2 100.0 1.6E-38 3.5E-43 310.4 17.5 256 56-340 475-870 (1351)
351 cd07879 STKc_p38delta_MAPK13 C 100.0 5.2E-38 1.1E-42 288.9 19.9 260 60-346 15-304 (342)
352 cd05583 STKc_MSK_N N-terminal 100.0 1E-37 2.2E-42 280.0 21.1 256 61-345 1-267 (288)
353 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-37 6.3E-42 276.5 23.9 258 62-340 1-283 (287)
354 cd05613 STKc_MSK1_N N-terminal 100.0 1.9E-37 4.1E-42 278.6 22.2 251 61-340 1-267 (290)
355 cd07830 STKc_MAK_like Catalyti 100.0 1.6E-37 3.5E-42 277.8 21.2 267 62-340 1-279 (283)
356 cd07834 STKc_MAPK Catalytic do 100.0 8.7E-38 1.9E-42 285.9 19.6 266 61-346 1-296 (330)
357 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-37 2.7E-42 282.2 20.3 267 59-340 7-307 (311)
358 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-37 2.5E-42 286.9 19.8 270 48-340 5-299 (345)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9E-38 1.9E-42 285.6 19.0 265 54-341 4-288 (328)
360 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-37 2.8E-42 286.3 20.1 268 56-340 11-297 (343)
361 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-39 3.1E-44 319.3 7.3 255 57-341 1232-1494(1509)
362 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-37 3E-42 286.0 20.1 270 60-340 5-299 (342)
363 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-37 7E-42 272.5 20.6 249 62-340 2-256 (260)
364 KOG0200 Fibroblast/platelet-de 100.0 4.9E-37 1.1E-41 299.9 22.8 265 57-346 293-580 (609)
365 KOG0612 Rho-associated, coiled 100.0 2.3E-38 4.9E-43 307.2 12.8 257 53-339 68-336 (1317)
366 cd07829 STKc_CDK_like Catalyti 100.0 6.5E-37 1.4E-41 273.6 21.3 261 62-340 1-278 (282)
367 KOG0983 Mitogen-activated prot 100.0 2.7E-38 5.8E-43 264.4 11.1 246 65-340 97-348 (391)
368 cd07857 STKc_MPK1 Catalytic do 100.0 7.7E-37 1.7E-41 280.0 21.2 269 61-340 1-291 (332)
369 KOG0666 Cyclin C-dependent kin 100.0 2.6E-38 5.7E-43 268.8 10.5 276 60-340 24-336 (438)
370 cd05123 STKc_AGC Catalytic dom 100.0 1.1E-36 2.5E-41 267.2 21.1 236 69-337 1-240 (250)
371 KOG0690 Serine/threonine prote 100.0 5E-38 1.1E-42 268.7 12.0 241 59-333 167-411 (516)
372 cd07851 STKc_p38 Catalytic dom 100.0 5.3E-37 1.2E-41 282.3 19.7 258 57-340 12-297 (343)
373 cd05576 STKc_RPK118_like Catal 100.0 1.6E-36 3.5E-41 264.7 17.2 220 72-336 4-224 (237)
374 KOG4236 Serine/threonine prote 100.0 1.6E-37 3.5E-42 280.1 10.3 253 55-340 560-818 (888)
375 cd05610 STKc_MASTL Catalytic d 100.0 7.8E-36 1.7E-40 295.4 23.1 146 59-213 3-152 (669)
376 KOG0587 Traf2- and Nck-interac 100.0 1.9E-36 4.2E-41 287.6 16.8 259 52-340 11-281 (953)
377 KOG0603 Ribosomal protein S6 k 100.0 1.6E-36 3.5E-41 280.5 13.8 239 59-340 321-562 (612)
378 KOG0696 Serine/threonine prote 100.0 2.3E-36 4.9E-41 265.7 11.9 241 59-333 348-593 (683)
379 smart00220 S_TKc Serine/Threon 100.0 1.1E-34 2.3E-39 252.6 21.2 238 73-340 1-240 (244)
380 KOG1151 Tousled-like protein k 100.0 1.9E-36 4.1E-41 268.4 10.1 256 59-339 462-739 (775)
381 KOG0662 Cyclin-dependent kinas 100.0 3.2E-35 6.9E-40 232.0 14.8 260 61-340 3-282 (292)
382 KOG1006 Mitogen-activated prot 100.0 4.2E-37 9E-42 256.3 3.9 252 66-340 70-326 (361)
383 KOG1024 Receptor-like protein 100.0 2.1E-35 4.5E-40 258.0 14.4 265 58-348 282-558 (563)
384 KOG0669 Cyclin T-dependent kin 100.0 4.1E-37 8.8E-42 254.6 2.5 267 60-341 17-315 (376)
385 KOG0671 LAMMER dual specificit 100.0 2.8E-35 6.1E-40 256.8 12.9 265 59-340 88-405 (415)
386 KOG0614 cGMP-dependent protein 100.0 1.6E-36 3.4E-41 272.7 4.8 241 61-334 421-665 (732)
387 KOG0608 Warts/lats-like serine 100.0 1.1E-34 2.5E-39 266.6 16.7 205 59-272 628-876 (1034)
388 PLN03225 Serine/threonine-prot 100.0 2.2E-34 4.8E-39 278.7 18.6 261 58-340 130-449 (566)
389 KOG1027 Serine/threonine prote 100.0 2.5E-35 5.4E-40 278.8 10.0 245 62-340 511-766 (903)
390 PLN03224 probable serine/threo 100.0 1.4E-33 3E-38 267.1 20.8 268 58-340 143-499 (507)
391 KOG0695 Serine/threonine prote 100.0 5E-34 1.1E-38 245.2 13.2 249 59-333 249-502 (593)
392 KOG0664 Nemo-like MAPK-related 100.0 1E-34 2.2E-39 243.1 5.6 268 61-341 54-343 (449)
393 KOG0668 Casein kinase II, alph 100.0 9.4E-34 2E-38 231.6 10.1 259 59-340 37-321 (338)
394 KOG1152 Signal transduction se 100.0 1.9E-33 4.1E-38 256.3 10.5 198 59-269 560-771 (772)
395 KOG0984 Mitogen-activated prot 100.0 3.1E-33 6.6E-38 225.3 9.1 207 57-271 43-256 (282)
396 cd00180 PKc Catalytic domain o 100.0 5E-31 1.1E-35 224.1 20.5 211 69-342 1-215 (215)
397 KOG0576 Mitogen-activated prot 100.0 6.1E-33 1.3E-37 256.7 7.1 252 60-340 15-270 (829)
398 KOG0665 Jun-N-terminal kinase 100.0 4.9E-32 1.1E-36 231.5 10.4 263 60-340 17-309 (369)
399 KOG1290 Serine/threonine prote 100.0 8.9E-30 1.9E-34 228.4 19.9 131 60-198 78-221 (590)
400 smart00221 STYKc Protein kinas 100.0 6.6E-30 1.4E-34 220.2 18.5 199 62-269 1-202 (225)
401 KOG1345 Serine/threonine kinas 100.0 2E-30 4.3E-35 217.1 11.3 254 60-344 24-287 (378)
402 KOG0670 U4/U6-associated splic 100.0 1.5E-30 3.3E-35 234.8 10.5 199 60-270 432-638 (752)
403 KOG1167 Serine/threonine prote 100.0 4.7E-30 1E-34 226.9 11.8 270 57-340 33-380 (418)
404 PLN00181 protein SPA1-RELATED; 100.0 3.4E-29 7.4E-34 253.6 12.4 196 113-340 28-264 (793)
405 smart00750 KIND kinase non-cat 100.0 4.7E-28 1E-32 201.4 14.9 170 142-348 1-172 (176)
406 PRK09188 serine/threonine prot 99.9 7.1E-26 1.5E-30 206.2 15.6 168 55-241 13-194 (365)
407 KOG1164 Casein kinase (serine/ 99.9 5.2E-24 1.1E-28 193.9 21.3 262 61-348 19-300 (322)
408 KOG0195 Integrin-linked kinase 99.9 5.6E-26 1.2E-30 190.7 7.3 244 67-346 197-447 (448)
409 COG0515 SPS1 Serine/threonine 99.9 3.2E-23 6.9E-28 187.8 23.9 262 62-341 2-275 (384)
410 KOG1240 Protein kinase contain 99.9 2.1E-25 4.5E-30 217.1 7.2 247 61-343 24-293 (1431)
411 KOG0590 Checkpoint kinase and 99.9 5.3E-25 1.1E-29 213.1 8.3 257 65-345 323-591 (601)
412 KOG1163 Casein kinase (serine/ 99.9 2E-24 4.3E-29 178.4 10.1 262 59-346 14-285 (341)
413 KOG1165 Casein kinase (serine/ 99.9 1E-22 2.2E-27 175.5 15.7 263 58-346 26-300 (449)
414 cd05147 RIO1_euk RIO kinase fa 99.9 3.1E-23 6.7E-28 173.9 11.7 138 66-215 3-167 (190)
415 PRK10359 lipopolysaccharide co 99.9 1.7E-23 3.6E-28 177.8 9.9 170 59-261 30-216 (232)
416 KOG1023 Natriuretic peptide re 99.9 1.6E-22 3.5E-27 187.6 12.9 218 111-347 1-226 (484)
417 cd05145 RIO1_like RIO kinase f 99.9 5.1E-22 1.1E-26 167.0 13.5 140 66-217 3-169 (190)
418 PRK12274 serine/threonine prot 99.9 3.9E-21 8.5E-26 160.0 14.0 187 63-270 5-210 (218)
419 PRK10345 hypothetical protein; 99.9 3.5E-21 7.6E-26 163.0 13.4 136 63-212 5-156 (210)
420 KOG0603 Ribosomal protein S6 k 99.9 1.9E-22 4.1E-27 187.5 3.5 223 70-335 3-232 (612)
421 PF14531 Kinase-like: Kinase-l 99.8 1.1E-20 2.3E-25 165.4 11.8 233 62-332 14-288 (288)
422 KOG1166 Mitotic checkpoint ser 99.8 1.3E-20 2.8E-25 186.6 13.6 254 54-347 692-955 (974)
423 smart00090 RIO RIO-like kinase 99.8 1.2E-19 2.5E-24 157.4 12.5 143 59-215 27-198 (237)
424 KOG4158 BRPK/PTEN-induced prot 99.8 8E-20 1.7E-24 161.3 11.3 195 115-340 274-509 (598)
425 PRK14879 serine/threonine prot 99.8 2.2E-19 4.8E-24 153.7 13.0 133 67-214 3-143 (211)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.4E-20 5.1E-25 170.5 5.8 175 131-338 330-509 (516)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 3.9E-19 8.6E-24 150.7 11.4 130 69-215 2-139 (199)
428 PRK09605 bifunctional UGMP fam 99.8 6.5E-19 1.4E-23 170.9 12.9 137 59-214 332-476 (535)
429 cd05144 RIO2_C RIO kinase fami 99.8 1.5E-18 3.3E-23 147.0 13.2 146 53-217 8-177 (198)
430 KOG0606 Microtubule-associated 99.8 2.6E-19 5.6E-24 174.8 8.1 208 59-333 82-304 (1205)
431 PRK01723 3-deoxy-D-manno-octul 99.7 1E-16 2.3E-21 139.2 13.1 135 66-215 37-192 (239)
432 cd05120 APH_ChoK_like Aminogly 99.7 1.7E-16 3.6E-21 127.8 12.7 133 66-214 4-138 (155)
433 cd05119 RIO RIO kinase family, 99.7 9.6E-17 2.1E-21 134.6 11.5 134 66-215 3-164 (187)
434 KOG0590 Checkpoint kinase and 99.7 6E-18 1.3E-22 164.1 0.0 255 60-339 20-284 (601)
435 KOG1266 Protein kinase [Signal 99.6 9.3E-16 2E-20 132.7 7.3 205 109-340 119-330 (458)
436 TIGR01982 UbiB 2-polyprenylphe 99.6 1.6E-14 3.4E-19 136.1 11.7 141 66-217 123-309 (437)
437 KOG0601 Cyclin-dependent kinas 99.5 2.9E-14 6.3E-19 133.1 7.9 249 60-340 114-378 (524)
438 KOG1243 Protein kinase [Genera 99.5 2.6E-12 5.7E-17 121.4 17.5 169 80-264 31-200 (690)
439 cd05151 ChoK Choline Kinase (C 99.4 7.3E-13 1.6E-17 109.1 9.6 126 67-214 5-136 (170)
440 PRK04750 ubiB putative ubiquin 99.4 5.6E-13 1.2E-17 127.3 9.7 146 60-217 120-316 (537)
441 cd05146 RIO3_euk RIO kinase fa 99.4 9E-12 2E-16 103.9 14.0 135 67-216 4-175 (197)
442 KOG0601 Cyclin-dependent kinas 99.4 4.7E-13 1E-17 125.0 6.5 259 45-343 249-516 (524)
443 cd05154 ACAD10_11_like Acyl-Co 99.3 2.9E-11 6.3E-16 103.9 12.6 141 67-214 5-206 (223)
444 KOG0606 Microtubule-associated 99.3 2.2E-12 4.9E-17 126.9 3.9 250 58-336 802-1084(1205)
445 COG3642 Mn2+-dependent serine/ 99.3 9.3E-11 2E-15 94.8 12.3 129 69-214 4-140 (204)
446 COG4248 Uncharacterized protei 99.3 5.4E-10 1.2E-14 100.7 17.8 268 64-349 15-304 (637)
447 KOG3087 Serine/threonine prote 99.2 1.6E-10 3.5E-15 93.1 11.9 143 65-215 12-166 (229)
448 PF01163 RIO1: RIO1 family; I 99.2 5.7E-10 1.2E-14 92.7 12.6 126 76-216 1-157 (188)
449 PRK15123 lipopolysaccharide co 99.1 1.6E-09 3.4E-14 95.4 13.0 138 70-214 31-194 (268)
450 KOG3741 Poly(A) ribonuclease s 99.1 1.2E-08 2.6E-13 94.4 17.8 171 73-265 288-474 (655)
451 COG0478 RIO-like serine/threon 99.0 1.1E-08 2.4E-13 87.8 12.3 134 63-214 94-251 (304)
452 KOG2137 Protein kinase [Signal 98.9 4.4E-10 9.6E-15 107.0 2.1 151 169-340 106-264 (700)
453 PF06293 Kdo: Lipopolysacchari 98.8 2.5E-08 5.4E-13 84.8 10.6 107 101-215 55-171 (206)
454 PRK09902 hypothetical protein; 98.8 1.1E-07 2.4E-12 79.7 13.0 137 70-214 27-179 (216)
455 COG0661 AarF Predicted unusual 98.7 8.7E-08 1.9E-12 91.4 11.0 138 70-217 134-317 (517)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 4.2E-07 9.2E-12 78.3 12.2 141 67-214 8-182 (226)
457 COG1718 RIO1 Serine/threonine 98.6 7.6E-07 1.6E-11 75.9 13.0 154 50-216 35-217 (268)
458 PF12260 PIP49_C: Protein-kina 98.6 3.8E-06 8.3E-11 70.1 15.6 104 106-215 8-112 (188)
459 PF06176 WaaY: Lipopolysacchar 98.6 7E-07 1.5E-11 75.2 10.3 137 59-214 30-183 (229)
460 KOG0576 Mitogen-activated prot 98.5 1.9E-08 4.1E-13 95.3 0.8 183 66-269 248-432 (829)
461 PF10707 YrbL-PhoP_reg: PhoP r 98.5 3E-06 6.5E-11 71.1 12.6 132 66-213 7-171 (199)
462 KOG1235 Predicted unusual prot 98.4 1.3E-06 2.9E-11 83.1 10.6 158 47-217 137-357 (538)
463 cd05150 APH Aminoglycoside 3'- 98.4 2.8E-06 6E-11 74.3 12.0 136 73-213 11-192 (244)
464 PF01636 APH: Phosphotransfera 98.4 5.1E-06 1.1E-10 71.7 12.1 142 67-213 4-196 (239)
465 COG2112 Predicted Ser/Thr prot 98.3 6.7E-06 1.4E-10 66.4 10.3 127 65-214 27-155 (201)
466 PLN02876 acyl-CoA dehydrogenas 98.2 1.9E-05 4.2E-10 80.9 13.9 78 66-144 44-131 (822)
467 cd05155 APH_ChoK_like_1 Unchar 98.2 1.7E-05 3.6E-10 69.0 11.4 70 70-145 6-82 (235)
468 KOG1035 eIF-2alpha kinase GCN2 98.1 2.8E-05 6E-10 79.0 10.8 195 104-341 229-434 (1351)
469 PRK10593 hypothetical protein; 98.1 0.00011 2.3E-09 66.2 13.6 75 66-144 20-100 (297)
470 cd05157 ETNK_euk Ethanolamine 98.0 0.00011 2.5E-09 63.6 11.8 73 67-145 5-80 (235)
471 PRK09550 mtnK methylthioribose 98.0 0.00013 2.7E-09 67.9 12.5 74 67-143 33-117 (401)
472 TIGR02721 ycfN_thiK thiamine k 97.9 8.2E-05 1.8E-09 65.5 9.8 138 70-214 5-175 (256)
473 cd05153 HomoserineK_II Homoser 97.9 0.00012 2.6E-09 65.9 11.0 141 70-214 23-205 (296)
474 PF13095 FTA2: Kinetochore Sim 97.8 0.00027 5.9E-09 59.0 10.3 136 44-212 26-206 (207)
475 cd05156 ChoK_euk Choline Kinas 97.7 0.00031 6.7E-09 63.4 11.0 72 70-146 7-86 (302)
476 TIGR00938 thrB_alt homoserine 97.7 0.00093 2E-08 60.5 13.9 142 70-214 31-217 (307)
477 PRK05231 homoserine kinase; Pr 97.7 0.0016 3.5E-08 59.2 15.0 160 50-214 7-217 (319)
478 KOG2268 Serine/threonine prote 97.4 0.00029 6.3E-09 62.6 5.8 133 61-212 93-249 (465)
479 cd05152 MPH2' Macrolide 2'-Pho 97.4 0.0024 5.1E-08 56.8 11.8 31 184-214 185-216 (276)
480 KOG1826 Ras GTPase activating 97.4 4.2E-05 9E-10 79.7 -0.0 162 104-268 1276-1441(2724)
481 PLN02236 choline kinase 97.3 0.0025 5.5E-08 58.6 11.4 140 70-214 45-231 (344)
482 TIGR01767 MTRK 5-methylthiorib 97.3 0.0038 8.1E-08 57.1 11.8 77 70-148 4-92 (370)
483 PF07387 Seadorna_VP7: Seadorn 97.2 0.002 4.3E-08 54.3 7.8 151 72-263 73-224 (308)
484 COG3173 Predicted aminoglycosi 97.1 0.01 2.2E-07 53.5 12.4 129 76-216 40-230 (321)
485 PLN02756 S-methyl-5-thioribose 97.1 0.0096 2.1E-07 55.5 12.4 78 67-148 39-128 (418)
486 KOG2270 Serine/threonine prote 97.1 0.0087 1.9E-07 54.4 11.6 137 70-217 153-316 (520)
487 TIGR02906 spore_CotS spore coa 97.0 0.0099 2.1E-07 53.8 11.9 30 183-213 186-215 (313)
488 PRK12396 5-methylribose kinase 97.0 0.0044 9.5E-08 57.4 9.4 72 67-141 36-117 (409)
489 PLN02421 phosphotransferase, a 97.0 0.01 2.2E-07 54.3 11.6 141 70-215 23-214 (330)
490 TIGR02904 spore_ysxE spore coa 96.8 0.016 3.4E-07 52.5 11.0 32 183-214 195-226 (309)
491 PF03881 Fructosamin_kin: Fruc 96.7 0.024 5.3E-07 50.6 11.3 72 66-142 23-97 (288)
492 PF01633 Choline_kinase: Choli 96.7 0.015 3.2E-07 49.5 9.5 31 184-214 143-174 (211)
493 KOG1236 Predicted unusual prot 96.6 0.0082 1.8E-07 55.2 7.4 61 132-200 320-380 (565)
494 PRK11768 serine/threonine prot 96.2 0.32 6.9E-06 44.4 16.0 97 45-143 6-113 (325)
495 KOG1093 Predicted protein kina 96.2 0.011 2.3E-07 56.0 6.1 50 101-151 26-76 (725)
496 COG2334 Putative homoserine ki 96.1 0.075 1.6E-06 48.4 10.9 139 73-214 37-228 (331)
497 PTZ00384 choline kinase; Provi 96.0 0.079 1.7E-06 49.4 10.7 71 70-145 59-137 (383)
498 COG5072 ALK1 Serine/threonine 95.9 0.016 3.5E-07 52.6 5.6 56 157-215 316-371 (488)
499 PRK06148 hypothetical protein; 95.4 0.16 3.5E-06 53.6 11.7 162 48-214 9-236 (1013)
500 PF04655 APH_6_hur: Aminoglyco 95.0 0.15 3.4E-06 44.5 8.6 72 70-148 11-86 (253)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-58 Score=419.33 Aligned_cols=289 Identities=36% Similarity=0.580 Sum_probs=250.0
Q ss_pred CcccccHHHHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeee
Q 018816 46 PIRSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGC 125 (350)
Q Consensus 46 ~~~~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 125 (350)
+.+.|++.||..+|++|+..++| |+|+||.||+|...++..||||++.........+|.+|+.++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i-g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI-GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce-ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 67889999999999999999999 99999999999998888999998877643314559999999999999999999999
Q ss_pred eecCC-cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCce
Q 018816 126 CLEAE-MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA 204 (350)
Q Consensus 126 ~~~~~-~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~ 204 (350)
|.+.+ ..+||+||+++|+|.++++..... +++|..+++||.++|+||+|||..+..+|+||||||+|||||+++.+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99999 499999999999999999876422 78999999999999999999998877889999999999999999999
Q ss_pred eEcccCCCccCCC-CCcccccccc-ccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 018816 205 KLFDFSLSKSIPE-GKTHIKASTA-IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 205 kl~Dfg~~~~~~~-~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~ 282 (350)
||+|||+|+..+. ... ..+. .||.+|+|||+...+..+.++|||||||+++||+||+++.+.... .....+.
T Consensus 217 KlsDFGLa~~~~~~~~~---~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~---~~~~~l~ 290 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTS---VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP---RGELSLV 290 (361)
T ss_pred EccCccCcccCCccccc---eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC---cccccHH
Confidence 9999999976654 221 1111 599999999999999999999999999999999999998876542 2234488
Q ss_pred HHHHHHHHhcC-CCccCcccc-CCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 283 DRVEKFIRSNG-YMNIDPVIV-GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 283 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.|+++.+.++. .+.+||.+. +.... ......+..++..|++.+|.+||+|.+|++.|+.+..
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~~~~~---~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEGEYPD---EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCCCCCh---HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 88888888876 788999987 33321 1467779999999999999999999999999977653
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-51 Score=374.33 Aligned_cols=253 Identities=23% Similarity=0.292 Sum_probs=210.2
Q ss_pred ccccccCCCceEEEEEEECCCceEEEEEecccchh--hHHHHHHHHHHHHhcCCCCccceeeeeecCC-cCeEEeecCCC
Q 018816 65 RNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY--ASERCFNNIVFASQMNHKSILKLIGCCLEAE-MPALVYEPAGY 141 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~ 141 (350)
...+ |+|+||+||+|.+.+...||||++...... ..+.|.+|+.+|.+++|||||+++|+|.+.. ..++||||+++
T Consensus 46 ~~~i-G~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 46 EEVL-GSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhc-ccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 3457 999999999999988856999999875432 2568999999999999999999999999988 79999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC-eEeeccccCceEeCCCC-ceeEcccCCCccCCCCC
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQP-VVFRNIEPWNILFQEEY-AAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~ 219 (350)
|+|.++++.... ..+++..++.++.|||.||.||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~~~---~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 125 GSLSVLLHKKRK---RKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999977411 68999999999999999999999 888 99999999999999997 99999999998765432
Q ss_pred ccccccccccCCCCCCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 220 THIKASTAIGSLEFAAPEYLT--TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.......||+.|||||++. ...|+.++||||||+++|||+||..||..... ...+...+..+....+
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---------~~~~~~v~~~~~Rp~~ 267 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---------VQVASAVVVGGLRPPI 267 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHhcCCCCCC
Confidence 1223356999999999999 56899999999999999999999999986543 1112222222222221
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.. .+++.+..|+..||+.||+.||++.+++..|+.+..
T Consensus 268 p~------------~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 268 PK------------ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred Cc------------cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 11 355789999999999999999999999999998865
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-52 Score=361.57 Aligned_cols=251 Identities=17% Similarity=0.199 Sum_probs=206.4
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-cCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAE-MPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 138 (350)
......| |+|..|+||++.+ .++..+|+|.+... .+...+++.+|+++++..+||+||.++|.|.... ..+++|||
T Consensus 81 le~~~~l-G~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 81 LERLGVL-GSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred hhhhhhc-ccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3445677 9999999999999 56667788888443 3455678999999999999999999999999988 49999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
|++|||.+++... +.+++...-+++.+|++||.|||. .++||||||||+|||++..|.+||+|||.+..+.+.
T Consensus 160 MDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred cCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 9999999998654 579999999999999999999993 389999999999999999999999999999877554
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
...+.+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+..... ........+...+....
T Consensus 233 ----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~----~~~~~~~Ll~~Iv~~pp----- 299 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP----PYLDIFELLCAIVDEPP----- 299 (364)
T ss_pred ----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC----CCCCHHHHHHHHhcCCC-----
Confidence 34567799999999999999999999999999999999999999875411 11122222222221111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
|.+ ....+++++.+|+..||+.||.+|||+.++++
T Consensus 300 P~l-------P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 300 PRL-------PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCC-------CcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 11146789999999999999999999999986
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-52 Score=366.78 Aligned_cols=252 Identities=20% Similarity=0.231 Sum_probs=210.8
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh-------hHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY-------ASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
.+.|...+.| |+|+||.|-+|.. ++++.||||.+++.... ....+.+|+++|++|+|||||++++++..++
T Consensus 171 ~d~yii~~~L-GsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTL-GSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred cceeEeeeee-cCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3455666777 9999999999999 78889999999765321 1233569999999999999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC---CceeEc
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE---YAAKLF 207 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~---~~~kl~ 207 (350)
..|+||||++||+|.+.+-.. +.+.+.....++.|++.|+.||| ++||+||||||+|||++.+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEec
Confidence 999999999999999999765 56778888999999999999999 9999999999999999877 789999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY---YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 284 (350)
|||+|+..+... .+.+.||||.|.|||++.+.. +..+.|+||+||++|-+++|.+||...... ..
T Consensus 322 DFGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~---------~s 389 (475)
T KOG0615|consen 322 DFGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD---------PS 389 (475)
T ss_pred ccchhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC---------cc
Confidence 999999886544 366788999999999998764 345889999999999999999999865321 11
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+.+.++.+....+.+ ...+++..+|+.+||..||++|||+.|+|+
T Consensus 390 l~eQI~~G~y~f~p~~w---------~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 390 LKEQILKGRYAFGPLQW---------DRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHHHhcCcccccChhh---------hhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 34445555544433333 367889999999999999999999999986
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-51 Score=374.61 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=212.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc---chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS---VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
..|...+.| |+|||+.||.+++ ..+..||+|.+.+. .....+.+.+||++.++|+|||||+++++|++.++.|+|
T Consensus 18 ~~Y~~g~~L-GkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFL-GKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeee-ccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 568888888 9999999999999 88889999998763 235567899999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+|+|+.++|..++... .++++.++..+..||+.||.||| +++|+|||||..|+|++++.++||+|||+|...
T Consensus 97 LELC~~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred EEecCCccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeee
Confidence 9999999999998744 68999999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.... ....+.+|||.|.|||++....++..+||||+||++|.|+.|+|||..... .+.. ..+....+.
T Consensus 169 e~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v---------kety-~~Ik~~~Y~ 236 (592)
T KOG0575|consen 169 EYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV---------KETY-NKIKLNEYS 236 (592)
T ss_pred cCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH---------HHHH-HHHHhcCcc
Confidence 6432 245677899999999999999999999999999999999999999985421 1111 122222211
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. | ...+.+..+||.++|+.||.+|||+++|+.
T Consensus 237 ~--P-----------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 237 M--P-----------SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred c--c-----------cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 1 245567899999999999999999999986
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-53 Score=352.34 Aligned_cols=259 Identities=20% Similarity=0.220 Sum_probs=210.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceee-eeecCCc-CeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIG-CCLEAEM-PAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~~-~~l 134 (350)
.+|.+...| |.|.||+||++.. .++..||.|.+.-. +.........|+.+|++|+|||||++++ .+.+++. ++|
T Consensus 19 ~~y~Il~~I-G~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKI-GRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHH-cCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 356666777 9999999999999 78889999998643 3355677889999999999999999999 4555554 999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEeeccccCceEeCCCCceeEcccCCC
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQP--VVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
|||+|++|+|.+.+.....++ ..+++..+++++.|++.||.++|+.. .+ |+||||||.||+|+.+|.+||+|||++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qk-r~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQK-RLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHhhcccCHHHHHHHHHhcc-ccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999997644333 57999999999999999999999421 44 999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
+.+.+... ...+.+|||.||+||.+...+|+++|||||+||++|||+.-++||..... ..+.+.+.++
T Consensus 176 r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~----------~~L~~KI~qg 243 (375)
T KOG0591|consen 176 RFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL----------LSLCKKIEQG 243 (375)
T ss_pred hHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH----------HHHHHHHHcC
Confidence 98866443 24566799999999999999999999999999999999999999985421 1122233332
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+.++.+.+..+..+..|+..|+..||+.||+...++..++.
T Consensus 244 -----------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 244 -----------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 22222234778899999999999999999996655555543
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-51 Score=359.07 Aligned_cols=201 Identities=22% Similarity=0.340 Sum_probs=182.8
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
..+|.....| |.|+||+||+|++ +++..||||.+.+. .....+.+..|+.+|+.++|||||++++++.+++.++||
T Consensus 9 ~~~y~~~~~i-G~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREI-GSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhc-cCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4677778888 9999999999999 66779999999776 456677889999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC------CceeEccc
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE------YAAKLFDF 209 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~------~~~kl~Df 209 (350)
||||.||+|.++++.. +.+++..+..++.|||.||++|| +++||||||||.||||+.+ -.+||+||
T Consensus 88 MEyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred EEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 9999999999999875 57999999999999999999999 9999999999999999875 56899999
Q ss_pred CCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 271 (350)
|+|+...++. ...+.+|++.|||||++....|+.|+|+||+|+++|++++|++||+...
T Consensus 160 GfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 160 GFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred chhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9999887544 3556779999999999999999999999999999999999999998543
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-51 Score=371.28 Aligned_cols=254 Identities=24% Similarity=0.314 Sum_probs=213.5
Q ss_pred cccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCc
Q 018816 64 MRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 64 ~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s 143 (350)
..+.| |+|.||.||.|.+++...||+|.+.... ...+.|.+|+.+|++|+|+|||+++|+|..+..++||||||+.|+
T Consensus 210 l~~~L-G~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 210 LIREL-GSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHh-cCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 34567 9999999999999888899999998763 345778899999999999999999999999899999999999999
Q ss_pred hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccc
Q 018816 144 LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223 (350)
Q Consensus 144 L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 223 (350)
|.++|..... ..+...+.+.++.|||.|++||+ ++++|||||.++|||++++..+||+|||+|+.........
T Consensus 288 Ll~yLr~~~~---~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~- 360 (468)
T KOG0197|consen 288 LLDYLRTREG---GLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA- 360 (468)
T ss_pred HHHHhhhcCC---CccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceee-
Confidence 9999986322 67899999999999999999999 9999999999999999999999999999999554433322
Q ss_pred ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 224 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
.....-+..|.|||.+..+.||.+||||||||+||||+| |+.||..... ..+...+.++.. ...
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn----------~ev~~~le~GyR-lp~---- 425 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN----------EEVLELLERGYR-LPR---- 425 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH----------HHHHHHHhccCc-CCC----
Confidence 222225778999999999999999999999999999999 8888764332 223333433321 111
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
|..+++.+.+++..||+.+|++|||++.+...|+++..+
T Consensus 426 -------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 -------PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred -------CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 236788999999999999999999999999999998764
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-48 Score=338.04 Aligned_cols=243 Identities=20% Similarity=0.175 Sum_probs=204.6
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
..++|...++| |+|+||.||.++. +.++-+|+|.+.+..- ...+....|..+|.+++||.||.++..|++...+|
T Consensus 23 ~~~dF~~lkvi-GkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 23 GPDDFEILKVI-GKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred Chhheeeeeee-eccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 35789999999 9999999999999 5666889999877532 34566889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+|+||+.||.|...|.+. +.+++..+..++.+|+.||.||| +++||||||||+|||||.+|+++|+|||+|+
T Consensus 102 lVld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred EEEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccch
Confidence 999999999999999764 67999999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
..-.... .+.+.+||+.|||||++.+..|+.++|+||||+++|||++|.+||..... ..+..+.... .
T Consensus 174 ~~~~~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~---------~~~~~~I~~~-k 241 (357)
T KOG0598|consen 174 EDLKDGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV---------KKMYDKILKG-K 241 (357)
T ss_pred hcccCCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH---------HHHHHHHhcC-c
Confidence 6543322 35567899999999999999999999999999999999999999985432 2222222221 1
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP 333 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 333 (350)
....+ .-.+.+..+++...|+.||++|.
T Consensus 242 ~~~~p------------~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 LPLPP------------GYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCCCC------------ccCCHHHHHHHHHHhccCHHHhc
Confidence 11111 12456789999999999999995
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-48 Score=368.74 Aligned_cols=264 Identities=20% Similarity=0.299 Sum_probs=221.3
Q ss_pred cCcccccccccCCCceEEEEEEE------CCCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
.+....+.| |+|+||.||+|.. ++...||||.+++.... ...+|.+|+.+++.++|||||+++|+|.+++..
T Consensus 486 ~~i~~~~eL-GegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEEL-GEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhh-cCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 344556678 9999999999997 23458999999887654 788999999999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCC-----C----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 133 ALVYEPAGYCTLADRLYGPLQT-----H----LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~-----~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
++|+|||..|+|.++|...... . ..+++..+.+.||.|||.|+.||- ++.+|||||..+|+||+++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceE
Confidence 9999999999999999642110 1 234899999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 282 (350)
|||+|||+++.....+.+.......-+++|||||.+..++||.+||||||||+|||+++ |+.|+.....
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---------- 711 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---------- 711 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch----------
Confidence 99999999998877665544333335789999999999999999999999999999998 9999875432
Q ss_pred HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
+.+...+.++.. .- .++.++.++.+|+..||+.+|++||++.||-.+|+..-..+
T Consensus 712 ~EVIe~i~~g~l-L~-----------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 712 QEVIECIRAGQL-LS-----------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHHHcCCc-cc-----------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 234444444332 11 12478899999999999999999999999999999986554
No 11
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=349.47 Aligned_cols=247 Identities=20% Similarity=0.273 Sum_probs=213.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
.|.....| |+|+.|.||.+.. ..+..||||++........+-+.+|+.+|+..+|+|||.+++.|...+.+|.||||+
T Consensus 274 ~y~~~~ki-gqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 274 KYTDFKKI-GQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhcchhhh-ccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 34455566 9999999999999 677799999998887676777899999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
+||+|.+.+.. ..+++.++..|+.++++||+||| .++|+|||||.+|||++.+|.+||+|||+|..+....
T Consensus 353 ~ggsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVTK------TRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred CCCchhhhhhc------ccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99999999865 35899999999999999999999 9999999999999999999999999999998876544
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC-CCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG-YMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 298 (350)
. ...+.+|||.|||||++....|.++.||||||++++||+-|.+||-...+. .+...+...+ ..+-.
T Consensus 424 ~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl----------rAlyLIa~ng~P~lk~ 491 (550)
T KOG0578|consen 424 S--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----------RALYLIATNGTPKLKN 491 (550)
T ss_pred C--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH----------HHHHHHhhcCCCCcCC
Confidence 3 456778999999999999999999999999999999999999999854331 2222333333 22222
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+ +..+..+.+|+.+||+.||++||++.|||+
T Consensus 492 ~-----------~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 492 P-----------EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred c-----------cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 2 366789999999999999999999999997
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-47 Score=335.61 Aligned_cols=255 Identities=22% Similarity=0.248 Sum_probs=201.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCC--cCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAE--MPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 136 (350)
.++...+.| |+|+||.||++.. +++...|||..........+.+.+|+.+|.+++|||||+++|...... .+++.|
T Consensus 17 ~~~~~~~~l-G~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLL-GRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccc-cCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 345566777 9999999999999 447789999986653333677899999999999999999999855554 599999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 215 (350)
||+++|+|.+++.+.. ..+++..+..+..||+.||.||| +++|+||||||+|||++. ++.+||+|||+++..
T Consensus 96 Ey~~~GsL~~~~~~~g----~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYG----GKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999997642 26999999999999999999999 999999999999999999 799999999998876
Q ss_pred CC-CCccccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 216 PE-GKTHIKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 216 ~~-~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
.. ...........||+.|||||++..+. ...++|||||||++.||+||++||... ..............
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--------~~~~~~~~~ig~~~- 239 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--------FEEAEALLLIGRED- 239 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--------cchHHHHHHHhccC-
Confidence 53 11112233456999999999999643 335999999999999999999998742 01111111111111
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
..|.+ +...+.+..+++..|++.+|++||||.++|..-
T Consensus 240 ---~~P~i--------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 240 ---SLPEI--------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ---CCCCC--------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11211 124567899999999999999999999999854
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.3e-47 Score=324.37 Aligned_cols=265 Identities=18% Similarity=0.207 Sum_probs=203.7
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
.|+...++ |+|+||.||+++. +.|.-||||++..+.. .-.+..++|++.|++|+|+|+|.++.+|.....++||+|
T Consensus 3 kYE~Lgkv-GEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 3 KYEKLGKV-GEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred HHhhhhcc-ccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45566677 9999999999999 5667899999976543 334668899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
||+..-|. -+.... ..++...+.+++.|++.|+.|+| +++++||||||+||||+.+|.+||+|||+|+.+..
T Consensus 82 ~~dhTvL~-eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDHTVLH-ELERYP----NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecchHHHH-HHHhcc----CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99764444 443332 56889999999999999999999 99999999999999999999999999999998864
Q ss_pred CCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcch-HHHHH-------HHH
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF-ITDRV-------EKF 288 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~-------~~~ 288 (350)
+.. ..+..+.|..|.|||.+.+ .+|...+||||+||++.||++|.+.|.+.++.+ ... +...+ .+.
T Consensus 154 pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD---QLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 154 PGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID---QLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred Ccc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH---HHHHHHHHHcccCHHHHHH
Confidence 332 3445568999999999988 579999999999999999999999998765531 111 11111 111
Q ss_pred HHhcC--CCccCccccCCCCc--cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 289 IRSNG--YMNIDPVIVGDRSC--FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 289 ~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+..+. ....-|......+. .. ...+..+.+|+..||+.||++|++.++++.
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 22211 11111111111110 01 144557899999999999999999999985
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-47 Score=349.25 Aligned_cols=267 Identities=19% Similarity=0.275 Sum_probs=215.4
Q ss_pred HHHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 53 EDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 53 ~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
++.+.-.+.+.....| |+|.||+||+|.+.+ .||||.++... +...+.|.+|+..+++-+|.||+-+.|+|..+.
T Consensus 385 ~~WeIp~~ev~l~~rI-GsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERI-GSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhcccee-ccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 4444444555666777 999999999999976 69999997654 355678999999999999999999999998887
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
. .||+.+|+|-+|+.+++... ..+.+...+.|+.||++|+.||| .++|||||||..||++.+++.|||+|||
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred e-eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEeccc
Confidence 7 99999999999999998764 57899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTT---GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
++.....-..........|...|||||++.. .+|++.+||||||+++|||++|..||...... . ..
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d--q--Ii------- 602 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD--Q--II------- 602 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh--h--eE-------
Confidence 9865543333333445558899999999975 47999999999999999999999999832210 0 00
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
+.- +...+.+++.... ..+++++.+|+..||..++++||.+.+|+..|+.+..+
T Consensus 603 -fmV-GrG~l~pd~s~~~-----s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 603 -FMV-GRGYLMPDLSKIR-----SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred -EEe-cccccCccchhhh-----ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 000 1111112221111 26788999999999999999999999999999988763
No 15
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-46 Score=329.61 Aligned_cols=263 Identities=17% Similarity=0.180 Sum_probs=210.8
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
..++|....+| |.|..++||+|+. ..+..||||+++-.. ..+.+.+.+|+..|+.++||||++++..|..+..+|+|
T Consensus 24 n~~~YeL~e~I-G~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVI-GVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CccceeEEEEE-eccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 34788888998 9999999999999 556799999986543 24468899999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|.||.+||+.+.+..... ..+.+..+..|++++++||.||| .+|.||||||+.||||+.+|.|||+|||.+..+
T Consensus 103 mpfMa~GS~ldIik~~~~---~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYP---DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ehhhcCCcHHHHHHHHcc---ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 999999999999865433 45889999999999999999999 999999999999999999999999999987555
Q ss_pred CCCCccc-cc-cccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 216 PEGKTHI-KA-STAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 216 ~~~~~~~-~~-~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
....... .. .+.+||++|||||++..+ .|+.|+||||||++..||.+|..||...++. ..+...+.+
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm---------kvLl~tLqn 247 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM---------KVLLLTLQN 247 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH---------HHHHHHhcC
Confidence 4333221 12 566799999999996543 5999999999999999999999999866542 111122222
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. ...+ .+...........+.+.+++..||+.||.+|||+.++++
T Consensus 248 ~p-p~~~---t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 248 DP-PTLL---TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CC-CCcc---cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 1111 111111111255678999999999999999999999986
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7e-46 Score=340.64 Aligned_cols=265 Identities=17% Similarity=0.312 Sum_probs=206.7
Q ss_pred hcCcccccccccCCCceEEEEEEE------CCCceEEEEEecccch-hhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSVR-YASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
.++|...+.| |+|+||.||+|.+ ..+..||+|.+..... .....+.+|+.++.++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~l-G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVL-GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEe-ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3578888888 9999999999975 2234799999865432 3346788999999999 8999999999887644
Q ss_pred -cCeEEeecCCCCchhhhhhCCCCC-------------------------------------------------------
Q 018816 131 -MPALVYEPAGYCTLADRLYGPLQT------------------------------------------------------- 154 (350)
Q Consensus 131 -~~~lv~e~~~~~sL~~~l~~~~~~------------------------------------------------------- 154 (350)
..++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 688999999999999998643110
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCC
Q 018816 155 --HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLE 232 (350)
Q Consensus 155 --~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~ 232 (350)
...++++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++...............+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 0134788899999999999999999 99999999999999999999999999999986543332222333446788
Q ss_pred CCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchH
Q 018816 233 FAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKE 311 (350)
Q Consensus 233 y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
|+|||++.+..++.++|||||||++|||++ |..||..... ..........+..... + .
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~---------~~~~~~~~~~~~~~~~-~-----------~ 300 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI---------NEEFCQRLKDGTRMRA-P-----------E 300 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc---------cHHHHHHHhcCCCCCC-C-----------C
Confidence 999999998899999999999999999997 9999874321 0111122222111100 0 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 312 EKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 312 ~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..+..+.+|+.+||+.||++|||+.+|++.|+++..+
T Consensus 301 ~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 301 NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 3346789999999999999999999999999998764
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-47 Score=338.79 Aligned_cols=262 Identities=16% Similarity=0.201 Sum_probs=207.5
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHH--HHHHHHHHHhcC-CCCccceeeeeecCC-cCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASER--CFNNIVFASQMN-HKSILKLIGCCLEAE-MPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~ 133 (350)
.++|...+.| |.|.||.||+|+. .++..||||++...-.. .++ -.+|++.|++|+ |||||++.+++.+.+ .++
T Consensus 9 m~RY~~i~kl-GDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKL-GDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHh-cCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 3567777888 9999999999999 66779999999776432 333 358999999998 999999999999888 999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+|||||+ .+|++++.++. ..+++..+..|+.||++||+|+| .+|+.|||+||+|||+..+..+||+|||+|+
T Consensus 87 fVfE~Md-~NLYqLmK~R~----r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 87 FVFEFMD-CNLYQLMKDRN----RLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred eeHHhhh-hhHHHHHhhcC----CcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccc
Confidence 9999995 79999997763 68999999999999999999999 9999999999999999999999999999999
Q ss_pred cCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
.+.+... .+..+.|..|.|||++.. +.|+.+.|+||+||+++|+.+-++.|.+.... .....+...+...
T Consensus 159 ev~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~------Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 159 EVRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI------DQIYKICEVLGTP 229 (538)
T ss_pred ccccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH------HHHHHHHHHhCCC
Confidence 8876554 445568999999998875 56999999999999999999999999876542 1111111111111
Q ss_pred CCC-------------ccCccccCCC-CccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GYM-------------NIDPVIVGDR-SCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~~-------------~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ..-|...+.. ....+ .++.++.+|+.+|+++||.+||||.++++
T Consensus 230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred ccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 100 0011111111 11111 46788999999999999999999999986
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=340.08 Aligned_cols=253 Identities=21% Similarity=0.212 Sum_probs=210.5
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
.+..+||...++| |.|+|++|++|+. ..++.+|||++.+.-- ...+-+..|-.+|.+| .||.|++|+..|.+..
T Consensus 69 kk~~~DF~Fg~~l-GeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKIL-GEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE 147 (604)
T ss_pred cCChhhcchhhee-ccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence 4556789999999 9999999999999 6777999999876532 2223466888899999 7999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
.+|+|+||+++|+|.++|.+. +.+++.....++.+|+.||+||| +.|||||||||+|||||.++++||+|||
T Consensus 148 sLYFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecc
Confidence 999999999999999999764 78999999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCcc---------cc--ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcc
Q 018816 211 LSKSIPEGKTH---------IK--ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279 (350)
Q Consensus 211 ~~~~~~~~~~~---------~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 279 (350)
.|+.+...... .. ....+||..|.+||++..+..+..+|+|+|||++|+|+.|.+||..... .
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne------y 293 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE------Y 293 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH------H
Confidence 99888643221 11 1457899999999999999999999999999999999999999986543 1
Q ss_pred hHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 280 FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+-. .+... +-.+. ..+++.+.+|+.+.|..||++|+|+.+|-+
T Consensus 294 liFq----kI~~l-----~y~fp--------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 294 LIFQ----KIQAL-----DYEFP--------EGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHH----HHHHh-----cccCC--------CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 1111 11111 11111 134567899999999999999999988765
No 19
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-45 Score=328.96 Aligned_cols=261 Identities=18% Similarity=0.273 Sum_probs=207.3
Q ss_pred CCcccccHHHHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhh---HHHHHHHHHHHHhcCCCCccc
Q 018816 45 NPIRSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYA---SERCFNNIVFASQMNHKSILK 121 (350)
Q Consensus 45 ~~~~~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~ 121 (350)
..++.++.+++.. .....+ |+|++|.||+|.+.+ ..||+|.+....... .+.+.+|+.+|.+++||||++
T Consensus 10 ~~~~~i~~~~i~~-----~~~~~i-~~g~~~~v~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~ 82 (283)
T PHA02988 10 NDIKCIESDDIDK-----YTSVLI-KENDQNSIYKGIFNN-KEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILK 82 (283)
T ss_pred CcceecCHHHcCC-----CCCeEE-eeCCceEEEEEEECC-EEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4456677777732 222345 999999999999954 599999987653322 466789999999999999999
Q ss_pred eeeeeec----CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCce
Q 018816 122 LIGCCLE----AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNI 196 (350)
Q Consensus 122 ~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Ni 196 (350)
+++++.+ ....++||||+++|+|.+++... ..+++...+.++.+++.||.||| . .+++||||||+||
T Consensus 83 ~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~ni 154 (283)
T PHA02988 83 IYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSF 154 (283)
T ss_pred EeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhE
Confidence 9999876 34688999999999999999654 46889999999999999999999 6 4889999999999
Q ss_pred EeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccC
Q 018816 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT--GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT 274 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~ 274 (350)
+++.++.+||+|||++....... ....++..|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 155 ll~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-- 227 (283)
T PHA02988 155 LVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-- 227 (283)
T ss_pred EECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--
Confidence 99999999999999987653322 23348899999999976 6799999999999999999999999974321
Q ss_pred CCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 275 GGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
...............++ ..++..+.+|+.+||+.||++|||+.+|++.|+.++
T Consensus 228 -------~~~~~~i~~~~~~~~~~------------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 228 -------KEIYDLIINKNNSLKLP------------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -------HHHHHHHHhcCCCCCCC------------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11111111111111111 134567999999999999999999999999999875
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-46 Score=332.12 Aligned_cols=261 Identities=18% Similarity=0.146 Sum_probs=207.0
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 133 (350)
.+.|.....| |+|.||.||+|++ .++..||+|++.... .....-..+||.||++|+||||+++.+...+. ..+|
T Consensus 116 ~~~feki~kI-GeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKI-GEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHh-cCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 3567777888 9999999999999 777899999987654 23344567999999999999999999998876 6899
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
||+|||+ .+|..++.... -.++..++..++.|++.||+|+| .++|+|||||.+|||||++|.+||+|||+|+
T Consensus 195 lVFeYMd-hDL~GLl~~p~----vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 195 LVFEYMD-HDLSGLLSSPG----VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred EEEeccc-chhhhhhcCCC----cccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEecccccee
Confidence 9999996 58888886532 47999999999999999999999 9999999999999999999999999999999
Q ss_pred cCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
++....... .+..+-|..|.|||.+.+. .|+.+.|+||.|||+.||+.|++++...... .....+.+.....
T Consensus 267 ~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv------eQl~kIfklcGSP 339 (560)
T KOG0600|consen 267 FYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV------EQLHKIFKLCGSP 339 (560)
T ss_pred eccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH------HHHHHHHHHhCCC
Confidence 876554332 4455689999999999886 5999999999999999999999999865432 2222222222111
Q ss_pred CC-----------CccC------ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GY-----------MNID------PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~-----------~~~~------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. ..+. ..+.+.+ ..++....+|+..+|..||.+|.|+.++|.
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~-----~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETF-----KDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHh-----ccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 10 0000 0111111 244667889999999999999999999875
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-45 Score=335.55 Aligned_cols=250 Identities=23% Similarity=0.227 Sum_probs=207.6
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc----ch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecC
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS----VR-YASERCFNNIVFASQMN-HKSILKLIGCCLEA 129 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 129 (350)
...+.|...+.| |+|+||.|++|.+ ..+..||+|.+... .. ...+.+.+|+.++++++ ||||++++.++...
T Consensus 14 ~~~g~y~~~~~l-G~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 14 LSIGKYELGRTL-GSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred cccCceeeeeee-cCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 455788888888 9999999999998 66689999976553 11 23455678999999998 99999999999999
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcc
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFD 208 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~D 208 (350)
...++||||+.+|+|.+++... +++.+..+..++.|+++|++|+| +++|+||||||+|||++.+ +++||+|
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~D 164 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSD 164 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEec
Confidence 9999999999999999999773 67889999999999999999999 9999999999999999999 9999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCC-CC-ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-YN-EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
||++.... .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||+.... .....
T Consensus 165 FG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~---------~~l~~ 233 (370)
T KOG0583|consen 165 FGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV---------PNLYR 233 (370)
T ss_pred cccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH---------HHHHH
Confidence 99998874 1122355677999999999999977 86 899999999999999999999986332 12222
Q ss_pred HHHHhcCCCccCccccCCCCccchHHH-HHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 KFIRSNGYMNIDPVIVGDRSCFRKEEK-LQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+ +..+...... .. +.++..|+.+||..||..|+|+.+++.
T Consensus 234 k-i~~~~~~~p~-------------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 234 K-IRKGEFKIPS-------------YLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred H-HhcCCccCCC-------------CcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 2 2222211111 22 567899999999999999999999984
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-45 Score=334.50 Aligned_cols=249 Identities=16% Similarity=0.153 Sum_probs=200.3
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
...++|....+| |+|+||.||+++. ..|.-+|+|++.+..- ...+.+..|-.+|...++|+||+++..|++.+.+
T Consensus 138 ~~~~DFe~Lk~I-gkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 138 LSLDDFELLKVI-GKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred CCcccchhheee-ccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 356889999998 9999999999999 5555778888887643 3345577899999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
||||||++||++..+|... ..+++..+..++.+++.|+.-|| +.|+|||||||+|+|||..|++||+|||+|
T Consensus 217 YLiMEylPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs 288 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLS 288 (550)
T ss_pred EEEEEecCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeecccccc
Confidence 9999999999999999765 68999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCC---------------------Cccc------------------------cccccccCCCCCCccccccCCCCcc
Q 018816 213 KSIPEG---------------------KTHI------------------------KASTAIGSLEFAAPEYLTTGYYNEK 247 (350)
Q Consensus 213 ~~~~~~---------------------~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~ 247 (350)
...... .... .....+|||.|+|||++.+..|+..
T Consensus 289 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~ 368 (550)
T KOG0605|consen 289 TGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE 368 (550)
T ss_pred chhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcc
Confidence 533210 0000 0012469999999999999999999
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHcccc
Q 018816 248 TDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSH 327 (350)
Q Consensus 248 ~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 327 (350)
+|+||||||+|||+.|.+||....+. ...++.......-...+. ...+.+..+||.+|+.
T Consensus 369 cDwWSLG~ImyEmLvGyPPF~s~tp~---------~T~rkI~nwr~~l~fP~~----------~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 369 CDWWSLGCIMYEMLVGYPPFCSETPQ---------ETYRKIVNWRETLKFPEE----------VDLSDEAKDLITRLLC- 428 (550)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHhhhccCCCc----------CcccHHHHHHHHHHhc-
Confidence 99999999999999999999865431 112222221110000000 1344788999999999
Q ss_pred CCCCCCC
Q 018816 328 SAEDRPT 334 (350)
Q Consensus 328 ~P~~RPt 334 (350)
||++|.-
T Consensus 429 d~~~RLG 435 (550)
T KOG0605|consen 429 DPENRLG 435 (550)
T ss_pred CHHHhcC
Confidence 9999975
No 23
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-46 Score=342.37 Aligned_cols=268 Identities=24% Similarity=0.320 Sum_probs=216.7
Q ss_pred cccHHHHHHHhcCcccccccccCCCceEEEEEEEC--CC---ceEEEEEecc---cchhhHHHHHHHHHHHHhcCCCCcc
Q 018816 49 SFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLR--DR---GPILVMKYRK---SVRYASERCFNNIVFASQMNHKSIL 120 (350)
Q Consensus 49 ~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~--~~---~~vaik~~~~---~~~~~~~~~~~E~~~l~~l~h~niv 120 (350)
++.-..++-..++......| |+|+||.||+|++. ++ ..||+|.... .......++++|+.+|++++|||||
T Consensus 146 PI~r~~Wel~H~~v~l~kkL-GeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV 224 (474)
T KOG0194|consen 146 PIPRQKWELSHSDIELGKKL-GEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV 224 (474)
T ss_pred cccccccEEeccCcccccee-ecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence 34444444555666667888 99999999999993 22 2389998874 3356678899999999999999999
Q ss_pred ceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC
Q 018816 121 KLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200 (350)
Q Consensus 121 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~ 200 (350)
+++|++....++++|||+|.||+|.++|.... ..++..+++.++.+.|.||+||| +++++||||..+|+|++.
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~ 297 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSK 297 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecC
Confidence 99999999999999999999999999997753 36999999999999999999999 999999999999999999
Q ss_pred CCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcc
Q 018816 201 EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNF 279 (350)
Q Consensus 201 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~ 279 (350)
++.+||+|||+++...... .......-+..|+|||.+..+.|++++|||||||++||+++ |..||.....
T Consensus 298 ~~~vKISDFGLs~~~~~~~--~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~------- 368 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGSQYV--MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN------- 368 (474)
T ss_pred CCeEEeCccccccCCccee--eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH-------
Confidence 9999999999987653111 11112235789999999999999999999999999999999 7888875432
Q ss_pred hHHHHHHHHHHhcC-CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 280 FITDRVEKFIRSNG-YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 280 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..+...+.... .....+ ..+..+..++.+||..+|++||||.++.+.|+.+...
T Consensus 369 ---~~v~~kI~~~~~r~~~~~------------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 369 ---YEVKAKIVKNGYRMPIPS------------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred ---HHHHHHHHhcCccCCCCC------------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 23334442222 222111 3456788999999999999999999999999998754
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.9e-45 Score=306.01 Aligned_cols=263 Identities=16% Similarity=0.136 Sum_probs=206.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh--hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY--ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
.|...+++ |+|.||.||+|++ ..++.||||++...... -.....+|++.|+.++|+||+.++++|.....+.||+|
T Consensus 3 rY~~~~~l-GEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 3 RYEKLEKL-GEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhhhhh-cCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46667788 9999999999999 78889999999765322 13457899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ .+|+..+.+.. ..++..++..++.++++|++||| .+.|+||||||.|+|++++|.+||+|||+|+.+.+
T Consensus 82 fm~-tdLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ecc-ccHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 996 69999997654 57899999999999999999999 99999999999999999999999999999999877
Q ss_pred CCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC--
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY-- 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (350)
........ +-|..|.|||.+.+. .|+...|+||.||++.||+-|.+.|.+..+. .........+.....
T Consensus 154 p~~~~~~~--V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi------dQL~~If~~LGTP~~~~ 225 (318)
T KOG0659|consen 154 PNRIQTHQ--VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI------DQLSKIFRALGTPTPDQ 225 (318)
T ss_pred CCcccccc--eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH------HHHHHHHHHcCCCCccc
Confidence 65443332 579999999998876 5999999999999999999999988765442 111111111111000
Q ss_pred ----------CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 ----------MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ----------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
..+............ ...+.+..+|+.+||..||.+|+|+.++++.
T Consensus 226 WP~~~~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 226 WPEMTSLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CccccccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000000000000011 1456677999999999999999999999863
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.4e-46 Score=335.68 Aligned_cols=246 Identities=21% Similarity=0.260 Sum_probs=204.6
Q ss_pred cCcccccccccCCCceEEEEEEECC-CceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-RGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|...+.| |+|.||+||||+.+. ...||+|.+.+... ...+.+.+|++|++.++|||||.++++|++..++++|+
T Consensus 2 e~yhv~e~i-G~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMI-GEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHh-cCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 456666677 999999999999954 45677787766543 34567899999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+.| +|..++... +.+++..+..++.+++.||.||| +.+|+|||+||.|||++.++.+|++|||+|+.+.
T Consensus 81 e~a~g-~L~~il~~d-----~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~ 151 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD-----GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS 151 (808)
T ss_pred hhhhh-hHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcc
Confidence 99975 999999765 68999999999999999999999 9999999999999999999999999999999876
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.+.. ......|||.|||||.+.+.+|+..+|+||+||++||+++|++||.... +...+.....
T Consensus 152 ~~t~--vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---------i~~Lv~~I~~------ 214 (808)
T KOG0597|consen 152 TNTS--VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS---------ITQLVKSILK------ 214 (808)
T ss_pred cCce--eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH---------HHHHHHHHhc------
Confidence 5432 2334459999999999999999999999999999999999999997432 1111111111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
||.. ++...+..+.+|+...|..||..|.|..+++.
T Consensus 215 -d~v~-------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 215 -DPVK-------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -CCCC-------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1111 11256678999999999999999999999875
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-46 Score=313.71 Aligned_cols=236 Identities=19% Similarity=0.156 Sum_probs=200.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|+....| |.|+||.|.+++. .++.-+|+|.+.+..- ...+...+|..+|+.++||.++++++.|.+.+.+++|
T Consensus 44 ~dfe~~~tl-GtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTL-GTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeee-ccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 467777888 9999999999999 5566889999876532 3445677999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||++||.|..++++. ++++...+..++.+|+.||+||| +.+|++|||||+|||+|++|.+||+|||+|+..
T Consensus 123 meyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EeccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999775 68999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
... +.+.||||.|+|||+++...|+.++|.|||||++|||+.|.+||....+ .....+.+.. ...
T Consensus 195 ~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---------~~iY~KI~~~-~v~ 259 (355)
T KOG0616|consen 195 SGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---------IQIYEKILEG-KVK 259 (355)
T ss_pred cCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---------HHHHHHHHhC-ccc
Confidence 442 4567799999999999999999999999999999999999999986543 1112222221 111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCC
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDR 332 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 332 (350)
- |..++.++.+|+...|+.|-.+|
T Consensus 260 --f-----------P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 260 --F-----------PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --C-----------CcccCHHHHHHHHHHHhhhhHhh
Confidence 0 12455678999999999999888
No 27
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=9.9e-45 Score=328.13 Aligned_cols=266 Identities=19% Similarity=0.253 Sum_probs=203.6
Q ss_pred cCcccccccccCCCceEEEEEEECC-----------------CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-----------------RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILK 121 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-----------------~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 121 (350)
++|...+.| |+|+||.||++.+++ +..||+|.+.... ......+.+|+.++.+++||||++
T Consensus 5 ~~~~~~~~l-g~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKL-GEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEe-cccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 567778888 999999999998632 2269999987643 334567899999999999999999
Q ss_pred eeeeeecCCcCeEEeecCCCCchhhhhhCCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeE
Q 018816 122 LIGCCLEAEMPALVYEPAGYCTLADRLYGPLQ--------------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVV 187 (350)
Q Consensus 122 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 187 (350)
+++++.+.+..++||||+++++|.+++..... .....+++.....++.||+.||.||| +.+|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence 99999999999999999999999998854211 01134788899999999999999999 99999
Q ss_pred eeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh--CCC
Q 018816 188 FRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT--GRT 265 (350)
Q Consensus 188 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~ 265 (350)
|+||||+|||++.++.+||+|||++................++..|+|||++.++.++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999976644333222333446789999999988899999999999999999987 455
Q ss_pred CCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 266 IGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
||..... ..................... .. ..++..+.+|+.+||+.||++|||+.+|.+.|++
T Consensus 241 p~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTD------EQVIENAGEFFRDQGRQVYLF----RP-----PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCH------HHHHHHHHHHhhhcccccccc----CC-----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 6653321 111222222222111111000 00 1345678999999999999999999999988863
No 28
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-46 Score=364.65 Aligned_cols=262 Identities=23% Similarity=0.341 Sum_probs=215.2
Q ss_pred CcccccccccCCCceEEEEEEE--CCCc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL--RDRG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~--~~~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
+......| |+|+||.||.|.. .++. .||+|.+.... .....+|.+|..+|+.++|||||+++|+|.+....+
T Consensus 693 ~v~l~~~l-G~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 693 NVTLLRVL-GKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred heEeeeee-ccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 33445667 9999999999998 2332 39999997764 456778999999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQT--HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
|++|||++|+|..+|++.... ....++..+.+.++.|||+|+.||+ .+++|||||..+|+||+....|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999875221 1257999999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
|+.+.............-+..|||||.+..+.||.++|||||||++||++| |..||...+. ..+...+.
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n----------~~v~~~~~ 918 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN----------FEVLLDVL 918 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch----------HHHHHHHH
Confidence 996655544433333235678999999999999999999999999999999 8888875432 12222222
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
.++ .+++ +..+++.+.+++.+||+.+|++||++..|++++..+...
T Consensus 919 ~gg--RL~~----------P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 919 EGG--RLDP----------PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred hCC--ccCC----------CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 222 1221 137788999999999999999999999999999988654
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-46 Score=331.35 Aligned_cols=247 Identities=20% Similarity=0.248 Sum_probs=207.7
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.|+....| |+|.||.||+|.+ ..++.||+|.+.-.. ....+++.+|+.+|.+++++||.++|+.+..+..++++|||
T Consensus 14 ~~~~~~~I-grGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELI-GRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccccchhc-cccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45555667 9999999999999 667788999986553 35567899999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
|.||++.+.+... ..+.+..+.-++++++.||.||| ..+.+|||||+.|||+..+|.+||+|||.+......
T Consensus 93 ~~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred hcCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999998654 34578888889999999999999 999999999999999999999999999999877554
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ...+.+||+.|||||++....|+.++||||||++.+||++|.+|+...++.. ... .+ .....
T Consensus 165 ~~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---vlf-------lI----pk~~P 228 (467)
T KOG0201|consen 165 VK--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---VLF-------LI----PKSAP 228 (467)
T ss_pred hh--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---EEE-------ec----cCCCC
Confidence 33 2367779999999999998899999999999999999999999998766521 000 11 11122
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
|.+.+ .+++.+.+|+..||..||+.||||.++++
T Consensus 229 P~L~~--------~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 229 PRLDG--------DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred Ccccc--------ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 22322 45567999999999999999999999987
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=339.74 Aligned_cols=241 Identities=20% Similarity=0.266 Sum_probs=204.2
Q ss_pred ccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 63 SMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
+..+.| |+|+.|-||+|++.+. .||||+++.-. ..+|+-|++|+||||+.+.|+|.....+|||||||+.|
T Consensus 127 sELeWl-GSGaQGAVF~Grl~ne-tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 127 SELEWL-GSGAQGAVFLGRLHNE-TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhh-ccCcccceeeeeccCc-eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 455778 9999999999999887 99999986432 24789999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
-|...|... .+++......|..+||.|+.||| .+.|||||||.-||||+.+..|||+|||-++......
T Consensus 198 qL~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S--- 266 (904)
T KOG4721|consen 198 QLYEVLKAG-----RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS--- 266 (904)
T ss_pred cHHHHHhcc-----CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh---
Confidence 999999765 57889999999999999999999 9999999999999999999999999999998765543
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
.....+||..|||||++.+.+.+.|+|||||||+||||+||..||.+.... .++--.-.
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---------------------AIIwGVGs 325 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---------------------AIIWGVGS 325 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---------------------eeEEeccC
Confidence 244566999999999999999999999999999999999999998754321 01100001
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
.......+..+++-+.-|+.+||+..|..||++.+++..|.=
T Consensus 326 NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 326 NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 111112234778899999999999999999999999998863
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.8e-44 Score=334.22 Aligned_cols=262 Identities=19% Similarity=0.253 Sum_probs=205.0
Q ss_pred hcCcccccccccCCCceEEEEEEE------CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
.++|...+.| |+|+||.||+|++ ..+..||+|.+.... ....+.+.+|+.++..+ +||||++++++|.+.+
T Consensus 34 ~~~~~~~~~L-G~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTL-GAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhhee-cCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 3468888888 9999999999974 334589999986543 23456788999999999 8999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC--------------------------------------------------------
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT-------------------------------------------------------- 154 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~-------------------------------------------------------- 154 (350)
..++||||+++|+|.+++......
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 999999999999999998643210
Q ss_pred --------------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 155 --------------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 155 --------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 0124788899999999999999999 99999999999999999999999999999976644332
Q ss_pred cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
........++..|+|||++.+..++.++|||||||++|||++ |..||..... .....+.+..+.... .+
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~---------~~~~~~~~~~~~~~~-~~ 339 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV---------DSKFYKMIKEGYRML-SP 339 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc---------hHHHHHHHHhCccCC-CC
Confidence 222222335678999999999999999999999999999998 8888764321 111122222221111 11
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
...+.++.+|+.+||+.||++|||+.+|++.|++.
T Consensus 340 -----------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -----------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 02245789999999999999999999999999874
No 32
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.7e-44 Score=320.24 Aligned_cols=264 Identities=18% Similarity=0.248 Sum_probs=211.0
Q ss_pred cCcccccccccCCCceEEEEEEEC------CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++|...+.| |+|+||.||++... ++..+|+|.+..........+.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~l-g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKREL-GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeecccc-CCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 567788888 99999999999852 23468889887665556678999999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCcee
Q 018816 134 LVYEPAGYCTLADRLYGPLQ--------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~--------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~k 205 (350)
+||||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++||||||+||+++.++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 99999999999999864311 11235899999999999999999999 99999999999999999999999
Q ss_pred EcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHH
Q 018816 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 206 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 284 (350)
|+|||.+................+++.|+|||++.+..++.++|+|||||++|+|++ |.+||..... ..
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~----------~~ 230 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----------NE 230 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----------HH
Confidence 999999876543332222223335778999999998889999999999999999998 8888764321 11
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
....+..+...... ...+..+.+|+.+||+.||.+|||+.+|++.|+++...+
T Consensus 231 ~~~~i~~~~~~~~~------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 231 VIECITQGRVLQRP------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHHHcCCcCCCC------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 11222222111110 023457899999999999999999999999999998764
No 33
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.9e-44 Score=321.31 Aligned_cols=250 Identities=16% Similarity=0.189 Sum_probs=200.0
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|...+.| |+|+||.||++.. .++..||+|.+..... .....+.+|+.++++++|+||+.+++++.+++..++|||
T Consensus 2 f~~~~~l-g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVL-GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEE-ecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 6667778 9999999999998 6777999999865422 223457799999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++|+|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++|+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMGN---PGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 9999999988754321 36889999999999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ................ .
T Consensus 155 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~-~ 224 (285)
T cd05631 155 GET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER------VKREEVDRRVKEDQEE-Y 224 (285)
T ss_pred CCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc------hhHHHHHHHhhccccc-C
Confidence 221 22345899999999999999999999999999999999999999754321 1111111111111100 0
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~ 340 (350)
. ...+..+.+|+.+||+.||++||+ +.++++
T Consensus 225 ~------------~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 225 S------------EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred C------------ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0 134567889999999999999997 788876
No 34
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.2e-44 Score=316.38 Aligned_cols=256 Identities=16% Similarity=0.197 Sum_probs=204.1
Q ss_pred hcCcccccccccCCCceEEEEEEEC----CCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR----DRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~----~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.++|...+.| |+|+||.||+|.++ .+..||+|.+..... .....+.+|+.++.+++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~i-g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERIL-GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeee-cccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 3567888888 99999999999872 345889999876532 33467889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++++|||.+.
T Consensus 83 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 9999999999999986532 46899999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
....... .......++..|+|||++.+..++.++|||||||++||+++ |..||..... . .....+...
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---------~-~~~~~~~~~ 224 (266)
T cd05064 156 EDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---------Q-DVIKAVEDG 224 (266)
T ss_pred cccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---------H-HHHHHHHCC
Confidence 5422211 11112235678999999999999999999999999999875 9999864321 1 111122211
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
..... +..++..+.+++.+||+.+|++|||+.+|++.|.++
T Consensus 225 ~~~~~------------~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 FRLPA------------PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCC------------CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11100 014456799999999999999999999999999875
No 35
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.1e-44 Score=318.36 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=207.4
Q ss_pred cCcccccccccCCCceEEEEEEECCC------ceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDR------GPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~------~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
++|...+.| |+|+||.||+|..... ..|++|.+.... ......+.+|+.++.+++||||+++++++.+....
T Consensus 5 ~~~~~~~~l-g~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEEL-GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcc-cCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 466777888 9999999999998332 478999886543 23456788999999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTH-----------LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
+++|||+++++|.+++....... ...+++..++.++.|++.||.||| +.+++|+||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCC
Confidence 99999999999999986532111 145788999999999999999999 9999999999999999999
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcch
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFF 280 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~ 280 (350)
+.++|+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-------- 232 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-------- 232 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 9999999999876544332222333446889999999988899999999999999999998 9999874321
Q ss_pred HHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
......+........ +..++.++.+|+.+||+.||++||++.+|++.|+.+
T Consensus 233 --~~~~~~i~~~~~~~~------------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 233 --QEVIEMIRSRQLLPC------------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --HHHHHHHHcCCcCCC------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 112222222211110 124567899999999999999999999999999863
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-44 Score=335.40 Aligned_cols=263 Identities=19% Similarity=0.280 Sum_probs=206.0
Q ss_pred hcCcccccccccCCCceEEEEEEE------CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
.++|...+.| |+|+||.||+|++ .++..||+|.+.... ....+.+.+|+.+++.+ +|+||++++++|.+.+
T Consensus 37 ~~~~~~~~~L-G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTL-GAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehhee-cCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3578888888 9999999999985 223479999987543 23456688999999999 8999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCC---------------------------------------------------------
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQ--------------------------------------------------------- 153 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~--------------------------------------------------------- 153 (350)
..++||||+++|+|.+++.....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999998853210
Q ss_pred --------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccccc
Q 018816 154 --------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225 (350)
Q Consensus 154 --------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 225 (350)
....++++..++.++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++............
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 00124788899999999999999999 9999999999999999999999999999987654433222222
Q ss_pred ccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 226 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
...++..|+|||++.+..++.++|||||||++|+|++ |+.||...... .......... .....+.
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---------~~~~~~~~~~-~~~~~~~---- 338 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---------SKFYKMVKRG-YQMSRPD---- 338 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc---------HHHHHHHHcc-cCccCCC----
Confidence 3335678999999988899999999999999999997 99998743210 1111122111 1111110
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
..+.++.+++.+||+.||++|||+.+|++.|+++.
T Consensus 339 -------~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 -------FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 22467899999999999999999999999999875
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6e-44 Score=327.16 Aligned_cols=253 Identities=19% Similarity=0.155 Sum_probs=203.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|.....| |+|+||.||+|.+ .++..||+|.+..... .....+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~i-g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQV-GQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEE-eecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 467888888 9999999999999 4567999999875422 2345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~ 151 (333)
T cd05600 80 MEYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGI 151 (333)
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence 9999999999998653 46889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.. ......||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+......
T Consensus 152 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----------~~~~~~i~~~~~~ 216 (333)
T cd05600 152 VT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP----------NETWENLKYWKET 216 (333)
T ss_pred cc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH----------HHHHHHHHhcccc
Confidence 43 22344589999999999988999999999999999999999999874322 0111111111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+...... ...+.++.+|+.+||..+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~-----~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 217 LQRPVYDDPR-----FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCCCCCccc-----cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1111111000 1345678999999999999999999999864
No 38
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-43 Score=322.15 Aligned_cols=258 Identities=17% Similarity=0.285 Sum_probs=205.0
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.+|+..+.| |+|+||.||+|++. ++. .||+|.+.... .....++.+|+.+++.++||||++++++|... ..+
T Consensus 7 ~~f~~~~~l-g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeee-ecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 568888888 99999999999973 332 38999986543 34456788999999999999999999998765 578
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+++||+++|+|.+++.... ..+++...+.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 85 ~v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccc
Confidence 9999999999999987542 45889999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~----------~~~~~~~~~~ 227 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----------SEISSILEKG 227 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHhCC
Confidence 7654333222222334678999999999999999999999999999998 9999864321 1112222221
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
......+ .++..+.+++.+||+.+|++|||+.+++..|.++.+.
T Consensus 228 ~~~~~~~------------~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 228 ERLPQPP------------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CCCCCCC------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 1111111 2345688999999999999999999999999988654
No 39
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.2e-44 Score=321.44 Aligned_cols=245 Identities=18% Similarity=0.127 Sum_probs=200.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTV-GTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeee-ecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 367788888 9999999999999 4677899999865321 2345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~ 151 (291)
T cd05612 80 MEYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL 151 (291)
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence 9999999999998654 46889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
... .....||+.|+|||++.+..++.++|||||||++|+|++|..||..... .. ....+......
T Consensus 152 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------~~-~~~~i~~~~~~ 216 (291)
T cd05612 152 RDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---------FG-IYEKILAGKLE 216 (291)
T ss_pred cCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HH-HHHHHHhCCcC
Confidence 332 1234589999999999988899999999999999999999999874321 11 11111111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAKK 341 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~~ 341 (350)
+. ...+..+.+|+.+||+.||.+||+ +.++++.
T Consensus 217 -~~------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 217 -FP------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -CC------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00 123457889999999999999995 8887753
No 40
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.8e-43 Score=316.69 Aligned_cols=264 Identities=17% Similarity=0.234 Sum_probs=210.7
Q ss_pred cCcccccccccCCCceEEEEEEEC------CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.+|...+.| |+|+||.||+|... ++..+++|.+........+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKREL-GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeee-cccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 456777788 99999999999862 33468888887665555677899999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY 202 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~ 202 (350)
+||||+++++|.+++..... .....+++..++.++.||+.||.||| +++++|+||||+||+++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 99999999999999864321 11135889999999999999999999 99999999999999999999
Q ss_pred ceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 018816 203 AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFI 281 (350)
Q Consensus 203 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~ 281 (350)
.++|+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------- 231 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--------- 231 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------
Confidence 999999999976644332222333446788999999998899999999999999999998 9999864322
Q ss_pred HHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
................ ...+..+.+++.+||+.+|++|||+.+|++.|+++...+
T Consensus 232 -~~~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 232 -TEVIECITQGRVLERP------------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred -HHHHHHHhCCCCCCCC------------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 1111222221111100 133467899999999999999999999999999997654
No 41
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-44 Score=332.63 Aligned_cols=247 Identities=19% Similarity=0.201 Sum_probs=209.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
+-|.....| |.|+.|.|-+|++ .+|+.+|||.+.+... .....+.+|+.+|+-+.|||+++++++|++..++|+|
T Consensus 12 GpwkLgkTL-G~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTL-GKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccc-cCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 345566778 9999999999999 7888899999876522 2345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
.||+++|.|++++... +++++.++.+++.||+.|+.|+| ..+||||||||+|+|||.++++||+|||+|..-
T Consensus 91 lEyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLE 162 (786)
T ss_pred EEecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecc
Confidence 9999999999999765 78999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCccccccccccCCCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..+.. ..+.||+|.|.|||++.+.+|. .++||||.|||||.|++|+.||++... ..+...+..+.+
T Consensus 163 ~~gkl---LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi----------r~LLlKV~~G~f 229 (786)
T KOG0588|consen 163 VPGKL---LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI----------RVLLLKVQRGVF 229 (786)
T ss_pred cCCcc---ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH----------HHHHHHHHcCcc
Confidence 54443 4566799999999999999875 899999999999999999999985431 112222333333
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
... ...+.++.+|+.+||..||+.|.|++||++.
T Consensus 230 ~MP-------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 EMP-------------SNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCC-------------CcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 322 1456788999999999999999999999874
No 42
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2e-43 Score=315.58 Aligned_cols=259 Identities=18% Similarity=0.290 Sum_probs=206.2
Q ss_pred cCcccccccccCCCceEEEEEEECC------CceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
++|...+.| |+|+||.||+|...+ ...||+|.+...... ..+.+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~l-g~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKREL-GEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhc-cccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 457777788 999999999998733 358999998765433 457899999999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 133 ALVYEPAGYCTLADRLYGPL---------QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
++||||+++++|.+++.... ......+++..+..++.|++.|+.||| +.+++|+||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 99999999999999986431 111245789999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 282 (350)
++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---------- 230 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---------- 230 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH----------
Confidence 99999999876543322222223336788999999999999999999999999999998 9999864322
Q ss_pred HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
......+..+...... ...+..+.+++.+||+.||++|||+.||++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 231 EEVIECITQGRLLQRP------------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHHcCCcCCCC------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111122211111111 1344678999999999999999999999999863
No 43
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.4e-43 Score=311.49 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=205.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.+|...+.| |+|++|.||+|.+ +.+..|++|.+.... .....+.+|+.++++++||||+++++++...+..+++|||
T Consensus 6 ~~~~~~~~i-g~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeec-CCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 457777888 9999999999999 556689999876543 3456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..++.++.|++.||.||| +.+++|+||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 84 MTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred CCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 999999999865321 46889999999999999999999 999999999999999999999999999998776443
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ............
T Consensus 158 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----------~~~~~~~~~~~~--- 223 (263)
T cd05052 158 TYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------SQVYELLEKGYR--- 223 (263)
T ss_pred eee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHHCCCC---
Confidence 221 1112224668999999998899999999999999999998 8888763221 111122221111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
+.. +...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 224 -~~~--------~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 -MER--------PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCC--------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000 013456799999999999999999999999999876
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.3e-44 Score=324.81 Aligned_cols=240 Identities=16% Similarity=0.123 Sum_probs=195.5
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++.+++||||+++++++.+.+..++||||++++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 2 LL-GKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 45 9999999999998 567789999987542 233456778999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-- 150 (323)
T cd05571 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-- 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--
Confidence 999988653 56899999999999999999999 99999999999999999999999999999875422211
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||..... ............. +.
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----------~~~~~~~~~~~~~-~p---- 215 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----------EKLFELILMEEIR-FP---- 215 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH----------HHHHHHHHcCCCC-CC----
Confidence 22344599999999999988999999999999999999999999874321 1111111111110 00
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
...+..+.+|+.+||+.||++|| ++.++++
T Consensus 216 --------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 --------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred --------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 13456789999999999999999 7888875
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.6e-43 Score=320.97 Aligned_cols=197 Identities=18% Similarity=0.219 Sum_probs=172.3
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|+||.||++.+ .++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 5 ~~y~~~~~l-g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISEL-GAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEee-cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 678888888 9999999999999 456677888876542 2345678999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQ-PVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++... ..+++..+..++.|++.||.||| +. +|+|+||||+|||++.++.+||+|||++....
T Consensus 84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 84 HMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 99999999998654 46889999999999999999999 65 69999999999999999999999999987653
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHL 269 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 269 (350)
... .....|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 156 ~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 156 DSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 321 2234589999999999988999999999999999999999999964
No 46
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-43 Score=339.31 Aligned_cols=253 Identities=17% Similarity=0.156 Sum_probs=203.4
Q ss_pred CcccccccccCCCceEEEEEEE-CC-CceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RD-RGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~-~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.|...+.| |+|++|.||++.. .+ +..||+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 68 ~y~~~~~l-g~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLV-GRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEE-EeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 37778888 9999999999998 33 557888877555545556778899999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++|+|.+++....... .++++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEH-LPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCHHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999875432111 46889999999999999999999 999999999999999999999999999999876543
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.........+||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ........ .+......
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---------~~~~~~~~-~~~~~~~~ 292 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---------REIMQQVL-YGKYDPFP 292 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHH-hCCCCCCC
Confidence 322223445699999999999998999999999999999999999999864321 11111111 11111100
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+..+.+++.+||+.||++||++.+++.
T Consensus 293 ------------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 293 ------------CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------------ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 133467899999999999999999999875
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.6e-44 Score=325.84 Aligned_cols=245 Identities=16% Similarity=0.149 Sum_probs=200.6
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
.++|...+.| |+|+||.||+|++ .++..||+|.+..... ...+.+.+|+.++.+++||||+++++++.+++..++
T Consensus 17 ~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETL-GTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEE-EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 3678888888 9999999999999 5667899999865421 234568899999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++..
T Consensus 96 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK 167 (329)
T ss_pred EEcCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence 99999999999998653 46889999999999999999999 99999999999999999999999999999986
Q ss_pred CCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......+.....
T Consensus 168 ~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----------~~~~~~i~~~~~ 232 (329)
T PTZ00263 168 VPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----------FRIYEKILAGRL 232 (329)
T ss_pred cCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----------HHHHHHHhcCCc
Confidence 54322 234589999999999998899999999999999999999999874321 011111111111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~ 340 (350)
. + | ...+..+.+|+.+||+.||.+||+ +.+++.
T Consensus 233 ~-~-p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 K-F-P-----------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred C-C-C-----------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 0 1 023356889999999999999997 677764
No 48
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.1e-43 Score=310.45 Aligned_cols=251 Identities=18% Similarity=0.265 Sum_probs=201.8
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|...+.| |+|+||.||++.++++..+|+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 4 ~~~~~~~~l-g~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKEL-GSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEe-cCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 457777788 9999999999999777789999876443 33467889999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++|+|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 82 ENGCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999986532 35889999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||++.+..++.++|+||||+++|+|++ |+.||..... .... ..+..+.. ...
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---------~~~~-~~i~~~~~-~~~ 222 (256)
T cd05114 155 YT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---------YEVV-EMISRGFR-LYR 222 (256)
T ss_pred ee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---------HHHH-HHHHCCCC-CCC
Confidence 21 1122235678999999988889999999999999999999 8888864321 1111 11111111 111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
+. ..+..+.+++.+||+.+|++|||+.++++.|
T Consensus 223 ~~-----------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PK-----------LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CC-----------CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11 2235789999999999999999999999886
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-43 Score=311.38 Aligned_cols=255 Identities=20% Similarity=0.295 Sum_probs=206.2
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|...+.| |+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus 6 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKL-GAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeec-CCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 567888888 9999999999999777789999876543 34567899999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 84 AKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 99999999865322 46888999999999999999999 8999999999999999999999999999998764432
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||++....++.++|||||||++|+|++ |..||..... ......+......
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----------~~~~~~~~~~~~~--- 223 (261)
T cd05072 158 YT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN----------SDVMSALQRGYRM--- 223 (261)
T ss_pred ee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH----------HHHHHHHHcCCCC---
Confidence 21 1122235678999999988889999999999999999998 8998864321 1111112111110
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
+.. ...+..+.+++.+||+.+|++|||++++++.|+++
T Consensus 224 ~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 PRM---------ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCC---------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 100 13346789999999999999999999999999864
No 50
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.1e-44 Score=316.72 Aligned_cols=249 Identities=30% Similarity=0.408 Sum_probs=194.7
Q ss_pred ccccccCCCceEEEEEEEC-----CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 65 RNITIDEIEGYILYMGFLR-----DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~-----~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.+.| |.|.||.||+|.+. .+..|+||.+.... ....+.+.+|+..+++++||||++++|++...+..++||||
T Consensus 4 ~~~i-g~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQI-GEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEE-EEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEE-ccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3456 99999999999996 24489999996543 34478899999999999999999999999988889999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++|+|.+++..... ..+++..+..|+.||+.||.||| +.+++|+||+++||+++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~---~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK---EPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHTCT---TTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccc---ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999976522 56899999999999999999999 899999999999999999999999999999877433
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
..............|+|||.+....++.++||||||+++||+++ |+.|+..... .... ..+.+......
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---------~~~~-~~~~~~~~~~~ 226 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---------EEII-EKLKQGQRLPI 226 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---------HHHH-HHHHTTEETTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------cccc-cccccccccee
Confidence 33333334447788999999999999999999999999999999 6788764321 1122 22222221111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
.+ .++..+.+++.+||+.+|++|||+.+|++.|
T Consensus 227 ~~------------~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 PD------------NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BT------------TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cc------------chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11 3456789999999999999999999999986
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.8e-43 Score=317.08 Aligned_cols=271 Identities=15% Similarity=0.151 Sum_probs=200.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|...+.| |+|+||.||++++ .++..||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVV-GEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEe-cccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 367888888 9999999999999 456689999986542 233466889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++++++..+.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 151 (287)
T cd07848 80 EYVEKNMLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLS 151 (287)
T ss_pred ecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999987776554322 46889999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC------CcchHHHHHHHHHH
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG------SNFFITDRVEKFIR 290 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~ 290 (350)
..... ......|++.|+|||++.+..++.++|+|||||++|||++|++||......... ..............
T Consensus 152 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 152 EGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 33221 122345899999999999888999999999999999999999999754321000 00000000000001
Q ss_pred hcC-CCccCccccCCCCc--cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNG-YMNIDPVIVGDRSC--FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~-~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... .....+........ ......+..+.+|+.+||+.||++|||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 00000110000000 000124567999999999999999999999885
No 52
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=299.67 Aligned_cols=253 Identities=18% Similarity=0.204 Sum_probs=215.8
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--------hhHHHHHHHHHHHHhc-CCCCccceeeee
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--------YASERCFNNIVFASQM-NHKSILKLIGCC 126 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 126 (350)
...+.|...+++ |.|..+.|-++.+ .+++.+|+|++..... .-.+.-.+|+.||+++ .||+|+.+.+++
T Consensus 14 ~fy~~y~pkeil-grgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 14 GFYAKYEPKEIL-GRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hHHhhcChHHHh-cccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 345677888888 9999999999988 6777999999865321 1234456899999999 599999999999
Q ss_pred ecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeE
Q 018816 127 LEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 127 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl 206 (350)
+.+...++|+|.|+.|.|+|++... -.+++.....|+.|+..|+.||| ..+||||||||+|||++++.++||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~i 164 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKI 164 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEE
Confidence 9999999999999999999999765 57899999999999999999999 999999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT------GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~ 280 (350)
+|||+++.+..+.. ....+|||+|+|||.+.. ..|+...|+||+||++|.|+.|.+||--.
T Consensus 165 sDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---------- 231 (411)
T KOG0599|consen 165 SDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---------- 231 (411)
T ss_pred eccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH----------
Confidence 99999999876653 455679999999998853 35889999999999999999999998622
Q ss_pred HHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
-+..+...+..+.+..-.|.+ .+.+....+|+.+||+.||.+|.|++|+|+
T Consensus 232 kQmlMLR~ImeGkyqF~speW---------adis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 232 KQMLMLRMIMEGKYQFRSPEW---------ADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHHHhcccccCCcch---------hhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 233445566667777777766 366778999999999999999999999987
No 53
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-44 Score=294.51 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=209.5
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
.++|+..+.| |+|.||.||.|+. ++.--||+|.+.+..- .-..++.+|++|-+.|+||||++++++|.+....||
T Consensus 21 l~dfeigr~L-gkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPL-GKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccc-cCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3578889999 9999999999999 5666889999877532 234678899999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
++||.+.|++...|+.... ..++......+..|+|.||.|+| .++++||||||+|+|++..+.+|++|||-+..
T Consensus 100 ilEya~~gel~k~L~~~~~---~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM---KRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred EEEecCCchHHHHHHhccc---ccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 9999999999999985432 56888999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
.+. ....+.+||..|++||...+..++...|+|++|++.||++.|.+||..... ...-+-+.+ .
T Consensus 174 ~p~----~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~----------~etYkrI~k--~ 237 (281)
T KOG0580|consen 174 APS----NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH----------SETYKRIRK--V 237 (281)
T ss_pred cCC----CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh----------HHHHHHHHH--c
Confidence 542 235677899999999999999999999999999999999999999985431 111112221 2
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+| ...+..+.++|.+|+..+|.+|.+..+++..
T Consensus 238 ~~~~p-----------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 238 DLKFP-----------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccCC-----------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 22222 1455678999999999999999999999863
No 54
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.2e-43 Score=312.14 Aligned_cols=257 Identities=21% Similarity=0.303 Sum_probs=210.4
Q ss_pred HhcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
...+|...+.| |.|+||.||+|...++..+++|.+..........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~~y~~~~~i-g~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKL-GSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhh-ccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 44677888888 99999999999997788999999877665556788999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||.+.....
T Consensus 83 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 83 LMEKGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred ecccCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 9999999999975432 46899999999999999999999 99999999999999999999999999999977643
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... .....++..|+|||++.+..++.++|+||||+++|+|++ |..||..... ..... ........
T Consensus 157 ~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---------~~~~~-~~~~~~~~- 223 (261)
T cd05148 157 DVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---------HEVYD-QITAGYRM- 223 (261)
T ss_pred cccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---------HHHHH-HHHhCCcC-
Confidence 3221 123336778999999988899999999999999999998 8888864321 11111 11111110
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
..+ ..+++.+.+++.+||+.||++|||+.++++.|+.+
T Consensus 224 ~~~-----------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 PCP-----------AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCC-----------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000 13456789999999999999999999999999864
No 55
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.9e-43 Score=309.56 Aligned_cols=257 Identities=17% Similarity=0.236 Sum_probs=206.6
Q ss_pred hcCcccccccccCCCceEEEEEEECC----CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD----RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~----~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.++|+..+.| |+|+||.||+|.+.. ...||+|.+.... ......+.+|+.++++++||||+++++++.+.+..+
T Consensus 3 ~~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVI-GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEe-cCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 3578888888 999999999999832 3478999886543 234567889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|||++.
T Consensus 82 iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 154 (266)
T cd05033 82 IITEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence 9999999999999986532 46899999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~----------~~~~~~~~~~ 224 (266)
T cd05033 155 RLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN----------QDVIKAVEDG 224 (266)
T ss_pred cccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH----------HHHHHHHHcC
Confidence 7752222212222335678999999998899999999999999999998 9988754321 1111222211
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
... +.. ...+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 225 ~~~---~~~---------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 YRL---PPP---------MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCC---CCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 100 13346789999999999999999999999999876
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-44 Score=314.78 Aligned_cols=246 Identities=22% Similarity=0.237 Sum_probs=210.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
..|...+.| |+|.||.|-++.. ..++.||||.+.++.. ++.-.+.+|++||+.|+||||+.++.+|++.+.+.||
T Consensus 53 HRyE~~etL-GkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETL-GKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHh-cCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 467777788 9999999999998 7888999999987643 3344578999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||..+|.|++++... +.+++.++.++++||++|+.|+| .++++|||||.+|||+|.|+++||+|||++..+
T Consensus 132 MEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 132 MEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhh
Confidence 9999999999999775 68999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCccccccccccCCCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..... ..+.+|++.|.+||.+.+.+|. +..|.|||||+||.|+.|..||+.... ..+...+.++.+
T Consensus 204 ~~~kf---LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----------k~lvrQIs~GaY 270 (668)
T KOG0611|consen 204 ADKKF---LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----------KRLVRQISRGAY 270 (668)
T ss_pred ccccH---HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----------HHHHHHhhcccc
Confidence 65554 4567899999999999998875 889999999999999999999985432 223333443332
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. | ..+....-||++||..||++|.|+.+|...
T Consensus 271 rE--P------------~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 271 RE--P------------ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred cC--C------------CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 11 1 223456789999999999999999999764
No 57
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.7e-43 Score=311.60 Aligned_cols=259 Identities=18% Similarity=0.262 Sum_probs=203.1
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++|...+.| |+|+||.||+|.+. ++. .|++|.+.... .....++..|+..+++++||||+++++++. +...+
T Consensus 7 ~~~~~~~~l-g~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~ 84 (279)
T cd05111 7 TELRKLKLL-GSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ 84 (279)
T ss_pred hhceecccc-CccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence 356667788 99999999999983 333 37777775432 233456778888999999999999999875 45678
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+++||+++|+|.+++.... ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.+||+|||.++
T Consensus 85 ~i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred EEEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccce
Confidence 9999999999999996532 46899999999999999999999 8999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............++..|+|||++.++.++.++|||||||++||+++ |..||..... ......+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----------~~~~~~~~~~ 227 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP----------HEVPDLLEKG 227 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHHCC
Confidence 6644332222233446788999999998899999999999999999998 9999864321 1122223222
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
... ..+. .++..+.+++.+||..+|++|||+.++++.|..+.+.+
T Consensus 228 ~~~-~~~~-----------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 228 ERL-AQPQ-----------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CcC-CCCC-----------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 211 1111 22346788999999999999999999999999987654
No 58
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.8e-43 Score=308.73 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=206.3
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.++|...+.| |+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~l-g~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKL-GAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEe-cccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 4568888888 9999999999999777789999986543 3356788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..+..++.+++.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 83 MKYGSLLEYLQGGAG---RALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ccCCcHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 999999999865421 46899999999999999999999 999999999999999999999999999999876532
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.... ......+..|+|||++.+..++.++|+||||+++|+|++ |+.||..... ......+........
T Consensus 157 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 225 (261)
T cd05068 157 IYEA-REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----------AEVLQQVDQGYRMPC 225 (261)
T ss_pred cccc-cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHHcCCCCCC
Confidence 2111 111123457999999998899999999999999999999 8988864321 111122221111000
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
. ...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~------------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 226 P------------PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred C------------CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0 13446789999999999999999999999999863
No 59
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.8e-43 Score=321.01 Aligned_cols=239 Identities=21% Similarity=0.156 Sum_probs=193.4
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
||+|+||.||++.. .++..||+|.+.... ......+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 49999999999999 556689999986532 23445678899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.++|+|||+++....... ..
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~ 150 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KT 150 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--cc
Confidence 9998653 46899999999999999999999 99999999999999999999999999999875432221 22
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......... .... +.
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---------~~~~~~~~~-~~~~-~~------ 213 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---------NEMYRKILQ-EPLR-FP------ 213 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---------HHHHHHHHc-CCCC-CC------
Confidence 344589999999999998999999999999999999999999874321 111111111 1110 00
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPT---MIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~evl~ 340 (350)
...+..+.+++.+||+.||++||+ +.+++.
T Consensus 214 ------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 214 ------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred ------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 134467899999999999999985 566654
No 60
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.5e-43 Score=330.77 Aligned_cols=264 Identities=18% Similarity=0.274 Sum_probs=207.0
Q ss_pred hcCcccccccccCCCceEEEEEEECC------CceEEEEEecccch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSVR-YASERCFNNIVFASQMN-HKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 130 (350)
.+.|...+.| |+|+||.||+|++.. ...||+|++..... ...+.+.+|+.++.++. ||||++++++|.+..
T Consensus 36 ~~~~~~~~~L-G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRIL-GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhhee-cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4577778888 999999999998721 23699999865432 34567899999999996 999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC--------------------------------------------------------
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT-------------------------------------------------------- 154 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~-------------------------------------------------------- 154 (350)
..++||||+++|+|.+++......
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 999999999999999988643110
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeC
Q 018816 155 -----------------------------------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ 199 (350)
Q Consensus 155 -----------------------------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~ 199 (350)
....+++..+..++.||+.||.||| +.+|+|+||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEe
Confidence 0124788889999999999999999 99999999999999999
Q ss_pred CCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCc
Q 018816 200 EEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSN 278 (350)
Q Consensus 200 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~ 278 (350)
.++.+||+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~------ 345 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV------ 345 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch------
Confidence 999999999999876544332222333346788999999998899999999999999999997 8888764321
Q ss_pred chHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 279 FFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
................ +...+..+.+++.+||+.+|++|||+.+|.+.|+++.+
T Consensus 346 ---~~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 346 ---DSTFYNKIKSGYRMAK------------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---hHHHHHHHhcCCCCCC------------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 0111111111111100 01445679999999999999999999999999998865
No 61
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8.5e-43 Score=306.81 Aligned_cols=248 Identities=21% Similarity=0.280 Sum_probs=196.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
.| |+|+||.||+|++ .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+....++||||+++++|
T Consensus 2 ~l-g~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 2 RI-GRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred cc-CcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 45 9999999999999 567789999876443 34456789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++.... ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||.+............
T Consensus 81 ~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 81 LTFLRTEG----PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 99986432 45889999999999999999999 999999999999999999999999999998765432211111
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVG 303 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (350)
.....+..|+|||.+.++.++.++|+||||+++|+|++ |..||..... ...............
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~----------~~~~~~~~~~~~~~~------ 217 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN----------QQTREAIEQGVRLPC------ 217 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH----------HHHHHHHHcCCCCCC------
Confidence 11123457999999998899999999999999999998 8888753221 111122211111110
Q ss_pred CCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 304 DRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 304 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+...+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus 218 ------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 ------PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 01335678999999999999999999999998863
No 62
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=338.15 Aligned_cols=260 Identities=18% Similarity=0.169 Sum_probs=210.5
Q ss_pred hcCcccccccccCCCceEEEEEEECCC-ceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeee-eec------C
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDR-GPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGC-CLE------A 129 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~-~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~------~ 129 (350)
..+..+.++| .+|||+.||++.+..+ ..+|+|++...+....+.+.+||.+|++|+ |+|||.+++. ... .
T Consensus 36 ~~~v~V~~vL-AEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 36 SHRVTVEKVL-AEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CEEEEEEEEE-ccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3566778888 9999999999999444 899999998877788889999999999997 9999999993 221 1
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEccc
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
-+.+|+||||.||+|-|++..... ..|++.++++|+.++++|+.+||.. ..+|||||||.+||||+.++..|||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 367899999999999999976554 4599999999999999999999965 567999999999999999999999999
Q ss_pred CCCccCCCCCc-ccc------ccccccCCCCCCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcc
Q 018816 210 SLSKSIPEGKT-HIK------ASTAIGSLEFAAPEYL---TTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279 (350)
Q Consensus 210 g~~~~~~~~~~-~~~------~~~~~gt~~y~aPE~~---~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 279 (350)
|.+........ ... .-...-|+.|.|||++ .+...+.|+|||||||+||-|+....||+.....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------ 264 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------ 264 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------
Confidence 99864432221 100 1122368999999976 4567899999999999999999999999865321
Q ss_pred hHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 280 FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
.+ +.+.+........+..+.+||..||+.||++||++-+|+..+.+|...
T Consensus 265 ---------------aI----lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 265 ---------------AI----LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ---------------eE----EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 11 112222112136788999999999999999999999999999988654
No 63
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-44 Score=310.01 Aligned_cols=268 Identities=16% Similarity=0.190 Sum_probs=207.5
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEec--ccchhhHHHHHHHHHHHHhcCCCCccceeeeeec-----
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYR--KSVRYASERCFNNIVFASQMNHKSILKLIGCCLE----- 128 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----- 128 (350)
.....|...+.| |+|+||.|..+.+ .++..||||++. -......++..+|+++|+.++|+||+.+++.+..
T Consensus 19 ~i~~~y~~~~~i-G~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 19 EIPRYYVLIEPI-GRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eccceecccccc-cCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344556656677 9999999999999 677899999997 3445667889999999999999999999998865
Q ss_pred CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 129 AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 129 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
-+..|+|+|+| ..+|...+... ..++......++.|++.||.|+| +.+++||||||.|+|++.+..+||+|
T Consensus 98 f~DvYiV~elM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~D 168 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICD 168 (359)
T ss_pred cceeEEehhHH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecc
Confidence 34789999999 57899988764 45999999999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCc
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSN 278 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~ 278 (350)
||+|+...........+..+.|..|.|||.+.. ..|+.+.||||+|||+.||++|++.|.+..... +...
T Consensus 169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~ 248 (359)
T KOG0660|consen 169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS 248 (359)
T ss_pred ccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence 999998754322222455668999999998865 469999999999999999999999998654320 0000
Q ss_pred ch-----HHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 279 FF-----ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 279 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. ....+++.+.+.....- ..+....+ ...+...+|+.+||..||.+|+|++|.++
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~-----~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPK-----QPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCC-----CCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 11123333333221100 00111111 34467889999999999999999999886
No 64
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.2e-42 Score=312.26 Aligned_cols=263 Identities=23% Similarity=0.312 Sum_probs=206.3
Q ss_pred CcccccccccCCCceEEEEEEEC------CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
+|...+.| |+|+||.||+|+.. ....+++|.+.... ......+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTL-GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred Cccccccc-cCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 35667778 99999999999872 22367777776543 233467889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccC
Q 018816 134 LVYEPAGYCTLADRLYGPLQ-------------------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPW 194 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~-------------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~ 194 (350)
+++||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++|+||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhh
Confidence 99999999999998864211 01135889999999999999999999 999999999999
Q ss_pred ceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccc
Q 018816 195 NILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLA 273 (350)
Q Consensus 195 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~ 273 (350)
||++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++++|++ |..||....+
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 99999999999999999876543332222233335778999999988889999999999999999998 9988864321
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
..+............ + ...+..+.+++.+||+.+|++||++.++++.|+++...+
T Consensus 236 ---------~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~~ 290 (290)
T cd05045 236 ---------ERLFNLLKTGYRMER-P-----------ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVKS 290 (290)
T ss_pred ---------HHHHHHHhCCCCCCC-C-----------CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhcC
Confidence 122222222111100 0 134467899999999999999999999999999998754
No 65
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.2e-43 Score=336.28 Aligned_cols=262 Identities=19% Similarity=0.176 Sum_probs=208.1
Q ss_pred HHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecC
Q 018816 53 EDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEA 129 (350)
Q Consensus 53 ~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 129 (350)
.+.....++|...+.| |+|+||+||++.. .++..||+|.+... .......+.+|+.++..++|+||+++.+.+...
T Consensus 25 ~~~~~~~~rY~i~~~L-G~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 25 ATAKEQAKKYWISRVL-GSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred ccccccCCCEEEEEEE-ecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 4455566899999998 9999999999998 66779999998654 234456788999999999999999998876543
Q ss_pred C--------cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 130 E--------MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 130 ~--------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
. ..++||||+++|+|.+++...... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.+
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSN 179 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCC
Confidence 2 367999999999999998653221 246899999999999999999999 9999999999999999999
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchH
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFI 281 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~ 281 (350)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------- 250 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------- 250 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---------
Confidence 99999999999876543322233455699999999999999999999999999999999999999874321
Q ss_pred HHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+.... ......+. ...++.+.+++.+||+.||++||++.+++..
T Consensus 251 ~~~~~~~~-~~~~~~~~------------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 251 EEVMHKTL-AGRYDPLP------------PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHHh-cCCCCCCC------------CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111111 11111111 1345679999999999999999999999863
No 66
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-44 Score=326.26 Aligned_cols=251 Identities=21% Similarity=0.215 Sum_probs=211.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc-CeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM-PALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv 135 (350)
++|...+.+ |+|+||.+++.++ .+...+++|++.-.. ....+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 4 ~~Ye~~~~i-G~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQV-GRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhc-CccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 456677778 9999999999999 566699999986543 3445568899999999999999999999999888 9999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|+||+||++.+.+..... ..+++..+..|+.|++.|+.||| .++|+|||||+.||+++.++.|+|+|||+|+..
T Consensus 83 m~Y~eGg~l~~~i~~~k~---~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKG---VLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EeecCCCCHHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 999999999999976542 56899999999999999999999 999999999999999999999999999999998
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.+... ...+.+||+.|++||.+.+.+|+.++|||||||++|||++-+++|..... ...+.+... .
T Consensus 157 ~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---------~~Li~ki~~----~ 221 (426)
T KOG0589|consen 157 NPEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---------SELILKINR----G 221 (426)
T ss_pred CCchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---------HHHHHHHhh----c
Confidence 76542 34566799999999999999999999999999999999999999985432 111222211 1
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
..+|.. ...+.++..++..||+.+|+.||++.+++..
T Consensus 222 ~~~Plp---------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 LYSPLP---------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cCCCCC---------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 122221 2556789999999999999999999999975
No 67
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.4e-43 Score=320.01 Aligned_cols=240 Identities=17% Similarity=0.123 Sum_probs=194.5
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 2 LL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred ee-eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 45 9999999999998 567799999987642 233456778999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|..++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-- 150 (323)
T cd05595 81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-- 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--
Confidence 999888653 46899999999999999999999 99999999999999999999999999999875322211
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... .. ........... +.
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---------~~-~~~~~~~~~~~-~p---- 215 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ER-LFELILMEEIR-FP---- 215 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---------HH-HHHHHhcCCCC-CC----
Confidence 12334589999999999988999999999999999999999999874321 01 11111111110 00
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
...++.+.+++.+||+.||++|| ++.++++
T Consensus 216 --------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 --------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred --------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 13446788999999999999998 8888875
No 68
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.2e-43 Score=311.35 Aligned_cols=261 Identities=18% Similarity=0.301 Sum_probs=204.5
Q ss_pred HhcCcccccccccCCCceEEEEEEEC------CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
.+++|+..+.| |+|+||.||+|.+. .+..||+|++.... .....++.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~i-g~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSREL-GQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeee-ccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 46788999998 99999999999863 23479999886432 234456889999999999999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCcee
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT-----HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~k 205 (350)
..++||||+++++|.+++...... ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEE
Confidence 999999999999999998642110 0134678889999999999999999 89999999999999999999999
Q ss_pred EcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHH
Q 018816 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 206 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 284 (350)
|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----------~~ 229 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----------EQ 229 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----------HH
Confidence 999999876544333222223346788999999998889999999999999999999 6788764321 11
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
.............. ...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 230 ~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 230 VLRFVMEGGLLDKP------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHHcCCcCCCC------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11122221111110 1334678999999999999999999999998863
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.3e-43 Score=322.68 Aligned_cols=245 Identities=18% Similarity=0.171 Sum_probs=200.0
Q ss_pred hcCcccccccccCCCceEEEEEEECC--CceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD--RGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~--~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.++|.....| |+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|+.++..++||||+++++++.+.+..+
T Consensus 29 ~~~y~~~~~i-g~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTL-GTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEE-eecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 4578888888 999999999998733 3579999986542 233456889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.
T Consensus 108 lv~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 999999999999998654 46889999999999999999999 9999999999999999999999999999997
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... . .....+....
T Consensus 180 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~----~~~~~i~~~~ 244 (340)
T PTZ00426 180 VVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP------L----LIYQKILEGI 244 (340)
T ss_pred ecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH------H----HHHHHHhcCC
Confidence 65432 2234589999999999988899999999999999999999999975322 0 1111111111
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
. .+.+ ..+..+.+++.+||+.||++|+ +++++++
T Consensus 245 ~-~~p~------------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 245 I-YFPK------------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred C-CCCC------------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1 1111 2345688999999999999995 8888876
No 70
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.4e-42 Score=307.27 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=198.7
Q ss_pred ccccccccCCCceEEEEEEECCCc---eEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecC------Cc
Q 018816 63 SMRNITIDEIEGYILYMGFLRDRG---PILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEA------EM 131 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~~~---~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 131 (350)
.....| |+|+||.||+|.+.++. .||+|.+... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~i~~~i-g~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTL-GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred cccccc-CcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 345667 99999999999984433 5888887543 234456788999999999999999999987532 25
Q ss_pred CeEEeecCCCCchhhhhhCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 132 PALVYEPAGYCTLADRLYGPL-QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
.+++|||+++|+|.+++.... ......+++.....++.|++.||.||| +++|+||||||+|||++.++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999998874321 112245889999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
++................+++.|+|||+..+..++.++||||||+++|||++ |..||..... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----------~~~~~~~ 227 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----------SEIYDYL 227 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHH
Confidence 9987654332222223336778999999998889999999999999999999 7888764221 1122222
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
..+...... ...+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 228 ~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 RQGNRLKQP------------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HcCCCCCCC------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222111111 13345689999999999999999999999999875
No 71
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.1e-43 Score=314.56 Aligned_cols=264 Identities=15% Similarity=0.156 Sum_probs=197.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |.|+||.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 5 ~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKL-GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEE-ecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 568888888 9999999999998 5667899998864432 234567799999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ ++|.+++.... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++.....
T Consensus 84 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 84 YLD-SDLKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred CCC-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 997 48988885432 35789999999999999999999 99999999999999999999999999999876533
Q ss_pred CCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC---
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG--- 293 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (350)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|++||...... ..............
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 227 (288)
T cd07871 156 PTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK------EELHLIFRLLGTPTEET 227 (288)
T ss_pred CCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCChHH
Confidence 221 1223357999999998875 46899999999999999999999998754321 11111111100000
Q ss_pred ----------CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 ----------YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+..............+.++.+|+.+||+.||.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 228 WPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00001110000000000023457889999999999999999999985
No 72
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.3e-43 Score=321.72 Aligned_cols=264 Identities=18% Similarity=0.314 Sum_probs=205.6
Q ss_pred cCcccccccccCCCceEEEEEEEC------CCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecC-C
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEA-E 130 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 130 (350)
++|...+.| |+|+||.||+|... .++.||+|++.... ....+.+.+|+.++.++ +|+||++++++|... .
T Consensus 7 ~~~~i~~~l-G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPL-GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhccc-ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 467788888 99999999999752 23579999986542 23345678899999999 799999999988654 5
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC--------------------------------------------------------
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT-------------------------------------------------------- 154 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~-------------------------------------------------------- 154 (350)
..+++|||+++++|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 788999999999999988542110
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCC
Q 018816 155 HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA 234 (350)
Q Consensus 155 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~ 234 (350)
....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++................++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 0126889999999999999999999 9999999999999999999999999999998764433222233444678899
Q ss_pred CccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHH
Q 018816 235 APEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEK 313 (350)
Q Consensus 235 aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (350)
|||++.+..++.++|||||||++|||++ |..||..... ................ + ...
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~---------~~~~~~~~~~~~~~~~-~-----------~~~ 301 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI---------DEEFCRRLKEGTRMRA-P-----------EYA 301 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc---------cHHHHHHHhccCCCCC-C-----------ccC
Confidence 9999999999999999999999999998 9999864221 0111122222111111 0 133
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 314 LQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 314 ~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
+.++.+++.+||+.+|++||++.+|++.|+++.+.
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999998765
No 73
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-42 Score=307.16 Aligned_cols=252 Identities=15% Similarity=0.265 Sum_probs=202.1
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|.....| |+|++|.||+|...++..+|+|.+.... ...+.+.+|+.++.+++||||+++++++.+.+..++||||+
T Consensus 4 ~~~~~~~~l-g~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKEL-GTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEe-cCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 456677778 9999999999998777689999886543 33467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.... ..+++..++.++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||.++......
T Consensus 82 ~~~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 82 SNGCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999986532 36889999999999999999999 9999999999999999999999999999987654332
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....++..|+|||++.+..++.++|||||||++|+|++ |..||..... .. ............ .
T Consensus 155 ~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---------~~-~~~~~~~~~~~~-~ 222 (256)
T cd05113 155 YTS-SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---------SE-TVEKVSQGLRLY-R 222 (256)
T ss_pred eee-cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---------HH-HHHHHhcCCCCC-C
Confidence 211 112225678999999988889999999999999999998 8988764321 11 111222111110 0
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
+ ...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 223 ~-----------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 P-----------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred C-----------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1 023467899999999999999999999998764
No 74
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.8e-42 Score=307.20 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=208.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc---chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS---VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+|+. .++..||+|.+... .......+.+|+.+++.++||||+++++++.+.+..+++
T Consensus 2 ~~~~i~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKI-GRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeee-ccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 578888888 9999999999998 56779999987542 223445688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+||+++++|.+++...... ...++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEecCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 9999999999888532111 145788999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .... ....+......
T Consensus 157 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-------~~~~-~~~~~~~~~~~ 226 (267)
T cd08228 157 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLFS-LCQKIEQCDYP 226 (267)
T ss_pred cchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-------cHHH-HHHHHhcCCCC
Confidence 43321 12233488899999999888899999999999999999999999864321 1111 11112111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
+. .....+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 227 ---~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 ---PL--------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---CC--------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 10 11245577999999999999999999999999999874
No 75
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7e-43 Score=319.27 Aligned_cols=241 Identities=15% Similarity=0.119 Sum_probs=195.4
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||||++++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 2 LL-GKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred ee-eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 45 9999999999998 567799999987542 233456789999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 150 (328)
T cd05593 81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-- 150 (328)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc--
Confidence 999888653 46899999999999999999999 99999999999999999999999999999875432211
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .. ....+..... .+.
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---------~~-~~~~~~~~~~-~~p---- 215 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EK-LFELILMEDI-KFP---- 215 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---------HH-HHHHhccCCc-cCC----
Confidence 12334589999999999988999999999999999999999999874321 01 1111111110 000
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAKK 341 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~~ 341 (350)
...+..+.+|+.+||+.||++|| ++.++++.
T Consensus 216 --------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 --------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 13346788999999999999997 89988763
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-42 Score=317.13 Aligned_cols=198 Identities=17% Similarity=0.214 Sum_probs=171.4
Q ss_pred hcCcccccccccCCCceEEEEEEEC-CCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
.++|+..+.| |+|+||.||++.+. ++..+|+|.+... .....+.+.+|+.++++++||||++++++|.+++..++||
T Consensus 4 ~~~y~~~~~l-g~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISEL-GAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccc-cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3678888888 99999999999994 5557777776543 2234567889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQ-PVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||+++++|.+++... ..+++.....++.+++.||.||| +. +++|+||||+|||++.++.+||+|||++...
T Consensus 83 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 83 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 999999999998653 46888999999999999999999 64 7999999999999999999999999998755
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHL 269 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 269 (350)
.... .....|+..|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 155 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 155 IDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred hhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 3221 2234589999999999988899999999999999999999999874
No 77
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.5e-43 Score=325.25 Aligned_cols=252 Identities=16% Similarity=0.128 Sum_probs=199.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+++. .++..||+|.+.... ......+.+|+.++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~l-G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVI-GRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEE-EecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 468888888 9999999999999 567789999987542 23345677899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.++|+|||++...
T Consensus 80 ~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 80 MEYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred ECCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999998653 46899999999999999999999 999999999999999999999999999998754
Q ss_pred CCCCccc------------------------------------cccccccCCCCCCccccccCCCCccchhHHHHHHHHH
Q 018816 216 PEGKTHI------------------------------------KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLV 259 (350)
Q Consensus 216 ~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 259 (350)
....... .....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence 3211000 0112358999999999998899999999999999999
Q ss_pred HHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC---HH
Q 018816 260 LLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT---MI 336 (350)
Q Consensus 260 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~ 336 (350)
|++|..||..... ......... .......+. . ...++.+.+|+.+|+. +|.+|++ +.
T Consensus 232 l~~G~~Pf~~~~~---------~~~~~~i~~-~~~~~~~~~---~------~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 232 MLVGYPPFCSDNP---------QETYRKIIN-WKETLQFPD---E------VPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred hhcCCCCCCCCCH---------HHHHHHHHc-CCCccCCCC---C------CCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 9999999975432 111111111 111110010 0 0234578899999997 8999998 88
Q ss_pred HHHH
Q 018816 337 DVAK 340 (350)
Q Consensus 337 evl~ 340 (350)
+++.
T Consensus 292 ~ll~ 295 (364)
T cd05599 292 EIKS 295 (364)
T ss_pred HHhc
Confidence 8876
No 78
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.7e-42 Score=308.33 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=204.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++|...+.| |+|+||+||+|.+ .++. .||+|.+.... ......+.+|+.++..++||||+.+++++.. ...+
T Consensus 7 ~~~~~~~~l-g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 7 TELKKVKVL-GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hheeeeeec-CCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 567777888 9999999999997 3443 37899886543 3445678899999999999999999999875 4578
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+++||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+++|+||||+|||+++++.+||+|||+++
T Consensus 85 l~~~~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 9999999999999986532 46899999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............+++.|+|||...+..++.++|||||||++|||++ |..||..... ......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~~~~~ 227 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----------REIPDLLEKG 227 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHHCC
Confidence 7643322211222235678999999988899999999999999999998 8888764321 1112222222
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
...... ...+..+.+++.+||+.||+.||++.++++.|+++...+
T Consensus 228 ~~~~~~------------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 228 ERLPQP------------PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CcCCCC------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111111 133467899999999999999999999999999886543
No 79
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-45 Score=341.59 Aligned_cols=274 Identities=17% Similarity=0.238 Sum_probs=223.0
Q ss_pred CCcccccHHHHHHHhcCc---------ccccccccCCCceEEEEEEEC----CCceEEEEEecccc-hhhHHHHHHHHHH
Q 018816 45 NPIRSFSSEDLKTAINNY---------SMRNITIDEIEGYILYMGFLR----DRGPILVMKYRKSV-RYASERCFNNIVF 110 (350)
Q Consensus 45 ~~~~~~~~~~l~~~~~~f---------~~~~~lig~G~~g~V~~~~~~----~~~~vaik~~~~~~-~~~~~~~~~E~~~ 110 (350)
.-+.+++++|--.+...| .++++| |.|.||+|++|+++ ....||||.++... ...+.+|..|+.|
T Consensus 605 ~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VI-GaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsI 683 (996)
T KOG0196|consen 605 TYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVI-GAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASI 683 (996)
T ss_pred eecCCccccCccHHHHHhhhhcChhheEEEEEE-ecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhh
Confidence 334567777654444333 455666 99999999999992 33489999998764 4567789999999
Q ss_pred HHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeec
Q 018816 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRN 190 (350)
Q Consensus 111 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 190 (350)
|.+++||||+++-|+.......+||+|||++|+|..+|+... +.+++.+...++++||.|+.||- +.++||||
T Consensus 684 MGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLs---dm~YVHRD 756 (996)
T KOG0196|consen 684 MGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRD 756 (996)
T ss_pred cccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHh---hcCchhhh
Confidence 999999999999999999999999999999999999997654 56999999999999999999999 99999999
Q ss_pred cccCceEeCCCCceeEcccCCCccCCCCCccccccccc--cCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCC
Q 018816 191 IEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAI--GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIG 267 (350)
Q Consensus 191 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~ 267 (350)
|..+|||++.+..+|++|||+++.+..+.. ...++.. -+.+|.|||.+...+||.+|||||||++|||.++ |..||
T Consensus 757 LAARNILVNsnLvCKVsDFGLSRvledd~~-~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 757 LAARNILVNSNLVCKVSDFGLSRVLEDDPE-AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred hhhhheeeccceEEEeccccceeecccCCC-ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 999999999999999999999997754431 1122221 2578999999999999999999999999999887 88886
Q ss_pred CCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 268 HLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
=+... ..+.+.++.+- ..+.+.+++..+.+|+..||+.|-++||++.+|+..|.++.+
T Consensus 836 WdmSN----------QdVIkaIe~gy------------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 836 WDMSN----------QDVIKAIEQGY------------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred cccch----------HHHHHHHHhcc------------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 54321 12233333221 111224889999999999999999999999999999999987
Q ss_pred cC
Q 018816 348 TS 349 (350)
Q Consensus 348 ~~ 349 (350)
.+
T Consensus 894 nP 895 (996)
T KOG0196|consen 894 NP 895 (996)
T ss_pred Cc
Confidence 64
No 80
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-42 Score=312.63 Aligned_cols=264 Identities=20% Similarity=0.260 Sum_probs=207.8
Q ss_pred HHhcCcccccccccCCCceEEEEEEECC------CceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeec
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLE 128 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 128 (350)
...++|+..+.| |+|+||.||++...+ ...+|+|.+.... .....++.+|+.++.++ +|+||+++++++.+
T Consensus 9 ~~~~~~~~~~~i-g~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 9 LPRDRLTLGKPL-GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred cCHhHeEEeeEe-cccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 345678888888 999999999999732 2478888886532 23345688999999999 79999999999999
Q ss_pred CCcCeEEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceE
Q 018816 129 AEMPALVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197 (350)
Q Consensus 129 ~~~~~lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nil 197 (350)
++..+++|||+++++|.+++..... .....+++..++.++.|++.||.||| +.+|+|+||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEE
Confidence 9999999999999999999864210 12256899999999999999999999 999999999999999
Q ss_pred eCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCC
Q 018816 198 FQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGG 276 (350)
Q Consensus 198 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~ 276 (350)
++.++.+||+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 240 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---- 240 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----
Confidence 99999999999999987654332222222335678999999988889999999999999999998 8888764321
Q ss_pred CcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 277 SNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
....+........... ...+..+.+|+.+||+.+|++|||+.++++.|+++.
T Consensus 241 ------~~~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 ------EELFKLLKEGYRMEKP------------QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ------HHHHHHHHcCCcCCCC------------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1112222221111000 133467889999999999999999999999999875
No 81
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=329.02 Aligned_cols=243 Identities=18% Similarity=0.188 Sum_probs=203.5
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 132 (350)
.-++|....+| |+|.||.|+++.. .++..+|||.+.+.. .++.+..+.|-.|+... +||.++.++.+|++.+++
T Consensus 366 ~l~~F~~l~vL-GkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVL-GRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEe-ccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34788999999 9999999999999 555688999988764 35567788898888877 599999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
++||||+.||++..+++. ..+++..+..++..|+.||.||| +++|||||||.+|||||.+|++||+|||++
T Consensus 445 ~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred EEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccc
Confidence 999999999996665543 57999999999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
+..... ...+.+.+|||.|+|||++.+..|+.++|+|||||++|||+.|..||......
T Consensus 516 Ke~m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe------------------- 574 (694)
T KOG0694|consen 516 KEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE------------------- 574 (694)
T ss_pred cccCCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-------------------
Confidence 875422 23577889999999999999999999999999999999999999999854321
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
+.+|..+..+... +.-++.+..+++.++|..+|++|.-+
T Consensus 575 --e~FdsI~~d~~~y--P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 --EVFDSIVNDEVRY--PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --HHHHHHhcCCCCC--CCcccHHHHHHHHHHhccCcccccCC
Confidence 1111111111111 12566789999999999999999755
No 82
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-42 Score=323.27 Aligned_cols=262 Identities=16% Similarity=0.126 Sum_probs=197.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|...+.| |+|+||.||++.+ ..+..||+|... ...+.+|+.++++++||||+++++++......++|+|+
T Consensus 92 ~~y~~~~~l-g~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETF-TPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEE-cCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 579999998 9999999999999 666788998643 23467899999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+. ++|..++... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 165 YK-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred CC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 95 7888887543 46889999999999999999999 999999999999999999999999999998754322
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCc--chHHHH------------
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSN--FFITDR------------ 284 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~--~~~~~~------------ 284 (350)
.. .......||+.|+|||++.+..++.++|||||||++|||++|..|+.......+... ..+...
T Consensus 236 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 NA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred cc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 11 112334599999999999988999999999999999999999988764322111100 000000
Q ss_pred ------HHHHH-HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 285 ------VEKFI-RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 285 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+ .........+... .........+.++.+|+.+||+.||++|||+.|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSR--PLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCC--CCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 0000000000000 000001134668999999999999999999999985
No 83
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=323.76 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=220.1
Q ss_pred HHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 53 EDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 53 ~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
++++-...+....+.| |.|.||.||.|.| +-.-.||||.+..+. ...++|..|+.+|+.+.|||+|+++|+|.....
T Consensus 260 DkWEmeRtdItMkhKL-GGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred chhhccchheeeeecc-CCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 4455555677788899 9999999999999 555589999987654 557899999999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
+|||+|||..|+|.++|..... ..++.-..+.++.||++|+.||. .+++|||||..+|+|+.++..+|++|||+
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr---~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNR---SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred eEEEEecccCccHHHHHHHhch---hhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999987544 45777888999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
++.+....... .....-++.|.|||-+..+.|+.++|||+|||+|||+.| |-.||..... ..+..+++
T Consensus 412 sRlMtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl----------SqVY~LLE 480 (1157)
T KOG4278|consen 412 SRLMTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------SQVYGLLE 480 (1157)
T ss_pred hhhhcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH----------HHHHHHHh
Confidence 99886544322 222224678999999999999999999999999999988 7777764321 12233333
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
++-.. . .++.|++.+.+|+++||+++|++||++.|+-+.|+.|..++
T Consensus 481 kgyRM------~------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 481 KGYRM------D------GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred ccccc------c------CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 32211 1 12367889999999999999999999999999999997654
No 84
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=292.05 Aligned_cols=262 Identities=17% Similarity=0.160 Sum_probs=210.5
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----c
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----M 131 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 131 (350)
..++|.+...| |.|||+-||++.. .+++.+|+|++......+.+..++|++..++++|||++++++++..+. .
T Consensus 19 n~~Ryri~~~L-geGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 19 NNKRYRIQRLL-GEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred cCceEEEeeee-cCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 45688888999 9999999999997 777799999998777778889999999999999999999999976544 5
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEeeccccCceEeCCCCceeEccc
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQP--VVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
.||+++|...|||.+.+....... ..+++.+.+.|+.+|++||.+|| ... ++||||||+|||++..+.++++||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKG-NFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcC-CccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEec
Confidence 899999999999999986543222 46999999999999999999999 555 999999999999999999999999
Q ss_pred CCCccCCCCCc-------cccccccccCCCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcc
Q 018816 210 SLSKSIPEGKT-------HIKASTAIGSLEFAAPEYLTTG---YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279 (350)
Q Consensus 210 g~~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 279 (350)
|.++...-.-. .+.......|..|.|||.+.-. ..+.++|||||||++|+|+.|..||+..
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~--------- 244 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI--------- 244 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------
Confidence 99876532110 0111223478999999988643 4789999999999999999999998732
Q ss_pred hHHHHHHHHHHhcC---CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 280 FITDRVEKFIRSNG---YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 280 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
+..++ .....+.+.-. +....++.+.+++.+||+.||.+||++.+++..++++.
T Consensus 245 ---------~~~GgSlaLAv~n~q~s~P----~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 245 ---------YQQGGSLALAVQNAQISIP----NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------hhcCCeEEEeeeccccccC----CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11221 22222222211 11246788999999999999999999999999998764
No 85
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-42 Score=305.07 Aligned_cols=251 Identities=17% Similarity=0.270 Sum_probs=200.6
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
.+|+..+.| |+|+||.||+|.++++..+|+|.+.... .....+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 4 ~~~~~~~~l-g~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKEL-GSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhh-ccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 346677788 9999999999999777789999886543 23456889999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 82 ANGCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999986532 36889999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... . ......... ....
T Consensus 155 ~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---------~-~~~~~~~~~-~~~~ 222 (256)
T cd05059 155 YTS-SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---------E-VVESVSAGY-RLYR 222 (256)
T ss_pred ccc-cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---------H-HHHHHHcCC-cCCC
Confidence 111 111124567999999998899999999999999999999 78888643221 1 111111111 0000
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
+ ...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 223 ~-----------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 P-----------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred C-----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1 13456799999999999999999999999876
No 86
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-42 Score=308.62 Aligned_cols=259 Identities=18% Similarity=0.255 Sum_probs=203.4
Q ss_pred cCcccccccccCCCceEEEEEEE-----CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-----RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-----~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.+|+..+.| |+|+||.||+|.. ..+..|++|.+.... ......+.+|+.++++++||||+++++++..+...+
T Consensus 5 ~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEEL-GECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeec-cccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 456777888 9999999999985 244589999986533 234467889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQ------------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
+||||+++++|.+++..... .....+++...+.++.|++.||.||| +++++|+||||+||+++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCC
Confidence 99999999999999853210 00135788999999999999999999 9999999999999999999
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcch
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFF 280 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~ 280 (350)
+.+||+|||++................++..|+|||++.+..++.++|+|||||++|||++ |..||.....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-------- 232 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-------- 232 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 9999999999976644332222333346778999999988889999999999999999998 8888764321
Q ss_pred HHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
................ ..++..+.+++.+||+.||++||++.+|++.|+.
T Consensus 233 --~~~~~~~~~~~~~~~~------------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 --QEVIEMVRKRQLLPCS------------EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHHcCCcCCCC------------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111222211111100 1334678999999999999999999999998864
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.4e-43 Score=320.04 Aligned_cols=264 Identities=17% Similarity=0.224 Sum_probs=194.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----cC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----MP 132 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 132 (350)
.|...+.| |+|+||.||+|+. .++..||+|++.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 1 ry~i~~~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVI-GKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEE-eecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 36677788 9999999999998 567799999986432 233456889999999999999999999876432 47
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
++||||++ ++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 80 ~lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 80 YVVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 99999995 6898888643 46899999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCcc-ccccccccCCCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcch
Q 018816 213 KSIPEGKTH-IKASTAIGSLEFAAPEYLTT--GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNFF 280 (350)
Q Consensus 213 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~~ 280 (350)
+........ .......||+.|+|||++.+ ..++.++|||||||++|+|++|++||....... +.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 765322211 11233458999999999876 578999999999999999999999986533210 000000
Q ss_pred HHHHH-----HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 281 ITDRV-----EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 281 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+ ........ ........... ...+..+.+++.+||+.||++|||+.++++
T Consensus 231 ~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 231 TISRVRNEKARRYLSSMR-KKQPVPFSQKF-----PNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHhhhhhHHHHHHhhc-ccCCCchHHhc-----CCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000 00000000000 023456889999999999999999999986
No 88
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2e-42 Score=319.59 Aligned_cols=248 Identities=16% Similarity=0.189 Sum_probs=192.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|+||.||+|.+ .++..||+|.+..... .....+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 74 ~~~~~~~~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRI-GSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhc-cCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 344556677 9999999999998 5677999999865432 345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+. .......+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 153 ~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 153 FMDGGSLEGT---------HIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred cCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 9999998653 23456778899999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
... ......||..|+|||++... ..+.++|||||||++|||++|+.||...... ........ ....
T Consensus 221 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~------~~~~~~~~-~~~~ 291 (353)
T PLN00034 221 TMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG------DWASLMCA-ICMS 291 (353)
T ss_pred ccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc------cHHHHHHH-Hhcc
Confidence 221 12334589999999987532 2456899999999999999999998733211 11111111 1000
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...... ...+.++.+|+.+||+.||++|||+.++++.
T Consensus 292 ~~~~~~------------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 QPPEAP------------ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCC------------CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 1345679999999999999999999999874
No 89
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=321.83 Aligned_cols=261 Identities=18% Similarity=0.237 Sum_probs=214.7
Q ss_pred cccccccCCCceEEEEEEECCCceEEEEEecccchhh-HHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 64 MRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYA-SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 64 ~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
..+.| |+|.||+|.++...+...||+|+++...... .++|..|+++|.+|+||||++++|+|..++.+++|+||+++|
T Consensus 542 ~~eki-GeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 542 FKEKI-GEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred hhhhh-cCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 44567 9999999999999887899999998876544 588999999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++..... ..+.....+.|+.||+.|++||. +.++|||||.+.|+|++.++++||+|||.++.+..+....
T Consensus 621 DLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 621 DLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred cHHHHHHhccC---cccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 99999976532 22455566789999999999999 9999999999999999999999999999999887777666
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT--GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.....+-+++|||||.+..++||.+||+|+||+++||+++ ...||...... ...+-...++....
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e------~vven~~~~~~~~~------- 761 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE------QVVENAGEFFRDQG------- 761 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH------HHHHhhhhhcCCCC-------
Confidence 5556667899999999999999999999999999999876 67887755431 11111222222211
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
....... +..++..+.+++..||..+-++|||+++|...|++..
T Consensus 762 -~~~~l~~-P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 762 -RQVVLSR-PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred -cceeccC-CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1111111 1267789999999999999999999999999998753
No 90
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6e-42 Score=303.71 Aligned_cols=261 Identities=18% Similarity=0.258 Sum_probs=209.0
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCceEEEEEeccc---chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKS---VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|+..+.| |+|++|.||+|... ++..||+|.+... .....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKI-GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred Cceeeeeee-ccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 578888888 99999999999994 7779999987532 223456788999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++...... ...+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQ-KRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EecCCCCCHHHHHHHhccc-CCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 9999999999988643211 145889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||..... ....... ....+.
T Consensus 157 ~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~-~~~~~~-- 224 (267)
T cd08224 157 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLYSLCK-KIEKCD-- 224 (267)
T ss_pred cCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-------cHHHHHh-hhhcCC--
Confidence 432211 2233488899999999888899999999999999999999999864321 1111111 111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
..+. .....+..+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 225 -~~~~--------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 -YPPL--------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -CCCC--------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1110 01144567899999999999999999999999999875
No 91
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.2e-42 Score=320.41 Aligned_cols=253 Identities=14% Similarity=0.107 Sum_probs=196.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|+..+.| |+|+||+||++.. .++..||+|.+..... .....+.+|+.++.+++||||+++++.+.+....++|
T Consensus 1 ~~y~~~~~L-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVI-GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEE-EeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 468888888 9999999999998 5567999999865432 2345678899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 80 MEFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred EcCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 9999999999998653 56899999999999999999999 999999999999999999999999999998754
Q ss_pred CCCCcc---------------------------------ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh
Q 018816 216 PEGKTH---------------------------------IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262 (350)
Q Consensus 216 ~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 262 (350)
...... ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 321100 00123469999999999999899999999999999999999
Q ss_pred CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc-cCccccCCCCccchHHHHHHHHHHHHHccc--cCCCCCCCHHHHH
Q 018816 263 GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN-IDPVIVGDRSCFRKEEKLQAYVELAFKCLS--HSAEDRPTMIDVA 339 (350)
Q Consensus 263 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~--~~P~~RPt~~evl 339 (350)
|..||..... .... ..+....... +.+.. ..++++.+++.+++. .++..||++.+|+
T Consensus 232 G~~Pf~~~~~---------~~~~-~~i~~~~~~~~~p~~~----------~~s~~~~~li~~l~~~~~~r~~r~~~~ei~ 291 (363)
T cd05628 232 GYPPFCSETP---------QETY-KKVMNWKETLIFPPEV----------PISEKAKDLILRFCCEWEHRIGAPGVEEIK 291 (363)
T ss_pred CCCCCCCCCH---------HHHH-HHHHcCcCcccCCCcC----------CCCHHHHHHHHHHcCChhhcCCCCCHHHHh
Confidence 9999974321 1111 1111111111 11111 223466777777543 2334568999998
Q ss_pred HH
Q 018816 340 KK 341 (350)
Q Consensus 340 ~~ 341 (350)
+.
T Consensus 292 ~h 293 (363)
T cd05628 292 TN 293 (363)
T ss_pred CC
Confidence 74
No 92
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.8e-42 Score=322.96 Aligned_cols=252 Identities=17% Similarity=0.133 Sum_probs=196.1
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
.|...+.| |+|+||.||+|+. .++..||+|++.... ......+.+|+.++.+++||||+++++++.+.+.+++||
T Consensus 2 ~f~~~~~L-G~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTL-GIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEE-eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 57777888 9999999999999 666789999986542 233456889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 81 DYIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFR 152 (381)
T ss_pred ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccc
Confidence 999999999998653 46889999999999999999999 9999999999999999999999999999975431
Q ss_pred CCCc---------------------------------------------cccccccccCCCCCCccccccCCCCccchhH
Q 018816 217 EGKT---------------------------------------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVY 251 (350)
Q Consensus 217 ~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 251 (350)
.... .......+||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (381)
T cd05626 153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWW 232 (381)
T ss_pred cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcccee
Confidence 1000 0001234699999999999988899999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHH--ccccCC
Q 018816 252 SFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFK--CLSHSA 329 (350)
Q Consensus 252 slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~~P 329 (350)
||||++|||++|..||...... ..............+.+. ...+.++.+|+.+ |+..+|
T Consensus 233 SlG~il~elltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~----------~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 233 SVGVILFEMLVGQPPFLAPTPT---------ETQLKVINWENTLHIPPQ----------VKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred ehhhHHHHHHhCCCCCcCCCHH---------HHHHHHHccccccCCCCC----------CCCCHHHHHHHHHHccCcccc
Confidence 9999999999999999753220 111111110110001100 0234567888887 555666
Q ss_pred CCCCCHHHHHH
Q 018816 330 EDRPTMIDVAK 340 (350)
Q Consensus 330 ~~RPt~~evl~ 340 (350)
..||++.+++.
T Consensus 294 ~~R~~~~~~l~ 304 (381)
T cd05626 294 LGRNGADDIKA 304 (381)
T ss_pred cCCCCHHHHhc
Confidence 67999999986
No 93
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.9e-42 Score=311.83 Aligned_cols=266 Identities=15% Similarity=0.132 Sum_probs=197.7
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
.++|...+.| |+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++.++...++||
T Consensus 4 ~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKL-GEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeE-EecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 3678888888 9999999999999 4677899999865432 22345778999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++ ++|.+++.... ..++...+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 83 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 83 EYVH-TDLCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred ECCC-cCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 9995 67877775432 46888999999999999999999 9999999999999999999999999999987543
Q ss_pred CCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC-
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY- 294 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (350)
.... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||...... ................
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 155 VPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-----QDQLERIFLVLGTPNED 227 (303)
T ss_pred CCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-----HHHHHHHHHHhCCCChh
Confidence 2221 1233458999999999865 45889999999999999999999999754321 0011111110000000
Q ss_pred --------CccCccccCCCCccc------hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 --------MNIDPVIVGDRSCFR------KEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 --------~~~~~~~~~~~~~~~------~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+.......... ....+..+.+|+.+||+.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000000000 0012356889999999999999999999986
No 94
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.6e-42 Score=302.72 Aligned_cols=247 Identities=21% Similarity=0.314 Sum_probs=195.9
Q ss_pred cCCCceEEEEEEEC---CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchh
Q 018816 70 DEIEGYILYMGFLR---DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145 (350)
Q Consensus 70 g~G~~g~V~~~~~~---~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~ 145 (350)
|+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+++++|.
T Consensus 4 g~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~ 82 (257)
T cd05115 4 GSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLN 82 (257)
T ss_pred CCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHH
Confidence 99999999999873 34468999886553 234567889999999999999999999885 45789999999999999
Q ss_pred hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccc-c
Q 018816 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK-A 224 (350)
Q Consensus 146 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~ 224 (350)
+++.... ..+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++........... .
T Consensus 83 ~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 83 KFLSGKK----DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9986432 46899999999999999999999 99999999999999999999999999999876543322111 1
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVG 303 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (350)
....++..|+|||++.+..++.++|||||||++|++++ |..||..... ..+...+..+.....++
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~---- 221 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG----------PEVMSFIEQGKRLDCPA---- 221 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH----------HHHHHHHHCCCCCCCCC----
Confidence 11224578999999988889999999999999999996 9999874432 11222222222111111
Q ss_pred CCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 304 DRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 304 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
.++.++.+++.+||+.+|++||++.+|.+.|+.++
T Consensus 222 --------~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 222 --------ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred --------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 34567889999999999999999999999998764
No 95
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.2e-42 Score=304.91 Aligned_cols=261 Identities=20% Similarity=0.255 Sum_probs=207.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|++|.||++.. .++..+++|.+.... .....++.+|+.+++.++||||+++++++.+++..+++
T Consensus 2 ~~y~~~~~i-g~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKI-GRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhh-cccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 457777778 9999999999998 677799999876432 23446788999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++...... ...+++..++.++.+|+.||.||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 81 ~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQ-KRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEecCCCCHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 9999999999988642211 146899999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
...... .....++..|+|||++.+..++.++|+||||+++|+|++|..||..... .... ....+.....
T Consensus 157 ~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~-~~~~~~~~~~- 225 (267)
T cd08229 157 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLYS-LCKKIEQCDY- 225 (267)
T ss_pred ccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-------hHHH-HhhhhhcCCC-
Confidence 433221 2233488999999999888899999999999999999999999863221 1111 1111111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
+.. .....+..+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 226 ---~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 ---PPL-------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---CCC-------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 111 01145678999999999999999999999999999875
No 96
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.5e-42 Score=303.60 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=203.4
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|...+.| |+|+||.||+|.+.++..||+|++.... ...+.+.+|+.++++++||||+++++++.+ ...++||||+
T Consensus 6 ~~~~~~~~l-g~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKL-GQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred HHeeEeeec-CCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 568888888 9999999999999776789999987543 234678899999999999999999998754 5689999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 83 SKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred CCCcHHHHHhhccc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999965321 35789999999999999999999 9999999999999999999999999999987664333
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....++..|+|||+..+..++.++|+||||+++|+|++ |..||..... ...............
T Consensus 157 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~~- 224 (262)
T cd05071 157 YTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----------REVLDQVERGYRMPC- 224 (262)
T ss_pred ccc-ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh----------HHHHHHHhcCCCCCC-
Confidence 211 122336778999999988889999999999999999999 7878764321 111111111110000
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
....+..+.+++.+||+.+|++|||+.++++.|++.+
T Consensus 225 -----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 225 -----------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -----------ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 0145577899999999999999999999999998764
No 97
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.4e-43 Score=324.06 Aligned_cols=254 Identities=17% Similarity=0.156 Sum_probs=201.3
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
..++|...+.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+++..+
T Consensus 41 ~~~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVI-GRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEE-eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45788888998 9999999999999 566789999986532 123345778999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++|+|.+++.. ..++...+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++.
T Consensus 120 lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred EEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 99999999999998854 35788889999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCccccccccccCCCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTG----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
........ ......||+.|+|||++.+. .++.++|||||||++|||++|..||..... ........
T Consensus 191 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---------~~~~~~i~ 260 (370)
T cd05596 191 KMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---------VGTYSKIM 260 (370)
T ss_pred eccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH---------HHHHHHHH
Confidence 65432211 12344599999999998653 478999999999999999999999974322 11111111
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED--RPTMIDVAKK 341 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~evl~~ 341 (350)
. .......+. . ...+..+.+|+.+||+.+|.+ |||+.+++..
T Consensus 261 ~-~~~~~~~~~---~------~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 261 D-HKNSLTFPD---D------IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred c-CCCcCCCCC---c------CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1 111111110 0 034567899999999999987 9999999763
No 98
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.5e-43 Score=322.39 Aligned_cols=253 Identities=19% Similarity=0.186 Sum_probs=203.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+|.. .++..||+|.+..... .....+.+|+.++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVI-GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEE-EeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 467888888 9999999999999 4677999999875432 3345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 151 (350)
T cd05573 80 MEYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKM 151 (350)
T ss_pred EcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccC
Confidence 9999999999998654 46899999999999999999999 899999999999999999999999999998766
Q ss_pred CCCC---------------------------ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 018816 216 PEGK---------------------------THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGH 268 (350)
Q Consensus 216 ~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 268 (350)
.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 152 NKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred cccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 4432 0011234458999999999999999999999999999999999999987
Q ss_pred CCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 018816 269 LSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-MIDVAKK 341 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-~~evl~~ 341 (350)
.... ...............+.. . ...++.+.+|+.+||+ ||.+||+ +.++++.
T Consensus 232 ~~~~---------~~~~~~i~~~~~~~~~p~-~---------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 232 SDTL---------QETYNKIINWKESLRFPP-D---------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCH---------HHHHHHHhccCCcccCCC-C---------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 5432 111111111001000000 0 0235678999999998 9999999 9999873
No 99
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.5e-42 Score=302.21 Aligned_cols=248 Identities=21% Similarity=0.272 Sum_probs=197.1
Q ss_pred ccccCCCceEEEEEEE---CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL---RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~---~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.+ .++..+|+|.+.... ....+.+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~l-g~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 EL-GSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cC-CCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 35 9999999999975 456689999876443 234567889999999999999999999885 4567999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +++++|+||||.||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 80 GPLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 9999998643 46889999999999999999999 999999999999999999999999999999776543322
Q ss_pred c-cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 222 I-KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 222 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
. ......++..|+|||.+....++.++|+|||||++|||++ |..||..... ......+.........
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~i~~~~~~~~~- 220 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG----------NEVTQMIESGERMECP- 220 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHHCCCCCCCC-
Confidence 1 1122234678999999988889999999999999999998 9999864321 1112222222211111
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
...+..+.+++.+||+.||++||++.+|.+.|++.+
T Consensus 221 -----------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 221 -----------QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred -----------CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 134467889999999999999999999999998754
No 100
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.4e-42 Score=307.93 Aligned_cols=259 Identities=17% Similarity=0.245 Sum_probs=204.4
Q ss_pred cCcccccccccCCCceEEEEEEE------CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.+|.....| |+|+||.||++.. .++..+++|.+..........+.+|+.+++.++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWEL-GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred Hhceecccc-CCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 456667788 9999999999974 234578888887666566678999999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQ----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
++|||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++|+||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCC
Confidence 99999999999999864321 11135789999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 282 (350)
++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |.+||..... .
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---------~ 231 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---------T 231 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---------H
Confidence 99999999876543332222223335788999999998899999999999999999998 8888864322 1
Q ss_pred HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
... .......... .+ ..++..+.+++.+||+.||++||++.+|++.|++
T Consensus 232 ~~~-~~~~~~~~~~-~~-----------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 232 EAI-ECITQGRELE-RP-----------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHH-HHHHcCccCC-CC-----------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111 1111111111 01 1334678899999999999999999999998863
No 101
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.6e-42 Score=306.58 Aligned_cols=260 Identities=21% Similarity=0.296 Sum_probs=203.1
Q ss_pred hcCcccccccccCCCceEEEEEEECC------CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
+++|...+.| |+|++|.||+|.+.+ ...|++|.+.... ......+.+|+.++++++|+||+++++++.+...
T Consensus 5 ~~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRAL-GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeEC-CCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4678888888 999999999999943 4578888876443 3345678999999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC---ceeE
Q 018816 132 PALVYEPAGYCTLADRLYGPLQ--THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY---AAKL 206 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~---~~kl 206 (350)
.++||||+++++|.+++..... .....+++..++.++.||+.||.||| +.+++|+||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999865321 11135899999999999999999999 89999999999999998754 5899
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||..... . ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---------~-~~ 230 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---------Q-EV 230 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---------H-HH
Confidence 99999987643222111222224568999999998899999999999999999997 8888864321 1 11
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
...+......... ...+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus 231 ~~~~~~~~~~~~~------------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 231 MEFVTGGGRLDPP------------KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHHcCCcCCCC------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1222211111100 1334678999999999999999999999999863
No 102
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-42 Score=308.63 Aligned_cols=258 Identities=16% Similarity=0.240 Sum_probs=202.6
Q ss_pred CcccccccccCCCceEEEEEEECC------CceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
+|...+.| |+|+||.||+|...+ +..||+|.+..... ...+.+.+|+.++.+++||||+++++++.+....+
T Consensus 6 ~~~~~~~l-g~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEEL-GEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHh-CCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 45556677 999999999998732 35899999875533 33466889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY 202 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~ 202 (350)
+++||+++++|.+++..... .....+++..+..++.|++.||.||| +.+++||||||+||+++.++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 99999999999999853210 01135788899999999999999999 99999999999999999999
Q ss_pred ceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 018816 203 AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFI 281 (350)
Q Consensus 203 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~ 281 (350)
.+||+|||+++...............+++.|+|||++.++.++.++|||||||++|||++ |..||.....
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------- 232 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------- 232 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---------
Confidence 999999999876644332222233346789999999988889999999999999999998 7778763221
Q ss_pred HHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
. .....+......... ..++..+.+|+.+||+.+|++||++.+|+..|+.
T Consensus 233 ~-~~~~~i~~~~~~~~~------------~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 Q-DVIEMIRNRQVLPCP------------DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H-HHHHHHHcCCcCCCC------------CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 112222222211110 1445678999999999999999999999999874
No 103
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.4e-42 Score=303.76 Aligned_cols=258 Identities=23% Similarity=0.330 Sum_probs=200.8
Q ss_pred cccccccccCCCceEEEEEEEC-C---CceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc----
Q 018816 62 YSMRNITIDEIEGYILYMGFLR-D---RGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM---- 131 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~-~---~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 131 (350)
|...+.| |+|+||.||+|... + ...||+|++.... ....+.+.+|+..++.++||||+++++++.+...
T Consensus 1 ~~~~~~l-g~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKIL-GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred Ccccccc-CcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 3456677 99999999999983 2 2579999986542 2345678999999999999999999998876554
Q ss_pred --CeEEeecCCCCchhhhhhCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 132 --PALVYEPAGYCTLADRLYGPL-QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 132 --~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
.++++||+++++|..++.... ......+++.....++.|++.||.||| +.+++|+||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECC
Confidence 799999999999999885432 111246899999999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... . ....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---------~-~~~~ 226 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---------H-EIYD 226 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---------H-HHHH
Confidence 999886644332222222335678999999988889999999999999999999 8888764321 1 1112
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.......... +...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 227 ~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 YLRHGNRLKQ------------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHcCCCCCC------------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221111110 013456799999999999999999999999999886
No 104
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.7e-42 Score=305.50 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=209.2
Q ss_pred HhcCcccccccccCCCceEEEEEEECC-----CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeec-CC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLRD-----RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLE-AE 130 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~~-----~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 130 (350)
..++|...++| |+|+||.||+|.+.+ +..|++|.+.... ....+.+.+|+.++++++||||+++++++.. +.
T Consensus 4 ~~~~~~~~~~i-~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLL-QEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeee-cccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 34678888888 999999999999854 5688888876543 3445678899999999999999999998776 56
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT---HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
..++++||+++++|.+++...... ....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEEC
Confidence 889999999999999998653211 1135889999999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
|||+++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.||..... . ...
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~----~~~ 229 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP------F----EMA 229 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH------H----HHH
Confidence 9999986644332222223336778999999988889999999999999999999 9999864321 1 112
Q ss_pred HHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..+.... ....+ ..+++.+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus 230 ~~~~~~~-~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 230 AYLKDGY-RLAQP-----------INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHcCC-CCCCC-----------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 2222211 10000 13346789999999999999999999999999998764
No 105
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.1e-42 Score=309.88 Aligned_cols=265 Identities=18% Similarity=0.268 Sum_probs=208.3
Q ss_pred HhcCcccccccccCCCceEEEEEEE--------CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeee
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL--------RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCL 127 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~--------~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 127 (350)
..++|.....| |+|+||.||+++. .++..||+|.+.... ......+.+|+.++..+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~l-g~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPL-GEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred cHHHeeeccee-eccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34677888888 9999999999975 123368899886542 34456788999999999 8999999999999
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCce
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQT-----------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Ni 196 (350)
.....++||||+++++|.+++...... ....+++..+..++.||+.||.||| +++++|+||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceE
Confidence 999999999999999999998653210 1135788899999999999999999 99999999999999
Q ss_pred EeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCC
Q 018816 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATG 275 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~ 275 (350)
+++.++.+||+|||.++...............+++.|+|||++.+..++.++||||||+++|+|++ |..||.....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--- 245 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 245 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---
Confidence 999999999999999987654333222233346778999999988889999999999999999998 7777653221
Q ss_pred CCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
......+........ + ..++..+.+|+.+||+.+|++|||+.+|++.|+++...
T Consensus 246 -------~~~~~~~~~~~~~~~-~-----------~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 -------EELFKLLKEGHRMDK-P-----------ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -------HHHHHHHHcCCcCCC-C-----------CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 112222222111100 0 13456789999999999999999999999999998754
No 106
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.4e-42 Score=307.13 Aligned_cols=260 Identities=21% Similarity=0.320 Sum_probs=206.1
Q ss_pred hcCcccccccccCCCceEEEEEEECC------CceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD------RGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~------~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
.++|...+.| |+|+||.||+|...+ +..||+|.+..... .....+.+|+.++..++||||+++++++.++..
T Consensus 5 ~~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIREL-GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEe-cCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 3577888888 999999999999843 24799999865532 334568899999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeE
Q 018816 132 PALVYEPAGYCTLADRLYGPLQT-----HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl 206 (350)
.++||||+++++|.+++...... ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEE
Confidence 99999999999999998643211 1135788999999999999999999 999999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
+|||+++...............++..|+|||.+.+..++.++|||||||++||+++ |..||..... ...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----------~~~ 230 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----------EEV 230 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH----------HHH
Confidence 99999876644332222333446789999999988889999999999999999998 8888763221 112
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
.+........... ...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 231 ~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 231 LKFVIDGGHLDLP------------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHHhcCCCCCCC------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 2222222111111 1235678999999999999999999999998863
No 107
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.7e-42 Score=309.33 Aligned_cols=259 Identities=20% Similarity=0.276 Sum_probs=205.7
Q ss_pred hcCcccccccccCCCceEEEEEEE------CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
.++|...+.| |+|+||.||++.. ..+..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 34 ~~~~~~~~~i-g~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 34 RNNLSFGKTL-GAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHHeEEccee-eccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3578888888 9999999999985 223478999886543 23356788999999999 7999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++||||+++++|.+++..... ..+++.++..++.+++.||.||| +++++|+||||+||+++.++.++++|||
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCc
Confidence 99999999999999999865321 34899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
++................++..|+|||++.+..++.++|||||||++|+|++ |..||..... ........
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~---------~~~~~~~~ 257 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV---------DSKFYKLI 257 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc---------hHHHHHHH
Confidence 9876644332212223346788999999998899999999999999999998 9998864321 11111122
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
....... .+ ...+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 258 ~~~~~~~-~~-----------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 KEGYRMA-QP-----------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HcCCcCC-CC-----------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111100 00 12345799999999999999999999999999875
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.4e-42 Score=308.74 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=200.1
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
+|...+.| |+|+||.||++.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l-g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVL-GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEE-ecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 46677788 9999999999998 5677999999865422 22345778999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||++....
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 80 TLMNGGDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred eccCCCcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999988754321 46899999999999999999999 9999999999999999999999999999987654
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... .....|++.|+|||++.+..++.++||||+||++|+|++|..||..... ......+...+......
T Consensus 154 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~- 223 (285)
T cd05605 154 EGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE------KVKREEVERRVKEDQEE- 223 (285)
T ss_pred CCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch------hhHHHHHHHHhhhcccc-
Confidence 3221 2234589999999999988899999999999999999999999975322 11111111111111100
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
. +...+..+.+|+.+||+.||++|| ++.+++.
T Consensus 224 ~------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 224 Y------------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred c------------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0 013456789999999999999999 8888865
No 109
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-42 Score=314.63 Aligned_cols=244 Identities=19% Similarity=0.192 Sum_probs=193.0
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHH---HhcCCCCccceeeeeecCCcCeE
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFA---SQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~l 134 (350)
|...+.| |+|+||.||+|.+ .++..||+|.+.... ....+.+.+|+.++ +.++||||+++++++.+.+..++
T Consensus 1 y~i~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVL-GRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEE-eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 4556677 9999999999998 567799999987542 22345566776655 46679999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|...+.. ..+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 80 v~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 80 VMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred EEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 9999999999988754 46899999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||..... ..... .+.....
T Consensus 151 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---------~~~~~-~i~~~~~ 218 (324)
T cd05589 151 GMGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---------EEVFD-SIVNDEV 218 (324)
T ss_pred CCCCCC--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---------HHHHH-HHHhCCC
Confidence 432221 23345689999999999988999999999999999999999999874321 11111 1111111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
. . + ...+..+.+++.+||+.||++|| ++.++++
T Consensus 219 ~-~-p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 R-Y-P-----------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred C-C-C-----------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 0 0 13346788999999999999999 5666655
No 110
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.6e-43 Score=301.00 Aligned_cols=262 Identities=16% Similarity=0.159 Sum_probs=204.3
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhh--HHHHHHHHHHHHhcCCCCccceeeeeec--CCcC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYA--SERCFNNIVFASQMNHKSILKLIGCCLE--AEMP 132 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 132 (350)
..++|...+.| ++|.||.||+|++ +++.-||+|+++...... --...+||.+|.+++|||||.+-.+... -+.+
T Consensus 74 sv~efe~lnrI-~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRI-EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhc-ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 34567777888 9999999999999 667789999987653211 1235699999999999999999988764 3479
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
|+|||||+ .+|...+..-. .++...++..+..|++.|++||| .+.|+||||||+|+|+++.|.+||+|||+|
T Consensus 153 y~VMe~~E-hDLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 153 YIVMEYVE-HDLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred eeeHHHHH-hhHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchh
Confidence 99999996 68998887653 57999999999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
+.++.... ..+..+-|..|.|||.+.+. .|+++.|+||+|||+.||+++++.|..... ....+...+.+..
T Consensus 225 R~ygsp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE------~dQl~~If~llGt 296 (419)
T KOG0663|consen 225 REYGSPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE------IDQLDKIFKLLGT 296 (419)
T ss_pred hhhcCCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch------HHHHHHHHHHhCC
Confidence 98876532 23445579999999999886 499999999999999999999999875443 2222222222222
Q ss_pred cCCCccCcc-------------------ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 292 NGYMNIDPV-------------------IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... .+-|. +...+.. ...++.-.+|+...|.+||.+|.|+++.|+
T Consensus 297 Pte-~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~---~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 297 PSE-AIWPGYSELPAVKKMTFSEHPYNNLRKKFGA---LSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred Ccc-ccCCCccccchhhccccCCCCchhhhhhccc---cccchhHHHHHHHHhccCccccccHHHhhc
Confidence 111 11111 0111111 124577889999999999999999999875
No 111
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.2e-43 Score=319.60 Aligned_cols=252 Identities=17% Similarity=0.153 Sum_probs=201.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. .++..||+|.+..... ...+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLV-GRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEE-EeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 468888888 9999999999999 5677899999876432 2345678899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 152 (330)
T cd05601 80 MEYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARL 152 (330)
T ss_pred ECCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence 99999999999986542 46899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCccccccccccCCCCCCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLT------TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
...... ......||+.|+|||++. ...++.++|||||||++|+|++|..||..... ........
T Consensus 153 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---------~~~~~~i~ 222 (330)
T cd05601 153 TANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---------AKTYNNIM 222 (330)
T ss_pred CCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---------HHHHHHHH
Confidence 443322 223345899999999986 45678999999999999999999999974332 11111111
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
........ +. . ...+..+.+|+.+||+ +|++|||+.+++.
T Consensus 223 ~~~~~~~~-~~---~------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 223 NFQRFLKF-PE---D------PKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCccCC-CC---C------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11110000 10 0 0234678899999998 9999999999885
No 112
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.9e-42 Score=315.38 Aligned_cols=249 Identities=17% Similarity=0.166 Sum_probs=195.3
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
+| |+|+||.||++.+ .++..||+|.+.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 2 VI-GRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred eE-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 45 9999999999999 566789999987542 23345677899999998 699999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++... ..+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~- 151 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD- 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC-
Confidence 9999888643 57899999999999999999999 99999999999999999999999999999875322111
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|+|||||++|+|++|+.||......... ...........+...... +.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~p--- 225 (329)
T cd05588 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP-DQNTEDYLFQVILEKQIR-IP--- 225 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc-cccchHHHHHHHHcCCCC-CC---
Confidence 223446899999999999989999999999999999999999999743321100 111122222222221111 10
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT------MIDVAK 340 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt------~~evl~ 340 (350)
...+..+.+++.+||+.||++||| +.++++
T Consensus 226 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 226 ---------RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ---------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 123457889999999999999997 566653
No 113
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.8e-42 Score=309.25 Aligned_cols=266 Identities=19% Similarity=0.268 Sum_probs=202.0
Q ss_pred cCcccccccccCCCceEEEEEEECCC---------------ceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCcccee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDR---------------GPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLI 123 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~---------------~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~ 123 (350)
++|...+.| |+|+||.||++...+. ..||+|.+... .......+.+|+.++++++||||++++
T Consensus 5 ~~~~~~~~l-g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKL-GEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhcc-CCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 467778888 9999999999987332 24889988654 233456789999999999999999999
Q ss_pred eeeecCCcCeEEeecCCCCchhhhhhCCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCce
Q 018816 124 GCCLEAEMPALVYEPAGYCTLADRLYGPLQ-------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196 (350)
Q Consensus 124 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Ni 196 (350)
+++...+..++||||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++|+||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 999999999999999999999999854311 11124788999999999999999999 99999999999999
Q ss_pred EeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcccC
Q 018816 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT--GRTIGHLSRLAT 274 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~~ 274 (350)
+++.++.+||+|||++................++..|+|||++.++.++.++|+|||||++|+|++ |..||.....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-- 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-- 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--
Confidence 999999999999999876543322222223335778999999988899999999999999999998 5556553221
Q ss_pred CCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 275 GGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
..................... . + ...+..+.+|+.+||+.+|++|||+.+|++.|++
T Consensus 239 ----~~~~~~~~~~~~~~~~~~~~~----~-~----~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 ----EQVIENTGEFFRNQGRQIYLS----Q-T----PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ----HHHHHHHHHhhhhccccccCC----C-C----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111111111100000 0 0 0234679999999999999999999999998863
No 114
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.3e-42 Score=308.90 Aligned_cols=266 Identities=20% Similarity=0.241 Sum_probs=205.0
Q ss_pred cCcccccccccCCCceEEEEEEECC-----------------CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-----------------RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILK 121 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-----------------~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 121 (350)
++|...+.| |+|+||.||++...+ ...||+|.+.... ....+.+.+|+.++.+++||||++
T Consensus 5 ~~~~~~~~l-g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 5 QPLNFVEKL-GEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhCcccccc-cCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 567788888 999999999998733 2357899887553 344667889999999999999999
Q ss_pred eeeeeecCCcCeEEeecCCCCchhhhhhCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCc
Q 018816 122 LIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195 (350)
Q Consensus 122 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 195 (350)
+++++..++..+++|||+++++|.+++...... ....+++..++.++.|++.||.||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 999999999999999999999999998654311 1136899999999999999999999 9999999999999
Q ss_pred eEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCccc
Q 018816 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT--GRTIGHLSRLA 273 (350)
Q Consensus 196 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~ 273 (350)
|+++.++.++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 9999999999999999876544332222334446788999999988889999999999999999998 5666653221
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
....................+. +...+.++.+++.+||+.||++|||+.+|++.|++
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 -----QQVIENAGHFFRDDGRQIYLPR---------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred -----HHHHHHHHhccccccccccCCC---------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1111111111111111110000 01334679999999999999999999999998863
No 115
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-42 Score=317.54 Aligned_cols=240 Identities=16% Similarity=0.126 Sum_probs=194.0
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++..++||||+++++++.+.+..++||||++++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 2 LL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred ee-eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 45 9999999999998 567799999987542 233456778999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
+|..++... ..+++..+..++.||+.||.||| + .+|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~- 151 (325)
T cd05594 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA- 151 (325)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-
Confidence 999888653 46899999999999999999999 7 7999999999999999999999999999875432211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......+...... +.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~----------~~~~~~i~~~~~~-~p--- 216 (325)
T cd05594 152 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----------EKLFELILMEEIR-FP--- 216 (325)
T ss_pred -ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH----------HHHHHHHhcCCCC-CC---
Confidence 12234589999999999988999999999999999999999999864321 1111111111111 00
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
...++.+.+|+.+||+.||++|+ ++.++++
T Consensus 217 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 217 ---------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ---------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 12346789999999999999996 8999875
No 116
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7.5e-42 Score=301.22 Aligned_cols=250 Identities=18% Similarity=0.236 Sum_probs=203.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+..+.| |+|++|.||+|.. .++..|++|.+... .......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~~~~~~~l-~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKI-GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEe-cCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 46777788 9999999999999 56778999988643 23456678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 80 YAENGDLHKLLKMQRG---RPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred eCCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 9999999999875322 46889999999999999999999 99999999999999999999999999999886654
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.... .....+++.|+|||++.+..++.++|+||||+++++|++|+.||..... ..............+
T Consensus 154 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 221 (256)
T cd08529 154 NTNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ----------GALILKIIRGVFPPV 221 (256)
T ss_pred ccch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH----------HHHHHHHHcCCCCCC
Confidence 3221 2234588999999999998899999999999999999999999874321 111111111111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
. ...+..+.+++.+||+.+|++||++.++++.
T Consensus 222 ~------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 S------------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred c------------cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1 1344678999999999999999999999863
No 117
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9.8e-42 Score=305.42 Aligned_cols=266 Identities=22% Similarity=0.278 Sum_probs=203.1
Q ss_pred cCcccccccccCCCceEEEEEEE-----CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-----RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLE--AEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-----~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 132 (350)
++|.....| |+|+||.||++.. .++..||+|++........+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQL-GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeec-cCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 467777788 9999999999984 3566899999877666666789999999999999999999998754 3468
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccc
Confidence 99999999999999986532 45889999999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCCcccc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccC----CC--CcchHHHHH
Q 018816 213 KSIPEGKTHIK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT----GG--SNFFITDRV 285 (350)
Q Consensus 213 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----~~--~~~~~~~~~ 285 (350)
........... .....++..|+|||++.+..++.++|+|||||++|||++|..++....... +. .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 87654332111 111223456999999988889999999999999999999887654321100 00 000011111
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.......... + .+...+..+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 236 ~~~~~~~~~~---~---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRL---P---------APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcC---C---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1111111100 0 0113456799999999999999999999999999876
No 118
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-43 Score=311.92 Aligned_cols=255 Identities=21% Similarity=0.222 Sum_probs=200.1
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh--------------hHHHHHHHHHHHHhcCCCCcc
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY--------------ASERCFNNIVFASQMNHKSIL 120 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv 120 (350)
.+..+.|.....| |+|.||.|-+|+. .++..||||.+.+.... ..+...+||.+|+++.|||||
T Consensus 93 ~k~lNqy~l~~ei-G~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 93 RKQLNQYELIKEI-GSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred ceehhheehhhhh-cCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3456788888898 9999999999999 77779999998764321 235788999999999999999
Q ss_pred ceeeeeecCC--cCeEEeecCCCCchhhhhhCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceE
Q 018816 121 KLIGCCLEAE--MPALVYEPAGYCTLADRLYGPLQTHLEP-LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197 (350)
Q Consensus 121 ~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nil 197 (350)
+++.+..+.. .+|||+|||..|.+...=.. .+ +++.++.+++.+++.||.||| .++||||||||+|+|
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d------~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLL 242 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD------KPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLL 242 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCCC------cccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheE
Confidence 9999988654 89999999998887543222 34 899999999999999999999 999999999999999
Q ss_pred eCCCCceeEcccCCCccCCCCCcc---ccccccccCCCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCC
Q 018816 198 FQEEYAAKLFDFSLSKSIPEGKTH---IKASTAIGSLEFAAPEYLTTGY----YNEKTDVYSFGKLLLVLLTGRTIGHLS 270 (350)
Q Consensus 198 l~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~el~tg~~p~~~~ 270 (350)
|+.+|++||+|||.+..+..+... ......+|||.|+|||.+.++. -+.+.||||+||+||-|+.|+.||...
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 999999999999999877433211 1122356999999999998743 357899999999999999999999743
Q ss_pred cccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 271 RLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. .....+.+.. ...-|.. .+..+.+.+||.++|..||+.|.+..+|...
T Consensus 323 ~~---------~~l~~KIvn~---pL~fP~~---------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 323 FE---------LELFDKIVND---PLEFPEN---------PEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred hH---------HHHHHHHhcC---cccCCCc---------ccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 21 1111111111 1111110 1456789999999999999999999988654
No 119
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-41 Score=298.96 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=197.8
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchh
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~ 145 (350)
+| |+|+||.||+|...++..||+|.+..... .....+.+|+.++++++||||+++++++.+.+..++||||+++++|.
T Consensus 2 ~i-g~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LL-GKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred cc-CCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 45 99999999999988788999999876532 33456889999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccccc
Q 018816 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225 (350)
Q Consensus 146 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 225 (350)
+++.... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++......... ...
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~ 152 (250)
T cd05085 81 SFLRKKK----DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSG 152 (250)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCC
Confidence 9886432 45789999999999999999999 999999999999999999999999999998754332221 112
Q ss_pred ccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 226 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
...+++.|+|||++.+..++.++||||||+++|++++ |..||..... ................
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~------ 216 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN----------QQAREQVEKGYRMSCP------ 216 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH----------HHHHHHHHcCCCCCCC------
Confidence 2234678999999998889999999999999999998 8989864321 1111112211111000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 217 ------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 ------QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 134567999999999999999999999999875
No 120
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.3e-42 Score=302.95 Aligned_cols=257 Identities=18% Similarity=0.246 Sum_probs=204.3
Q ss_pred hcCcccccccccCCCceEEEEEEEC-CCc---eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR-DRG---PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~-~~~---~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.++|+..+.| |+|+||.||+|... +++ .+++|.+.... ....+.+.+|+.++++++||||+++.+++.+.+..+
T Consensus 4 ~~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVI-GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEe-cCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 4577888888 99999999999984 332 68888886542 344567889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.
T Consensus 83 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 83 IITEYMENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccce
Confidence 9999999999999986532 46899999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCcccc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 214 SIPEGKTHIK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 214 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
.......... ......++.|+|||++.+..++.++|||||||++||+++ |..||..... ......+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----------~~~~~~i~~ 225 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----------HEVMKAIND 225 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH----------HHHHHHHhc
Confidence 6543222111 111123457999999988889999999999999999997 9999864321 111222221
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.. ..+. ....+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 ~~---~~~~---------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GF---RLPA---------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CC---CCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 0010 013456789999999999999999999999999876
No 121
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.6e-42 Score=308.11 Aligned_cols=266 Identities=17% Similarity=0.248 Sum_probs=203.3
Q ss_pred cCcccccccccCCCceEEEEEEEC-----------------CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-----------------DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILK 121 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-----------------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 121 (350)
++|+..+.| |+|+||.||++... +...||+|.+.... ......+.+|+.+++.++|+||++
T Consensus 5 ~~~~~~~~l-g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKL-GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeec-cCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 467888888 99999999998642 23368888886542 344567899999999999999999
Q ss_pred eeeeeecCCcCeEEeecCCCCchhhhhhCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCc
Q 018816 122 LIGCCLEAEMPALVYEPAGYCTLADRLYGPLQT------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195 (350)
Q Consensus 122 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 195 (350)
+++++.+++..++||||+++++|.+++...... ....+++..+..++.|++.||.||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence 999999999999999999999999998653211 1134778899999999999999999 9999999999999
Q ss_pred eEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCccc
Q 018816 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT--GRTIGHLSRLA 273 (350)
Q Consensus 196 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t--g~~p~~~~~~~ 273 (350)
|+++.++.++|+|||++................+++.|++||+..++.++.++|+|||||++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD- 239 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh-
Confidence 9999999999999999876543322222222335678999999888889999999999999999998 6677753322
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
....................+.. ..++..+.+|+.+||+.||++|||+.+|++.|++
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 -----EQVIENTGEFFRDQGRQVYLPKP---------ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHHHHHHHhhccccccCCCC---------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111122111111111110 1344678999999999999999999999999874
No 122
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2e-42 Score=322.31 Aligned_cols=253 Identities=16% Similarity=0.109 Sum_probs=197.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. .++..||+|.+.... ....+.+.+|+.++.+++||||+++++++.++...++|
T Consensus 1 ~~y~~~~~l-G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVI-GKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEE-eecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 467888888 9999999999998 667799999986542 23345678899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 80 MEFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151 (377)
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999998653 56889999999999999999999 999999999999999999999999999998633
Q ss_pred CCCCc------------cc---------------------------------cccccccCCCCCCccccccCCCCccchh
Q 018816 216 PEGKT------------HI---------------------------------KASTAIGSLEFAAPEYLTTGYYNEKTDV 250 (350)
Q Consensus 216 ~~~~~------------~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di 250 (350)
..... .. .....+||+.|+|||++.+..++.++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 231 (377)
T cd05629 152 HKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDW 231 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceee
Confidence 21000 00 0012358999999999998899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCC
Q 018816 251 YSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAE 330 (350)
Q Consensus 251 wslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~ 330 (350)
|||||++|||++|.+||..... .......... .....-|. . ...+.++.+|+.+||. +|.
T Consensus 232 wSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~~-~~~~~~p~---~------~~~s~~~~dli~~lL~-~~~ 291 (377)
T cd05629 232 WSLGAIMFECLIGWPPFCSENS---------HETYRKIINW-RETLYFPD---D------IHLSVEAEDLIRRLIT-NAE 291 (377)
T ss_pred EecchhhhhhhcCCCCCCCCCH---------HHHHHHHHcc-CCccCCCC---C------CCCCHHHHHHHHHHhc-CHh
Confidence 9999999999999999964321 1111111111 10000010 0 0234678899999998 676
Q ss_pred CC---CCHHHHHHH
Q 018816 331 DR---PTMIDVAKK 341 (350)
Q Consensus 331 ~R---Pt~~evl~~ 341 (350)
+| +|+.+++..
T Consensus 292 ~r~~r~~~~~~l~h 305 (377)
T cd05629 292 NRLGRGGAHEIKSH 305 (377)
T ss_pred hcCCCCCHHHHhcC
Confidence 65 599998863
No 123
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-42 Score=309.77 Aligned_cols=264 Identities=19% Similarity=0.254 Sum_probs=206.5
Q ss_pred hcCcccccccccCCCceEEEEEEEC--------CCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR--------DRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLE 128 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~--------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 128 (350)
.++|...+.| |+|+||.||++... ....+|+|.+.... .....++.+|+.++..+ +||||+++++++..
T Consensus 17 ~~~~~i~~~l-g~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPL-GEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeee-ccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 3578888888 99999999999862 12369999887542 23456788999999999 79999999999999
Q ss_pred CCcCeEEeecCCCCchhhhhhCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceE
Q 018816 129 AEMPALVYEPAGYCTLADRLYGPLQT-----------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197 (350)
Q Consensus 129 ~~~~~lv~e~~~~~sL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nil 197 (350)
.+..++||||+++++|.+++...... ....+++..++.++.|++.||.||| +.+++|+||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheE
Confidence 99999999999999999999653210 1135889999999999999999999 999999999999999
Q ss_pred eCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCC
Q 018816 198 FQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGG 276 (350)
Q Consensus 198 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~ 276 (350)
++.++.++|+|||.+................+++.|+|||++.+..++.++|+|||||++|+|++ |..||.....
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---- 248 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---- 248 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH----
Confidence 99999999999999876543222111222224578999999988889999999999999999998 7888753221
Q ss_pred CcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 277 SNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..+............. ...+.++.+|+.+||+.+|++|||+.+|++.|+++...
T Consensus 249 ------~~~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 ------EELFKLLKEGHRMDKP------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ------HHHHHHHHcCCCCCCC------------CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1112222221111000 13456788999999999999999999999999998754
No 124
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.8e-42 Score=306.50 Aligned_cols=245 Identities=15% Similarity=0.155 Sum_probs=192.4
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
||+|+||.||++.. .++..||+|.+..... .....+..|+.++.+++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 49999999999998 5677999999864321 2234456799999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++........ .
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~---~ 151 (277)
T cd05607 81 KYHIYNVGE---RGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---I 151 (277)
T ss_pred HHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---e
Confidence 988754321 45889999999999999999999 99999999999999999999999999999876643322 2
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||...... ........... ...... .
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~----~~~~~~----~ 218 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-----VAKEELKRRTL----EDEVKF----E 218 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-----hhHHHHHHHhh----cccccc----c
Confidence 2334899999999999888999999999999999999999998643210 01011111111 000000 0
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+.++.+|+.+||+.||++||++.|+++
T Consensus 219 -----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 219 -----HQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred -----cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 0134567899999999999999999977654
No 125
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.6e-42 Score=306.81 Aligned_cols=260 Identities=20% Similarity=0.268 Sum_probs=204.6
Q ss_pred hcCcccccccccCCCceEEEEEEEC------CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
.++|.....| |+|+||.||++... ++..||+|.+.... ......+.+|+.++++++||||+++++++.++..
T Consensus 4 ~~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDI-GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccc-cccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 4678888888 99999999999873 45689999886543 2345678899999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQ-----------------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPW 194 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~-----------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~ 194 (350)
.++||||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++|+||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHh
Confidence 9999999999999999864211 11134788899999999999999999 999999999999
Q ss_pred ceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccc
Q 018816 195 NILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLA 273 (350)
Q Consensus 195 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~ 273 (350)
||+++.++.++|+|||.+.................+..|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~- 238 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH- 238 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 99999999999999999876543322222222335678999999988899999999999999999997 8778753221
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
.. ....+......... ...+.++.+|+.+||+.+|++|||+.|+++.|++
T Consensus 239 --------~~-~~~~~~~~~~~~~~------------~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 --------EE-VIYYVRDGNVLSCP------------DNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --------HH-HHHHHhcCCCCCCC------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 11122211111000 1334679999999999999999999999999874
No 126
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-42 Score=314.63 Aligned_cols=244 Identities=17% Similarity=0.159 Sum_probs=191.3
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 2 VI-GRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 45 9999999999999 556689999987542 23345677899888877 799999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|..++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 9999888543 46899999999999999999999 99999999999999999999999999999875322211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|..||......... ...........+...... +.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~-~~~~~~~~~~~i~~~~~~-~p--- 225 (329)
T cd05618 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-DQNTEDYLFQVILEKQIR-IP--- 225 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCc-ccccHHHHHHHHhcCCCC-CC---
Confidence 123445899999999999999999999999999999999999999643221111 111122222222221111 11
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
...+..+.+++.+||+.||++||++
T Consensus 226 ---------~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 226 ---------RSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---------CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1334578899999999999999984
No 127
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9e-42 Score=301.00 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=205.4
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.++|...+.| |+|++|.||+|...+ +.||+|.+..... ..+++.+|+.+++.++|+||+++++++.+....++||||
T Consensus 5 ~~~~~~~~~i-g~g~~g~v~~~~~~~-~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATI-GKGEFGDVMLGDYRG-QKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeee-ecCCCceEEEEEecC-cEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 3567778888 999999999999875 4899999976643 567789999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 82 MAKGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred cCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 999999999865421 36899999999999999999999 999999999999999999999999999998876332
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.. ....+..|+|||++.++.++.++|+||||+++|++++ |..||..... ...............
T Consensus 156 ~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 220 (256)
T cd05039 156 QD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----------KDVVPHVEKGYRMEA 220 (256)
T ss_pred cc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHhcCCCCCC
Confidence 21 2225678999999988889999999999999999997 9988763321 111222221111100
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
+ ...++.+.+++.+||..+|++|||+.++++.|+++
T Consensus 221 -~-----------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 -P-----------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -c-----------cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0 13356789999999999999999999999999864
No 128
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.5e-42 Score=305.50 Aligned_cols=254 Identities=19% Similarity=0.181 Sum_probs=201.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|.....| |+|+||.||+|+. .++..||+|.+..........+.+|+.++.+++||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~l-g~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRV-GSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhhee-ecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 468888888 9999999999998 56678999988755444456688999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++... ..+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|||++......
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 88 CGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999988643 46889999999999999999999 999999999999999999999999999998765432
Q ss_pred CccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.. ......+++.|+|||.+. ...++.++|+|||||++|||++|..|+....... .. ..... ..
T Consensus 160 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---------~~-~~~~~--~~ 225 (267)
T cd06646 160 IA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---------AL-FLMSK--SN 225 (267)
T ss_pred cc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---------hh-eeeec--CC
Confidence 11 122334888999999874 3457889999999999999999999986432110 00 00000 00
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
...+.+... ...+..+.+++.+||+.+|++|||++++++.|
T Consensus 226 ~~~~~~~~~------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 226 FQPPKLKDK------TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCCccc------cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 011111110 13456899999999999999999999998753
No 129
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.5e-42 Score=308.52 Aligned_cols=260 Identities=16% Similarity=0.198 Sum_probs=193.4
Q ss_pred cCcccccccccCCCceEEEEEEE-C-CCceEEEEEecccch--hhHHHHHHHHHHHHhc---CCCCccceeeeee-----
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-R-DRGPILVMKYRKSVR--YASERCFNNIVFASQM---NHKSILKLIGCCL----- 127 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~-~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~----- 127 (350)
++|...+.| |+|+||.||+|.+ . ++..||+|.+..... .....+.+|+.++..+ +||||++++++|.
T Consensus 1 ~~Y~~~~~l-g~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEe-ccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 357778888 9999999999998 3 456789998864322 2234566788777766 6999999999885
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
.....++||||++ ++|.+++..... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEc
Confidence 2346899999996 689988865322 45889999999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
|||++....... ......||+.|+|||++.+..++.++|||||||++|||++|.+||...... . ....
T Consensus 153 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~------~---~~~~ 220 (290)
T cd07862 153 DFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------D---QLGK 220 (290)
T ss_pred cccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH------H---HHHH
Confidence 999987654321 223445899999999998889999999999999999999999999754321 1 1111
Q ss_pred HHHhcC---CC-----------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 FIRSNG---YM-----------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 ~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...... .. .+.+.......... ...+..+.+|+.+||+.||++|||+.++++
T Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 221 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV-TDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHhCCCChhhchhhhcccchhccCCCCCCHHHHc-cCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 111100 00 00000000000000 124467889999999999999999999985
No 130
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.8e-42 Score=301.84 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=201.4
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|...+.| |+|++|.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....+++|||+
T Consensus 6 ~~~~~~~~i-g~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKL-GNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhhee-ccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 466777788 99999999999987777899999876432 3467899999999999999999999875 45689999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++..... ..+++..+..++.+++.||.||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 83 SKGSLLDFLKDGEG---RALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 99999999865321 45889999999999999999999 8999999999999999999999999999997654332
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....++..|+|||++.+..++.++|+||||+++|+|++ |..||..... .. ....+........
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---------~~-~~~~~~~~~~~~~- 224 (260)
T cd05070 157 YTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---------RE-VLEQVERGYRMPC- 224 (260)
T ss_pred ccc-ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---------HH-HHHHHHcCCCCCC-
Confidence 211 112225678999999988889999999999999999999 8888864321 11 1111211111000
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+...+..+.+|+.+||..+|++|||+.++.+.|++
T Consensus 225 -----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 -----------PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -----------CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01345679999999999999999999999999875
No 131
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.9e-42 Score=307.89 Aligned_cols=262 Identities=21% Similarity=0.248 Sum_probs=199.6
Q ss_pred ccccccccCCCceEEEEEEE-----CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCeE
Q 018816 63 SMRNITIDEIEGYILYMGFL-----RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPAL 134 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~-----~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 134 (350)
.....| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++||||+++++++... ...++
T Consensus 7 ~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 7 KKIRVL-GEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred eeceec-ccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 566777 9999999988653 456689999986543 23456788999999999999999999988754 35789
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++..
T Consensus 86 v~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 86 IMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999864 35899999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCcccc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC-----CcchHHHHHHHH
Q 018816 215 IPEGKTHIK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG-----SNFFITDRVEKF 288 (350)
Q Consensus 215 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~ 288 (350)
......... .....++..|+|||.+.+..++.++||||||+++|+|++|..|+......... ............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 654322111 12223566799999998888999999999999999999999997643211000 000000000000
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
.. ....... +...+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 237 ~~--------~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LE--------RGMRLPC----PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hh--------cCCCCCC----CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 0000000 1134568999999999999999999999999999874
No 132
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.9e-42 Score=306.42 Aligned_cols=247 Identities=14% Similarity=0.136 Sum_probs=194.4
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
||+|+||+||++.+ .++..||+|++..... ...+.+..|+.+++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 49999999999998 5667999999865422 2235677899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++..... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++........ ..
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~ 154 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KT 154 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cc
Confidence 988754221 1146899999999999999999999 99999999999999999999999999999876544322 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....||+.|+|||++.+..++.++|+|||||++|+|++|+.||...... .. ........ ......
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-----~~-~~~~~~~~-------~~~~~~-- 219 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-----VE-NKELKQRI-------LNDSVT-- 219 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-----hh-HHHHHHhh-------cccCCC--
Confidence 2345899999999999999999999999999999999999998743211 00 00001100 000000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
.+...+..+.+++.+||+.||++|| |++++++
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 220 ----YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ----CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0013456789999999999999999 7777775
No 133
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.2e-42 Score=322.83 Aligned_cols=264 Identities=20% Similarity=0.278 Sum_probs=205.9
Q ss_pred HhcCcccccccccCCCceEEEEEEEC------CCceEEEEEecccch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSVR-YASERCFNNIVFASQMN-HKSILKLIGCCLEA 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 129 (350)
..++|...+.| |+|+||.||+|++. .+..||+|++..... ...+.+.+|+.++.++. ||||++++++|...
T Consensus 35 ~~~~~~~~~~l-G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 35 PRDNLVLGRTL-GSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred cHHHeehhhhc-cCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34566777788 99999999999863 335899999975432 33456889999999997 99999999999999
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCC-------------------------------------------------------
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQT------------------------------------------------------- 154 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~------------------------------------------------------- 154 (350)
...++||||+++|+|.+++......
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 9999999999999999998643210
Q ss_pred --------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCce
Q 018816 155 --------------------------------------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196 (350)
Q Consensus 155 --------------------------------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Ni 196 (350)
....+++...+.++.||+.||.||| +.+++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceE
Confidence 0124677888999999999999999 99999999999999
Q ss_pred EeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCC
Q 018816 197 LFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATG 275 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~ 275 (350)
|++.++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~--- 347 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM--- 347 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc---
Confidence 999999999999999976543322222223346788999999998889999999999999999998 8888764321
Q ss_pred CCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
.......+..+. ....+ ...+..+.+|+.+||+.+|++||++.+|++.|+++.
T Consensus 348 ------~~~~~~~~~~~~-~~~~p-----------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 ------NEQFYNAIKRGY-RMAKP-----------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ------hHHHHHHHHcCC-CCCCC-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111121111 11011 133467999999999999999999999999999875
No 134
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-41 Score=306.98 Aligned_cols=260 Identities=19% Similarity=0.241 Sum_probs=202.2
Q ss_pred cCcccccccccCCCceEEEEEEECC-Cc--eEEEEEeccc-chhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-RG--PILVMKYRKS-VRYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-~~--~vaik~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 134 (350)
++|+....| |+|+||.||+|...+ +. .+++|.+... .....+.+.+|+.++.++ +||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVI-GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeee-cCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 467888888 999999999999843 32 4688877642 234456788999999999 79999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 135 VYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
++||+++++|.+++..... .....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCe
Confidence 9999999999999864321 01135889999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 282 (350)
+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||..... .
T Consensus 158 ~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---------~ 225 (297)
T cd05089 158 SKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---------A 225 (297)
T ss_pred EEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---------H
Confidence 9999999986432111 1111223567999999988889999999999999999997 9999864321 1
Q ss_pred HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
... ....... .+... ..++..+.+|+.+||+.+|.+|||+.++++.|+++...
T Consensus 226 ~~~-~~~~~~~----~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 226 ELY-EKLPQGY----RMEKP--------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHH-HHHhcCC----CCCCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 1111111 00000 13446789999999999999999999999999988653
No 135
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.3e-42 Score=313.82 Aligned_cols=235 Identities=20% Similarity=0.179 Sum_probs=189.7
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.. .++..||+|.+.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 2 VL-GKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred ee-eeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 45 9999999999999 456689999986542 23345677888888877 699999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~- 151 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK- 151 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-
Confidence 9999988654 46889999999999999999999 99999999999999999999999999999875422211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .. ....+..... ..+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---------~~-~~~~i~~~~~--~~~-- 216 (320)
T cd05590 152 -TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---------DD-LFEAILNDEV--VYP-- 216 (320)
T ss_pred -cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---------HH-HHHHHhcCCC--CCC--
Confidence 12344589999999999988999999999999999999999999974321 11 1111111111 011
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
...+..+.+++.+||+.||++||++
T Consensus 217 ---------~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 ---------TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ---------CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1234578899999999999999998
No 136
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.4e-41 Score=300.56 Aligned_cols=255 Identities=17% Similarity=0.152 Sum_probs=192.9
Q ss_pred ccccCCCceEEEEEEECC---CceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFLRD---RGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~---~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||+|...+ ...+++|.+..... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 2 ~l-g~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EI-GNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cc-cccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 35 999999999998743 34689998865432 33457889999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++...........++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999986532211235677788899999999999999 9999999999999999999999999999987554332222
Q ss_pred cccccccCCCCCCccccccC-------CCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 223 KASTAIGSLEFAAPEYLTTG-------YYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
......++..|+|||++... .++.++|+||||+++|||++ |..||..... . ............
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~---~~~~~~~~~~~~ 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD------E---QVLTYTVREQQL 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh------H---HHHHHHhhcccC
Confidence 22334477889999988642 35789999999999999996 9999864321 0 111111111112
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
...++.+.. ..++.+.+++..|| .+|++|||+.+|++.|.
T Consensus 229 ~~~~~~~~~--------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKL--------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCC--------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 222222211 23356888999999 58999999999998874
No 137
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8e-42 Score=308.99 Aligned_cols=260 Identities=20% Similarity=0.237 Sum_probs=201.8
Q ss_pred hcCcccccccccCCCceEEEEEEEC-CCc--eEEEEEeccc-chhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR-DRG--PILVMKYRKS-VRYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~-~~~--~vaik~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 133 (350)
.++|+..+.| |+|+||.||+|.+. ++. .+++|.+... .......+.+|+.++.++ +||||+++++++.+.+..+
T Consensus 6 ~~~~~~~~~l-g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVI-GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeee-cCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 3577888888 99999999999983 333 4577776543 234456788999999999 8999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY 202 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~ 202 (350)
+||||+++++|.+++..... .....+++..++.++.|++.||.||| +.+++||||||+|||++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCC
Confidence 99999999999999864321 11135789999999999999999999 99999999999999999999
Q ss_pred ceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 018816 203 AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFI 281 (350)
Q Consensus 203 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~ 281 (350)
.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 162 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------- 229 (303)
T cd05088 162 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------- 229 (303)
T ss_pred cEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh---------
Confidence 99999999986432111 1112224678999999988889999999999999999998 9999864321
Q ss_pred HHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 282 TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
... ........ . ... +...+..+.+|+.+||+.+|++||++.+++..|+++..
T Consensus 230 ~~~-~~~~~~~~-~---~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 230 AEL-YEKLPQGY-R---LEK--------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHH-HHHHhcCC-c---CCC--------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 011 11111110 0 000 01234578999999999999999999999999998764
No 138
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.8e-42 Score=313.17 Aligned_cols=240 Identities=20% Similarity=0.174 Sum_probs=192.9
Q ss_pred ccccCCCceEEEEEEE----CCCceEEEEEecccch----hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 67 ITIDEIEGYILYMGFL----RDRGPILVMKYRKSVR----YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~----~~~~~vaik~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.| |+|+||.||++.. ..+..||+|.+..... .....+.+|+.++++++||||+++++++.+++..++||||
T Consensus 3 ~l-g~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 3 VL-GKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ee-eecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 45 9999999999986 3566899999865421 2234577899999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++... ..+.+..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999988653 46788889999999999999999 999999999999999999999999999998754322
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ .... .+.
T Consensus 154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---------~~~~~~~~-~~~~-~~~ 220 (323)
T cd05584 154 GT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---------KKTIDKIL-KGKL-NLP 220 (323)
T ss_pred CC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---------HHHHHHHH-cCCC-CCC
Confidence 21 12334589999999999988899999999999999999999999874321 11111111 1111 111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
+ ..+..+.+++.+||+.+|++|| ++.+++.
T Consensus 221 ~------------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 P------------YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C------------CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1 2345788999999999999999 7888766
No 139
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.5e-42 Score=311.83 Aligned_cols=239 Identities=19% Similarity=0.170 Sum_probs=189.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.. .++..||+|.+.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 2 VL-GKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 45 9999999999999 556689999987542 12334556677777654 899999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 9999988653 46899999999999999999999 9999999999999999999999999999987543322
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
.......||+.|+|||++.+..++.++|||||||++|||++|..||..... .... ..+.... ..+.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---------~~~~-~~i~~~~-~~~~--- 216 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---------DELF-DSILNDR-PHFP--- 216 (316)
T ss_pred CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---------HHHH-HHHHcCC-CCCC---
Confidence 123344589999999999988999999999999999999999999874321 1111 1111111 1111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI-DVA 339 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~-evl 339 (350)
...+..+.+++.+||+.||++||++. +++
T Consensus 217 ---------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 217 ---------RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ---------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 12345788999999999999999875 454
No 140
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.1e-42 Score=319.64 Aligned_cols=256 Identities=17% Similarity=0.179 Sum_probs=200.3
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
....++|...+.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.++..
T Consensus 39 ~~~~~~y~~~~~l-G~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 39 QMKAEDYDVVKVI-GRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred CCCHHHCeEEEEE-EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445789999998 9999999999999 556688999886432 1234457789999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++|+|.+++.. ..++...+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEeccc
Confidence 9999999999999999854 35788999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTG----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
+......... ......||+.|+|||++.+. .++.++|+|||||++|+|++|..||..... ......
T Consensus 189 a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---------~~~~~~ 258 (370)
T cd05621 189 CMKMDETGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---------VGTYSK 258 (370)
T ss_pred ceecccCCce-ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH---------HHHHHH
Confidence 9876432221 22345699999999998754 378999999999999999999999974321 111122
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED--RPTMIDVAKK 341 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~evl~~ 341 (350)
.........+.. . ...+..+.+++..||+.+|.+ |||+.++++.
T Consensus 259 i~~~~~~~~~p~----~------~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 259 IMDHKNSLNFPE----D------VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHhCCcccCCCC----c------ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 221111111110 0 134567889999999865543 8899998874
No 141
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-41 Score=302.37 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=202.2
Q ss_pred cCcccccccccCCCceEEEEEEEC-CC---ceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DR---GPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~---~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
++|...+.| |+|+||.||+|.+. ++ ..||+|.+... .......+..|+.++++++||||+++++++.++...++
T Consensus 4 ~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVI-GAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEe-cCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 456777888 99999999999983 33 25999998654 23445679999999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++.... +.+++.+++.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 83 ITEFMENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred EEecCCCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccc
Confidence 999999999999986532 46889999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCccccc-ccc--ccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 215 IPEGKTHIKA-STA--IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 215 ~~~~~~~~~~-~~~--~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
.......... ... ..+..|+|||++.+..++.++|||||||++||+++ |..||..... . .....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~------~----~~~~~i~ 225 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------Q----DVINAIE 225 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH------H----HHHHHHH
Confidence 5432221111 111 12457999999998899999999999999999886 9998864321 1 1111221
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
....... +.+++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 226 ~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 QDYRLPP------------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCcCCC------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1110000 013456788999999999999999999999999875
No 142
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.3e-42 Score=313.26 Aligned_cols=240 Identities=17% Similarity=0.157 Sum_probs=192.7
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
+| |+|+||.||+|+. .++..||+|.+.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 2 VL-GKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred cc-ccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 45 9999999999999 456689999987542 23345677889998876 799999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+.+... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 9999888653 46889999999999999999999 99999999999999999999999999999875432221
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...... +.... ...|
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---------~~~~~~-i~~~~--~~~p-- 216 (321)
T cd05591 152 -TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---------DDLFES-ILHDD--VLYP-- 216 (321)
T ss_pred -cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---------HHHHHH-HHcCC--CCCC--
Confidence 12344589999999999988999999999999999999999999974432 111111 11111 1011
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCC-------CHHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-------TMIDVAK 340 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-------t~~evl~ 340 (350)
...+.++.+++.+||+.||++|| ++.++++
T Consensus 217 ---------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 217 ---------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ---------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 02345788999999999999999 7777764
No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.5e-41 Score=305.00 Aligned_cols=264 Identities=19% Similarity=0.298 Sum_probs=205.6
Q ss_pred HhcCcccccccccCCCceEEEEEEEC------CCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
..++|+....| |+|+||.||+|..+ .+..||+|.+..... .....+.+|+.++++++||||+++++++.++.
T Consensus 4 ~~~~~~i~~~l-g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLREL-GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeee-cCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678888898 99999999999763 234789998764432 33456789999999999999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCcee
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQ-----THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~k 205 (350)
..++||||+++|+|.+++..... ......++..+..++.|++.||.||| +++++|+||||+||+++.++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999964211 11134577888999999999999999 99999999999999999999999
Q ss_pred EcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHH
Q 018816 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 206 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 284 (350)
|+|||+++...............++..|+|||.+.++.++.++|+|||||++|||++ |..||..... ..
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~----------~~ 229 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----------EQ 229 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH----------HH
Confidence 999999876543332222223335778999999998899999999999999999998 6778753221 11
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.............. ...+..+.+++.+||+.+|++|||+.++++.|++...
T Consensus 230 ~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 230 VLKFVMDGGYLDQP------------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred HHHHHHcCCCCCCC------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 11222211111100 1334679999999999999999999999999988643
No 144
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=306.49 Aligned_cols=261 Identities=18% Similarity=0.182 Sum_probs=198.8
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----cCeE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----MPAL 134 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~l 134 (350)
.|...+++ |.|+||.||+|.. .++..||||+...+.. ---+|+.+|+.++|||||++.-+|.... ...+
T Consensus 25 ~~~~~~li-G~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLI-GSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEE-eecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 45566777 9999999999999 5567999999876643 1237999999999999999998887432 4568
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccCCCc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFSLSK 213 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 213 (350)
||||+| .+|.+.+....... ..++.-.+.-+..||.+||.||| ..+||||||||.|+|+|.+ |.+||+|||.|+
T Consensus 100 VleymP-~tL~~~~r~~~~~~-~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 100 VLEYMP-ETLYRVIRHYTRAN-QRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHhch-HHHHHHHHHHhhcC-CCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999997 59998886421111 56888888999999999999999 8999999999999999976 899999999999
Q ss_pred cCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
....+... .....|..|.|||.+.+. .|+.+.||||.||++.||+-|++.|.+.+.. .......+.+...
T Consensus 175 ~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~------dQL~eIik~lG~P 245 (364)
T KOG0658|consen 175 VLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV------DQLVEIIKVLGTP 245 (364)
T ss_pred eeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH------HHHHHHHHHhCCC
Confidence 88665543 344478999999999875 5999999999999999999999999864321 1111111111111
Q ss_pred --------C---CCccCccccCCCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 --------G---YMNIDPVIVGDRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 --------~---~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. .....|.+...... ......+++..+|+.++|+++|.+|.++.+++.
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1 12222333333211 112255678999999999999999999999885
No 145
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-41 Score=299.60 Aligned_cols=253 Identities=21% Similarity=0.244 Sum_probs=201.2
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|.....| |+|++|.||+|.+.++..||+|.+.... ...+.+.+|+.++++++|||++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~i-g~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKL-GQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeee-cCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 456777788 9999999999999777789999876543 23467889999999999999999999875 45689999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++..... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 83 GKGSLLDFLKEGDG---KYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999965321 35789999999999999999999 9999999999999999999999999999997654332
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||+..+..++.++|+||||+++|+|++ |..||..... ...............
T Consensus 157 ~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~~~~~~~~~~- 224 (260)
T cd05069 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN----------REVLEQVERGYRMPC- 224 (260)
T ss_pred cc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHHcCCCCCC-
Confidence 21 1112235678999999988889999999999999999999 8888864321 111111211111100
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+...+..+.+++.+||+.||++||++.+|++.|++
T Consensus 225 -----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 -----------PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----------CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01345679999999999999999999999999975
No 146
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=318.45 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=209.6
Q ss_pred ccccccCCCceEEEEEEEC---CC--ceEEEEEecc-cchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 65 RNITIDEIEGYILYMGFLR---DR--GPILVMKYRK-SVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~---~~--~~vaik~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.+.| |.|.||.||+|+.. .+ -.||||.... .+....+.|+.|..+|++++|||||+++|+|.+. ..+||||.
T Consensus 394 ~r~i-G~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL 471 (974)
T KOG4257|consen 394 KRLI-GEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMEL 471 (974)
T ss_pred HHhh-cCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEec
Confidence 3455 99999999999982 22 3788999876 4556688899999999999999999999999664 57999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
++.|.|..++..+. ..++......++.||+.||.||| +.++|||||..+|||+.+...+||+|||+++.+...
T Consensus 472 ~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 472 APLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred ccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 99999999997654 57889999999999999999999 999999999999999999999999999999988665
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
...... ...-++.|||||-+....|+.+||||-|||.+||+++ |..||...... ..+
T Consensus 545 ~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs---------------------DVI 602 (974)
T KOG4257|consen 545 AYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS---------------------DVI 602 (974)
T ss_pred chhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---------------------ceE
Confidence 544333 3336789999999999999999999999999999977 99999854321 111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
-..-+|...+.. ..|++.+..|+.+||.++|.+||++.++...|.+++.
T Consensus 603 ~~iEnGeRlP~P-~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCP-PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCC-CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 111222222222 3788999999999999999999999999999998875
No 147
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.6e-42 Score=312.93 Aligned_cols=241 Identities=16% Similarity=0.157 Sum_probs=192.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCC-CccceeeeeecCCcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHK-SILKLIGCCLEAEMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv 135 (350)
+|...+.| |+|+||.||+|.. .++..||+|.+.... ....+.+..|+.++..++|+ +|+.+++++.+.+..++|
T Consensus 1 ~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVL-GKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEE-eeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 46777888 9999999999999 455689999987542 23445678899999999765 588899999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05587 80 MEYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN 151 (324)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence 9999999999988653 46889999999999999999999 999999999999999999999999999998653
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+......
T Consensus 152 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----------~~~~~~i~~~~~~ 219 (324)
T cd05587 152 IFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE----------DELFQSIMEHNVS 219 (324)
T ss_pred CCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----------HHHHHHHHcCCCC
Confidence 22111 12344589999999999999999999999999999999999999874321 1111111111110
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
+. ...+..+.+++.+||+.||++||+.
T Consensus 220 -~~------------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 -YP------------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -CC------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 1234578899999999999999986
No 148
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5e-42 Score=314.29 Aligned_cols=251 Identities=18% Similarity=0.153 Sum_probs=197.1
Q ss_pred CcccccccccCCCceEEEEEEE----CCCceEEEEEecccch----hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCc
Q 018816 61 NYSMRNITIDEIEGYILYMGFL----RDRGPILVMKYRKSVR----YASERCFNNIVFASQM-NHKSILKLIGCCLEAEM 131 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~----~~~~~vaik~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 131 (350)
+|...+.| |+|+||.||++.. .++..||+|.+..... ...+.+.+|+.++.++ +||||+.+++++.+.+.
T Consensus 1 ~y~~~~~l-g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (332)
T cd05614 1 NFELLKVL-GTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK 79 (332)
T ss_pred CceEEEEE-eecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence 46777888 9999999999987 3566899999865321 2345677899999999 49999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence 99999999999999998653 46889999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|..||...... .........+.
T Consensus 152 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~~~~~~~ 224 (332)
T cd05614 152 SKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER------NTQSEVSRRIL 224 (332)
T ss_pred CccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC------CCHHHHHHHHh
Confidence 8765332221 12234589999999998865 4789999999999999999999999743221 11111111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
. .++.+. ...+..+.+++.+||+.||++|| ++.++++
T Consensus 225 ~-----~~~~~~--------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 225 K-----CDPPFP--------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred c-----CCCCCC--------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 111111 12345788999999999999999 6777765
No 149
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.7e-42 Score=312.02 Aligned_cols=240 Identities=18% Similarity=0.168 Sum_probs=193.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.+ .++..||+|.+.... ......+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 2 VL-GKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 45 9999999999999 456689999987642 23345677899999888 699999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 151 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV- 151 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-
Confidence 9999888653 46899999999999999999999 99999999999999999999999999999865322211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
.....+|++.|+|||++.+..++.++|+|||||++|+|++|..||..... ......+..... .+ +
T Consensus 152 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~----------~~~~~~i~~~~~-~~-~-- 216 (318)
T cd05570 152 -TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE----------DELFQSILEDEV-RY-P-- 216 (318)
T ss_pred -cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH----------HHHHHHHHcCCC-CC-C--
Confidence 12334589999999999999999999999999999999999999874321 111111111111 00 0
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM-----IDVAK 340 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~-----~evl~ 340 (350)
...+..+.+|+.+||+.||++|||+ .++++
T Consensus 217 ---------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 ---------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ---------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1334678999999999999999999 77765
No 150
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-41 Score=300.33 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=203.3
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.++|...++| |+|+||.||+|..+++..||+|.+.... .....+.+|+.++++++||||+++++++ ..+..+++|||
T Consensus 5 ~~~~~~~~~i-g~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKL-GAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY 81 (260)
T ss_pred hHHceeeeee-ccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence 3567778888 9999999999999888899999987543 2346788999999999999999999986 45678999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 82 MENGSLVDFLKTPEG---IKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred CCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 999999998865322 46889999999999999999999 999999999999999999999999999998766432
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......++..|+|||++.+..++.++||||||+++|++++ |..||..... ... ...+......
T Consensus 156 ~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~-~~~~~~~~~~-- 222 (260)
T cd05067 156 EYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---------PEV-IQNLERGYRM-- 222 (260)
T ss_pred Ccc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---------HHH-HHHHHcCCCC--
Confidence 221 1122235778999999988889999999999999999999 9999864321 111 1111111110
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+ .. ...+.++.+++.+||..+|++|||+++++..|++
T Consensus 223 -~-~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 -P-RP--------DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -C-CC--------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0 00 1234679999999999999999999999999875
No 151
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.1e-42 Score=320.77 Aligned_cols=251 Identities=16% Similarity=0.093 Sum_probs=194.8
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
.|...+.| |+|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++||||+++++.+.+++..++||
T Consensus 2 ~f~~~~~L-G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTL-GIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEE-EeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 57778888 9999999999999 566689999987543 233456889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~ 152 (382)
T cd05625 81 DYIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (382)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcccc
Confidence 999999999998653 46888999999999999999999 9999999999999999999999999999975321
Q ss_pred CCCc---------------------------------------------cccccccccCCCCCCccccccCCCCccchhH
Q 018816 217 EGKT---------------------------------------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVY 251 (350)
Q Consensus 217 ~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 251 (350)
.... .......+||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (382)
T cd05625 153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 232 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEE
Confidence 1000 0001234589999999999988999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC
Q 018816 252 SFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED 331 (350)
Q Consensus 252 slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~ 331 (350)
||||++|||++|++||...... ......... ......|.. ...++++.+++.+|+ .+|++
T Consensus 233 SlGvil~elltG~~Pf~~~~~~---------~~~~~i~~~-~~~~~~p~~---------~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 233 SVGVILYEMLVGQPPFLAQTPL---------ETQMKVINW-QTSLHIPPQ---------AKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred echHHHHHHHhCCCCCCCCCHH---------HHHHHHHcc-CCCcCCCCc---------ccCCHHHHHHHHHHc-cCHhH
Confidence 9999999999999999753321 111111110 111100100 123456778887776 49999
Q ss_pred CCC---HHHHHH
Q 018816 332 RPT---MIDVAK 340 (350)
Q Consensus 332 RPt---~~evl~ 340 (350)
|++ +.+++.
T Consensus 293 R~~~~~~~ei~~ 304 (382)
T cd05625 293 RLGKNGADEIKA 304 (382)
T ss_pred cCCCCCHHHHhc
Confidence 997 887765
No 152
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-41 Score=300.19 Aligned_cols=255 Identities=22% Similarity=0.303 Sum_probs=205.8
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.++|...+.| |+|++|.||+|..+++..|++|.+.... ...+++.+|+.++++++||||+++++++.+....++||||
T Consensus 5 ~~~~~i~~~i-g~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKL-GAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeee-ccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 4678888888 9999999999999777789999987543 3356789999999999999999999999998999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 83 ~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 83 MSKGSLLDFLKSGEG---KKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred cCCCCHHHHHhcccc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 999999999965422 46899999999999999999999 999999999999999999999999999998766532
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.... ......+..|+|||.+.+..++.++|+||||+++|++++ |+.||..... .... ...........
T Consensus 157 ~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---------~~~~-~~~~~~~~~~~ 225 (261)
T cd05034 157 EYTA-REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---------REVL-EQVERGYRMPR 225 (261)
T ss_pred hhhh-hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHH-HHHHcCCCCCC
Confidence 2111 112224678999999998889999999999999999998 8998853321 1111 11111111000
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+ ...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 226 -~-----------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 -P-----------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -C-----------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0 1234678999999999999999999999999875
No 153
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-41 Score=299.92 Aligned_cols=255 Identities=17% Similarity=0.168 Sum_probs=191.4
Q ss_pred ccccCCCceEEEEEEECC---CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFLRD---RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~---~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||+|...+ ...+++|.+.... ......+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 2 ~l-g~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EI-GNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cC-CccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 35 999999999997632 3367888765432 233456889999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++...........++.....++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999997643222234567888999999999999999 9999999999999999999999999999986543322221
Q ss_pred cccccccCCCCCCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 223 KASTAIGSLEFAAPEYLTT-------GYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
......+++.|+|||++.. ..++.++|||||||++|||++ |..||..... .............
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---------~~~~~~~~~~~~~ 228 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---------EQVLKQVVREQDI 228 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---------HHHHHHHhhccCc
Confidence 2233336778999998743 356889999999999999999 7777764321 1112222222222
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
....+.+. ...+..+.+++..|| .||++|||+.+|++.|.
T Consensus 229 ~~~~~~~~--------~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQLD--------LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCccc--------ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 22222221 134466788999999 59999999999998873
No 154
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.5e-41 Score=300.55 Aligned_cols=257 Identities=21% Similarity=0.264 Sum_probs=204.4
Q ss_pred cCcccccccccCCCceEEEEEEECC----CceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD----RGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~----~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
++|.....| |+|+||.||+|.+.+ ...|++|...... ....+.+.+|+.++++++||||+++++++.+ ...++
T Consensus 6 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 6 EDITLGRCI-GEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhceeeeee-CCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 457777888 999999999999733 2368889887654 3456689999999999999999999998875 55789
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++.... ..+++..+..++.+++.||.||| +.+++|+||||+||+++.++.++|+|||++..
T Consensus 84 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 84 VMELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeee
Confidence 999999999999996532 35899999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
........ .....++..|+|||.+....++.++||||||+++||+++ |..||..... .... ..+....
T Consensus 157 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---------~~~~-~~~~~~~ 225 (270)
T cd05056 157 LEDESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN---------NDVI-GRIENGE 225 (270)
T ss_pred ccccccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH---------HHHH-HHHHcCC
Confidence 64432221 122234568999999988889999999999999999986 9999864321 1111 1122111
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..... ..++..+.+++.+||..+|++|||+.++++.|+++..+
T Consensus 226 ~~~~~------------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 RLPMP------------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cCCCC------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11100 13456799999999999999999999999999998764
No 155
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.9e-41 Score=301.61 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=205.4
Q ss_pred cCcccccccccCCCceEEEEEEECC-Cc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-RG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.+|...+.| |+|+||.||+|.+++ +. .||+|.+.... ......+.+|+.++++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~i-g~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVL-GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEccee-cCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 456667788 999999999999833 32 58888876553 3345678899999999999999999999987 7889
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+++|+|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||.+.
T Consensus 85 ~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 9999999999999986542 45899999999999999999999 8999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............++..|+|||.+....++.++|+||||+++||+++ |..||..... ......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~ 227 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----------VEIPDLLEKG 227 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH----------HHHHHHHhCC
Confidence 7654332222222224678999999988889999999999999999998 9999874321 1122222221
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
......+ .++..+.+++.+||..+|++|||+.++++.|.++.+.+
T Consensus 228 ~~~~~~~------------~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 228 ERLPQPP------------ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CCCCCCC------------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 1111110 23356889999999999999999999999999986643
No 156
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1e-41 Score=309.98 Aligned_cols=239 Identities=21% Similarity=0.191 Sum_probs=190.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.+ .++..||+|.+.... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 2 ML-GKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred ee-eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 45 9999999999999 556689999987642 22345566788888764 899999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA- 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-
Confidence 9999998653 46889999999999999999999 99999999999999999999999999999875322211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+.... ..+.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~----------~~~~~~i~~~~-~~~~--- 216 (316)
T cd05619 152 -KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE----------EELFQSIRMDN-PCYP--- 216 (316)
T ss_pred -ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH----------HHHHHHHHhCC-CCCC---
Confidence 12334589999999999988999999999999999999999999874321 11111121111 1111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI-DVA 339 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~-evl 339 (350)
...+..+.+++.+||+.||++||++. +++
T Consensus 217 ---------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 217 ---------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ---------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 12345688999999999999999997 554
No 157
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9e-42 Score=310.42 Aligned_cols=239 Identities=19% Similarity=0.174 Sum_probs=190.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.+ .++..||+|.+.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 2 ~l-g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 2 VL-GKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 45 9999999999999 456689999987642 12345567788888765 899999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.++|+|||++........
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN- 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-
Confidence 9999988653 46889999999999999999999 99999999999999999999999999999874322111
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+.... +..
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~----------~~~~~~~~~~~-----~~~ 215 (316)
T cd05620 152 -RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE----------DELFESIRVDT-----PHY 215 (316)
T ss_pred -ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----------HHHHHHHHhCC-----CCC
Confidence 22345589999999999999999999999999999999999999974321 11111111111 111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI-DVA 339 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~-evl 339 (350)
. ...+.++.+++.+||+.||++||++. +++
T Consensus 216 ~--------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 P--------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred C--------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 02345788999999999999999985 554
No 158
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.8e-41 Score=298.14 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=197.3
Q ss_pred ccccCCCceEEEEEEE-CCC---ceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDR---GPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~---~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|++ ..+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~i-g~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 2 EL-GHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred cc-CccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 45 9999999999987 222 5899999876543 34567889999999999999999999876 4568999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| ..+++|+||||+||+++.++.+||+|||.+.........
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999654 36889999999999999999999 899999999999999999999999999998766443322
Q ss_pred cc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 222 IK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 222 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
.. .....++..|+|||.+.+..++.++||||||+++|++++ |..||..... ......+....... .+
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----------~~~~~~~~~~~~~~-~~ 220 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----------AEVIAMLESGERLP-RP 220 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----------HHHHHHHHcCCcCC-CC
Confidence 11 112224568999999988889999999999999999998 9999864321 11122222211110 00
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
...+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 221 -----------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 -----------EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 134467899999999999999999999999999875
No 159
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-41 Score=306.94 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=204.6
Q ss_pred cCcccccccccCCCceEEEEEEEC--------CCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR--------DRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEA 129 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~--------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 129 (350)
++|...+.| |+|+||.||++... ....||+|.+.... ......+.+|+.++.++ +||||+++++++.+.
T Consensus 12 ~~~~~~~~l-g~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPL-GEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeee-cCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 567778888 99999999999752 23468888876542 23456788999999999 699999999999998
Q ss_pred CcCeEEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
...+++|||+++++|.+++..... .....+++..+..++.|++.||.||| +.+++|+||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 999999999999999999865321 01135889999999999999999999 9999999999999999
Q ss_pred CCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCC
Q 018816 199 QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGS 277 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~ 277 (350)
+.++.+||+|||.++...............++..|+|||++.+..++.++||||||+++|+|++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~----- 242 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV----- 242 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999986643322211222224567999999988889999999999999999999 8888754321
Q ss_pred cchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
................ ..++.++.+++.+||+.+|++|||+.++++.|+++..
T Consensus 243 -----~~~~~~~~~~~~~~~~------------~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 243 -----EELFKLLREGHRMDKP------------SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -----HHHHHHHHcCCCCCCC------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111222211110000 1334578899999999999999999999999999864
No 160
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-41 Score=299.16 Aligned_cols=252 Identities=18% Similarity=0.191 Sum_probs=201.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-----hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-----YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++|...+.| |+|++|.||++.. .++..|++|.+..... .....+.+|+.++++++||||+++++++.+.+..+
T Consensus 2 ~~~~~~~~l-g~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLL-GQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS 80 (263)
T ss_pred Cccccccee-cCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence 578888888 9999999999998 5677999998764321 22356889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+|+||+++++|.+++... ..++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.
T Consensus 81 ~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~ 152 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASK 152 (263)
T ss_pred EEEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 999999999999988653 46889999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCcccc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
.......... .....++..|+|||++.+..++.++||||||+++|+|++|+.||..... ...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~ 223 (263)
T cd06625 153 RLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---------MAAIFKIATQP 223 (263)
T ss_pred eccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---------HHHHHHHhccC
Confidence 6543221111 1233478899999999998899999999999999999999999864321 01111111110
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. +.+. ...+..+.+++.+||..+|++|||+.++++.
T Consensus 224 ~~----~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 TN----PQLP--------SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CC----CCCC--------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11 1111 1345678999999999999999999999864
No 161
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.1e-41 Score=298.74 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=199.2
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeee-cCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCL-EAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~ 138 (350)
.+|...+.| |+|+||.||++...+. .|++|.+... ...+.+.+|+.++++++|+|++++++++. +++..+++|||
T Consensus 6 ~~~~~~~~l-g~g~~~~v~~~~~~~~-~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTI-GKGEFGDVMLGDYRGN-KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeee-cccCCCeEEEEEEcCC-cEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 467777888 9999999999988754 8999988654 23467889999999999999999999764 55678999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 82 MAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 999999999865321 35889999999999999999999 999999999999999999999999999998754332
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
. ....++..|+|||++.+..++.++|||||||++|+|++ |+.||..... . .....+........
T Consensus 156 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---------~-~~~~~~~~~~~~~~ 220 (256)
T cd05082 156 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---------K-DVVPRVEKGYKMDA 220 (256)
T ss_pred C-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---------H-HHHHHHhcCCCCCC
Confidence 2 12235678999999988889999999999999999997 8888763211 1 11111221111110
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
. ..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 221 ~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 P------------DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred C------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0 13456789999999999999999999999999864
No 162
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.6e-41 Score=302.02 Aligned_cols=250 Identities=17% Similarity=0.260 Sum_probs=197.3
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+|...+.| |+|+||.||+|.+ .++..||+|.+... .......+.+|+.++.+++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~l-g~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEIL-GHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeee-ccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 56667778 9999999999998 66678999988654 233456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|..+ ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 81 MDGGSLDVY---------RKIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred CCCCChHHh---------hcCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999998654 24678889999999999999999 999999999999999999999999999998765432
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
. .....++..|+|||++.+..++.++|+||||+++|+|++|..||......... .............. .
T Consensus 149 ~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~----~ 217 (279)
T cd06619 149 I----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS---LMPLQLLQCIVDED----P 217 (279)
T ss_pred c----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc---cchHHHHHHHhccC----C
Confidence 2 22345899999999999889999999999999999999999998653221000 00111111111111 1
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
+.+.. ...+.++.+++.+||+.+|++||++.++++.
T Consensus 218 ~~~~~-------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 218 PVLPV-------GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCC-------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11100 1234578999999999999999999999864
No 163
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.1e-41 Score=296.61 Aligned_cols=247 Identities=21% Similarity=0.307 Sum_probs=199.2
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchh
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~ 145 (350)
.| |.|++|.||++.+.++..|++|.+...... ....+.+|+.++++++||||+++++++.+....++||||+++++|.
T Consensus 2 ~l-g~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 2 KI-GKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred cc-ccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 45 999999999999966889999988765433 5567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccccc
Q 018816 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKAS 225 (350)
Q Consensus 146 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 225 (350)
+++.... ..+++.....++.+++.||.||| +++++|+||+|+||+++.++.++|+|||.+.............
T Consensus 81 ~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 81 TFLRKKK----NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9986532 45789999999999999999999 9999999999999999999999999999987654322221212
Q ss_pred ccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 226 TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 226 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....+..|+|||.+.++.++.++|+||||+++|+|++ |..||..... ......+.... ....
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~----------~~~~~~~~~~~-~~~~------ 216 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN----------QQTRERIESGY-RMPA------ 216 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH----------HHHHHHHhcCC-CCCC------
Confidence 2234667999999988899999999999999999999 7887754321 11111121111 0000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 217 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 217 -----PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -----CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0144568999999999999999999999999986
No 164
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.1e-42 Score=320.96 Aligned_cols=253 Identities=16% Similarity=0.083 Sum_probs=196.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. .++..||+|.+..... .....+.+|+.++.+++||||+++++.+.+++.+++|
T Consensus 1 ~~y~~~~~l-G~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTI-GIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEE-EeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 367888888 9999999999998 5667999999865422 2345678999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..++...+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+|..+
T Consensus 80 ~E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 80 MDYIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (376)
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence 9999999999998653 46788899999999999999999 999999999999999999999999999997533
Q ss_pred CCCCc-----------------------------------------cccccccccCCCCCCccccccCCCCccchhHHHH
Q 018816 216 PEGKT-----------------------------------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254 (350)
Q Consensus 216 ~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 254 (350)
..... .......+||+.|+|||++.+..++.++||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 231 (376)
T cd05598 152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 231 (376)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecc
Confidence 11000 0001134699999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-
Q 018816 255 KLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP- 333 (350)
Q Consensus 255 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP- 333 (350)
|++|||++|+.||...... ...... .........+.. ...+..+.+++.+|+ .+|.+|+
T Consensus 232 vilyell~G~~Pf~~~~~~---------~~~~~i-~~~~~~~~~~~~---------~~~s~~~~~li~~l~-~~p~~R~~ 291 (376)
T cd05598 232 VILYEMLVGQPPFLADTPA---------ETQLKV-INWETTLHIPSQ---------AKLSREASDLILRLC-CGAEDRLG 291 (376)
T ss_pred ceeeehhhCCCCCCCCCHH---------HHHHHH-hccCccccCCCC---------CCCCHHHHHHHHHHh-cCHhhcCC
Confidence 9999999999999754321 111111 110101000100 123456778888876 4999999
Q ss_pred --CHHHHHHH
Q 018816 334 --TMIDVAKK 341 (350)
Q Consensus 334 --t~~evl~~ 341 (350)
|+.+++..
T Consensus 292 ~~t~~ell~h 301 (376)
T cd05598 292 KNGADEIKAH 301 (376)
T ss_pred CCCHHHHhCC
Confidence 88988753
No 165
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.3e-41 Score=299.40 Aligned_cols=256 Identities=17% Similarity=0.226 Sum_probs=203.4
Q ss_pred cCcccccccccCCCceEEEEEEEC-CC---ceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DR---GPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~---~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
++|...+.| |+|+||.||+|.+. ++ ..+|+|.+.... ....+.+.+|+.++.+++||||+++++++.+++..++
T Consensus 4 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVI-GAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeee-cccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 567778888 99999999999873 22 268898886542 2345678899999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.+..
T Consensus 83 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 999999999999986532 46889999999999999999999 99999999999999999999999999999987
Q ss_pred CCCCCcccc-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 215 IPEGKTHIK-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 215 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
......... .....++..|+|||++.+..++.++|+||||+++|++++ |..||..... . .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~------~----~~~~~~~~~ 225 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN------Q----DVIKAIEEG 225 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH------H----HHHHHHhCC
Confidence 644322111 111223568999999998889999999999999999886 9999864321 0 111111111
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
. .. +.. ...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 226 ~-~~--~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 Y-RL--PAP---------MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C-cC--CCC---------CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 1 00 100 13346789999999999999999999999999876
No 166
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.1e-41 Score=297.76 Aligned_cols=251 Identities=25% Similarity=0.358 Sum_probs=202.9
Q ss_pred ccccCCCceEEEEEEECC----CceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFLRD----RGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~----~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.... +..|++|.+...... ..+.+.+|+..+..++|+||+++++++.+....++||||+++
T Consensus 2 ~i-g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 2 KL-GEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred cc-ccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 45 999999999999943 669999998765433 367788999999999999999999999999999999999999
Q ss_pred CchhhhhhCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 142 CTLADRLYGPLQT----HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 142 ~sL~~~l~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
++|.+++...... ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998764211 0156899999999999999999999 99999999999999999999999999999987765
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
...........+++.|+|||.+....++.++||||||+++|+|++ |..||..... ..............
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----------~~~~~~~~~~~~~~ 227 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----------EEVLEYLRKGYRLP 227 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHHcCCCCC
Confidence 432222334447889999999988889999999999999999999 5888875421 11122222111110
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
.+ ...+.++.+++.+||+.+|++|||+.++++.|+
T Consensus 228 -~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 -KP-----------EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -CC-----------ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00 134568999999999999999999999999874
No 167
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.9e-42 Score=302.85 Aligned_cols=256 Identities=19% Similarity=0.235 Sum_probs=201.9
Q ss_pred HHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 55 LKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 55 l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++.+++++.....| |+|+||.||+|.+ .++..|++|.+........+.+.+|+.++++++|+||+++++++..++..+
T Consensus 3 ~~~~~~~~~~~~~l-g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVL-GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccccCCceEEE-ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 44566777777777 9999999999998 566689999987765556678999999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEcccC
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPL--LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDFS 210 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg 210 (350)
+|+||+++++|.+++.... ..+ +...+..++.||+.||.||| +.+|+|+||||+||+++. ++.++|+|||
T Consensus 82 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred EEEecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecch
Confidence 9999999999999987532 234 78888999999999999999 999999999999999986 6789999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY--YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
.+........ ......+++.|+|||++.+.. ++.++|+||||+++|+|++|..||...... ... ....
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~------~~~--~~~~ 224 (268)
T cd06624 155 TSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP------QAA--MFKV 224 (268)
T ss_pred hheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh------hhh--Hhhh
Confidence 9876533221 122234789999999987654 789999999999999999999998643210 000 0000
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. ....+.+ +....+.+.+++.+||+.+|++|||+.+++.
T Consensus 225 ---~~-~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 225 ---GM-FKIHPEI--------PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---hh-hccCCCC--------CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 0001111 1134567899999999999999999999986
No 168
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.4e-42 Score=313.48 Aligned_cols=236 Identities=19% Similarity=0.170 Sum_probs=188.0
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHH-HHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.+ .++..||+|.+..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 2 ~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 2 VI-GKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 45 9999999999999 5677999999865422 22344555555 56789999999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|..++... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (323)
T cd05575 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK- 151 (323)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-
Confidence 9999988653 46889999999999999999999 99999999999999999999999999999875422211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ........ ... ..+.+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---------~~~~~~i~-~~~-~~~~~-- 217 (323)
T cd05575 152 -TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---------AEMYDNIL-NKP-LRLKP-- 217 (323)
T ss_pred -ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---------HHHHHHHH-cCC-CCCCC--
Confidence 22344589999999999998999999999999999999999999874321 11111111 111 11111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ 336 (350)
..+..+.+++.+||+.||++||++.
T Consensus 218 ----------~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 ----------NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----------CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 2346788999999999999999985
No 169
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7e-42 Score=300.73 Aligned_cols=252 Identities=19% Similarity=0.172 Sum_probs=202.0
Q ss_pred cCcccccccccCCCceEEEEEEECC-CceEEEEEecccchh---hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-RGPILVMKYRKSVRY---ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-~~~vaik~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
+.|.....| |.|.-|+||++.+.+ +..+|+|.+.+..-. ...+...|-+||+.++||.++.+|+.++.+...|++
T Consensus 77 ~~f~llk~L-G~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRL-GCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHc-CCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 345566778 999999999999944 468999999876433 234567899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||||+||+|..+.+.... +.+++..+..++.+|+-||+||| -.|||+|||||+||||-++|++-|+||.++...
T Consensus 156 meyCpGGdL~~LrqkQp~---~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPG---KRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EecCCCccHHHHHhhCCC---CccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999998876544 67999999999999999999999 999999999999999999999999999987433
Q ss_pred CCC--------------------------------C-c---------------------cccccccccCCCCCCcccccc
Q 018816 216 PEG--------------------------------K-T---------------------HIKASTAIGSLEFAAPEYLTT 241 (350)
Q Consensus 216 ~~~--------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~ 241 (350)
... . . .......+||..|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 210 0 0 001223569999999999999
Q ss_pred CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHH
Q 018816 242 GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELA 321 (350)
Q Consensus 242 ~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 321 (350)
...+.++|+|+|||++|||+.|..||...... ..+.+.+.+.. .+.+. ...+..+.+||
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~---------~Tl~NIv~~~l------~Fp~~------~~vs~~akDLI 368 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK---------ETLRNIVGQPL------KFPEE------PEVSSAAKDLI 368 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCch---------hhHHHHhcCCC------cCCCC------CcchhHHHHHH
Confidence 99999999999999999999999999865431 11122222111 11111 14567899999
Q ss_pred HHccccCCCCCCC----HHHHH
Q 018816 322 FKCLSHSAEDRPT----MIDVA 339 (350)
Q Consensus 322 ~~cl~~~P~~RPt----~~evl 339 (350)
++.|..||++|.- +.||-
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred HHHhccChhhhhccccchHHhh
Confidence 9999999999987 66654
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-41 Score=307.07 Aligned_cols=249 Identities=19% Similarity=0.251 Sum_probs=202.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.+|...+.| |+|++|.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++.+.++...++||||
T Consensus 20 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEe-cCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 567777888 9999999999998 56779999998766555567788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.. ..+++.++..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 99 LAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999854 35789999999999999999999 999999999999999999999999999998765432
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...... ......... ..
T Consensus 170 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~---------~~~~~~~~~-~~---- 233 (296)
T cd06654 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---------RALYLIATN-GT---- 233 (296)
T ss_pred cc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH---------HhHHHHhcC-CC----
Confidence 21 122335889999999998888999999999999999999999998643210 011111111 11
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+.. +...+..+.+++.+||..+|++|||+.+++.
T Consensus 234 ~~~~~------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 234 PELQN------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCCC------ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00100 1144567899999999999999999999987
No 171
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-41 Score=310.95 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=193.0
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 135 (350)
+|.....| |+|+||.||+|.. .++..||+|.+..... ...+.+..|..++..+ .|++|+.+++++.+.+..++|
T Consensus 1 df~~~~~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVL-GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEE-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 47777888 9999999999999 4566899999875422 2334567788888877 589999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 80 MEYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred EcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 9999999999988653 46889999999999999999999 999999999999999999999999999998754
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. ....+......
T Consensus 152 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---------~~-~~~~i~~~~~~ 219 (323)
T cd05616 152 MWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DE-LFQSIMEHNVA 219 (323)
T ss_pred CCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---------HH-HHHHHHhCCCC
Confidence 32211 12344589999999999999999999999999999999999999974321 11 11111111110
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
+. ...+.++.+++.+||+.+|++|++.
T Consensus 220 -~p------------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 -YP------------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -CC------------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 00 1334678999999999999999984
No 172
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.8e-42 Score=317.12 Aligned_cols=265 Identities=17% Similarity=0.206 Sum_probs=197.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----cC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----MP 132 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 132 (350)
+|+..+.| |+|+||.||++.+ .++..||+|++... .....+++.+|+.+++.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPI-GYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCccccee-eeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 46777888 9999999999998 67779999998643 2234567889999999999999999999998776 78
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
++||||+. ++|.+.+... ..+++..+..++.||+.||.||| +.+++||||||+|||++.++.+||+|||++
T Consensus 80 ~lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccce
Confidence 99999996 6788777543 46899999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcchH-
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNFFI- 281 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~~~- 281 (350)
......... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||....... +......
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 229 (372)
T cd07853 151 RVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229 (372)
T ss_pred eecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 765432221 12233478999999998874 47999999999999999999999997543210 0000000
Q ss_pred ---HHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 282 ---TDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 282 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.......+...... .+....... .....++++.+|+.+||+.||++|||+.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 230 RSACEGARAHILRGPHK--PPSLPVLYT--LSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHhhHHHHHHHHhCCCC--CCchHHhcc--cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00011111111100 000000000 00123567899999999999999999999986
No 173
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.7e-41 Score=298.95 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=195.8
Q ss_pred ccccCCCceEEEEEEECC-Cc--eEEEEEeccc-chhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFLRD-RG--PILVMKYRKS-VRYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~-~~--~vaik~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
+| |+|+||.||+|.+.+ +. .+++|.+... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 2 ~l-g~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VI-GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cC-CCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 45 999999999999843 33 4678877643 234456788999999999 799999999999999999999999999
Q ss_pred CchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 142 CTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 142 ~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
++|.+++..... .....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 999999864321 11135789999999999999999999 8999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
++...... ........+..|+|||++....++.++|+|||||++|||++ |..||..... ... ....
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---------~~~-~~~~ 224 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---------AEL-YEKL 224 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---------HHH-HHHH
Confidence 98532211 11112224567999999988889999999999999999997 9999864321 111 1111
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.... ..+ . +...+..+.+++.+||+.+|.+|||+.+++..|+++..
T Consensus 225 ~~~~--~~~--~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~ 270 (270)
T cd05047 225 PQGY--RLE--K--------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 270 (270)
T ss_pred hCCC--CCC--C--------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence 1110 000 0 01234578899999999999999999999999998863
No 174
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-44 Score=293.48 Aligned_cols=251 Identities=18% Similarity=0.210 Sum_probs=207.4
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++.|+..++| |+|.|+.||++.. ..+..+|+|.++.. ...+.+++.+|+.|-+.|+||||+++.+.+.+....++|
T Consensus 10 ~d~y~l~e~i-gkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEEL-GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHH-ccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3566777788 9999999999998 66778888887543 234567899999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC---CCceeEcccCCC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE---EYAAKLFDFSLS 212 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~ 212 (350)
+|++.|++|..-|-.. .-+++..+-+...||+.+|.|+| .++|||||+||+|+++.+ ...+||+|||+|
T Consensus 89 Fe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred EecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceE
Confidence 9999999997766433 35788889999999999999999 999999999999999954 455899999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
.....+. .....+|||+|||||++...+|+..+|||+.||++|-|+.|.+||.... ...+...+..+
T Consensus 161 i~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~----------~~rlye~I~~g 227 (355)
T KOG0033|consen 161 IEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----------QHRLYEQIKAG 227 (355)
T ss_pred EEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc----------HHHHHHHHhcc
Confidence 8876332 3455669999999999999999999999999999999999999997532 22333444444
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+..-.|.+. ..+++..+|+++||..||++|.|+.|.|.
T Consensus 228 ~yd~~~~~w~---------~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 228 AYDYPSPEWD---------TVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ccCCCCcccC---------cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 4444333331 45678899999999999999999999875
No 175
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-41 Score=305.35 Aligned_cols=259 Identities=15% Similarity=0.205 Sum_probs=199.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|+||.||++.+ .++..+|+|.+.... ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus 1 ~~~~~~~~l-g~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGEL-GAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeec-cCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 468888888 9999999999998 455567777775442 2344668899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++... ..+++..+..++.|++.||.||| + .+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 y~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 80 HMDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred ccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 99999999998654 46889999999999999999999 6 589999999999999999999999999986553
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
... .....++..|+|||++.+..++.++|+||||+++|+|++|..||...... . ....+.......
T Consensus 152 ~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~------~----~~~~~~~~~~~~ 217 (308)
T cd06615 152 DSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK------E----LEAMFGRPVSEG 217 (308)
T ss_pred ccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh------h----HHHhhcCccccc
Confidence 221 22345889999999998888999999999999999999999998643211 0 000000000000
Q ss_pred c-------------------------CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 297 I-------------------------DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 297 ~-------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
. +.......+.......+.++.+++.+||+.+|++|||+.+|+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00000000000001245679999999999999999999999875
No 176
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=310.90 Aligned_cols=252 Identities=21% Similarity=0.221 Sum_probs=210.5
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh---hHHHHHHHHHHHHhcC-CCCccceeeeeecCCcC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY---ASERCFNNIVFASQMN-HKSILKLIGCCLEAEMP 132 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 132 (350)
....|...+.| |.|.||.||+++. .++..+|+|.+.+.... ..+.+.+|+.+|++++ |||||.+.+.+++....
T Consensus 33 ~~~~Y~l~~~l-G~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 33 IKEKYELGREL-GRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred ccccEEehhhh-CCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 34567777788 9999999999999 45889999999776442 3468999999999998 99999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC----CceeEcc
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE----YAAKLFD 208 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~----~~~kl~D 208 (350)
++|||++.||.|.+.+... .+++..+..++.|++.++.||| +.+++||||||+|+|+... +.+|++|
T Consensus 112 ~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred EEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEee
Confidence 9999999999999999654 2899999999999999999999 9999999999999999643 5799999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||...... .....
T Consensus 183 FGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~----------~~~~~ 249 (382)
T KOG0032|consen 183 FGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF----------EIFLA 249 (382)
T ss_pred CCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh----------HHHHH
Confidence 999998766 22355667999999999999999999999999999999999999999854321 01112
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
+..+.....++.+ +..+..+.+++..|+..||..|+|+.++++.
T Consensus 250 i~~~~~~f~~~~w---------~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 250 ILRGDFDFTSEPW---------DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHcCCCCCCCCCc---------cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 3333332222222 2557789999999999999999999999974
No 177
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.4e-41 Score=296.97 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=193.1
Q ss_pred ccccCCCceEEEEEEEC----CCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeee-cCCcCeEEeecCC
Q 018816 67 ITIDEIEGYILYMGFLR----DRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCL-EAEMPALVYEPAG 140 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~----~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 140 (350)
.| |+|+||.||+|.+. +...||+|.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 2 ~l-g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 2 VI-GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred cc-cccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 45 99999999999872 23478999885432 344567889999999999999999999876 4556899999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
+++|.+++.... ...++.....++.|++.||.||| +.+++|+||||+|||++.++.+||+|||++........
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999986532 34677888999999999999999 99999999999999999999999999999876543221
Q ss_pred c--ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 221 H--IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG-RTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 221 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
. .......++..|+|||.+.+..++.++|||||||++|||++| .+||..... . .. ............
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~---~~-~~~~~~~~~~~~ 223 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS------F---DI-TVYLLQGRRLLQ 223 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH------H---HH-HHHHhcCCCCCC
Confidence 1 111122357789999999888899999999999999999995 455542211 1 11 111111111000
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
+ ...+..+.+++.+||+.+|++||++.+|++.|+++..
T Consensus 224 -~-----------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 -P-----------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -C-----------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0 1234678999999999999999999999999999864
No 178
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-43 Score=323.40 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=203.3
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchh
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLA 145 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~ 145 (350)
+| |+|.||+||-|++ .+...+|||-+.........-+..|+.+.++|+|.|||+++|.|.+++.+-|.||-++||||.
T Consensus 582 VL-GKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VL-GKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred Ee-ecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 45 9999999999999 555688999997776666677899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEcccCCCccCCCCCccc
Q 018816 146 DRLYGPLQTHLEPL--LLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 146 ~~l~~~~~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+++.... +++ .+...-.+..||+.||.||| .+.|||||||-+|||++. .|.+||+|||-++....-..
T Consensus 661 sLLrskW----GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP-- 731 (1226)
T KOG4279|consen 661 SLLRSKW----GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP-- 731 (1226)
T ss_pred HHHHhcc----CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCc--
Confidence 9997543 667 78888899999999999999 999999999999999974 78999999999987754333
Q ss_pred cccccccCCCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 223 KASTAIGSLEFAAPEYLTTGY--YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.+.+..||..|||||++..++ |..++|||||||++.||.||++||...... ..+ .++-+-+. ..|.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---------qAA--MFkVGmyK-vHP~ 799 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---------QAA--MFKVGMYK-VHPP 799 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh---------hHh--hhhhccee-cCCC
Confidence 355667999999999998764 899999999999999999999999865331 000 01111111 1121
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
-+++.+.+...++.+|+.+||.+||++.+++.
T Consensus 800 --------iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 --------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred --------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 13578889999999999999999999999985
No 179
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9.8e-42 Score=313.67 Aligned_cols=264 Identities=16% Similarity=0.274 Sum_probs=203.4
Q ss_pred cCcccccccccCCCceEEEEEEE------CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecC-C
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEA-E 130 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 130 (350)
++|...+.| |+|+||.||+|.+ .++..||+|.+.... ......+.+|+.++.++ +||||+++++++... .
T Consensus 7 ~~~~~~~~l-G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPL-GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccc-cCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 467888888 9999999999974 345689999987543 23345688999999999 689999999988654 4
Q ss_pred cCeEEeecCCCCchhhhhhCCCCC--------------------------------------------------------
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQT-------------------------------------------------------- 154 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~-------------------------------------------------------- 154 (350)
..+++|||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999998642110
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccc
Q 018816 155 ------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAI 228 (350)
Q Consensus 155 ------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 228 (350)
....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 0023678888999999999999999 9999999999999999999999999999987654332222222333
Q ss_pred cCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCc
Q 018816 229 GSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSC 307 (350)
Q Consensus 229 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (350)
+++.|+|||++.+..++.++||||||+++|+|++ |..||..... ............... .+.
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~-~~~------- 305 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---------DEEFCRRLKEGTRMR-APD------- 305 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc---------cHHHHHHHhccCCCC-CCC-------
Confidence 5678999999988889999999999999999997 8888764321 011111121111110 010
Q ss_pred cchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 308 FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 308 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
..++.+.+++..||+.+|++|||+.+|++.|+.+.+.
T Consensus 306 ----~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 306 ----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1235689999999999999999999999999999765
No 180
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-41 Score=301.49 Aligned_cols=265 Identities=19% Similarity=0.193 Sum_probs=202.5
Q ss_pred cCcccccccccCCCceEEEEEEE-----CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--Cc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-----RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EM 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-----~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 131 (350)
..|...+.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++||||+++.+++.+. ..
T Consensus 4 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceec-CCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 345666777 9999999999984 345689999986543 33456788999999999999999999998875 57
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcc
Confidence 899999999999999986432 35899999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccc-cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccC------CCCcchHHHH
Q 018816 212 SKSIPEGKTHI-KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT------GGSNFFITDR 284 (350)
Q Consensus 212 ~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~------~~~~~~~~~~ 284 (350)
+.......... ......++..|+|||++.+..++.++|||||||++|+|+++..|........ ...... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 234 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT-VTR 234 (284)
T ss_pred ccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccccc-HHH
Confidence 88664432211 1223446778999999988889999999999999999999877643211100 000001 111
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.......+..... +..++..+.+|+.+||+.+|++|||+.++++.|+++
T Consensus 235 ~~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 235 LVRVLEEGKRLPR------------PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHcCccCCC------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111111000 013456899999999999999999999999999986
No 181
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-41 Score=309.78 Aligned_cols=242 Identities=17% Similarity=0.144 Sum_probs=191.5
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++.++ +||||+.+++++.+.+..++||||+++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 2 VI-GRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 45 9999999999999 566689999987542 23345678899999888 599999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|..++... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 151 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD- 151 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-
Confidence 9999888643 46899999999999999999999 99999999999999999999999999999875322111
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||...... ................... +.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~-~p--- 223 (327)
T cd05617 152 -TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDN---PDMNTEDYLFQVILEKPIR-IP--- 223 (327)
T ss_pred -ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCC---cccccHHHHHHHHHhCCCC-CC---
Confidence 123455899999999999999999999999999999999999999643221 1111122222222221111 11
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
...+..+.+++.+||+.||++||++
T Consensus 224 ---------~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 ---------RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred ---------CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 1234568899999999999999985
No 182
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.1e-41 Score=313.47 Aligned_cols=269 Identities=18% Similarity=0.217 Sum_probs=197.7
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCC----
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAE---- 130 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 130 (350)
..++|...+.| |+|+||.||++.+ ..+..||+|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPI-GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEe-ecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 45789988998 9999999999998 56779999998643 2234567889999999999999999999986543
Q ss_pred --cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 131 --MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 131 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
..++||||+++ +|.+.+. ..++...+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh-------ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEec
Confidence 46999999964 6666553 34788889999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcc
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNF 279 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~ 279 (350)
||++....... ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||....... +....
T Consensus 167 fg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 167 FGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred CCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 99987543222 1223458999999999999899999999999999999999999997543210 00000
Q ss_pred hHHH----HHHHHHHhcC-CCcc-----CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 280 FITD----RVEKFIRSNG-YMNI-----DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 280 ~~~~----~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.... .......... .... .+.+............++.+.+|+.+||+.||++|||+.|++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 1111111111 0000 00000000000001234678999999999999999999999873
No 183
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.7e-41 Score=304.63 Aligned_cols=257 Identities=18% Similarity=0.283 Sum_probs=201.3
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCc----eEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRG----PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~----~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
++|...+.| |+|+||.||+|.+ .++. .||+|.+..... ....++.+|+.+++.++||||++++++|... ..+
T Consensus 7 ~~~~~~~~l-g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVL-GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceecccc-ccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456667777 9999999999998 3333 468888765432 3344688999999999999999999998754 467
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+++||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eeehhcCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccc
Confidence 9999999999999986532 46889999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...............++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~----------~~~~~~~~~~~ 227 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP----------TREIPDLLEKG 227 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC----------HHHHHHHHHCC
Confidence 7654332222223335778999999988889999999999999999997 888876321 11122222222
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
..... + ..++..+.+++..||..+|++||++.++++.|+++.+
T Consensus 228 ~~~~~-~-----------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 228 ERLPQ-P-----------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCCCC-C-----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11110 0 0234578899999999999999999999999998754
No 184
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-41 Score=315.96 Aligned_cols=260 Identities=17% Similarity=0.157 Sum_probs=201.8
Q ss_pred HHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeee
Q 018816 52 SEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCL 127 (350)
Q Consensus 52 ~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 127 (350)
..++....++|...+.| |+|+||.||++.+ .++..||+|.+.... ......+.+|+.+++.++||||+++++.+.
T Consensus 35 ~~~~~~~~~~y~i~~~l-G~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 35 IRDLRMKAEDYEVVKVI-GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred HhhcCcchhhcEEEEEE-eecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 34455566899999999 9999999999999 556688899886432 123455778999999999999999999999
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
+++..++||||+++|+|.+++.. ..++...+..++.||+.||.||| +++|+||||||+|||++.++.+||+
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999998854 35788889999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..||..... ..
T Consensus 185 DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~ 254 (371)
T cd05622 185 DFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---------VG 254 (371)
T ss_pred eCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH---------HH
Confidence 99999866432221 22345699999999998753 378999999999999999999999974321 11
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED--RPTMIDVAKK 341 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~evl~~ 341 (350)
........ .....-+.. ...+..+.+++..||..++.+ ||++.++++.
T Consensus 255 ~~~~i~~~-~~~~~~~~~---------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 255 TYSKIMNH-KNSLTFPDD---------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HHHHHHcC-CCcccCCCc---------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11222111 111000100 134567889999999844433 7899988874
No 185
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-41 Score=295.00 Aligned_cols=268 Identities=16% Similarity=0.158 Sum_probs=201.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh--hHHHHHHHHHHHHhcCCCC-ccceeeeeecCC-----
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY--ASERCFNNIVFASQMNHKS-ILKLIGCCLEAE----- 130 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~----- 130 (350)
..|...++| |+|+||+||+|+. .++..||+|++.-.... .-....+|+.+++.|+|+| |+.+++++.+.+
T Consensus 11 ~~~~~~ekl-GeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKL-GEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHh-CCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345555667 9999999999999 66679999998765432 2345679999999999999 999999998877
Q ss_pred -cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEccc
Q 018816 131 -MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 131 -~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
.+++|+||++ -+|..++....... ..++...+..++.||+.||+||| +++|+||||||.||||+++|.+||+||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeecc
Confidence 7899999995 69999987643211 24666889999999999999999 999999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
|+|+...-+.. .....++|..|.|||++.+. .|+...||||+|||++||+++++.|..... ..........
T Consensus 165 GlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se------~~ql~~If~~ 236 (323)
T KOG0594|consen 165 GLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE------IDQLFRIFRL 236 (323)
T ss_pred chHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH------HHHHHHHHHH
Confidence 99986653322 23445689999999999987 699999999999999999999999886543 2222222222
Q ss_pred HHhcCCCcc-----CccccCCCCccc-h----HH---HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 289 IRSNGYMNI-----DPVIVGDRSCFR-K----EE---KLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 289 ~~~~~~~~~-----~~~~~~~~~~~~-~----~~---~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
+........ -+.....+.... + .. ......+++.+||+++|.+|.|+..++..
T Consensus 237 lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 237 LGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 221110000 011110000000 0 01 11378899999999999999999999875
No 186
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-41 Score=300.15 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=199.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|...+.| |+|+||.||+|+. .++..||+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRI-GSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHh-CCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 466777778 9999999999998 56778999988665444456688999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++... +.+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 88 CGGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999988643 56899999999999999999999 899999999999999999999999999998765332
Q ss_pred CccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
. .......|+..|+|||++. ...++.++|+|||||++|+|++|..||...... ....... ...
T Consensus 160 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~---------~~~~~~~-~~~-- 225 (267)
T cd06645 160 I--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM---------RALFLMT-KSN-- 225 (267)
T ss_pred c--cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch---------hhHHhhh-ccC--
Confidence 1 1223345899999999874 456889999999999999999999998643221 0001110 001
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+..... ...+..+.+++.+||+.+|++|||+.+|++
T Consensus 226 ~~~~~~~~~------~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 226 FQPPKLKDK------MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCCccccc------CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 001111100 023456889999999999999999999875
No 187
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.9e-41 Score=296.60 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=203.7
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.++|...+.| |+|+||.||++...++..+++|.+.... ...+.+.+|+.++++++|+||+++++++.+ ...+++|||
T Consensus 5 ~~~~~~~~~l-g~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKL-GAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEe-cCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 3567888888 9999999999998777789999876543 345678899999999999999999999887 778999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.+||+|||.+......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 82 MAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred CCCCcHHHHHHhCCc---cccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 999999999865321 45788999999999999999999 899999999999999999999999999998765433
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......++..|+|||++....++.++|+|||||++|++++ |..||..... ......+......
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----------~~~~~~~~~~~~~-- 222 (260)
T cd05073 156 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN----------PEVIRALERGYRM-- 222 (260)
T ss_pred Ccc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHhCCCCC--
Confidence 221 1122235678999999988889999999999999999998 8888864321 0111111111100
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
+. ....+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 223 -~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 -PR---------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred -CC---------cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 00 013446789999999999999999999999999753
No 188
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.2e-41 Score=297.40 Aligned_cols=252 Identities=20% Similarity=0.339 Sum_probs=201.3
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
.+|+....| |+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~i-g~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEI-GSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeee-cCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 456777788 9999999999998766789999886543 23457889999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.... ..+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 82 EHGCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 9999999986532 45789999999999999999999 8999999999999999999999999999987654322
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||++.++.++.++|+||||+++|||++ |..||..... .......... .....
T Consensus 155 ~~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~-~~~~~ 222 (256)
T cd05112 155 YT-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN----------SEVVETINAG-FRLYK 222 (256)
T ss_pred cc-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH----------HHHHHHHhCC-CCCCC
Confidence 11 1112225678999999998889999999999999999998 8998864321 1111111111 11111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
+. ..+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 223 ~~-----------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 PR-----------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CC-----------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11 22467899999999999999999999999873
No 189
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-41 Score=304.67 Aligned_cols=249 Identities=19% Similarity=0.253 Sum_probs=203.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|...+.| |+|++|.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~y~~~~~l-g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKI-GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeee-ccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 677888888 9999999999998 67779999998765555567788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 98 ~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 98 LAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 999999999854 35788999999999999999999 999999999999999999999999999998765433
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....+++.|+|||.+.+..++.++|+|||||++|++++|..||....... .... ......
T Consensus 169 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~---------~~~~-~~~~~~---- 232 (297)
T cd06656 169 QSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---------ALYL-IATNGT---- 232 (297)
T ss_pred ccC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch---------heee-eccCCC----
Confidence 211 223348889999999998889999999999999999999999986432210 0000 000000
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+... .+...+..+.+++.+||+.+|++|||+.+|++
T Consensus 233 ~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 233 PELQ------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCC------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 01244567889999999999999999999987
No 190
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.2e-42 Score=323.12 Aligned_cols=264 Identities=17% Similarity=0.187 Sum_probs=191.3
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecC-------
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEA------- 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 129 (350)
...+|...+.| |+|+||.||+|.. ..+..||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~L-G~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 64 PNKSYKLGNII-GNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred cCCeEEEeEEE-EeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 34679999998 9999999999999 566799999986542 2244799999999999999998876432
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLF 207 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~ 207 (350)
..+++||||++ ++|.+++...... ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++ .+||+
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYARN-NHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeee
Confidence 24678999997 4776666432111 156899999999999999999999 99999999999999999665 69999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
|||+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|.+||...... .......
T Consensus 214 DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~------~~~~~i~ 284 (440)
T PTZ00036 214 DFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV------DQLVRII 284 (440)
T ss_pred ccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHH
Confidence 9999986643322 2234589999999998764 6899999999999999999999999754321 1000010
Q ss_pred HHHHhc----------CCC-ccCcccc-CCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 KFIRSN----------GYM-NIDPVIV-GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 ~~~~~~----------~~~-~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...... ... ..-+... .......+...+.++.+|+.+||+.||.+|||+.++++
T Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 285 QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000000 000 0000000 00000001123467899999999999999999999985
No 191
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.5e-42 Score=311.52 Aligned_cols=240 Identities=19% Similarity=0.175 Sum_probs=188.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHH-HHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||++.+ .++..||+|.+..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 2 ~l-g~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 2 VI-GKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred ee-eeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 45 9999999999999 4566899999865421 22234444544 56788999999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+....+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~- 151 (325)
T cd05602 81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG- 151 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-
Confidence 9999988653 46788889999999999999999 99999999999999999999999999999875432211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|.+||..... ......... .. ....+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~-~~-~~~~~-- 217 (325)
T cd05602 152 -TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---------AEMYDNILN-KP-LQLKP-- 217 (325)
T ss_pred -CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---------HHHHHHHHh-CC-cCCCC--
Confidence 23344599999999999999999999999999999999999999974322 111111111 11 11111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..+..+.+++.+||+.||.+||++.+.+.
T Consensus 218 ----------~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 218 ----------NITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ----------CCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 33467899999999999999999875443
No 192
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.7e-41 Score=296.89 Aligned_cols=250 Identities=17% Similarity=0.171 Sum_probs=201.5
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+|...+.| |+|+||.||++.. .++..+|+|.+... .....+.+.+|+.+++.++||||+++++.+.+.+.++++|||
T Consensus 1 ~y~~~~~l-g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVV-GEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEe-eccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 46677788 9999999999999 56778999988543 234456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++..... ..++......++.|++.||.||| +.+++|+||+|+||+++.++.++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 80 CDGGDLMQKIKLQRG---KLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred CCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 999999998854321 45789999999999999999999 999999999999999999999999999998765432
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......+++.|+|||++.+..++.++|+||||+++|+|++|..||..... ...... +..+....+.
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~---------~~~~~~-~~~~~~~~~~ 221 (255)
T cd08219 154 GA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW---------KNLILK-VCQGSYKPLP 221 (255)
T ss_pred cc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH---------HHHHHH-HhcCCCCCCC
Confidence 22 12234588999999999888899999999999999999999999874321 111111 1111111111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+..+.+++.+||+.||++|||+.+|+.+
T Consensus 222 ------------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 ------------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1334568899999999999999999999864
No 193
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2e-40 Score=294.63 Aligned_cols=254 Identities=16% Similarity=0.137 Sum_probs=190.8
Q ss_pred ccccCCCceEEEEEEECCCc---eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 67 ITIDEIEGYILYMGFLRDRG---PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~---~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
.| |+|+||.||+|...++. .+++|.+.... ....+.+.+|+.+++.++||||+++++.|.+....++||||++++
T Consensus 2 ~l-g~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EI-GNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cC-CCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 35 99999999999863332 45666665433 234567999999999999999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
+|.+++...... ....+......++.||+.||.||| +.+++|+||||+|||++.++.++|+|||++..........
T Consensus 81 ~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 81 DLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred cHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999998753211 135677788899999999999999 8999999999999999999999999999876432222111
Q ss_pred cccccccCCCCCCcccccc-------CCCCccchhHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 223 KASTAIGSLEFAAPEYLTT-------GYYNEKTDVYSFGKLLLVLLTG-RTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
......++..|+|||++.. ..++.++|||||||++|||+++ ..||..... .............
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---------~~~~~~~~~~~~~ 227 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---------REVLNHVIKDQQV 227 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHhhccc
Confidence 2233457889999998753 2457899999999999999974 666653221 2222233333333
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
...++.+.. ...+.+.+++..|| .+|++||++.+|++.|.
T Consensus 228 ~~~~~~~~~--------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQLEL--------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCccCC--------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 333443322 23356788999999 67999999999998874
No 194
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.7e-42 Score=315.77 Aligned_cols=252 Identities=15% Similarity=0.140 Sum_probs=196.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++.+++||||+++++.+.+.+..++|
T Consensus 1 ~~f~~~~~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVI-GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEE-eeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 467788888 9999999999999 566789999986542 23345678899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..++...+..++.|++.||.||| +.+|+||||||+|||++.++.++|+|||++...
T Consensus 80 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 80 MEFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred EeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 9999999999998653 46899999999999999999999 999999999999999999999999999998654
Q ss_pred CCCCcc---------------------------------ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh
Q 018816 216 PEGKTH---------------------------------IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT 262 (350)
Q Consensus 216 ~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 262 (350)
...... ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t 231 (360)
T cd05627 152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (360)
T ss_pred ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc
Confidence 321100 00113469999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC---HHHHH
Q 018816 263 GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT---MIDVA 339 (350)
Q Consensus 263 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~evl 339 (350)
|..||..... ...............+.+.. ..+.++.+|+.+|+. ||.+|++ +.+++
T Consensus 232 G~~Pf~~~~~---------~~~~~~i~~~~~~~~~p~~~----------~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~ 291 (360)
T cd05627 232 GYPPFCSETP---------QETYRKVMNWKETLVFPPEV----------PISEKAKDLILRFCT-DSENRIGSNGVEEIK 291 (360)
T ss_pred CCCCCCCCCH---------HHHHHHHHcCCCceecCCCC----------CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHh
Confidence 9999975432 11111111100111111110 234567888888774 9999985 56665
Q ss_pred H
Q 018816 340 K 340 (350)
Q Consensus 340 ~ 340 (350)
.
T Consensus 292 ~ 292 (360)
T cd05627 292 S 292 (360)
T ss_pred c
Confidence 4
No 195
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.1e-41 Score=302.49 Aligned_cols=250 Identities=16% Similarity=0.191 Sum_probs=198.3
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|+..+.| |+|+||.||++.. .++..||+|.+..... .....+.+|+.++++++|+||+.+++.+.+.+..++|||
T Consensus 2 f~~~~~i-g~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVL-GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEe-ecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 5666777 9999999999999 5667999999865421 223457789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 81 LMNGGDLKFHIYHMGE---AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred ecCCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 9999999998854321 35889999999999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... .....|+..|+|||++.+..++.++|+|||||++|+|++|..||...... ...............
T Consensus 155 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~------~~~~~~~~~~~~~~~--- 222 (285)
T cd05630 155 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK------IKREEVERLVKEVQE--- 222 (285)
T ss_pred Ccc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc------chHHHHHhhhhhhhh---
Confidence 221 12335899999999999889999999999999999999999999753210 001111111111000
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~ 340 (350)
... ...+..+.+|+.+||+.||++||| +.++++
T Consensus 223 --~~~--------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 --EYS--------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --hcC--------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 000 133456889999999999999999 888887
No 196
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.3e-42 Score=311.36 Aligned_cols=237 Identities=20% Similarity=0.138 Sum_probs=191.3
Q ss_pred ccccCCCceEEEEEEE----CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 67 ITIDEIEGYILYMGFL----RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~----~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
.| |+|+||.||++.. .++..||+|.+..... .....+.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus 3 ~l-g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 3 VL-GQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ee-eeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 46 9999999999986 3567899999875432 234557789999999999999999999999999999999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
+++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999998653 46899999999999999999999 99999999999999999999999999999876543221
Q ss_pred cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .... ..+...... +.
T Consensus 154 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---------~~~~-~~i~~~~~~-~p-- 218 (318)
T cd05582 154 --KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---------KETM-TMILKAKLG-MP-- 218 (318)
T ss_pred --ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---------HHHH-HHHHcCCCC-CC--
Confidence 12334589999999999988899999999999999999999999874321 1111 111111110 00
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~e 337 (350)
...+..+.+|+.+||+.||++||++.+
T Consensus 219 ----------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 ----------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ----------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 133467889999999999999999544
No 197
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.2e-41 Score=334.50 Aligned_cols=264 Identities=17% Similarity=0.199 Sum_probs=205.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+|.+ .++..||+|++.... ....+++.+|+.++++++||||+++++++.+++..++|
T Consensus 2 grYeIi~~L-GkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLI-GKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEE-ecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 578888888 9999999999999 567799999986532 23356789999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEccc
Q 018816 136 YEPAGYCTLADRLYGPLQ------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
|||+++++|.+++..... ......++..++.++.||+.||.||| +.+|+||||||+||+++.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEec
Confidence 999999999998864211 01134667788999999999999999 999999999999999999999999999
Q ss_pred CCCccCCCCCc----------------cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccc
Q 018816 210 SLSKSIPEGKT----------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLA 273 (350)
Q Consensus 210 g~~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 273 (350)
|++........ .......+||+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99976521110 00112346999999999999999999999999999999999999998642210
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhh
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-TMIDVAKKLRQMYR 347 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-t~~evl~~L~~~~~ 347 (350)
.. ... ....++.-... ....+..+.+++.+||+.||++|| +++++++.|+...+
T Consensus 238 ------ki-------~~~--~~i~~P~~~~p-----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 238 ------KI-------SYR--DVILSPIEVAP-----YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred ------hh-------hhh--hhccChhhccc-----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00 000 00001100000 013456788999999999999996 67888888887755
No 198
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-41 Score=315.82 Aligned_cols=262 Identities=19% Similarity=0.222 Sum_probs=198.9
Q ss_pred hcCcccccccccCCCceEEEEEEEC---CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR---DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~---~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
...|.....| |.|+||.||++... .+..|++|.+... ....+|+.++++++||||+++++++......++|
T Consensus 91 ~~~y~i~~~L-g~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSL-TPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEee-cCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 3568888998 99999999999863 3457888887643 2356899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||++. ++|.+++... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.++|+|||++...
T Consensus 165 ~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred ehhcC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 99995 6888888432 57899999999999999999999 999999999999999999999999999999766
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC-
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY- 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (350)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+.
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS------SSSQLRSIIRCMQVH 309 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC------cHHHHHHHHHHhccC
Confidence 54433223334569999999999999999999999999999999999999987543311 00111111110000
Q ss_pred -Ccc---------------CccccCCCC---ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 -MNI---------------DPVIVGDRS---CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 -~~~---------------~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
... ......... .......+.++.+++.+||+.||++|||+.+++..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 310 PLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 000000000 00001234578899999999999999999999863
No 199
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.9e-41 Score=299.00 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=197.7
Q ss_pred ccccCCCceEEEEEEECCC-------ceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 67 ITIDEIEGYILYMGFLRDR-------GPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~-------~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.| |+|+||.||+|+..+. ..+++|.+.... ......+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~l-g~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FL-GSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred cc-ccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 35 9999999999998432 368888876543 23456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-----ceeEcccCC
Q 018816 139 AGYCTLADRLYGPLQT--HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-----AAKLFDFSL 211 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-----~~kl~Dfg~ 211 (350)
+++++|.+++...... ....+++..++.++.|++.||.||| +.+++|+||+|+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999998653211 1134788999999999999999999 89999999999999999887 899999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
+................++..|+|||++.++.++.++|||||||++|+|++ |..||..... .. ....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---------~~-~~~~~~ 227 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---------QE-VLQHVT 227 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---------HH-HHHHHh
Confidence 876543332222223346788999999999999999999999999999998 9998863321 11 111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
....... +...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 228 ~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRLQK------------PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCccCC------------cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1110000 01445678999999999999999999999999874
No 200
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1e-40 Score=295.57 Aligned_cols=238 Identities=22% Similarity=0.294 Sum_probs=187.9
Q ss_pred ccccCCCceEEEEEEECCC-------------ceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 67 ITIDEIEGYILYMGFLRDR-------------GPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~-------------~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
.| |+|+||.||+|+..+. ..|++|.+..........+.+|+.++..++||||+++++++.+....+
T Consensus 2 ~l-g~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 2 HL-GRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred cc-ccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 35 9999999999986322 258888877655555567889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc-------eeE
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA-------AKL 206 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~-------~kl 206 (350)
+||||+++++|..++.... ..+++..++.++.||+.||.||| +++|+||||||+|||++.++. +++
T Consensus 81 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 9999999999998876432 46899999999999999999999 999999999999999987664 899
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCccccc-cCCCCccchhHHHHHHHHHHH-hCCCCCCCCcccCCCCcchHHHH
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLL-TGRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~-tg~~p~~~~~~~~~~~~~~~~~~ 284 (350)
+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..|+...... .
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----------~ 217 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA----------E 217 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh----------H
Confidence 999988654322 2234788999999887 456899999999999999998 577776532210 0
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
..... ........ .....+.+|+.+||+.||++||++.+|++.|
T Consensus 218 ~~~~~-~~~~~~~~-------------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 218 KERFY-EGQCMLVT-------------PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHH-hcCccCCC-------------CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11111 11111111 2235688999999999999999999999876
No 201
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-41 Score=302.44 Aligned_cols=249 Identities=18% Similarity=0.261 Sum_probs=203.3
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.+|+....| |.|++|.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++++.+.+..++|+||
T Consensus 19 ~~y~~~~~l-g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKI-GQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEE-ecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 457888888 9999999999998 66779999998765555567788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|..++.. ..+++.++..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 98 ~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 98 LAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred cCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999998854 35889999999999999999999 999999999999999999999999999998765433
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... .... .........
T Consensus 169 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~---------~~~~-~~~~~~~~~-- 234 (296)
T cd06655 169 QSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---------RALY-LIATNGTPE-- 234 (296)
T ss_pred ccc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHH-HHHhcCCcc--
Confidence 221 22334888999999999888999999999999999999999998743220 1111 111111111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+... ...+..+.+++.+||..||++|||+.+++.
T Consensus 235 --~~~~------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 --LQNP------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --cCCc------ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 1000 134567889999999999999999999986
No 202
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-41 Score=318.15 Aligned_cols=265 Identities=15% Similarity=0.147 Sum_probs=197.4
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
...|.....| |+|+||.||++.+ ..+..||+|.... ..+.+|+.++++++|+||+++++++......++|||
T Consensus 168 ~~gy~i~~~L-g~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRAL-TPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEE-ccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3468888888 9999999999999 5566899986432 235689999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
++. ++|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.++|+|||+++....
T Consensus 241 ~~~-~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 241 KYR-SDLYTYLGARL----RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred ccC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 995 78888875432 46899999999999999999999 99999999999999999999999999999976543
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC--C
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY--M 295 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 295 (350)
...........||+.|+|||++.+..++.++|||||||++|||++|..|+........... ....+...+..... .
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~--~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRP--YDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCC--cHHHHHHHHHhhccccc
Confidence 3222122234599999999999999999999999999999999998876544322111111 11111111111110 0
Q ss_pred cc--------------------CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 296 NI--------------------DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 296 ~~--------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.+ .+........ ........+.+|+.+||+.||.+|||+.|+|+.
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWT-RYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchh-hhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0000000000 000223468899999999999999999999874
No 203
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.5e-41 Score=299.84 Aligned_cols=249 Identities=18% Similarity=0.186 Sum_probs=196.6
Q ss_pred cccccccccCCCceEEEEEEEC-CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 62 YSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
|+....| |+|+||.||+|... ++..+++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||++
T Consensus 7 ~~i~~~l-g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGEL-GDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhc-ccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3445667 99999999999994 455778888866555556778899999999999999999999999999999999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
+++|..++.... .++++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 86 ~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 86 GGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 999998875432 46899999999999999999999 99999999999999999999999999999876533221
Q ss_pred cccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 221 HIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 221 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
......+++.|+|||++. +..++.++|+|||||++|+|++|.+||..... ..............
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~ 227 (282)
T cd06643 159 --RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---------MRVLLKIAKSEPPT 227 (282)
T ss_pred --ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---------HHHHHHHhhcCCCC
Confidence 123345889999999884 34578899999999999999999999864321 11111111111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+ ...+..+.+++.+||+.+|++|||+.++++
T Consensus 228 ~~~~-----------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 228 LAQP-----------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CCCc-----------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 134567899999999999999999999875
No 204
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.1e-41 Score=346.23 Aligned_cols=272 Identities=25% Similarity=0.311 Sum_probs=211.8
Q ss_pred cccHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeee
Q 018816 49 SFSSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCL 127 (350)
Q Consensus 49 ~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 127 (350)
.++.+++. ..|...++| |+|+||.||+|.. .++..||+|++...... ...|+..+++++|||||+++++|.
T Consensus 682 ~~~~~~~~---~~~~~~~~i-g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~ 753 (968)
T PLN00113 682 SITINDIL---SSLKEENVI-SRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCR 753 (968)
T ss_pred hhhHHHHH---hhCCcccEE-ccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEE
Confidence 35555543 457777788 9999999999998 67779999998654321 234688999999999999999999
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
+.+..++||||+++|+|.+++. .++|..+..++.|++.||+|||+.++.+|+||||||+||+++.++.+++.
T Consensus 754 ~~~~~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~ 825 (968)
T PLN00113 754 SEKGAYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR 825 (968)
T ss_pred cCCCCEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE
Confidence 9999999999999999999983 47899999999999999999997667799999999999999999888775
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
||.+..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||+.... .......+...
T Consensus 826 -~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~----~~~~~~~~~~~ 894 (968)
T PLN00113 826 -LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG----VHGSIVEWARY 894 (968)
T ss_pred -ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC----CCCcHHHHHHH
Confidence 555433211 1122488999999999999999999999999999999999999853221 12233444433
Q ss_pred HHHhcC-CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 288 FIRSNG-YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 288 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
...... ...+|+.+...... +.....++.+++.+||+.||++||||.+|++.|+++.+++
T Consensus 895 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 895 CYSDCHLDMWIDPSIRGDVSV--NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred hcCccchhheeCccccCCCCc--cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 332222 23345554333221 1255667899999999999999999999999999997743
No 205
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.3e-41 Score=300.52 Aligned_cols=250 Identities=15% Similarity=0.162 Sum_probs=197.4
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|...+.| |+|+||+||+|.+ .++..||+|.+..... .....+.+|+.++++++|+||+.+.+.+.+++..++|||
T Consensus 2 ~~~~~~l-g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVL-GKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEE-ecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 5556677 9999999999999 5677899999865421 223457789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 81 IMNGGDLKFHIYNMGN---PGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred eccCccHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 9999999988864321 46899999999999999999999 99999999999999999999999999999876533
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... .....|+..|+|||++.+..++.++|+|||||++|+|++|..||..... ..........+.... ...
T Consensus 155 ~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~------~~~~~~~~~~~~~~~-~~~ 224 (285)
T cd05632 155 GES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE------KVKREEVDRRVLETE-EVY 224 (285)
T ss_pred CCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhhhccc-ccc
Confidence 221 2234589999999999988999999999999999999999999874322 111111111111111 010
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~ 340 (350)
. ...+..+.+|+..||+.||++||+ +.+++.
T Consensus 225 ~------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 225 S------------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred C------------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0 133457889999999999999999 667766
No 206
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.2e-41 Score=300.75 Aligned_cols=238 Identities=21% Similarity=0.238 Sum_probs=186.9
Q ss_pred ccccCCCceEEEEEEECC-------------------------CceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccc
Q 018816 67 ITIDEIEGYILYMGFLRD-------------------------RGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILK 121 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~-------------------------~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 121 (350)
.| |+|+||.||+|.... ...|++|.+..........+.+|+.++++++||||++
T Consensus 2 ~l-G~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HL-GQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred Cc-CcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence 35 999999999998621 1258888887655455567889999999999999999
Q ss_pred eeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 122 LIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 122 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
++++|.+....++||||+++++|..++.... ..+++..++.++.||+.||.||| +++|+||||||+||+++..
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEecc
Confidence 9999999999999999999999999886432 46889999999999999999999 9999999999999999764
Q ss_pred C-------ceeEcccCCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHH-hCCCCCCCCcc
Q 018816 202 Y-------AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLL-TGRTIGHLSRL 272 (350)
Q Consensus 202 ~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~-tg~~p~~~~~~ 272 (350)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|..||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 3 3799999987644221 12237788999998876 46899999999999999995 68888764321
Q ss_pred cCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 273 ATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
. . ......... .. + . .....+.+++.+||+.+|++|||+.+|++.|
T Consensus 228 ~------~----~~~~~~~~~-~~--~---~--------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 S------E----KERFYEKKH-RL--P---E--------PSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred H------H----HHHHHHhcc-CC--C---C--------CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 0 1 111111110 00 0 0 1224688999999999999999999999887
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.1e-41 Score=299.50 Aligned_cols=266 Identities=20% Similarity=0.237 Sum_probs=204.9
Q ss_pred CcccccccccCCCceEEEEEEEC-----CCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeec--CCcC
Q 018816 61 NYSMRNITIDEIEGYILYMGFLR-----DRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLE--AEMP 132 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~-----~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 132 (350)
+|...+.| |+|+||.||++.+. .+..||+|.+...... ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 5 ~~~~~~~i-g~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQL-GEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheee-ccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45566777 99999999999973 3568999998765443 46779999999999999999999999887 5588
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
+++|||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.+
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999996542 35899999999999999999999 899999999999999999999999999999
Q ss_pred ccCCCCCccc-cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC-----CcchHHHHHH
Q 018816 213 KSIPEGKTHI-KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG-----SNFFITDRVE 286 (350)
Q Consensus 213 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~ 286 (350)
.......... ......++..|+|||.+.+..++.++|+||||++++||++|..|+......... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8765332211 111223566799999998888999999999999999999999987643211000 0000111111
Q ss_pred HHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
........... +..++.++.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 237 ~~~~~~~~~~~------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 237 ELLKEGERLPR------------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHHcCCcCCC------------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 11111110000 0134467999999999999999999999999999863
No 208
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.4e-41 Score=306.78 Aligned_cols=241 Identities=14% Similarity=0.149 Sum_probs=192.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 135 (350)
+|+..+.| |+|+||.||++.. .++..||+|.+.... ....+.+..|..++..+. |++|+.+++++.+.+..++|
T Consensus 1 ~f~~~~~l-g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVL-GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEE-EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 46667788 9999999999998 567789999987542 233456778899998886 57788899999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 80 MEYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 9999999999988653 46899999999999999999999 999999999999999999999999999998754
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ..... .+......
T Consensus 152 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---------~~~~~-~i~~~~~~ 219 (323)
T cd05615 152 MVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---------DELFQ-SIMEHNVS 219 (323)
T ss_pred CCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHH-HHHhCCCC
Confidence 32221 12334589999999999988999999999999999999999999874321 11111 11111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
. | ...+..+.+++.+||+.+|++|++.
T Consensus 220 ~--p-----------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 Y--P-----------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred C--C-----------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0 0 1334578899999999999999984
No 209
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1e-41 Score=311.39 Aligned_cols=239 Identities=17% Similarity=0.158 Sum_probs=189.0
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHH-HHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|+||.||++.. .++..||+|.+..... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 2 ~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 2 VI-GKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred ce-eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 45 9999999999998 5677999999865421 23345556655 46778999999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|..++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 151 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD- 151 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-
Confidence 9999888643 56899999999999999999999 99999999999999999999999999999875422211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......... . ...+.+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---------~~~~~~~~~-~-~~~~~~-- 217 (325)
T cd05604 152 -TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---------AEMYDNILH-K-PLVLRP-- 217 (325)
T ss_pred -CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---------HHHHHHHHc-C-CccCCC--
Confidence 22344589999999999999999999999999999999999999874321 111111111 1 111111
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVA 339 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl 339 (350)
..+..+.+++.+||+.+|.+||++.+.+
T Consensus 218 ----------~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 218 ----------GASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred ----------CCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 2345688999999999999999886433
No 210
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.8e-41 Score=295.57 Aligned_cols=249 Identities=21% Similarity=0.263 Sum_probs=202.6
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|+....| |+|++|.||+|... ++..|++|.+..... .+.+.+|+.++++++||||+++++++.+....++++||
T Consensus 3 ~~y~~~~~i-~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKL-GEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhh-cCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 567888888 99999999999994 467899999866532 67899999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 80 CGAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred CCCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 99999999986432 56899999999999999999999 999999999999999999999999999998876443
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||++.+..++.++||||||+++|+|++|+.||...... .. .........
T Consensus 153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~---------~~-~~~~~~~~~---- 216 (256)
T cd06612 153 MA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM---------RA-IFMIPNKPP---- 216 (256)
T ss_pred cc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh---------hh-hhhhccCCC----
Confidence 21 122334788999999998888999999999999999999999998743221 00 000000000
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+.. +...+..+.+++.+||+.+|++|||+.+|+.
T Consensus 217 ~~~~~------~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 PTLSD------PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCCc------hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00000 1134567899999999999999999999986
No 211
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.5e-41 Score=294.85 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=198.7
Q ss_pred ccccCCCceEEEEEEECC--Cc--eEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFLRD--RG--PILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~--~~--~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|++|.||+|.+.+ +. .||+|.+..... ...+.+.+|+.++++++||||+++++++.+ ...++||||+++
T Consensus 2 ~i-g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 2 KL-GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred cC-CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 45 999999999999832 22 589999877655 556789999999999999999999999988 889999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++..... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 999999876421 36899999999999999999999 999999999999999999999999999999876543221
Q ss_pred c-cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 222 I-KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 222 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
. ......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ..... ...........+
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~-~~~~~~~~~~~~ 223 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---------SQILK-KIDKEGERLERP 223 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---------HHHHH-HHHhcCCcCCCC
Confidence 1 1223346789999999998899999999999999999998 9999864321 11111 111111110000
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 224 -----------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 -----------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 134567999999999999999999999999875
No 212
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.1e-41 Score=306.53 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=204.8
Q ss_pred cCcccccccccCCCceEEEEEEEC--------CCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR--------DRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEA 129 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~--------~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 129 (350)
.+|...+.| |+|+||.||++... ....||+|.+.... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 12 ~~~~i~~~i-g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPL-GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeeccee-ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 467778888 99999999999862 12268899876542 23456788999999999 799999999999999
Q ss_pred CcCeEEeecCCCCchhhhhhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQ-----------THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
+..++++||+++++|.+++..... .....+++..++.++.|++.||.||| .++++|+||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEE
Confidence 999999999999999999864321 01135788999999999999999999 9999999999999999
Q ss_pred CCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCC
Q 018816 199 QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGS 277 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~ 277 (350)
+.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----- 242 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----- 242 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-----
Confidence 9999999999999876544322222222334578999999998899999999999999999998 7888754321
Q ss_pred cchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.. ....+......... ...+..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 243 ----~~-~~~~~~~~~~~~~~------------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 243 ----EE-LFKLLKEGHRMDKP------------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred ----HH-HHHHHHcCCCCCCC------------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 11 11122211111100 1334678899999999999999999999999999874
No 213
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=298.56 Aligned_cols=248 Identities=20% Similarity=0.242 Sum_probs=208.3
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
|+....| |+|+||.||++.+ ..|..||||++... .+..++..|+.++.+.+.|++|++||.+.....+++|||||.
T Consensus 35 FDi~~KL-GEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKL-GEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHh-cCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 5556678 9999999999999 56667788887655 446789999999999999999999999999999999999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
.|++.+.++.++ .++++.++..++...+.||+||| ...-+|||||..|||++.+|++||+|||.+-.+...
T Consensus 112 AGSiSDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-- 182 (502)
T KOG0574|consen 112 AGSISDIMRARR----KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-- 182 (502)
T ss_pred CCcHHHHHHHhc----CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhh--
Confidence 999999987654 68999999999999999999999 888999999999999999999999999999766432
Q ss_pred cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.....+..|||.|||||++..-.|+.++||||||++..||..|++||..-++..... .+. ....|.
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF----------MIP----T~PPPT 248 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF----------MIP----TKPPPT 248 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE----------ecc----CCCCCC
Confidence 223556779999999999999999999999999999999999999998766531110 000 001111
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
+ ..++..+.++.+++.+||-.+|++|.|+..+++.
T Consensus 249 F------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 F------KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred C------CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1 1235778899999999999999999999998863
No 214
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.6e-41 Score=304.85 Aligned_cols=264 Identities=17% Similarity=0.174 Sum_probs=197.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|+||.||+|+. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKL-GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEe-cccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 567788888 9999999999998 4566899999864432 233467789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++ +|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 85 YLDK-DLKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred CCCC-CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 9974 8888775432 35789999999999999999999 99999999999999999999999999999876433
Q ss_pred CCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH----------
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE---------- 286 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 286 (350)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|++||...... .......
T Consensus 157 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 228 (309)
T cd07872 157 PTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE------DELHLIFRLLGTPTEET 228 (309)
T ss_pred Ccc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCCHHH
Confidence 221 1223347899999998865 46899999999999999999999999754321 0000000
Q ss_pred -HHHHhcC-CCcc-CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 -KFIRSNG-YMNI-DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 -~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+.... .... .+..............+.++.+|+.+||+.||.+|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 229 WPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000 0000 0000000000000134567889999999999999999999987
No 215
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.3e-41 Score=299.58 Aligned_cols=252 Identities=19% Similarity=0.178 Sum_probs=202.3
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|...+.| |.|++|.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 5 ~~~~i~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 5 DIWEIIGEL-GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hHHHHHHHh-cCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 457777788 9999999999998 56678999998766556667889999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.... ..+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|||.+......
T Consensus 84 ~~~~~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 84 CDGGALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred cCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 99999999886532 46899999999999999999999 999999999999999999999999999988655332
Q ss_pred CccccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
.. ......+++.|+|||++. ...++.++|+||||+++|+|++|..||..... ...... +....
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---------~~~~~~-~~~~~ 224 (280)
T cd06611 157 LQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---------MRVLLK-ILKSE 224 (280)
T ss_pred cc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---------HHHHHH-HhcCC
Confidence 21 122345889999999875 34577899999999999999999999874321 111111 11111
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+.. +...+..+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 225 PPTLDQ----------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCCcCC----------cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111110 01344678899999999999999999999874
No 216
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.3e-40 Score=294.25 Aligned_cols=253 Identities=21% Similarity=0.231 Sum_probs=203.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|.....| |+|++|.||+|.. .++..+++|.+........+.+.+|+.++++++||||+++++++.+....+++|||
T Consensus 3 ~~~~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRI-GSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEe-cCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 567788888 9999999999999 55668999998766555667889999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.... ..++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 82 CGGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred CCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 99999999886532 46889999999999999999999 999999999999999999999999999998765432
Q ss_pred CccccccccccCCCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTG---YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.. ......++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... .... ........
T Consensus 155 ~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~---------~~~~-~~~~~~~~ 222 (262)
T cd06613 155 IA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM---------RALF-LISKSNFP 222 (262)
T ss_pred hh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH---------HHHH-HHHhccCC
Confidence 21 12234578899999998776 7899999999999999999999998743321 0001 11111100
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+.+.. ....+..+.+++.+||+.+|++|||+.+|+.
T Consensus 223 --~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 --PPKLKD------KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --Cccccc------hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111110 1245678999999999999999999999875
No 217
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.6e-40 Score=302.35 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=159.8
Q ss_pred cccccCCCceEEEEEEEC---CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCcCeEEeecCC
Q 018816 66 NITIDEIEGYILYMGFLR---DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLE--AEMPALVYEPAG 140 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~---~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 140 (350)
..| |+|+||+||+|... ++..||+|.+.... ....+.+|+.++++++||||+++++++.. +...+++|||++
T Consensus 7 ~~l-G~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKV-GRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccc-ccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 456 99999999999974 45689999986542 23457789999999999999999998864 456789999995
Q ss_pred CCchhhhhhCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe----CCCCceeEcccCCC
Q 018816 141 YCTLADRLYGPLQ----THLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF----QEEYAAKLFDFSLS 212 (350)
Q Consensus 141 ~~sL~~~l~~~~~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~ 212 (350)
++|.+++..... .....++...+..++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 588877643211 11135889999999999999999999 9999999999999999 45678999999999
Q ss_pred ccCCCCCcc-ccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 018816 213 KSIPEGKTH-IKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271 (350)
Q Consensus 213 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~ 271 (350)
......... .......+|+.|+|||++.+. .++.++||||+||++|+|++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 876433211 122344589999999998774 58999999999999999999999997543
No 218
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-41 Score=307.67 Aligned_cols=236 Identities=20% Similarity=0.191 Sum_probs=186.4
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHH-HHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIV-FASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
+| |+|+||.||+|++ .++..||+|.+..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 2 ~l-g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 2 VI-GKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred ee-eeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 45 9999999999999 5667899999865421 22344555554 67889999999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|...+... ..++...+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE- 151 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-
Confidence 9999888643 46888999999999999999999 99999999999999999999999999999875322211
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... ........ ... ..+.+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~-~~~-~~~~~-- 217 (321)
T cd05603 152 -TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---------SQMYDNIL-HKP-LQLPG-- 217 (321)
T ss_pred -ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---------HHHHHHHh-cCC-CCCCC--
Confidence 22344589999999999988899999999999999999999999874321 11111111 111 01110
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ 336 (350)
..+..+.+++.+||+.||.+||++.
T Consensus 218 ----------~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 ----------GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ----------CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 2345788999999999999999864
No 219
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2e-40 Score=298.29 Aligned_cols=251 Identities=16% Similarity=0.140 Sum_probs=199.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+.|...+.| |.|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 12 ~~y~i~~~l-g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGEL-GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhhee-cCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 456777788 9999999999999 55678899998776656677888999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|..++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 91 ~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 91 CPGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred CCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 99999988775432 46889999999999999999999 999999999999999999999999999988654322
Q ss_pred CccccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
.. ......+++.|+|||++. ...++.++|+|||||++|+|++|.+||..... ............
T Consensus 164 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~~ 232 (292)
T cd06644 164 LQ--RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLKIAKSEP 232 (292)
T ss_pred cc--ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---------HHHHHHHhcCCC
Confidence 11 122334788999999885 34578899999999999999999999864321 111111111100
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..... +...+..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 PTLSQ-----------PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ccCCC-----------CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11000 0134457889999999999999999999976
No 220
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.4e-41 Score=299.07 Aligned_cols=248 Identities=23% Similarity=0.255 Sum_probs=201.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|+....| |.|++|.||+|.+ .++..|++|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+|
T Consensus 1 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECI-GKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred Chhhhhhhh-cCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 356777788 9999999999999 566789999886543 3345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 80 YCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred eeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 9999999999864 36889999999999999999999 99999999999999999999999999999977654
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......+++.|+|||++.+..++.++|+||||+++|+|++|..||..... ......+.....
T Consensus 151 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~----------~~~~~~~~~~~~--- 215 (274)
T cd06609 151 TMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP----------MRVLFLIPKNNP--- 215 (274)
T ss_pred ccc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch----------HHHHHHhhhcCC---
Confidence 321 12334578899999999988899999999999999999999999864321 011111111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+... ..+..+.+++.+||+.+|++|||+.+++.
T Consensus 216 -~~~~~~-------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 216 -PSLEGN-------KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -CCCccc-------ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111100 14467889999999999999999999976
No 221
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.7e-40 Score=294.54 Aligned_cols=248 Identities=19% Similarity=0.251 Sum_probs=197.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccchh---------hHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY---------ASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
|.....| |+|++|.||+|.. .++..||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 2 ~~~~~~i-g~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALI-GSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred cccccee-ecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4556677 9999999999998 56678999988643221 22567899999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCC
Confidence 99999999999999999653 46889999999999999999999 89999999999999999999999999999
Q ss_pred CccCCCCCccc----cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 212 SKSIPEGKTHI----KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 212 ~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
++......... ......++..|+|||.+.+..++.++|+|||||++|+|++|..||..... ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~ 223 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---------LQAIFK 223 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---------HHHHHH
Confidence 87665321111 11223478899999999988899999999999999999999999874321 011111
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ... ..+.+. ...+..+.+++.+||+.||++||++.+|++
T Consensus 224 ~-~~~----~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 224 I-GEN----ASPEIP--------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred H-hcc----CCCcCC--------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1 111 111111 134567899999999999999999999986
No 222
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.8e-40 Score=292.66 Aligned_cols=251 Identities=20% Similarity=0.218 Sum_probs=204.0
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+..+.| |.|+||.||.+.. .++..+++|.+... .......+.+|+.++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~i-g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVL-GKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEe-cccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 46777888 9999999999998 66778999987643 23445678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 80 YANGGTLYDKIVRQKG---QLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred ecCCCcHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 9999999999865421 46889999999999999999999 89999999999999999999999999999876644
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......+++.|+|||++.+..++.++|+||||+++|+|++|..||..... ....... ..+.....
T Consensus 154 ~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~-~~~~~~~~ 221 (256)
T cd08221 154 EYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---------LNLVVKI-VQGNYTPV 221 (256)
T ss_pred ccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHH-HcCCCCCC
Confidence 332 22334589999999999888899999999999999999999999864321 1111111 11111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
. ...+..+.+++.+||+.+|++|||+.++++.+
T Consensus 222 ~------------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 V------------SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred c------------cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1 13456789999999999999999999998753
No 223
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3e-41 Score=297.90 Aligned_cols=252 Identities=26% Similarity=0.315 Sum_probs=198.0
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhH--HHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYAS--ERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
|...+.| |+|+||+||++.. .++..||+|.+........ ....+|+.++.+++||||+++++++.+....++||||
T Consensus 1 y~~~~~l-g~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKL-GSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEE-EEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEE-EeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 4456677 9999999999999 5555899999987654332 2345699999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++... ..+++..+..++.|++.||.+|| +.+++|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~- 150 (260)
T PF00069_consen 80 CPGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE- 150 (260)
T ss_dssp ETTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-
T ss_pred ccccccccccccc-----ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 9999999999722 57899999999999999999999 89999999999999999999999999999876411
Q ss_pred CccccccccccCCCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT-TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.........++..|+|||++. +..++.++|+||||+++|+|++|..||..... .............. ..
T Consensus 151 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~------~~~~~~~~~~~~~~---~~ 220 (260)
T PF00069_consen 151 -NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS------DDQLEIIEKILKRP---LP 220 (260)
T ss_dssp -TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH------HHHHHHHHHHHHTH---HH
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccc------hhhhhhhhhccccc---cc
Confidence 112233445899999999998 78899999999999999999999999885411 01111111111100 00
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+.... ......+.+++.+||+.||++|||+.++++
T Consensus 221 ~~~~~~-------~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 221 SSSQQS-------REKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHTTSH-------TTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccc-------chhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 011368999999999999999999999975
No 224
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.5e-41 Score=298.34 Aligned_cols=245 Identities=22% Similarity=0.258 Sum_probs=197.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
|+..+.| |+|+||.||+|.+ .++..||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 6 y~~~~~l-~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 6 FTKLERI-GKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHh-cCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4445567 9999999999998 556688998876432 344567889999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.. ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 85 GGGSALDLLKP------GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999998853 46889999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
. ......++..|+|||++.+..++.++|+|||||++|||++|..|+...... . ......... .+
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~----~~~~~~~~~----~~ 219 (277)
T cd06642 156 I--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM------R----VLFLIPKNS----PP 219 (277)
T ss_pred h--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh------h----HHhhhhcCC----CC
Confidence 1 122334788999999999888999999999999999999999998643211 0 001111111 11
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+. ...+..+.+++.+||+.+|++|||+.+++.
T Consensus 220 ~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 220 TLE--------GQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCC--------cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111 134567899999999999999999999997
No 225
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.3e-41 Score=306.38 Aligned_cols=255 Identities=16% Similarity=0.129 Sum_probs=196.6
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. .++..||+|.+.... ....+.+.+|+.++..++|+||+.+++++.+++..++|
T Consensus 1 ~~y~~~~~l-G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVI-GRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEE-EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 467888888 9999999999998 567799999986532 12345588899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++.... ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 152 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRL 152 (331)
T ss_pred EecCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeec
Confidence 99999999999986421 46889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
...... ......||+.|+|||++.. ..++.++|||||||++|+|++|+.||..... .........
T Consensus 153 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~---------~~~~~~i~~ 222 (331)
T cd05597 153 LADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYGKIMN 222 (331)
T ss_pred CCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH---------HHHHHHHHc
Confidence 432221 1223458999999999863 4578899999999999999999999874321 111111211
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAE--DRPTMIDVAKK 341 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~--~RPt~~evl~~ 341 (350)
......+.+.. ...+..+.+++.+||..+++ .||++.+++..
T Consensus 223 ~~~~~~~~~~~---------~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 223 HKEHFQFPPDV---------TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCcccCCCcc---------CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 11111111110 02456788999998865443 37899988864
No 226
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-42 Score=312.27 Aligned_cols=244 Identities=22% Similarity=0.283 Sum_probs=202.1
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|+..+.| |.|+||-||-+++ .+...||||++.-... ..+.++..|+..|.+++|||+|.+-|+|......|||||
T Consensus 28 f~dLrEI-GHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHh-cCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4444556 9999999999999 6777899999876543 446779999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|| -||-.|++.-.. .++.+-.+..|+.+.++||.||| +.+.||||||..|||++..|.|||+|||.|....+
T Consensus 107 YC-lGSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HH-hccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 99 578888775332 67889999999999999999999 99999999999999999999999999999877643
Q ss_pred CCccccccccccCCCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTT---GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..+.+|||.|||||++.. +.|+.++||||||++..||.-.++|..+..-. -+.=.+..+.
T Consensus 179 ------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM----------SALYHIAQNe- 241 (948)
T KOG0577|consen 179 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----------SALYHIAQNE- 241 (948)
T ss_pred ------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH----------HHHHHHHhcC-
Confidence 345679999999999864 67999999999999999999999998755421 1111122211
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.|.+..+ +.+..+..|+..||+.-|.+|||.+++++.
T Consensus 242 ---sPtLqs~-------eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 ---SPTLQSN-------EWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ---CCCCCCc-------hhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 2223222 677899999999999999999999998863
No 227
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.4e-41 Score=300.83 Aligned_cols=266 Identities=18% Similarity=0.209 Sum_probs=205.4
Q ss_pred cccHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeee
Q 018816 49 SFSSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCC 126 (350)
Q Consensus 49 ~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 126 (350)
.+.++++....++|.....| |+|+||.||++.. .++..+|+|.+.... .....+.+|+.++.++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l-g~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETI-GKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred eEEeecCCCcccceeeeeee-ccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 35667777888999999998 9999999999999 556688898875532 2245678899999999 699999999987
Q ss_pred e-----cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 127 L-----EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 127 ~-----~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
. +++..++||||+++++|.+++...... ...+++..+..++.|++.||.||| +.+++|+||||+||+++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~ 160 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTE 160 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCC
Confidence 4 345789999999999999987532211 146889999999999999999999 9999999999999999999
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 276 (350)
+.++|+|||++........ ......|++.|+|||++.. ..++.++|||||||++|+|++|..|+......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--- 235 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--- 235 (286)
T ss_pred CCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh---
Confidence 9999999999876543221 1233458999999998753 44789999999999999999999998754321
Q ss_pred CcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 277 SNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
...............++ ...+..+.+++.+||+.||++|||+.+|++.+
T Consensus 236 ------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 236 ------RALFKIPRNPPPTLHQP-----------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ------HHHhhccccCCCcccCC-----------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00001000000011111 12345789999999999999999999998753
No 228
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.6e-41 Score=298.05 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=197.4
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeecC-----
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLEA----- 129 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----- 129 (350)
.+++.|+..+.| |+|+||.||+|.. .++..||+|.+.... .....+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~l-g~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELV-GNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHhe-eecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 355678888888 9999999999998 556688888886543 3346788999999998 699999999998753
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
...+++|||+++++|.+++..... ..+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEcc
Confidence 357899999999999999875321 46889999999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
||++........ ......|++.|+|||++. +..++.++|+|||||++|||++|..||...... .
T Consensus 155 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~---------~ 223 (272)
T cd06637 155 FGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---------R 223 (272)
T ss_pred CCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---------H
Confidence 999876533211 223445889999999986 335888999999999999999999998643221 0
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ......... +.... ...+..+.+|+.+||+.+|.+|||+.++++
T Consensus 224 ~-~~~~~~~~~----~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 224 A-LFLIPRNPA----PRLKS-------KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred H-HHHHhcCCC----CCCCC-------CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 011111110 00000 133467899999999999999999999975
No 229
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.5e-41 Score=295.64 Aligned_cols=238 Identities=20% Similarity=0.267 Sum_probs=188.0
Q ss_pred ccccCCCceEEEEEEECC-C-------ceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 67 ITIDEIEGYILYMGFLRD-R-------GPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~-~-------~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.| |+|+||.||+|.... + ..|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 2 ~l-g~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 2 SL-GQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CC-CcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 45 999999999998832 2 24888887665545567788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc--------eeEcccC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA--------AKLFDFS 210 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~--------~kl~Dfg 210 (350)
+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++. ++++|||
T Consensus 81 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999986542 35889999999999999999999 999999999999999987765 5999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCC-CCCCCCcccCCCCcchHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGR-TIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
.+...... ....+++.|+|||++.+. .++.++||||||+++|+|++|. .|+..... . . ....
T Consensus 154 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~------~---~-~~~~ 217 (258)
T cd05078 154 ISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS------Q---K-KLQF 217 (258)
T ss_pred cccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH------H---H-HHHH
Confidence 88654321 223478899999999874 5799999999999999999995 44442211 0 0 0111
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
... ... +.+ ....++.+|+.+||+.+|++|||+.++++.|
T Consensus 218 ~~~-~~~-~~~------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 218 YED-RHQ-LPA------------PKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHc-ccc-CCC------------CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 111 111 000 2235689999999999999999999999886
No 230
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.9e-41 Score=312.30 Aligned_cols=197 Identities=19% Similarity=0.201 Sum_probs=171.2
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC-C-----CCccceeeeeecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN-H-----KSILKLIGCCLEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~ 133 (350)
.|.+.++| |+|+||.|-+|.+ +++..||||.++... .-..+...|+.+|..|+ | -|+|+++++|...+++|
T Consensus 187 rY~V~e~L-GkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVL-GKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEe-cccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 46677888 9999999999999 667899999997764 33456678999999997 4 37999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC--CceeEcccCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE--YAAKLFDFSL 211 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~ 211 (350)
||+|.+ ..+|.+++..+. ...++...+..++.||+.||.+|| ..+|||+||||+||||... ..+||+|||.
T Consensus 265 iVfELL-~~NLYellK~n~---f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 265 IVFELL-STNLYELLKNNK---FRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeehhh-hhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 999999 579999997653 367999999999999999999999 9999999999999999653 4799999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 271 (350)
|+....... +.+-+..|.|||++.+.+|+.+.||||||||+.||++|.+.|.+..
T Consensus 338 Sc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 338 SCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 998654332 4457889999999999999999999999999999999998887654
No 231
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-40 Score=296.36 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=198.3
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+|+..+.| |+|+||.||++.. ..+..||+|.+... .......+.+|+.++.+++||||+++++.+...+..++||||
T Consensus 2 ~~~~~~~i-g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDEL-GKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhh-cccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 56667788 9999999999999 46779999988653 223456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
+++++|..++..... ...+++..+..++.+++.||.||| . .+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 81 MDAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLK---EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred cCCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHH---hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 999999988865321 146899999999999999999999 5 5899999999999999999999999999876533
Q ss_pred CCccccccccccCCCCCCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGY------YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
.. .....+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||..... ........... .
T Consensus 156 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~-~ 224 (286)
T cd06622 156 SL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY------ANIFAQLSAIV-D 224 (286)
T ss_pred Cc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch------hhHHHHHHHHh-h
Confidence 22 22334788999999986543 58899999999999999999999864321 11111111111 1
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+. ...+.++.+++.+||+.+|++||++.+++.
T Consensus 225 ~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 225 GDPPTLP------------SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cCCCCCC------------cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1111111 145677899999999999999999999987
No 232
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.3e-40 Score=298.78 Aligned_cols=262 Identities=16% Similarity=0.157 Sum_probs=191.3
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhc---CCCCccceeeeeecC-----
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQM---NHKSILKLIGCCLEA----- 129 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~----- 129 (350)
.|.....| |+|+||.||+|.+ .++..||+|.+..... .....+.+|+.+++.+ +||||+++++++.+.
T Consensus 1 ~y~~~~~l-g~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEE-eecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 36677778 9999999999999 5667899998865321 1223456677777665 699999999988643
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEccc
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
...++||||++ ++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+||
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPP---PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcc
Confidence 35799999997 588888865321 35899999999999999999999 999999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
|++........ .....+|..|+|||++.+..++.++|||||||++|+|++|.+||...... ..........
T Consensus 153 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~ 223 (288)
T cd07863 153 GLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA------DQLGKIFDLI 223 (288)
T ss_pred CccccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH------HHHHHHHHHh
Confidence 99876543221 22344889999999999889999999999999999999999998643221 1111111111
Q ss_pred HhcC-----------CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 290 RSNG-----------YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 290 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... .....+.......... ...+..+.+++.+||+.||++|||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 224 GLPPEDDWPRDVTLPRGAFSPRGPRPVQSVV-PEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCCChhhCcccccccccccCCCCCCchHHhC-cCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 0000000000000000 134567899999999999999999999985
No 233
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-40 Score=292.59 Aligned_cols=247 Identities=22% Similarity=0.334 Sum_probs=197.4
Q ss_pred cCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
++|...+.| |+|+||.||+|...+ ..||+|.+.... ..+.+.+|+.++++++||||+++++++... ..++||||+
T Consensus 6 ~~~~~~~~l-g~g~~g~v~~~~~~~-~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEII-GEGEFGAVLQGEYTG-QKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeee-ccCCCCceEecccCC-CceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 467778888 999999999998654 489999986542 345788999999999999999999998654 579999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++..... ..+++..++.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 81 SKGNLVNFLRTRGR---ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 99999999865321 35789999999999999999999 9999999999999999999999999999987543221
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.....+..|+|||.+.++.++.++|+||||+++|+|++ |..||..... ............ .+
T Consensus 155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~--~~ 217 (254)
T cd05083 155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL----------KEVKECVEKGYR--ME 217 (254)
T ss_pred -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH----------HHHHHHHhCCCC--CC
Confidence 11224578999999988899999999999999999998 8998864321 111222222111 11
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+ +...+..+.+++.+||+.+|++||++.+|+..|++
T Consensus 218 ~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 P----------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C----------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1 01345678899999999999999999999998864
No 234
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9e-41 Score=308.79 Aligned_cols=270 Identities=15% Similarity=0.187 Sum_probs=198.3
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC---
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE--- 130 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 130 (350)
...++|...+.| |+|+||.||++.+ ..+..||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPI-GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEe-eecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 345789988998 9999999999998 566799999986532 234567889999999999999999999886433
Q ss_pred ---cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 131 ---MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 131 ---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEe
Confidence 46999999964 6766663 34788889999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC---------CCc
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG---------GSN 278 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---------~~~ 278 (350)
|||+++....... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...
T Consensus 162 Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 162 DFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred eCcccccCCCccc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999976543221 2334589999999999988999999999999999999999999975432100 000
Q ss_pred ch----HHHHHHHHHHhcC-CC-ccCcc-ccCCC---CccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 279 FF----ITDRVEKFIRSNG-YM-NIDPV-IVGDR---SCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 279 ~~----~~~~~~~~~~~~~-~~-~~~~~-~~~~~---~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. ............. .. ...+. ..... ...........+.+|+.+||+.||++|||+.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0001111111111 00 00000 00000 000001234678999999999999999999999974
No 235
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.2e-41 Score=299.25 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=202.3
Q ss_pred cCcccccccccCCCceEEEEEEEC------CCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR------DRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~------~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
++|.....| |+|+||.||+|+.+ +...|++|.+...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 5 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTL-GRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred Hhceeeeee-cccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 567777888 99999999999973 2347888887654333 456799999999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTH----LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
++||||+++++|.+++....... ...+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999986542110 125899999999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... .. ...
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---------~~-~~~ 229 (275)
T cd05046 161 LSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---------EE-VLN 229 (275)
T ss_pred cccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---------HH-HHH
Confidence 9998654322211 1223346778999999988889999999999999999999 7778753221 11 111
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
...........+ ...+..+.+++.+||+.+|++|||+.+++..|.+
T Consensus 230 ~~~~~~~~~~~~-----------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 230 RLQAGKLELPVP-----------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HHHcCCcCCCCC-----------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 111111111000 1344679999999999999999999999998863
No 236
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-40 Score=299.85 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=197.6
Q ss_pred cccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 66 NITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
..| |+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 28 ~~l-g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 28 IKI-GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hcc-cCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 456 9999999999998 56679999998665555567788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++.. ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.++|+|||++........ ..
T Consensus 107 ~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~ 175 (292)
T cd06658 107 TDIVTH------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KR 175 (292)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cC
Confidence 998854 35789999999999999999999 89999999999999999999999999999876533221 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....++..|+|||.+.+..++.++|+||||+++|||++|..||..... .. ... .+... ..+.+...
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~---~~~-~~~~~----~~~~~~~~ 241 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP------LQ---AMR-RIRDN----LPPRVKDS 241 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HH---HHH-HHHhc----CCCccccc
Confidence 234588999999999888899999999999999999999999874321 11 111 11111 11111111
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+..+.+++.+||..||++|||+.++++.
T Consensus 242 ------~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 ------HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ------cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1334578899999999999999999999974
No 237
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.3e-41 Score=308.60 Aligned_cols=240 Identities=17% Similarity=0.093 Sum_probs=187.6
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhc---CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQM---NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
||+|+||+||+|+. .++..||+|.+..... ........|..++.++ .||||+.+++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 49999999999999 5677999999865422 2223455677777665 699999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.++|+|||++........
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 9999888653 56899999999999999999999 99999999999999999999999999999875432221
Q ss_pred ccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 222 IKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|..||..... ......+.........
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~----------~~~~~~i~~~~~~~~~-- 218 (330)
T cd05586 152 -TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT----------QQMYRNIAFGKVRFPK-- 218 (330)
T ss_pred -CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH----------HHHHHHHHcCCCCCCC--
Confidence 12344589999999998765 489999999999999999999999874321 1111222211111100
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCC----CHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP----TMIDVAK 340 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP----t~~evl~ 340 (350)
...++.+.+++.+||+.||++|| ++.++++
T Consensus 219 ----------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 ----------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ----------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 12346788999999999999998 5666654
No 238
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.8e-40 Score=307.73 Aligned_cols=268 Identities=15% Similarity=0.201 Sum_probs=197.1
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecC-----
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEA----- 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 129 (350)
..++|...+.| |+|+||.||++.+ ..+..||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEe-ecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45789999998 9999999999998 566789999986532 23456788999999999999999999987643
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
...++||||++ ++|.+.+. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 101 FQDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred cCeEEEEEeCCC-CCHHHHHH-------hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEe
Confidence 35799999996 47777663 34788899999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC---------CCcc
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG---------GSNF 279 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---------~~~~ 279 (350)
||+++...... ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||........ ....
T Consensus 170 fG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (364)
T cd07875 170 FGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246 (364)
T ss_pred CCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99997654322 12234589999999999999999999999999999999999999975432100 0000
Q ss_pred hHHH----HHHHHHHhcC-CCc-----cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 280 FITD----RVEKFIRSNG-YMN-----IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 280 ~~~~----~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... .......... ... ..+.................+.+|+.+||+.||++|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 0011111110 000 00000000000000123457899999999999999999999987
No 239
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-40 Score=297.14 Aligned_cols=257 Identities=18% Similarity=0.241 Sum_probs=202.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|+||+||++.. .++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+.+++|||
T Consensus 5 ~~~~~~~~i-g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDL-GAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHc-CCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 456667778 9999999999998 566688888875543 2345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++... +.+++.....++.+++.||.||| + .+++|+||+|+||+++.++.++|+|||++....
T Consensus 84 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 84 FMDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLY---NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred cCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---HhcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 99999999988653 46899999999999999999999 5 589999999999999999999999999886542
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC--CcchHHHHHHHHHHhcCC
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG--SNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 294 (350)
... .....|+..|+|||++.+..++.++|+|||||++|++++|..||......... ....+...........
T Consensus 156 ~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (284)
T cd06620 156 NSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-- 229 (284)
T ss_pred hhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--
Confidence 221 22345899999999998888999999999999999999999999854321100 0011111111111110
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.+.+. ....+..+.+|+.+||+.||++|||+.++++.
T Consensus 230 ---~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 230 ---PPRLP-------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ---CCCCC-------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 01110 11355679999999999999999999999975
No 240
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-40 Score=302.68 Aligned_cols=269 Identities=12% Similarity=0.114 Sum_probs=194.3
Q ss_pred cccccCC--CceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 66 NITIDEI--EGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 66 ~~lig~G--~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
.+| |+| +|++||++.. .++..||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 4 ~~i-g~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 4 TVI-GRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhc-cccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 455 999 6789999999 677789999986542 2334567789999999999999999999999999999999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
+++|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++++||+.+........
T Consensus 83 ~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 83 YGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999854321 35889999999999999999999 99999999999999999999999999986543321111
Q ss_pred c-----ccccccccCCCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH-------
Q 018816 221 H-----IKASTAIGSLEFAAPEYLTT--GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE------- 286 (350)
Q Consensus 221 ~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 286 (350)
. .......++..|+|||++.+ ..++.++|||||||++|||++|..||....... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~ 231 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-----MLLEKLNGTVPCLL 231 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-----HHHHHhcCCccccc
Confidence 0 01122346778999999976 358999999999999999999999997532210 0000000
Q ss_pred -------HHHH-hcCCCccCc-------------cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHH
Q 018816 287 -------KFIR-SNGYMNIDP-------------VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK--KLR 343 (350)
Q Consensus 287 -------~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~--~L~ 343 (350)
.... .......+. ..............+..+.+|+.+||+.||++|||+.+|++ .++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 0000 000000000 00000000011134568999999999999999999999987 354
Q ss_pred Hhh
Q 018816 344 QMY 346 (350)
Q Consensus 344 ~~~ 346 (350)
++.
T Consensus 312 ~~~ 314 (327)
T cd08227 312 QIK 314 (327)
T ss_pred hcc
Confidence 443
No 241
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.8e-40 Score=294.21 Aligned_cols=247 Identities=21% Similarity=0.251 Sum_probs=200.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.|+..+.| |+|+||.||+|.+ .++..||+|.+.... ......+.+|+.++++++||||+++++++.++...++||||
T Consensus 5 ~y~~~~~l-g~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERI-GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhc-ccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45556677 9999999999998 456789999876442 34456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++++|.+++.. .+++......++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 84 ~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 84 LGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999998854 45788999999999999999999 999999999999999999999999999998766433
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ......++..|+|||++.+..++.++|+|||||++|||++|..|+...... ...........
T Consensus 155 ~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----------~~~~~~~~~~~---- 218 (277)
T cd06640 155 QI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM----------RVLFLIPKNNP---- 218 (277)
T ss_pred cc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH----------hHhhhhhcCCC----
Confidence 21 122334788999999998888999999999999999999999998643221 00011111101
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
+. .....+..+.+++.+||+.+|++||++.+++..
T Consensus 219 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PT--------LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CC--------CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 11 112566789999999999999999999999764
No 242
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-40 Score=306.60 Aligned_cols=261 Identities=15% Similarity=0.184 Sum_probs=194.3
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecC-----
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEA----- 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 129 (350)
..++|.....| |+|+||.||+|.+ .++..||+|++..... .....+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQNLTPV-GSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhheec-ccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45678888888 9999999999998 5667899999865422 2345677999999999999999999987643
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
...++++|++ +++|.+++.. ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcC
Confidence 3568999988 7899887743 46899999999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
||++...... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...... ........
T Consensus 162 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~ 230 (343)
T cd07878 162 FGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI------DQLKRIME 230 (343)
T ss_pred CccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHH
Confidence 9998765432 223458999999999877 46899999999999999999999998643211 00000000
Q ss_pred HHHhcCCCc-----------cCccccCCCCcc---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 FIRSNGYMN-----------IDPVIVGDRSCF---RKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 ~~~~~~~~~-----------~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
......... ....+....... ......+.+.+|+.+||+.||++|||+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 231 VVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 000000000000 00012345789999999999999999999986
No 243
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.9e-40 Score=294.28 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=194.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-----hhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-----RYASERCFNNIVFASQMNHKSILKLIGCCLE--AEM 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 131 (350)
.+|...+.| |+|+||.||+|.. ..+..|++|++.... ......+.+|+.++++++||||+++++++.+ ...
T Consensus 2 ~~~~~~~~l-g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLL-GQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CCcccccee-cCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCE
Confidence 478888888 9999999999998 567799999875432 1234568899999999999999999998875 356
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++++||+++++|.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCC
Confidence 78999999999999998653 45789999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCcc-ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
+......... .......++..|+|||++.+..++.++|+|||||++|+|++|+.||..... ........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---------~~~~~~~~- 222 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---------MAAIFKIA- 222 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---------HHHHHHHh-
Confidence 8765332111 111223478899999999988899999999999999999999999874321 11111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+.+ +....+.+.+++ .||..+|++||++++|+.
T Consensus 223 ---~~~~~~~~--------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 223 ---TQPTNPQL--------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---cCCCCCCC--------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11111111 113345677777 688899999999999975
No 244
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5e-40 Score=291.32 Aligned_cols=250 Identities=18% Similarity=0.264 Sum_probs=198.2
Q ss_pred cccccccccCCCceEEEEEEECCCceEEEEEecccc------hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 62 YSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSV------RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
|.....| |+|+||.||+|...++..+|+|.+.... ......+.+|+.++++++|+||+++++++.+.+..+++
T Consensus 2 ~~~~~~i-g~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 2 WTKGEVL-GKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred ccccceE-eccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 5566777 9999999999998777789999876432 12235688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+||+++++|.+++... .++++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 81 MEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999998653 46789999999999999999999 899999999999999999999999999998754
Q ss_pred CCCCc----cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 216 PEGKT----HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 216 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
..... ........++..|+|||++.+..++.++|+|||||++|+|++|..||...... ... . ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~-~-~~~~ 222 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--------AAM-F-YIGA 222 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--------HHH-H-Hhhh
Confidence 32111 11122344889999999999888999999999999999999999998643210 000 0 0111
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+.+. ...+..+.+++.+||+.+|++|||+.+++.
T Consensus 223 --~~~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 --HRGLMPRLP--------DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --ccCCCCCCC--------CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 101111111 134567899999999999999999999875
No 245
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.5e-40 Score=300.41 Aligned_cols=264 Identities=17% Similarity=0.176 Sum_probs=197.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |.|+||.||+|.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~y~~~~~l-g~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKL-GEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEe-ccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 567888888 9999999999998 456689999986442 2234567789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ ++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 85 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 85 YLD-KDLKQYLDDCG----NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred ccc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 997 58888886532 45789999999999999999999 99999999999999999999999999999875432
Q ss_pred CCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH-------
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI------- 289 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------- 289 (350)
... ......+++.|+|||++.+. .++.++|||||||++|+|++|++||...... ..........
T Consensus 157 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~------~~~~~~~~~~~~~~~~~ 228 (301)
T cd07873 157 PTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE------EQLHFIFRILGTPTEET 228 (301)
T ss_pred CCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHcCCCChhh
Confidence 221 11223478899999988654 5789999999999999999999998754321 0000000000
Q ss_pred -----HhcCCCc-cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 290 -----RSNGYMN-IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 290 -----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....... ..+..............++.+.+|+.+||+.||.+|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 229 WPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred chhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 00110000000000134567899999999999999999999987
No 246
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.4e-40 Score=290.20 Aligned_cols=249 Identities=17% Similarity=0.194 Sum_probs=198.9
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeec-CCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLE-AEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 136 (350)
+|...+.| |.|++|.||++.. .++..||+|++.... ....+.+.+|+.++++++|+|++++++.+.. +..++++|
T Consensus 1 ~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVV-GKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEe-cCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 46777888 9999999999998 556689999986532 2345568899999999999999999998764 44678999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|.+++..... ..+++.++..++.+++.|+.+|| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 e~~~~~~l~~~l~~~~~---~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 80 GFCEGGDLYHKLKEQKG---KLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred cccCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 99999999999865321 46899999999999999999999 9999999999999999999999999999987664
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... ......+++.|+|||++.+..++.++|+||||+++++|++|+.||..... ........ .+....
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---------~~~~~~~~-~~~~~~ 221 (257)
T cd08223 154 NQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM---------NSLVYRII-EGKLPP 221 (257)
T ss_pred ccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---------HHHHHHHH-hcCCCC
Confidence 3221 22334588999999999988999999999999999999999999863221 11111111 111111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. +...++.+.+++.+||+.+|++|||+.++++
T Consensus 222 ~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 222 M------------PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred C------------ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0145568999999999999999999999986
No 247
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.1e-40 Score=291.98 Aligned_cols=258 Identities=18% Similarity=0.275 Sum_probs=198.2
Q ss_pred cccccccccCCCceEEEEEEEC----CCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----
Q 018816 62 YSMRNITIDEIEGYILYMGFLR----DRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAE----- 130 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~----~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 130 (350)
|...+.| |+|+||.||+|.+. .+..||+|.+... .....+++.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~i-g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRML-GKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred Ccchhcc-cCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 4455667 99999999999872 3468999988654 2334567889999999999999999999886532
Q ss_pred -cCeEEeecCCCCchhhhhhCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 131 -MPALVYEPAGYCTLADRLYGPL-QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 131 -~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
..++++||+++++|.+++.... ......+++.....++.|++.||.||| +.+|+|+||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECc
Confidence 2478899999999998875321 111235788999999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
||.++...............+++.|++||.+....++.++|||||||++|+|++ |.+||..... . ....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---------~-~~~~ 226 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---------S-EIYN 226 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---------H-HHHH
Confidence 999886644332222223335678999999988889999999999999999999 8888763321 1 1111
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.+......... ...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 227 ~~~~~~~~~~~------------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 YLIKGNRLKQP------------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHcCCcCCCC------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12111111101 03346799999999999999999999999999986
No 248
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6e-40 Score=291.94 Aligned_cols=253 Identities=16% Similarity=0.193 Sum_probs=197.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch----------hhHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR----------YASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
|...+.| |+|++|.||+|.. .++..||+|.+..... ...+.+.+|+.++++++||||+++++++...+
T Consensus 3 ~~~~~~l-g~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 3 WVKGELI-GKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred eeeccee-cccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4556677 9999999999998 5677899998753211 11345778999999999999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecc
Confidence 999999999999999998654 46889999999999999999999 8999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY--YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
++................++..|+|||++.... ++.++|+||||+++|++++|..||..... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---------~~~~~~~ 224 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---------IAAMFKL 224 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---------HHHHHHh
Confidence 987654322222223344888999999987654 88999999999999999999999863221 1111111
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
........+.+... ...+..+.+++.+||+.+|++|||+.+|++
T Consensus 225 ~~~~~~~~~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 225 GNKRSAPPIPPDVS--------MNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred hccccCCcCCcccc--------ccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11111111111110 134578999999999999999999999986
No 249
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1e-40 Score=305.37 Aligned_cols=254 Identities=16% Similarity=0.123 Sum_probs=196.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||+++. .++..||+|.+.... ......+.+|+.++..++|+||+.+++++.+.+..++|
T Consensus 1 d~y~i~~~l-G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVI-GRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEE-eeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 468888888 9999999999999 566689999886532 12334577899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~Ey~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~ 152 (331)
T cd05624 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKM 152 (331)
T ss_pred EeCCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeec
Confidence 99999999999996532 46889999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCccccccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
...... ......||+.|+|||++.+ +.++.++|+|||||++|+|++|+.||..... .........
T Consensus 153 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---------~~~~~~i~~ 222 (331)
T cd05624 153 NQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYGKIMN 222 (331)
T ss_pred cCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH---------HHHHHHHHc
Confidence 443221 1223459999999999875 4678999999999999999999999974321 111111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED--RPTMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~evl~ 340 (350)
......+.+.+ ...+..+.+++.+||..++.+ |+++.++++
T Consensus 223 ~~~~~~~p~~~---------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 223 HEERFQFPSHI---------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCCcccCCCcc---------ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 11111111111 134567889999999876544 467888765
No 250
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5.1e-40 Score=291.60 Aligned_cols=253 Identities=16% Similarity=0.197 Sum_probs=200.2
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc------hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV------RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
+|+....| |+|++|.||+|.. .++..||+|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..+
T Consensus 1 ~~~~~~~l-g~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQL-GTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred Ccccccee-cCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence 46677788 9999999999998 667799999986432 123467889999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEcccCCC
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLFDFSLS 212 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~ 212 (350)
+|+||+++++|.+++... .++++..+..++.|++.||.||| +.+++|+||+|+||+++.++ .++|+|||.+
T Consensus 80 ~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~ 151 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAA 151 (268)
T ss_pred EEEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccc
Confidence 999999999999998653 46889999999999999999999 99999999999999998776 5999999998
Q ss_pred ccCCCCCccc--cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 213 KSIPEGKTHI--KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 213 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
.......... ......++..|+|||.+.+..++.++|+||+|+++++|++|..||...... ...........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~ 225 (268)
T cd06630 152 ARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS------NHLALIFKIAS 225 (268)
T ss_pred cccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc------chHHHHHHHhc
Confidence 7665432111 122345788999999998888999999999999999999999998643210 11111111100
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...... .+...+..+.+++.+||+.+|++|||+.+++.
T Consensus 226 ~~~~~~------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 ATTAPS------------IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred cCCCCC------------CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000111 11245678999999999999999999999985
No 251
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.4e-40 Score=297.48 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=204.6
Q ss_pred ccHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeee
Q 018816 50 FSSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCL 127 (350)
Q Consensus 50 ~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 127 (350)
++..++...+++|.....| |+|+||.||++.. .++..+|+|.+.... .....+.+|+.++.++ +|||++++++++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l-~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 12 LGLESLGDPTDTWEIIETI-GKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhcccCCCCCCCeEEEEEe-ecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 5556777788999999999 9999999999999 566788999886542 2245677899999999 7999999999987
Q ss_pred cC-----CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC
Q 018816 128 EA-----EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY 202 (350)
Q Consensus 128 ~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~ 202 (350)
.. +..++||||+++++|.+++...... ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEG 165 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCC
Confidence 54 3589999999999999988542111 146889999999999999999999 89999999999999999999
Q ss_pred ceeEcccCCCccCCCCCccccccccccCCCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 018816 203 AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277 (350)
Q Consensus 203 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 277 (350)
.+||+|||++......... .....++..|+|||++... .++.++|+|||||++|+|++|+.||.....
T Consensus 166 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~----- 238 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP----- 238 (291)
T ss_pred CEEEeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-----
Confidence 9999999998765432211 2233488999999988653 368999999999999999999999874322
Q ss_pred cchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 278 NFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
................++ ......+.+++.+||+.+|++||++.++++
T Consensus 239 ----~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 239 ----VKTLFKIPRNPPPTLLHP-----------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ----HHHHHHHhcCCCCCCCcc-----------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111111111111111 134457999999999999999999999986
No 252
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-40 Score=306.56 Aligned_cols=265 Identities=17% Similarity=0.205 Sum_probs=192.6
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
...+|...+.| |+|+||.||+|.. ..+..||+|..... ....|+.++++++||||+++++++.+....++||
T Consensus 64 ~~~~y~~~~~l-g~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 64 ASLGYTVIKTL-TPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhcCcEEEEEe-cCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34679999998 9999999999999 45557888875432 2356899999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|++. ++|.+++.... ..+++..+..++.||+.||.||| ..+|+||||||+|||++.++.+||+|||++....
T Consensus 137 e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 137 PHYS-SDLYTYLTKRS----RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EccC-CcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 9995 68888875432 56899999999999999999999 9999999999999999999999999999987533
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCc-chHHHHHHHHHHhcC--
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSN-FFITDRVEKFIRSNG-- 293 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 293 (350)
... ......||+.|+|||++.+..++.++|||||||++|||+++..|+....+...... ......+...+....
T Consensus 209 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 285 (357)
T PHA03209 209 VAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH 285 (357)
T ss_pred cCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence 221 12234589999999999999999999999999999999986655433221100000 000111111111100
Q ss_pred CCccC--cc----------------ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 YMNID--PV----------------IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ~~~~~--~~----------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+. +. .............+..+.+|+.+||+.||++|||+.||++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 286 PEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred hhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 00000 00 0000000000123445678999999999999999999986
No 253
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.3e-40 Score=300.14 Aligned_cols=198 Identities=17% Similarity=0.195 Sum_probs=159.0
Q ss_pred cccccCCCceEEEEEEEC---CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCcCeEEeecCC
Q 018816 66 NITIDEIEGYILYMGFLR---DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLE--AEMPALVYEPAG 140 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~---~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 140 (350)
..| |+|+||.||+|+.. .+..||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||++
T Consensus 7 ~~l-G~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKV-GRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEe-ccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 456 99999999999974 34589999886542 23457789999999999999999998854 457899999986
Q ss_pred CCchhhhhhCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe----CCCCceeEcccCCC
Q 018816 141 YCTLADRLYGPL----QTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF----QEEYAAKLFDFSLS 212 (350)
Q Consensus 141 ~~sL~~~l~~~~----~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~ 212 (350)
++|.+++.... ......+++..+..++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 57777764211 111235888999999999999999999 9999999999999999 56678999999999
Q ss_pred ccCCCCCcc-ccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 018816 213 KSIPEGKTH-IKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLS 270 (350)
Q Consensus 213 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~ 270 (350)
+........ .......+|+.|+|||++.+. .++.++|||||||++|||++|.+||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 876443221 112334589999999998764 5899999999999999999999999754
No 254
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.9e-40 Score=299.17 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=197.0
Q ss_pred cccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 66 NITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
..| |+|+||.||++.. .++..||+|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++|
T Consensus 27 ~~i-g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 27 IKI-GEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhc-CCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 346 9999999999998 56779999998665445566788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
..++.. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 106 ~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~ 174 (297)
T cd06659 106 TDIVSQ------TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KR 174 (297)
T ss_pred HHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cc
Confidence 987743 45889999999999999999999 99999999999999999999999999999875543221 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....++..|+|||++.+..++.++|+|||||++|||++|..||..... . ... ..+....... ....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~---~~~-~~~~~~~~~~----~~~~ 240 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP------V---QAM-KRLRDSPPPK----LKNA 240 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------H---HHH-HHHhccCCCC----cccc
Confidence 234588999999999988899999999999999999999999874321 1 111 1111111000 0000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+..+.+++.+||+.+|++||++.++++.
T Consensus 241 ------~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 241 ------HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ------CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1234568899999999999999999999873
No 255
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.3e-40 Score=293.50 Aligned_cols=249 Identities=18% Similarity=0.196 Sum_probs=201.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+..+.| |+|+||.||++.. .++..|++|.+... .....+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l-g~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKI-GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEe-ccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 36777888 9999999999999 56778999998643 23345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++..... ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 80 YCEGGDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 9999999998864321 35789999999999999999999 89999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......+++.|+|||++.+..++.++|+|||||++++|++|..||..... .......... .....
T Consensus 154 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~-~~~~~ 221 (256)
T cd08218 154 TVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---------KNLVLKIIRG-SYPPV 221 (256)
T ss_pred chh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---------HHHHHHHhcC-CCCCC
Confidence 221 12233478899999999888899999999999999999999999864321 1122222111 11100
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+...+..+.+++.+||+.+|++||++.+|++
T Consensus 222 ------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 ------------SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ------------cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0134567999999999999999999999986
No 256
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-41 Score=301.27 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=208.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
+-|+.++.| |+|.|+.|-++++ -.|..||||.+.+..- .....+++|+..|+-++|||||++|.+..+...+|||+
T Consensus 18 GLYDLekTl-G~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTL-GRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhh-cCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 456666778 9999999999999 6677999999977532 34567899999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe-CCCCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF-QEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill-~~~~~~kl~Dfg~~~~~ 215 (350)
|.-++|+|++||.+.. ..+.+..+.+++.||+.|+.|+| +..+|||||||+||.+ ..-|-|||+|||++..+
T Consensus 97 ELGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 9999999999997654 56889999999999999999999 8999999999999876 56689999999999887
Q ss_pred CCCCccccccccccCCCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
.++. ...+.+|+..|-|||++.+..|. ++.||||||||||.|++|++||....+.+ .. -
T Consensus 170 ~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE------TL-----------T 229 (864)
T KOG4717|consen 170 QPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE------TL-----------T 229 (864)
T ss_pred CCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh------hh-----------h
Confidence 6554 35667799999999999999886 78999999999999999999998665420 00 1
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.++|-.. ..+...+.++.+||..||..||.+|.+.++|..
T Consensus 230 mImDCKY------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 230 MIMDCKY------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhcccc------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1112111 112478899999999999999999999999875
No 257
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.5e-40 Score=296.28 Aligned_cols=262 Identities=17% Similarity=0.187 Sum_probs=195.8
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|++|.||+|+. .++..||+|++.... ....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKI-GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEe-cccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 46677788 9999999999999 567799999986432 2234568899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ ++|.+++..... ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 80 FLS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred cCC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 997 688888754322 146889999999999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC---
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG--- 293 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (350)
... ......+++.|+|||++.+. .++.++|+|||||++|+|++|++||...... ...........
T Consensus 154 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~---------~~~~~~~~~~~~~~ 222 (285)
T cd07861 154 PVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI---------DQLFRIFRILGTPT 222 (285)
T ss_pred Ccc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHHHhCCCC
Confidence 221 12223478899999988754 4789999999999999999999998743221 00000000000
Q ss_pred ------------CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 ------------YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+..............+.++.+++.+||+.||++|||+.+|+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 223 EDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000000000124567889999999999999999999875
No 258
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-40 Score=295.44 Aligned_cols=254 Identities=18% Similarity=0.267 Sum_probs=199.5
Q ss_pred CcccccccccCCCceEEEEEEECC--CceEEEEEecccc----------hhhHHHHHHHHHHHHh-cCCCCccceeeeee
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRD--RGPILVMKYRKSV----------RYASERCFNNIVFASQ-MNHKSILKLIGCCL 127 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~--~~~vaik~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~ 127 (350)
+|+....| |+|+||.||+|.+.. +..+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~i-g~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 79 (269)
T cd08528 1 EYAVLEHL-GSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL 79 (269)
T ss_pred Cchhhhhh-cCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence 46667778 999999999999944 6689999875321 2234557788888875 79999999999999
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeE
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl 206 (350)
+++..+++|||+++++|.+++...... ...+++..++.++.|++.||.||| + .+++|+||+|+||+++.++.++|
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEE
Confidence 999999999999999999987432111 146889999999999999999999 6 67999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
+|||.+....... ......++..|+|||.+.+..++.++|+||||+++|+|++|.+||..... .....
T Consensus 156 ~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~---------~~~~~ 223 (269)
T cd08528 156 TDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM---------LSLAT 223 (269)
T ss_pred ecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---------HHHHH
Confidence 9999987654432 22344588999999999988899999999999999999999999864321 11111
Q ss_pred HHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 287 KFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
.+...... +... ...+..+.+++.+||+.||++||++.+|.++++
T Consensus 224 -~~~~~~~~---~~~~--------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 224 -KIVEAVYE---PLPE--------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -HHhhccCC---cCCc--------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111111 1100 123467899999999999999999999999875
No 259
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-40 Score=303.64 Aligned_cols=255 Identities=16% Similarity=0.121 Sum_probs=196.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. ..+..+|+|.+.+.. ......+.+|+.++..++|+||+.+++++.+.+..++|
T Consensus 1 ~~y~~~~~l-G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVI-GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEE-EeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 367888888 9999999999999 455578899886432 12234577899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++|+|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 80 ~ey~~~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred EeccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheec
Confidence 99999999999996532 46889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .........
T Consensus 153 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~---------~~~~~~i~~ 222 (332)
T cd05623 153 MEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL---------VETYGKIMN 222 (332)
T ss_pred ccCCcc-eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH---------HHHHHHHhC
Confidence 332221 123345999999999986 34688999999999999999999999974321 111111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAED--RPTMIDVAKK 341 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~evl~~ 341 (350)
......+.... ...+..+.+|+.+|+..+++. |+++.++++.
T Consensus 223 ~~~~~~~p~~~---------~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 223 HKERFQFPAQV---------TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCccccCCCcc---------ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11101011100 134567889999988765544 6889988764
No 260
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.5e-40 Score=328.39 Aligned_cols=257 Identities=18% Similarity=0.215 Sum_probs=196.9
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCc
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLE--AEM 131 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 131 (350)
...++|.....| |+|+||+||++.+ ..+..||+|.+... .......+..|+.++.+|+|||||+++++|.+ ...
T Consensus 10 ~~l~~YeIl~kL-G~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKI-GNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEE-ecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 445789999998 9999999999999 55557788877543 22345678899999999999999999998864 356
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccC----CCCeEeeccccCceEeCC-------
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGF----PQPVVFRNIEPWNILFQE------- 200 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~dlkp~Nill~~------- 200 (350)
+++||||+++++|.++|...... ...+++..++.|+.||+.||.|||... ..+|+|+||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 89999999999999998653211 146899999999999999999999321 146999999999999964
Q ss_pred ----------CCceeEcccCCCccCCCCCccccccccccCCCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCC
Q 018816 201 ----------EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT--GYYNEKTDVYSFGKLLLVLLTGRTIGH 268 (350)
Q Consensus 201 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~ 268 (350)
.+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 34589999999976543221 233458999999999864 458899999999999999999999997
Q ss_pred CCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 269 LSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... .. .+...+.... .+.. ...+..+.+|+..||+.+|.+||++.+++.
T Consensus 245 ~~~~--------~~-qli~~lk~~p------~lpi-------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 245 KANN--------FS-QLISELKRGP------DLPI-------KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cCCc--------HH-HHHHHHhcCC------CCCc-------CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 4322 11 1111111111 0000 023467899999999999999999999984
No 261
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.3e-40 Score=289.17 Aligned_cols=246 Identities=22% Similarity=0.205 Sum_probs=198.7
Q ss_pred cccccccccCCCceEEEEEEEC-CCceEEEEEecccc-----hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 62 YSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSV-----RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
|...+.| |+|++|.||+|... ++..|++|.+.... ....+.+.+|+.+++.++|+||+++++++.++...+++
T Consensus 2 ~~~~~~i-g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELL-GSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred cccccee-eecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 5566777 99999999999994 77799999876543 22446788999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||.+...
T Consensus 81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999999998653 45889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
.... ......++..|+|||.+.... ++.++|+||||+++|+|++|..||..... .............
T Consensus 153 ~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---------~~~~~~~~~~~~~ 220 (258)
T cd06632 153 VEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---------VAAVFKIGRSKEL 220 (258)
T ss_pred cccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---------HHHHHHHHhcccC
Confidence 4332 123344889999999987776 89999999999999999999999874321 1111111110111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..+. ...+..+.+++.+||+.+|++||++.+++.
T Consensus 221 ~~~~------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 PPIP------------DHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CCcC------------CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1111 133467889999999999999999999975
No 262
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.7e-40 Score=297.73 Aligned_cols=256 Identities=18% Similarity=0.113 Sum_probs=199.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|+||.||++.. ..+..|++|.+..... .....+.+|+.+++.++||||+++++.+.+++..++|
T Consensus 1 ~~y~~~~~l-~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLI-SNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEe-ecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 467788888 9999999999999 5566899998865532 3345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.++..
T Consensus 80 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~ 151 (305)
T cd05609 80 MEYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIG 151 (305)
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCcccc
Confidence 9999999999998653 46889999999999999999999 999999999999999999999999999988642
Q ss_pred CCCCc-------------cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 018816 216 PEGKT-------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 216 ~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~ 282 (350)
..... ........++..|+|||.+.+..++.++|+|||||++|||++|..||..... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~---------~ 222 (305)
T cd05609 152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---------E 222 (305)
T ss_pred CcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------H
Confidence 11100 0011123478899999999888899999999999999999999999864321 1
Q ss_pred HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 283 DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
... ........ ..+... ...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 223 ~~~-~~~~~~~~--~~~~~~--------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 223 ELF-GQVISDDI--EWPEGD--------EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHH-HHHHhccc--CCCCcc--------ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111 11111110 011100 0234678999999999999999996555555443
No 263
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.7e-40 Score=292.26 Aligned_cols=250 Identities=18% Similarity=0.199 Sum_probs=196.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-----hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--Cc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-----RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EM 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 131 (350)
.+|...+.| |+|+||.||+|.. .++..|++|.+.... ....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l-~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLL-GQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEE-ecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence 468888888 9999999999998 557799999875321 12345788999999999999999999988764 46
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
++++|||+++++|.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~ 152 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGA 152 (265)
T ss_pred EEEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcc
Confidence 78999999999999998643 45788899999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCcc-ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
+......... .......++..|+|||++.+..++.++|+|||||++|+|++|+.||..... .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~ 223 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---------MAAIFKIAT 223 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---------HHHHHHHhc
Confidence 8765332111 112233488899999999888899999999999999999999999864321 011111110
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+.. +......+.+++.+||. +|+.||++++|++
T Consensus 224 ----~~~~~~~--------~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 224 ----QPTNPVL--------PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ----CCCCCCC--------chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011111 12455678899999995 8999999999985
No 264
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7.5e-40 Score=288.52 Aligned_cols=250 Identities=25% Similarity=0.361 Sum_probs=199.4
Q ss_pred ccccccccCCCceEEEEEEECC-----CceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 63 SMRNITIDEIEGYILYMGFLRD-----RGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~-----~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
...+.| |.|+||.||++...+ ...||+|.+...... ..+.+.+|+.++..++|+||+++++++.+.+..+++|
T Consensus 2 ~~~~~l-g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKL-GEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred ccccee-ccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 345667 999999999999943 368999998665433 5678899999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 81 e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999865321 12899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
........ ...+++.|+|||.+.+..++.++|+||||+++++|++ |.+||..... .............
T Consensus 155 ~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~----------~~~~~~~~~~~~~ 223 (258)
T smart00219 155 DDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN----------EEVLEYLKKGYRL 223 (258)
T ss_pred cccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHhcCCCC
Confidence 54322211 2226789999999988889999999999999999998 7787764211 1111122211111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
.. + ...+.++.+++.+||..+|++|||+.++++.|
T Consensus 224 ~~-~-----------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 PK-P-----------ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CC-C-----------CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 10 0 13456799999999999999999999998864
No 265
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7.2e-40 Score=289.07 Aligned_cols=236 Identities=22% Similarity=0.281 Sum_probs=187.2
Q ss_pred ccccCCCceEEEEEEECCCc-----------eEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 67 ITIDEIEGYILYMGFLRDRG-----------PILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~-----------~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
.| |+|+||.||+|.+.+.. .|++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 2 ~l-g~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 2 HL-GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred cc-cccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 45 99999999999995443 4777776554333 6778899999999999999999999988 778999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-------ceeEcc
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-------AAKLFD 208 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-------~~kl~D 208 (350)
|||+++++|.+++.... ..+++..+..++.||+.||.||| +.+|+|+||||+||+++.++ .+||+|
T Consensus 79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999986542 26889999999999999999999 99999999999999999887 799999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTG-RTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
||++..... .....++..|+|||++.+. .++.++|+||||+++|+|++| ..|+...... . .
T Consensus 152 fg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~---------~-~ 215 (259)
T cd05037 152 PGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS---------E-K 215 (259)
T ss_pred CCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch---------h-H
Confidence 999876543 1123367789999998876 789999999999999999994 6666533210 0 0
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
...+.... .... .....+.+++.+||..+|.+|||+.+|++.|
T Consensus 216 ~~~~~~~~-~~~~-------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 216 ERFYQDQH-RLPM-------------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHHhcCC-CCCC-------------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111100 0000 1115788999999999999999999999877
No 266
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-40 Score=296.69 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=203.1
Q ss_pred ccHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeee
Q 018816 50 FSSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCL 127 (350)
Q Consensus 50 ~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 127 (350)
.+..++....+.|+....| |.|+||.||+|.+ .++..||+|.+.... .....+..|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~l-g~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 6 IDLSALRDPAGIFELVEVV-GNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhhcChhhhhhhheee-ccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 4667777778899999998 9999999999999 566688888875543 3345688899999998 6999999999985
Q ss_pred c------CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 128 E------AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 128 ~------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
. ....+++|||+++++|.+++..... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.+
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCC
Confidence 3 4578999999999999998865322 45788889999999999999999 9999999999999999999
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 276 (350)
+.++|+|||++........ ......|++.|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 158 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--- 232 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--- 232 (282)
T ss_pred CCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH---
Confidence 9999999999875532211 123345889999999876 345788999999999999999999998643221
Q ss_pred CcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 277 SNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..... ...... +... ....+..+.+|+.+||+.||.+|||+.+|++
T Consensus 233 ------~~~~~-~~~~~~----~~~~-------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 233 ------RALFL-IPRNPP----PKLK-------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------hhhhh-HhhCCC----CCCc-------ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 111000 1010 0134567999999999999999999999975
No 267
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.9e-40 Score=291.85 Aligned_cols=252 Identities=17% Similarity=0.210 Sum_probs=201.5
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+|+..+.| |+|++|.||++.+ .++..|++|.+.... ......+.+|+.++++++||||+++++.+...+..++++||
T Consensus 2 ~~~~~~~i-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGEL-GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHh-cCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 56667778 9999999999999 466789999886653 34456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
+++++|.+++.... ..++......++.|++.||.||| + .+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 81 MDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred cCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 99999999986542 46889999999999999999999 8 9999999999999999999999999999866532
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...... .............. ..
T Consensus 154 ~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~-~~--- 221 (265)
T cd06605 154 SLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP----PDGIFELLQYIVNE-PP--- 221 (265)
T ss_pred HHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc----cccHHHHHHHHhcC-CC---
Confidence 211 1145888999999999889999999999999999999999998754210 01111111111111 10
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+ .....+..+.+++.+||..+|++|||+.+++.
T Consensus 222 -~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 222 -PRL-------PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -CCC-------ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 111 00125567999999999999999999999986
No 268
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=311.23 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=204.6
Q ss_pred cccccCCCceEEEEEEEC--CC--ceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 66 NITIDEIEGYILYMGFLR--DR--GPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~--~~--~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
+.| |+|.||.|++|.|. ++ -.||||.+...... ...+|.+|+.+|.+|+|+|+|++||+..+ ....+|||+++
T Consensus 116 e~L-G~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 116 ELL-GEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHh-cCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 456 99999999999992 22 27899999877543 67889999999999999999999999988 77899999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
.|||.+.|++... ..+.....-.++.|||.|+.||. ++++|||||..+|+|+-..-.+||+|||+.+.++....
T Consensus 194 lGSLldrLrka~~---~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKK---AILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred cchHHHHHhhccc---cceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 9999999987432 56788888999999999999999 99999999999999999999999999999998877665
Q ss_pred ccccc-ccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 221 HIKAS-TAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 221 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
..... ..--.+.|+|||.+....|+.++|+|+|||++|||+| |..||..... ..+ .+.+..+
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g------~qI----L~~iD~~------ 331 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG------IQI----LKNIDAG------ 331 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH------HHH----HHhcccc------
Confidence 54322 2224668999999999999999999999999999999 7788875543 111 1111111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
+....+..+++++.+++..||..+|++|||+..|.+.+-.
T Consensus 332 ------erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 332 ------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred ------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 1111223788999999999999999999999999755443
No 269
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.3e-40 Score=293.75 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=198.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|+....| |+|++|.||+|.+ .++..||+|++..... ...+.+.+|+.++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKI-GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred Cceeeeeee-cccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 357777888 9999999999999 4677999998865422 23356789999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|..++... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++....
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07847 80 EYCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILT 151 (286)
T ss_pred eccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecC
Confidence 999998888776443 46899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH------
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI------ 289 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 289 (350)
.... ......++..|+|||++.+ ..++.++|+||||+++|+|++|..||...... ..........
T Consensus 152 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~ 223 (286)
T cd07847 152 GPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV------DQLYLIRKTLGDLIPR 223 (286)
T ss_pred CCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCChH
Confidence 4321 1122347889999999876 45889999999999999999999998754321 0000000000
Q ss_pred -----HhcC-C-CccCccccCCCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 290 -----RSNG-Y-MNIDPVIVGDRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 290 -----~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... . ....+........ ......+..+.+|+.+||+.+|++|||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 224 HQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000 0 0000000000000 000123567899999999999999999999875
No 270
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.9e-40 Score=289.65 Aligned_cols=258 Identities=19% Similarity=0.236 Sum_probs=204.4
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|+..+.| |.|++|+||+|.. .++..+++|.+.... ......+.+|+.+++.++|+||+++++.+..++..++|||
T Consensus 1 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVI-GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred Ccceeeeee-cCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 467888888 9999999999998 566689999886542 2345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
++++++|.+++..... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 80 YLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred ccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 9999999999865321 135889999999999999999999 99999999999999999999999999999876654
Q ss_pred CCccc--cccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTHI--KASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..... ......++..|+|||++... .++.++|+|||||++|+|++|..||...... ......... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---------~~~~~~~~~-~~ 224 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---------KVLMLTLQN-DP 224 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---------hhHHHHhcC-CC
Confidence 43321 22334588999999998877 7899999999999999999999998754321 111111111 11
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....... . ....+..+.+++.+||+.||++|||+.+|+.
T Consensus 225 ~~~~~~~----~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 PSLETGA----D---YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcCCcc----c---cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111100 0 0145578899999999999999999999986
No 271
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.6e-40 Score=295.06 Aligned_cols=251 Identities=20% Similarity=0.252 Sum_probs=203.0
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
.++|...+.| |+|+||.||++.. .++..|++|.+........+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 18 ~~~~~~~~~l-g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKI-GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEe-cCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 3678888888 9999999999998 5667899999865544556778899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++.. ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 97 ~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 97 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred cCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999864 35788999999999999999999 99999999999999999999999999998875543
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......+++.|+|||.+.+..++.++|+||||+++|++++|..||....... .... ........
T Consensus 168 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~---------~~~~-~~~~~~~~- 234 (293)
T cd06647 168 EQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---------ALYL-IATNGTPE- 234 (293)
T ss_pred ccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh---------heee-hhcCCCCC-
Confidence 322 1223348889999999988889999999999999999999999997543210 0000 00000000
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. .....+..+.+++.+||..+|++||++.+++..
T Consensus 235 ---~~------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 ---LQ------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---CC------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 011345678999999999999999999999874
No 272
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=292.56 Aligned_cols=298 Identities=17% Similarity=0.203 Sum_probs=222.9
Q ss_pred hhcchhHHHHHHhhcCCCCCCcccccHHHHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHH
Q 018816 26 LRNGQIFLEKLIASFDGKRNPIRSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCF 105 (350)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~ 105 (350)
..+|+..+.+++.....+++..- +.+=--.+..+.....+.| |+|.||+||+|.+.+. .||||.|...+ ...+.
T Consensus 178 ~~~~~stl~Dll~~~~tSGSGSG-lplLVQRTiarqI~L~e~I-GkGRyGEVwrG~wrGe-~VAVKiF~srd---E~SWf 251 (513)
T KOG2052|consen 178 TLAGDSTLKDLLDDLETSGSGSG-LPLLVQRTIARQIVLQEII-GKGRFGEVWRGRWRGE-DVAVKIFSSRD---ERSWF 251 (513)
T ss_pred cccCCccHHHHHHhhccCCCCCC-chhHhHHhhhheeEEEEEe-cCccccceeeccccCC-ceEEEEecccc---hhhhh
Confidence 45566667777766544433321 2222223445667777777 9999999999999887 99999998764 45577
Q ss_pred HHHHHHH--hcCCCCccceeeeeecCC----cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018816 106 NNIVFAS--QMNHKSILKLIGCCLEAE----MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLR 179 (350)
Q Consensus 106 ~E~~~l~--~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH 179 (350)
+|.+|.. .|+|+||+.+++.-..++ .++||++|.+.|||+|+|.. .+++....++++..+|.||+|||
T Consensus 252 rEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH 325 (513)
T KOG2052|consen 252 RETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLH 325 (513)
T ss_pred hHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHH
Confidence 8888876 459999999998755443 78999999999999999976 57999999999999999999999
Q ss_pred c-----cCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc--ccccccccCCCCCCccccccCC----CC--c
Q 018816 180 F-----GFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH--IKASTAIGSLEFAAPEYLTTGY----YN--E 246 (350)
Q Consensus 180 ~-----~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~~--~ 246 (350)
. +....|.|||||+.|||+.+++.+-|+|+|+|......... ...+..+||.+|||||++...- |. .
T Consensus 326 ~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk 405 (513)
T KOG2052|consen 326 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK 405 (513)
T ss_pred HHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence 4 23567999999999999999999999999999777554322 2356678999999999986532 22 4
Q ss_pred cchhHHHHHHHHHHHhC----------CCCCCCCcccCCCCcchHHHHHHHHH-HhcCCCccCccccCCCCccchHHHHH
Q 018816 247 KTDVYSFGKLLLVLLTG----------RTIGHLSRLATGGSNFFITDRVEKFI-RSNGYMNIDPVIVGDRSCFRKEEKLQ 315 (350)
Q Consensus 247 ~~DiwslG~il~el~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (350)
.+||||||.++||+... +.||...-+.+ ... +.+++.+ .+...+.+++.+... +...
T Consensus 406 ~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D----Ps~-eeMrkVVCv~~~RP~ipnrW~s~-------~~l~ 473 (513)
T KOG2052|consen 406 RADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD----PSF-EEMRKVVCVQKLRPNIPNRWKSD-------PALR 473 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC----CCH-HHHhcceeecccCCCCCcccccC-------HHHH
Confidence 68999999999999862 46666543321 111 1112211 111133444444433 7788
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 316 AYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 316 ~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
.+.+++..||..+|..|-|+--+-+.|.++.+
T Consensus 474 ~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 474 VMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998864
No 273
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.6e-40 Score=316.19 Aligned_cols=271 Identities=14% Similarity=0.156 Sum_probs=192.4
Q ss_pred HHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCC------CCccceeeee
Q 018816 54 DLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNH------KSILKLIGCC 126 (350)
Q Consensus 54 ~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~ 126 (350)
++...+++|...+.| |+|+||.||+|.+ ..+..||||++.... .....+..|+.++..++| .+++.+++++
T Consensus 123 ~~~~~~~~y~i~~~l-G~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 123 DIDVSTQRFKILSLL-GEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccccCCCcEEEEEEE-EeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556889999998 9999999999998 556689999986532 223445667777777754 4588888888
Q ss_pred ecC-CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCC--
Q 018816 127 LEA-EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEY-- 202 (350)
Q Consensus 127 ~~~-~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~-- 202 (350)
... ...++|||++ +++|.+++... ..+++..+..++.||+.||.||| . .+|+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcc
Confidence 754 4788999988 67888888643 46899999999999999999999 7 5999999999999998765
Q ss_pred --------------ceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 018816 203 --------------AAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGH 268 (350)
Q Consensus 203 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 268 (350)
.+||+|||.+..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 499999998764322 1234569999999999999999999999999999999999999997
Q ss_pred CCcccC---------CCCcchHHH-----HHHHHHHhcC--CCccCccccC---CCCccchHHHHHHHHHHHHHccccCC
Q 018816 269 LSRLAT---------GGSNFFITD-----RVEKFIRSNG--YMNIDPVIVG---DRSCFRKEEKLQAYVELAFKCLSHSA 329 (350)
Q Consensus 269 ~~~~~~---------~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P 329 (350)
...... +..+..+.. .....+.... ....++.... .............+.+|+.+||++||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 543210 000000000 0000110000 0000000000 00000000123567899999999999
Q ss_pred CCCCCHHHHHH
Q 018816 330 EDRPTMIDVAK 340 (350)
Q Consensus 330 ~~RPt~~evl~ 340 (350)
++|||+.|+++
T Consensus 427 ~~R~ta~e~L~ 437 (467)
T PTZ00284 427 QKRLNARQMTT 437 (467)
T ss_pred hhCCCHHHHhc
Confidence 99999999997
No 274
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-39 Score=286.66 Aligned_cols=248 Identities=19% Similarity=0.228 Sum_probs=199.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|++|.||++.. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVV-GRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEe-cccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 46677788 9999999999998 566789999986542 2345678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++..... ..+++..+..++.+++.||.||| +++++|+||+|+||+++.+ +.++|+|||.+....
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 80 YAPGGTLAEYIQKRCN---SLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred cCCCCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 9999999999965321 45889999999999999999999 9999999999999999865 467999999998764
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ........ ......
T Consensus 154 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---------~~~~~~~~-~~~~~~ 220 (256)
T cd08220 154 SKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---------PALVLKIM-SGTFAP 220 (256)
T ss_pred CCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---------HHHHHHHH-hcCCCC
Confidence 4322 2234478899999999988899999999999999999999999864321 11111111 111111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+. ...+..+.+++.+||+.+|++|||+.+++.
T Consensus 221 ~~------------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 221 IS------------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CC------------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 123467899999999999999999999986
No 275
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-39 Score=290.00 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=198.8
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
|...+.| |+|+||.||+|.. .++..||+|.+.... ......+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus 6 ~~~~~~i-g~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 6 FTKLEKI-GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhheeE-eecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4556677 9999999999998 566789999875432 234467889999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.. ..+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 85 GGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999998854 45889999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
. ......++..|+|||.+.+..++.++|+|||||++|+|++|..|+..... ......+.......+.
T Consensus 156 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~- 222 (277)
T cd06641 156 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP----------MKVLFLIPKNNPPTLE- 222 (277)
T ss_pred h--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch----------HHHHHHHhcCCCCCCC-
Confidence 1 12233478899999999888899999999999999999999999864321 1111111111111111
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+..+.+++.+||+.+|++||++.+++..
T Consensus 223 -----------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 -----------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -----------cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1345678899999999999999999999983
No 276
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.2e-40 Score=292.20 Aligned_cols=247 Identities=20% Similarity=0.244 Sum_probs=197.9
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcC---CCCccceeeeeecCCcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMN---HKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv 135 (350)
.|+..+.| |+|+||.||+|.+ .++..|++|.+.... .....++.+|+.++++++ |||++++++++.++...++|
T Consensus 2 ~y~~~~~l-~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELI-GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhhe-eccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 46666777 9999999999998 667799999886542 344567889999999996 99999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++.. ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 81 ~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 81 MEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999998854 36889999999999999999999 999999999999999999999999999998776
Q ss_pred CCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
..... ......|+..|+|||.+.++ .++.++|+|||||++|+|++|..||...... ... ......
T Consensus 152 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---------~~~-~~~~~~-- 217 (277)
T cd06917 152 NQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---------RAM-MLIPKS-- 217 (277)
T ss_pred CCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---------hhh-hccccC--
Confidence 54332 12333588999999988754 4789999999999999999999998743221 000 000000
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..+.+... ..+.++.+++.+||+.||++||++.+++.
T Consensus 218 --~~~~~~~~-------~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 --KPPRLEDN-------GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --CCCCCCcc-------cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 01111111 24567899999999999999999999976
No 277
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-39 Score=287.41 Aligned_cols=253 Identities=15% Similarity=0.200 Sum_probs=205.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|...+.| |+|++|.||+++. .++..|++|++..... .....+.+|+..+.+++|+||+++++++..++..++|||
T Consensus 1 ~~~~~~~~i-~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVL-GQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred Ccceeeeee-eecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 367777888 9999999999999 4577999999876543 445778999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++... ..++...+..++.|++.|+.||| + .+++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 80 YMDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred ecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999654 56899999999999999999999 8 999999999999999999999999999987664
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
..... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ........... ......
T Consensus 152 ~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~~~~-~~~~~~ 222 (264)
T cd06623 152 NTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ------PSFFELMQAIC-DGPPPS 222 (264)
T ss_pred cCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc------cCHHHHHHHHh-cCCCCC
Confidence 43321 1233478899999999988899999999999999999999999875431 01111111111 111111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
... . ..+..+.+++.+||+.+|++|||+.++++.
T Consensus 223 ~~~----~-------~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 LPA----E-------EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCc----c-------cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111 0 145789999999999999999999999873
No 278
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=283.86 Aligned_cols=255 Identities=19% Similarity=0.216 Sum_probs=215.2
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeec----CC
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLE----AE 130 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~ 130 (350)
..|++|++...++|-|-.|.|-.+.. ..+..+|+|.+.+. ....+|+++.-+. .|||||++++++.+ ..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 35788888776669999999999998 66678899988654 4567888887776 59999999999874 34
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC---CCceeEc
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE---EYAAKLF 207 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~---~~~~kl~ 207 (350)
.+.+|||.++||.|+..+..... ..+++.++-.|+.||+.|+.||| +.+|.||||||+|+|... |..+||+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~---~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD---QAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEec
Confidence 77899999999999999977543 57999999999999999999999 999999999999999964 5678999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
|||+|+...... ...+.+.||.|.|||++....|....|+||+||++|-|++|.+||++.+. .-+...+..
T Consensus 207 DfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg------~aispgMk~ 277 (400)
T KOG0604|consen 207 DFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKR 277 (400)
T ss_pred ccccccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC------ccCChhHHh
Confidence 999998765422 34566789999999999999999999999999999999999999997654 233444566
Q ss_pred HHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 FIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
-+..+.+...+|.+ +..++...++++.+|..+|.+|.|+.+++.
T Consensus 278 rI~~gqy~FP~pEW---------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 278 RIRTGQYEFPEPEW---------SCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HhhccCccCCChhH---------hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 66777777777766 477889999999999999999999999875
No 279
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.5e-40 Score=299.24 Aligned_cols=253 Identities=18% Similarity=0.177 Sum_probs=201.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|...+.| |+|++|.||++.. .++..||+|.+..... ...+.+.+|+.++..++||||+++++.+.+....++|
T Consensus 1 ~~y~~~~~i-g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLL-GKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeee-cCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 367778888 9999999999999 4577999999876432 2456688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+.+++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++...
T Consensus 80 ~e~~~~~~L~~~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 80 MDYCPGGELFRLLQRQPG---KCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred EEecCCCCHHHHHHhCCC---CccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 999999999999864322 46889999999999999999999 999999999999999999999999999998654
Q ss_pred CCCCcc---------------------------ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 018816 216 PEGKTH---------------------------IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGH 268 (350)
Q Consensus 216 ~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 268 (350)
...... .......|+..|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 322110 01112357889999999998889999999999999999999999987
Q ss_pred CCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 018816 269 LSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT----MIDVAK 340 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt----~~evl~ 340 (350)
.... .......... ... .... ...+..+.+++.+||+.+|++||| +++++.
T Consensus 234 ~~~~---------~~~~~~~~~~-~~~-----~~~~------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 234 GSNR---------DETFSNILKK-EVT-----FPGS------PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCch---------HHHHHHHhcC-Ccc-----CCCc------cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 4321 0111111111 000 0000 124578999999999999999999 777776
No 280
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.7e-39 Score=291.25 Aligned_cols=247 Identities=18% Similarity=0.219 Sum_probs=199.0
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
|...+.| |+|++|.||++.. .++..|++|++........+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus 21 ~~~~~~l-g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKI-GEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEe-ccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3334567 9999999999998 5677899999866554556678899999999999999999999999999999999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT 220 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 220 (350)
+++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+........
T Consensus 100 ~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 100 GGALTDIVTH------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred CCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 9999999865 35789999999999999999999 99999999999999999999999999998765533221
Q ss_pred cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 221 HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ...... ..... .+.
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---------~~~~~~-~~~~~----~~~ 234 (285)
T cd06648 171 --RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---------LQAMKR-IRDNL----PPK 234 (285)
T ss_pred --ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---------HHHHHH-HHhcC----CCC
Confidence 12234588999999999888899999999999999999999999864321 111111 11111 111
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+... ...+..+.+++.+||+.+|++|||+.++++
T Consensus 235 ~~~~------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 235 LKNL------HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred Cccc------ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1100 124467999999999999999999999986
No 281
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-39 Score=292.15 Aligned_cols=261 Identities=17% Similarity=0.148 Sum_probs=200.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 135 (350)
++|...+.| |.|++|.||++.+ .++..+|+|.+..... .....+.+|+.++++++||||+++++++.+. +.+++|
T Consensus 1 ~~~~~~~~l-g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRL-GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEe-ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 367778888 9999999999999 5667889998865432 3456789999999999999999999988653 468999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++..... ....++......++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 80 ~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999987653211 1146888999999999999999999 999999999999999999999999999998755
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... ...... ...........
T Consensus 156 ~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~ 226 (287)
T cd06621 156 VNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIE----LLSYIVNMPNP 226 (287)
T ss_pred ccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHH----HHHHHhcCCch
Confidence 33221 1234788999999999889999999999999999999999998754321 011111 11222211111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+....... ...++.+.+++.+||+.+|++|||+.|+++
T Consensus 227 ~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 227 ELKDEPGNG------IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhccCCCCC------CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 111111100 134567999999999999999999999997
No 282
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.2e-39 Score=286.57 Aligned_cols=254 Identities=16% Similarity=0.161 Sum_probs=201.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeec--CCcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLE--AEMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 135 (350)
+|+..+.| |+|+||.||++.. .++..|++|.+... .....+.+.+|+.++++++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETI-GKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred Cceeeeee-ccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 46677788 9999999999998 56678999988643 23445678899999999999999999998764 4467899
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccC--CCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGF--PQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
|||+++++|.+++..... ....+++..++.++.+|+.||.|||..+ +.+++|+||+|+||+++.++.+||+|||++.
T Consensus 80 ~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred ehhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999999864321 1257899999999999999999999543 6789999999999999999999999999988
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
........ .....+++.|+|||++.+..++.++|+||||+++++|++|..||..... ......+....
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~ 226 (265)
T cd08217 159 ILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----------LQLASKIKEGK 226 (265)
T ss_pred cccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH----------HHHHHHHhcCC
Confidence 76543321 2233589999999999988899999999999999999999999874321 11122222221
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+. ...+..+.+++.+||+.+|++|||+.+|++
T Consensus 227 ~~~~~------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 FRRIP------------YRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCCCc------------cccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11111 144567999999999999999999999986
No 283
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=313.03 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=214.6
Q ss_pred ccccccCCCceEEEEEEE-CCCc----eEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 65 RNITIDEIEGYILYMGFL-RDRG----PILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~-~~~~----~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
..+| |+|+||+||+|.+ ..+. +||||.+.... .....++..|+-+|.+|+|||+++++|+|.... +.||++|
T Consensus 701 ~kvL-GsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 701 DKVL-GSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hcee-ccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 4567 9999999999999 3333 89999987654 345678999999999999999999999998766 8899999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
++.|+|.++++... .++.....+.|+.|||+|+.||| .++++||||..+|||+.+-.++|+.|||+++.....
T Consensus 779 mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred cccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999997654 57889999999999999999999 999999999999999999999999999999998877
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
..........-.+.|||-|.+....|+.++|||||||++||++| |..|++... ...+.++++.+.. .-
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~----------~~eI~dlle~geR-Ls 920 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP----------AEEIPDLLEKGER-LS 920 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC----------HHHhhHHHhcccc-CC
Confidence 66555444445778999999999999999999999999999998 889887543 2334444544332 11
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhcC
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~~ 349 (350)
.| ..++-++.-++.+||..|+..||+++++..++.++.+.+
T Consensus 921 qP-----------piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 921 QP-----------PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CC-----------CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 11 156778999999999999999999999999999987654
No 284
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-39 Score=292.09 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=199.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++|.....| |+|++|.||++.+ .++..||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~i-g~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTL-GTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEe-ecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 467788888 9999999999999 566799999886542 23346688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++... ..++...+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++...
T Consensus 80 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~ 151 (290)
T cd05580 80 MEYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRV 151 (290)
T ss_pred EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCcccc
Confidence 9999999999998654 56899999999999999999999 899999999999999999999999999998776
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
... .....+++.|+|||.+.+...+.++|+||||+++|+|++|..||..... ............
T Consensus 152 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~~- 215 (290)
T cd05580 152 KGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP----------IQIYEKILEGKV- 215 (290)
T ss_pred CCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----------HHHHHHHhcCCc-
Confidence 443 2233488999999999888889999999999999999999999874321 111111111111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
.+.+ ..+..+.+++.+||+.||.+|| ++.+++.
T Consensus 216 ~~~~------------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 RFPS------------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred cCCc------------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1111 2346788999999999999999 7777764
No 285
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-41 Score=309.49 Aligned_cols=241 Identities=19% Similarity=0.234 Sum_probs=192.5
Q ss_pred ccccCCCceEEEEEEE-CCCceEEE--EEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc--CeEEeecC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILV--MKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEM--PALVYEPA 139 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vai--k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~ 139 (350)
+| |+|+|.+||+|.+ ..|-.||= .++.+- .+...++|..|+.+|+.|+||||++++.+|.+... +-+|+|.+
T Consensus 47 vL-GrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 47 VL-GRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hc-ccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 45 9999999999999 55555552 222222 23445889999999999999999999999997665 78899999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccCCCccCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~ 218 (350)
..|+|..|+.+. +.++......|++||+.||.|||+. ..+|+|||||.+||+|+.+ |.|||+|+|+|......
T Consensus 126 TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 126 TSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999765 5788899999999999999999976 6799999999999999864 89999999999876544
Q ss_pred CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.. ...+|||.|||||.+. ..|+...||||||+.++||+|+..||..+.. .+....+.........+.
T Consensus 200 ~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n--------~AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 200 HA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN--------PAQIYKKVTSGIKPAALS 266 (632)
T ss_pred cc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC--------HHHHHHHHHcCCCHHHhh
Confidence 32 2356999999999886 7799999999999999999999999986643 122222322221221111
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. -..+++.+||.+||.. .++|||+.|+|.
T Consensus 267 k------------V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 267 K------------VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred c------------cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1 1124789999999999 999999999986
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.5e-39 Score=285.44 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=200.2
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|++|.||+|.. .++..|++|.+..... ...+.+.+|+.++++++|+||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~l-g~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKI-GGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEe-ecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 36667778 9999999999998 5677999999866543 356788999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 80 YCSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred cCCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence 99999999998653 35788999999999999999999 99999999999999999999999999999877654
Q ss_pred CCcccc--ccccccCCCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 218 GKTHIK--ASTAIGSLEFAAPEYLTTGY---YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 218 ~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...... .....+++.|+|||++.+.. ++.++||||||+++|++++|..||..... . ...... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-------~-~~~~~~-~~~~ 222 (264)
T cd06626 152 NTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-------E-FQIMFH-VGAG 222 (264)
T ss_pred CCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-------h-HHHHHH-HhcC
Confidence 332111 11234788999999998766 88999999999999999999999874321 0 001111 1111
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+.+ . ...+..+.+++.+||+.+|++|||+.+++.
T Consensus 223 ~~~~~~~----~------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 HKPPIPD----S------LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCCc----c------cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111111 0 123567889999999999999999999874
No 287
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.8e-40 Score=293.21 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=193.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHH-HHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVF-ASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|+....| |+|+||.||++.+ .++..||+|++..... ....++..|+.+ ++.++||||+++++++..++..+++|
T Consensus 1 ~~~~~~~~i-g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEEL-GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEe-cccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 467888888 9999999999999 5677999999865432 234456667665 56668999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQ-PVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||++ ++|.+++....... ..+++..++.++.||+.||.||| ++ +++|+||||+||+++.++.+||+|||.+...
T Consensus 80 e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKG-LTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhc-ccHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9996 68888775432221 46899999999999999999999 76 9999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTT----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...... ..........
T Consensus 155 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~ 223 (283)
T cd06617 155 VDSVA---KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--------FQQLKQVVEE 223 (283)
T ss_pred ccccc---cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--------HHHHHHHHhc
Confidence 33211 122347889999998865 34689999999999999999999998632110 0111111111
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. +... ....+..+.+++.+||..+|++|||+.++++
T Consensus 224 -~~----~~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 -PS----PQLP-------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -CC----CCCC-------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 1110 0134567899999999999999999999986
No 288
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.7e-39 Score=290.95 Aligned_cols=263 Identities=17% Similarity=0.152 Sum_probs=199.2
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|++|.||+|.+ .++..|++|++.... ......+.+|+.++++++||||+++++++.++...++|||
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRI-GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeec-ccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 36667788 9999999999998 567799999987543 2335678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+ +++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 80 YM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred cc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 99 999999986532 46899999999999999999999 99999999999999999999999999999877654
Q ss_pred CCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC---
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG--- 293 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (350)
... .......++..|+|||++.+. .++.++||||||+++++|++|.+||..... ..........+....
T Consensus 152 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07832 152 EEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND------IEQLAIVFRTLGTPNEET 224 (286)
T ss_pred CCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH------HHHHHHHHHHcCCCChHH
Confidence 322 112234588999999998754 468999999999999999999877754321 111111111100000
Q ss_pred ---------C-CccCccccCC-CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 ---------Y-MNIDPVIVGD-RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ---------~-~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ....+..... ..... ...+..+.+++.+||+.+|++|||+++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 225 WPGLTSLPDYNKITFPESKPIPLEEIF-PDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HhhccCcchhhcccCCCCCcchHHHhC-CCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0000000000 00000 123578999999999999999999999986
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-39 Score=295.28 Aligned_cols=246 Identities=20% Similarity=0.255 Sum_probs=195.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
+.|...+.| |+|+||.||+|.. .++..||+|.+.... ......+.+|+.+++.++||||+++.++|.+.+..++|
T Consensus 15 ~~y~~~~~l-g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREI-GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheee-cCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 346667778 9999999999998 567799999885432 23345688999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||++ |++.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 94 ~e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 94 MEYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred HHhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceec
Confidence 99997 57777664322 46899999999999999999999 999999999999999999999999999998755
Q ss_pred CCCCccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
... ....+++.|+|||++. ...++.++||||||+++|+|++|.+||...... .... .....
T Consensus 166 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---------~~~~-~~~~~ 229 (307)
T cd06607 166 SPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---------SALY-HIAQN 229 (307)
T ss_pred CCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH---------HHHH-HHhcC
Confidence 322 2334788999999874 356889999999999999999999998643221 0011 11111
Q ss_pred CCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 293 GYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...... ....+..+.+++.+||+.+|++||++.+|+..
T Consensus 230 ~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 230 DSPTLS-----------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCCCC-----------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 111100 12455679999999999999999999999873
No 290
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6e-40 Score=293.80 Aligned_cols=264 Identities=14% Similarity=0.107 Sum_probs=194.7
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|++|.||+|.+ .++..|++|.+..... .....+.+|+.++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~l-~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKI-GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEe-cccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 36667778 9999999999999 5677899998864321 223567789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ ++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 80 YCD-QDLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 151 (284)
T ss_pred cCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence 997 57877765432 46899999999999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH----------
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE---------- 286 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 286 (350)
... ......+++.|+|||++.+. .++.++|||||||++|+|++|..|+...... ........
T Consensus 152 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07839 152 PVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-----DDQLKRIFRLLGTPTEES 224 (284)
T ss_pred CCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-----HHHHHHHHHHhCCCChHH
Confidence 221 12233478899999998765 4789999999999999999999886543221 00000000
Q ss_pred -HHHHhcCCCccCccccCCCC-ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 -KFIRSNGYMNIDPVIVGDRS-CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...........-+....... .......+..+.+++.+||+.||.+|||+.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 225 WPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000000000000000 0000134567899999999999999999999975
No 291
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.9e-40 Score=293.21 Aligned_cols=264 Identities=19% Similarity=0.213 Sum_probs=197.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|+..+.| |+|++|.||+|.+ .++..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~l-g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLV-GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeee-ccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 367777888 9999999999999 4577899998765432 23456889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|..+.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07846 80 EFVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 151 (286)
T ss_pred ecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence 999999998876543 35899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH-----
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR----- 290 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 290 (350)
.... ......++..|+|||++.+. .++.++||||||+++|+|++|.+||...... ...........
T Consensus 152 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~ 223 (286)
T cd07846 152 APGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI------DQLYHIIKCLGNLIPR 223 (286)
T ss_pred CCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH------HHHHHHHHHhCCCchh
Confidence 3321 12233478899999998753 4788999999999999999999988643211 00000000000
Q ss_pred ------hcC--CCccCccccCCCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 ------SNG--YMNIDPVIVGDRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ------~~~--~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... .....+........ ......+..+.+|+.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 224 HQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 00000000000000 000134567999999999999999999999875
No 292
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-39 Score=288.89 Aligned_cols=256 Identities=21% Similarity=0.252 Sum_probs=200.1
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeecCC----
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLEAE---- 130 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~---- 130 (350)
..+++|.....| |+|++|.||+|.. .++..+++|.+..... ..+.+.+|+.+++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 3 DPTGIFELVEVI-GEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred Cchhheeheeee-cCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 356889999998 9999999999999 4566889988765543 346788999999999 6999999999997644
Q ss_pred --cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 131 --MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 131 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
..++||||+++++|.+++...... ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECC
Confidence 489999999999999988643211 146899999999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
||.+........ ......++..|+|||++.. ..++.++|||||||++|+|++|..||...... .
T Consensus 157 ~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---------~ 225 (275)
T cd06608 157 FGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---------R 225 (275)
T ss_pred Cccceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---------H
Confidence 999876543221 2233458899999998754 24678999999999999999999998643210 1
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..... ..... +.+. .....+..+.+|+.+||..||++|||+.+|++
T Consensus 226 ~~~~~-~~~~~----~~~~------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 226 ALFKI-PRNPP----PTLK------SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHh-hccCC----CCCC------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 11111 1111 01235568999999999999999999999985
No 293
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.4e-39 Score=294.24 Aligned_cols=274 Identities=18% Similarity=0.194 Sum_probs=196.7
Q ss_pred cccccccccCCCceEEEEEEEC---CCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCe
Q 018816 62 YSMRNITIDEIEGYILYMGFLR---DRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPA 133 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~---~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 133 (350)
|.....| |+|++|.||+|... ++..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+. ...+
T Consensus 2 y~~~~~i-g~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCI-GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEe-ccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 5667777 99999999999993 46799999987632 23346678899999999999999999999988 7899
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC----CCceeEccc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE----EYAAKLFDF 209 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~----~~~~kl~Df 209 (350)
+||||+++ +|.+.+..........++...+..++.||+.||.||| +.+++|+||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999974 6776664332222236889999999999999999999 999999999999999999 999999999
Q ss_pred CCCccCCCCCc-cccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 210 SLSKSIPEGKT-HIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 210 g~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
|++........ ........+++.|+|||++.+. .++.++|+|||||++++|++|.+||.................+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886643322 1122334578899999988764 588999999999999999999999975543210000000001111
Q ss_pred HHHhcC---------------CCc-cCccccCCCC-ccchH------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 FIRSNG---------------YMN-IDPVIVGDRS-CFRKE------EKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 ~~~~~~---------------~~~-~~~~~~~~~~-~~~~~------~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+..-. ... .+........ ..... ..+..+.+++.+||+.||++|||+.+++.
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 110000 000 0000000000 00000 23457899999999999999999999975
No 294
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.9e-39 Score=284.91 Aligned_cols=250 Identities=20% Similarity=0.243 Sum_probs=199.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++.++|+||+++++.+.++...++|+|
T Consensus 1 ~~~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKI-GEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEe-cCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 46677788 9999999999999 556788999886532 1334567899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 216 (350)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++ .++|+|||.+....
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 80 YCDGGDLMKRINRQRG---VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 9999999999865321 35789999999999999999999 89999999999999999885 46999999987664
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... ......|++.|+|||++.+..++.++|+||||+++++|++|..||..... ......... .....
T Consensus 154 ~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~-~~~~~ 221 (257)
T cd08225 154 DSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL---------HQLVLKICQ-GYFAP 221 (257)
T ss_pred CCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHhc-ccCCC
Confidence 3322 12233488999999999888899999999999999999999999863321 112222111 11111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
..+ ..+..+.+++.+||..+|++|||+.+|++.
T Consensus 222 ~~~------------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 ISP------------NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCC------------CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111 234579999999999999999999999863
No 295
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.8e-39 Score=280.99 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=203.5
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
+|+..+.| |+|++|.||++.. .++..+++|++..........+.+|+..+++++|+|++++++++..+...++++||+
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKI-GKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred Cceeeeee-ccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 46667788 9999999999999 467789999997765455678999999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.... ..+++..+..++.+++.||.+|| ..+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 80 SGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999986542 46899999999999999999999 8999999999999999999999999999987765443
Q ss_pred ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 220 THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
. .....++..|+|||.+....++.++|+||||+++++|++|..||..... ...... ...........
T Consensus 153 ~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~-~~~~~~~~~~~ 219 (253)
T cd05122 153 A---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP---------MKALFK-IATNGPPGLRN 219 (253)
T ss_pred c---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch---------HHHHHH-HHhcCCCCcCc
Confidence 2 2334488899999999888899999999999999999999999874321 011111 11111111110
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ...+..+.+++.+||+.||++|||+.++++
T Consensus 220 ----~------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ----P------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----c------cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 022467999999999999999999999985
No 296
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.3e-39 Score=292.10 Aligned_cols=264 Identities=17% Similarity=0.140 Sum_probs=197.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh-----hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY-----ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
+|...+.| |+|++|.||+|.. .++..|++|++...... ....+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~y~~~~~l-g~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKL-GEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred Cceeeeee-eeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence 36667777 9999999999998 56779999998765322 23456789999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+ +++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 80 v~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeee
Confidence 99999 899999986542 36899999999999999999999 99999999999999999999999999999977
Q ss_pred CCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
...... ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...... ..............
T Consensus 152 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~------~~~~~~~~~~~~~~ 223 (298)
T cd07841 152 FGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI------DQLGKIFEALGTPT 223 (298)
T ss_pred ccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH------HHHHHHHHHcCCCc
Confidence 654322 1222336788999998865 45789999999999999999998777643221 10000000000000
Q ss_pred C------Ccc-CccccCCCCcc----chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 294 Y------MNI-DPVIVGDRSCF----RKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 294 ~------~~~-~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
. ... +.......... .....+..+.+++.+||+.+|++|||+.+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 224 EENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 000 00000000000 001345788999999999999999999999873
No 297
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-39 Score=313.04 Aligned_cols=271 Identities=16% Similarity=0.148 Sum_probs=188.5
Q ss_pred HhcCcccccccccCCCceEEEEEEECC--CceEEEE------------------EecccchhhHHHHHHHHHHHHhcCCC
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLRD--RGPILVM------------------KYRKSVRYASERCFNNIVFASQMNHK 117 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~~--~~~vaik------------------~~~~~~~~~~~~~~~E~~~l~~l~h~ 117 (350)
..++|.....| |+|+||.||++..+. +..++.| ++. ........+.+|+.++.+++||
T Consensus 146 ~~~~Y~ii~~L-G~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 146 FLAHFRVIDDL-PAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhccEEEeEe-cCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCC
Confidence 45789999999 999999999987632 1111111 111 1112345678999999999999
Q ss_pred CccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceE
Q 018816 118 SILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197 (350)
Q Consensus 118 niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nil 197 (350)
||+++++++.+.+..++|+|++. ++|.+++...............+..++.||+.||.||| +++|+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEE
Confidence 99999999999999999999995 57777765432211123446678889999999999999 999999999999999
Q ss_pred eCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 018816 198 FQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277 (350)
Q Consensus 198 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 277 (350)
++.++.+||+|||++..+...... ......||+.|+|||++.+..++.++|||||||++|||++|..++...... ..
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~--~~ 376 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG--KP 376 (501)
T ss_pred ECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC--CH
Confidence 999999999999999876443221 122345899999999999999999999999999999999987543321110 00
Q ss_pred cchHHH-----------------HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 278 NFFITD-----------------RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 278 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+.. ....++...........+ .........+..+.+++.+||+.||++|||+.|++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSV---PPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccch---hhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000 111111110000000000 000000122356788899999999999999999986
No 298
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.2e-39 Score=288.27 Aligned_cols=260 Identities=19% Similarity=0.189 Sum_probs=195.9
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+..+.| |.|++|.||+|+. .++..|++|++..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKI-GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred Cceeeeee-cCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 47777888 9999999999998 5677899998864422 233568899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+. ++|.+++..... ..+++..+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~-~~l~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~ 152 (284)
T cd07860 80 FLH-QDLKKFMDASPL---SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152 (284)
T ss_pred ccc-cCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence 995 688888865322 46889999999999999999999 99999999999999999999999999999876543
Q ss_pred CCccccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC--C
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG--Y 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 294 (350)
... ......+++.|+|||++.+.. ++.++|+||||+++|+|++|+.||...... ....+...... .
T Consensus 153 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---------~~~~~~~~~~~~~~ 221 (284)
T cd07860 153 PVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGTPD 221 (284)
T ss_pred Ccc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHHHhCCCC
Confidence 221 122233688999999887654 688999999999999999999998643221 01111111000 0
Q ss_pred Ccc-------------CccccC-CCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNI-------------DPVIVG-DRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~-------------~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... .+.... ..... ....+..+.+++.+||+.||++|||+.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 222 EVVWPGVTSLPDYKPSFPKWARQDFSKV-VPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhhhhhHHHHHHhhcccccccCHHHH-cccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 000000 00000 0023456889999999999999999999985
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.9e-39 Score=288.27 Aligned_cols=252 Identities=20% Similarity=0.266 Sum_probs=203.4
Q ss_pred HhcCcccccccccCCCceEEEEEEEC-CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
.+++|.....+ |+|++|.||+|.+. ++..|++|.+..... ..+.+.+|+.++++++|+||+++++++......++|+
T Consensus 17 ~~~~~~~~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKI-GEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhc-cCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45567777777 99999999999994 677999999876544 4567889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|.+++.... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 95 e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 95 EYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred eccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 9999999999997642 37899999999999999999999 9999999999999999999999999999886554
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... ......++..|+|||++.+..++.++|+||||+++|+|++|..||...... ....... ......
T Consensus 168 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~---------~~~~~~~-~~~~~~ 235 (286)
T cd06614 168 KEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL---------RALFLIT-TKGIPP 235 (286)
T ss_pred cchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHH-hcCCCC
Confidence 3221 122334788999999998888999999999999999999999998643221 1111111 111110
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. . ....+..+.+++.+||+.+|.+|||+.+++.
T Consensus 236 ~~----~------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 LK----N------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred Cc----c------hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00 0 0124567999999999999999999999986
No 300
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.5e-39 Score=290.14 Aligned_cols=265 Identities=18% Similarity=0.212 Sum_probs=199.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|+..+.| |+|++|.||+|.+ .++..|++|.+.... ....+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~i-~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVV-GEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEe-cccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 367778888 9999999999999 456689999886542 233467889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++++.+..+.... ..+++..+..++.+|+.||.||| +.+++|+||+|+||+++.++.+||+|||++....
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~ 151 (288)
T cd07833 80 EYVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALR 151 (288)
T ss_pred ecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccC
Confidence 999987776655432 45899999999999999999999 9999999999999999999999999999987765
Q ss_pred CCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC--
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG-- 293 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (350)
..... ......++..|+|||++.+. .++.++|+||||+++|+|++|.+||...... ..............
T Consensus 152 ~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~ 224 (288)
T cd07833 152 ARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI------DQLYLIQKCLGPLPPS 224 (288)
T ss_pred CCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHH
Confidence 43321 12234578899999999888 7899999999999999999999998743221 00000000000000
Q ss_pred ---CCccCccccC-----CCCc-----cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 ---YMNIDPVIVG-----DRSC-----FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ---~~~~~~~~~~-----~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....++...+ .... ..+...+..+.+|+.+||..+|++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000000 0000 001123678999999999999999999999875
No 301
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2e-39 Score=286.33 Aligned_cols=247 Identities=16% Similarity=0.137 Sum_probs=200.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
+|...+.| |.|+||.||+|.+ .++..||+|.+..... ...+.+.+|+.++++++||||+++++++.++...++|+
T Consensus 1 ~y~~~~~i-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVI-GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEe-ccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 46777888 9999999999999 4577999999875432 34567889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||+++++|.+++... .+++...+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||.+....
T Consensus 80 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 80 DLLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVT 151 (258)
T ss_pred eCCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccC
Confidence 999999999998653 47889999999999999999999 9999999999999999999999999999987664
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.... .....++..|+|||++.+..++.++|+||||+++|+|++|..||...... ........... ....
T Consensus 152 ~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-~~~~ 220 (258)
T cd05578 152 PDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-------IRDQIRAKQET-ADVL 220 (258)
T ss_pred CCcc---ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-------HHHHHHHHhcc-cccc
Confidence 4321 22334788999999998888999999999999999999999998754321 11111111111 0111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH--HHHH
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM--IDVA 339 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~--~evl 339 (350)
.. ...+..+.+++.+||+.||.+||++ .+++
T Consensus 221 ~~------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 YP------------ATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred Cc------------ccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11 1344788999999999999999999 6554
No 302
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.4e-39 Score=290.91 Aligned_cols=262 Identities=17% Similarity=0.178 Sum_probs=194.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
++|.....| |+|++|.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 5 ~~y~~~~~l-g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKL-GEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEE-eecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 578888888 9999999999999 4667999999865432 223456789999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ ++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 84 ~~~-~~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 84 YLD-TDLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred cCC-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 997 48998886532 46789999999999999999999 99999999999999999999999999999865432
Q ss_pred CCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC--
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY-- 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (350)
... ......++..|+|||++.+ ..++.++||||||+++|+|++|..||...... ................
T Consensus 156 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07844 156 PSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-----EDQLHKIFRVLGTPTEET 228 (291)
T ss_pred CCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-----HHHHHHHHHhcCCCChhh
Confidence 211 1122236888999998875 45889999999999999999999998644311 0000000000000000
Q ss_pred ----------C-----ccC-ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 ----------M-----NID-PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ----------~-----~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ... ..+...... ......+.+++.+||+.+|++|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 229 WPGVSSNPEFKPYSFPFYPPRPLINHAPR---LDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhhhccccccccccccCChhHHHhCcC---CCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 000 000000000 011257789999999999999999999875
No 303
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=305.47 Aligned_cols=246 Identities=18% Similarity=0.209 Sum_probs=202.7
Q ss_pred ccccccCCCceEEEEEEECCCceE-EEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCc
Q 018816 65 RNITIDEIEGYILYMGFLRDRGPI-LVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~~~~~v-aik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s 143 (350)
...| |.|+||.||++..++.+.+ |.|.+........++++-||.||...+||+||.+++.|...+.++++.|||+||.
T Consensus 37 iGEL-GDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA 115 (1187)
T KOG0579|consen 37 IGEL-GDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA 115 (1187)
T ss_pred Hhhh-cCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence 3456 9999999999999766555 4566766666778899999999999999999999999999999999999999999
Q ss_pred hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccc
Q 018816 144 LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223 (350)
Q Consensus 144 L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 223 (350)
+...+..-. ..++..++..++.|++.||.||| +++|||||||..|||+.-+|.++|+|||.+.... .....
T Consensus 116 VDaimlEL~----r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qk 186 (1187)
T KOG0579|consen 116 VDAIMLELG----RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQK 186 (1187)
T ss_pred HhHHHHHhc----cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hHHhh
Confidence 988775421 67999999999999999999999 9999999999999999999999999999876543 23334
Q ss_pred ccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 224 ASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 224 ~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.....|||.|||||+... .+|..++||||||++|.||..+.+|-....+ -..+.+.........+.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------MRVllKiaKSePPTLlq 257 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLKIAKSEPPTLLQ 257 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---------HHHHHHHhhcCCCcccC
Confidence 556779999999998763 5799999999999999999999999765443 12222222222233333
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
| ...+..+.+++..||..||..||++.++++
T Consensus 258 P-----------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 P-----------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred c-----------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 3 356678999999999999999999999986
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.8e-39 Score=291.90 Aligned_cols=264 Identities=17% Similarity=0.150 Sum_probs=195.8
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
++++|...+.| |+|+||.||+|.. .++..|++|.+..... .....+.+|+.+++.++|+||+++.+++.+++..++|
T Consensus 3 ~~~~y~~~~~i-g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKL-GEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEE-EecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 35788888888 9999999999998 5677999999865432 2234577899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||++ ++|.+++.... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred Eeccc-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 99996 67777664432 35778889999999999999999 899999999999999999999999999998754
Q ss_pred CCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC-
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG- 293 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (350)
..... ......+++.|+|||++.+. .++.++|+|||||++|+|++|..||...... .......+...+
T Consensus 154 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--------~~~~~~~~~~~~~ 223 (291)
T cd07870 154 SIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--------FEQLEKIWTVLGV 223 (291)
T ss_pred CCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--------HHHHHHHHHHcCC
Confidence 33221 12233478899999998764 5789999999999999999999998744321 011111110000
Q ss_pred ---------------CCccCccccC-CCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 ---------------YMNIDPVIVG-DRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ---------------~~~~~~~~~~-~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.....+.... .... ......+..+.+++.+|+..||++|||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 224 PTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred CChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000 0000 000012457889999999999999999999875
No 305
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-39 Score=292.59 Aligned_cols=256 Identities=18% Similarity=0.233 Sum_probs=192.7
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|.....| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++.++. ||||+++++++..+...+++||
T Consensus 5 ~~~~~~~l-g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEI-GRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHh-CCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 34445667 9999999999999 566799999986543 234567889999999996 9999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|++ +++.++...........+++..+..++.+++.||.||| + .+++||||||+||+++.++.++|+|||++....
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK---EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 985 45554332100011146899999999999999999999 5 499999999999999999999999999987654
Q ss_pred CCCccccccccccCCCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTG---YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
.... .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||..... .......... ..
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~-~~ 227 (288)
T cd06616 160 DSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--------VFDQLTQVVK-GD 227 (288)
T ss_pred cCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--------HHHHHhhhcC-CC
Confidence 3221 1223478899999998876 689999999999999999999999864321 1111111110 01
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.+.+..... ...+..+.+|+.+||+.+|++|||+.+|++.
T Consensus 228 ----~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 ----PPILSNSEE----REFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ----CCcCCCcCC----CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111110 1356789999999999999999999999873
No 306
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.1e-39 Score=293.12 Aligned_cols=246 Identities=21% Similarity=0.257 Sum_probs=194.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|...+.| |+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++|||++++++++.+++..++|||
T Consensus 27 f~~~~~l-g~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 27 FTDLREI-GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhee-ccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 5666778 9999999999998 566789999886432 2334568899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|++ |+|.+.+.... .++++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 106 YCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred CCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 997 57777764322 46899999999999999999999 99999999999999999999999999998865432
Q ss_pred CCccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
. ....+++.|+|||++. .+.++.++|+|||||++|+|++|..||..... ...... +.....
T Consensus 178 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---------~~~~~~-~~~~~~ 241 (317)
T cd06635 178 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYH-IAQNES 241 (317)
T ss_pred c------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---------HHHHHH-HHhccC
Confidence 2 2334888999999874 45688999999999999999999999864321 111111 111111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
.... ....++.+.+++.+||+.+|.+||++.++++.+.
T Consensus 242 ~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 242 PTLQ-----------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCC-----------CccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1000 0134567899999999999999999999998654
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.5e-39 Score=288.96 Aligned_cols=261 Identities=15% Similarity=0.125 Sum_probs=196.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 134 (350)
++|...+.| |+|++|.||+|.+ .++..+++|.+..... .....+.+|+.++.+++||||+++++++... ...++
T Consensus 5 ~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRI-EEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhh-cCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 567778888 9999999999999 4567899999865432 2233567899999999999999999998877 89999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||++ ++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||.+..
T Consensus 84 v~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 84 VMEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred EehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 999997 58988886532 36899999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH--------
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV-------- 285 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-------- 285 (350)
...... ......+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||...... ......
T Consensus 156 ~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~~~~~ 227 (293)
T cd07843 156 YGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI------DQLNKIFKLLGTPT 227 (293)
T ss_pred ccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCc
Confidence 654321 12233478899999988765 4689999999999999999999998754321 000000
Q ss_pred ---HHHHHhcC-------CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 286 ---EKFIRSNG-------YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 286 ---~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+..+..-. .......+....+. ...++.+.+++.+||+.+|++|||+.|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 228 EKIWPGFSELPGAKKKTFTKYPYNQLRKKFPA---LSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hHHHHHhhccchhcccccccccchhhhccccc---cCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000 00000001111110 013567899999999999999999999985
No 308
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1e-38 Score=282.41 Aligned_cols=242 Identities=21% Similarity=0.161 Sum_probs=195.0
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
||.|++|.||+++. .++..|++|.+.... ....+.+.+|+.++++++||||+++++++.+++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 49999999999999 456799999986542 23446788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++... ..++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~ 149 (262)
T cd05572 81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KT 149 (262)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cc
Confidence 9999654 45889999999999999999999 9999999999999999999999999999988765432 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ......... .........|
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~~~~----- 216 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-------DPMEIYNDI-LKGNGKLEFP----- 216 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-------CHHHHHHHH-hccCCCCCCC-----
Confidence 233578899999999888899999999999999999999999875431 011111111 1111000000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPT-----MIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-----~~evl~ 340 (350)
...+..+.+++.+||+.+|++||+ +.|+++
T Consensus 217 ------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 ------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ------cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 122567999999999999999999 777765
No 309
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=295.56 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=200.2
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEeccc--chhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKS--VRYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 135 (350)
...|++...| |+||.+.||++...+.+-+|+|++... +.....-|.+|+..|.+|+ |.+||++++|-..++.+|+|
T Consensus 360 g~~Yeilk~i-G~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQI-GSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhh-cCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3457777788 999999999999987778999987543 3455678999999999995 99999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||- ..+|..+|.... ..++...+..+..||+.++.++| +.||||.||||+|+|+- .|.+||+|||.|..+
T Consensus 439 mE~G-d~DL~kiL~k~~----~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKK----SIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred eecc-cccHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 9976 579999997643 23443478889999999999999 99999999999999984 568999999999999
Q ss_pred CCCCccccccccccCCCCCCccccccCC-----------CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGY-----------YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 284 (350)
....+......-+||+.||+||.+.... .+.++||||||||+|+|+.|++||.... ..
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----------n~ 578 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----------NQ 578 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----------HH
Confidence 8877766666777999999999886432 5689999999999999999999987321 11
Q ss_pred HHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 285 VEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..++ ..+.+|...=.++.. ....++.+++..||..||.+|||+.+||+
T Consensus 579 ~aKl-----~aI~~P~~~Iefp~~---~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 579 IAKL-----HAITDPNHEIEFPDI---PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHH-----HhhcCCCccccccCC---CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1111 122333211111111 11123889999999999999999999986
No 310
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=8.2e-39 Score=287.78 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=195.9
Q ss_pred cccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 66 NITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
..| |+|+||.||++.. .++..||+|++........+.+.+|+.+++.++|+||+++++++..++..++||||+++++|
T Consensus 26 ~~l-g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKI-GEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHc-CCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 345 9999999999999 56779999998655445566788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++.. ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 105 ~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~ 173 (292)
T cd06657 105 TDIVTH------TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RR 173 (292)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--cc
Confidence 998743 35789999999999999999999 89999999999999999999999999998876543221 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ... . ........ +.+...
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~------~~~---~-~~~~~~~~----~~~~~~ 239 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKA---M-KMIRDNLP----PKLKNL 239 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHH---H-HHHHhhCC----cccCCc
Confidence 234588999999999888899999999999999999999999864321 111 1 11111111 111000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+..+.+++.+||+.+|.+||++.+++.
T Consensus 240 ------~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 ------HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ------ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 123456889999999999999999999987
No 311
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=276.47 Aligned_cols=267 Identities=21% Similarity=0.236 Sum_probs=218.7
Q ss_pred cHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeeeeec
Q 018816 51 SSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGCCLE 128 (350)
Q Consensus 51 ~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 128 (350)
+++|+.+.|+. +| |+|+|+.|--++. .++.++|||.+.+...-.+.++.+|++++.+.+ |+||++++++|++
T Consensus 74 ~F~d~YkLt~e-----~L-GeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSE-----LL-GEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHH-----Hh-cCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 46677666643 46 9999999999988 788899999999887677889999999999996 9999999999999
Q ss_pred CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC---cee
Q 018816 129 AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY---AAK 205 (350)
Q Consensus 129 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~---~~k 205 (350)
+..+|||||-|.||+|...|+.. .-+++.++.++..+|+.||.||| .+||.||||||+|||..... -+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cceEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCcee
Confidence 99999999999999999999765 56899999999999999999999 99999999999999997654 479
Q ss_pred EcccCCCccCCCCCc-----cccccccccCCCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC
Q 018816 206 LFDFSLSKSIPEGKT-----HIKASTAIGSLEFAAPEYLT-----TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275 (350)
Q Consensus 206 l~Dfg~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 275 (350)
|+||.+...+..... .....+.+|+..|||||+.. ...|..+.|.||||||+|-|++|.+||...-..+.
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 999988754432221 12234667999999999764 23588999999999999999999999986544321
Q ss_pred C----Cc-chHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 276 G----SN-FFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 276 ~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+ .. -.=+..+...+..+.++..|..+ ...+.+..+++...|..||..|.++..++.
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW---------ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDW---------AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhh---------HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1 11 12334455666666777777766 367788999999999999999999998876
No 312
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.4e-38 Score=280.08 Aligned_cols=251 Identities=20% Similarity=0.203 Sum_probs=203.3
Q ss_pred CcccccccccCCCceEEEEEEEC-CCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCeEE
Q 018816 61 NYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPALV 135 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 135 (350)
+|...+.| |+|++|.||+|... ++..|++|.+..... ...+.+.+|+.++++++||||+++++.+.+. ...+++
T Consensus 1 ~~~~~~~i-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELL-GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEe-eecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 36667778 99999999999994 677999999866542 4567788999999999999999999999988 889999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+||+++++|.+++... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 80 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 80 LEYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred EEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEec
Confidence 9999999999998654 37899999999999999999999 899999999999999999999999999998877
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
.............++..|+|||.+.+..++.++|+||||+++++|++|..||..... ..............
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~- 222 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--------PMAALYKIGSSGEP- 222 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHHHHhccccCCC-
Confidence 554321112334588899999999888899999999999999999999999875431 11111111100001
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+ +...+..+.+++.+||+.+|++||++.+++.
T Consensus 223 ---~~~--------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 ---PEI--------PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---cCC--------CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111 1133578999999999999999999999986
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.5e-39 Score=288.25 Aligned_cols=264 Identities=16% Similarity=0.100 Sum_probs=195.1
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcC-CCCccceeeeeecCCc----
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMN-HKSILKLIGCCLEAEM---- 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~---- 131 (350)
++|+..+.| |+|+||.||+|.+ .++..||+|.+..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~l-g~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKI-GEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEe-cccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 467888888 9999999999999 5677999998755422 22356888999999995 6999999999887665
Q ss_pred -CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEccc
Q 018816 132 -PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDF 209 (350)
Q Consensus 132 -~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Df 209 (350)
.++||||+++ +|.+++..........+++..+..++.||+.||.||| +.+++|+||+|+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999985 8888876533221246899999999999999999999 999999999999999998 899999999
Q ss_pred CCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
|.+........ ......+++.|+|||++.+ ..++.++|+||||+++|+|++|..||...... ......
T Consensus 156 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---------~~~~~~ 224 (295)
T cd07837 156 GLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL---------QQLLHI 224 (295)
T ss_pred ccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---------HHHHHH
Confidence 99876533211 1122246888999998865 45789999999999999999999998753321 111111
Q ss_pred HHh---cCCCcc-----------CccccCC-CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 289 IRS---NGYMNI-----------DPVIVGD-RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 289 ~~~---~~~~~~-----------~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ...... .+..... ..... ...+..+.+++.+||+.||++|||+.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 225 FKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAV-PDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHhCCCChhhCcchhhccchhhcCcccchhHHHhc-cccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 110 000000 0000000 00000 134567899999999999999999999875
No 314
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.9e-39 Score=285.71 Aligned_cols=260 Identities=19% Similarity=0.197 Sum_probs=191.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecC--CcCeEEe
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMN-HKSILKLIGCCLEA--EMPALVY 136 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~ 136 (350)
|...+.| |+|+||.||+|.. .++..||+|++..... .......+|+.++.++. |+||+++++++.+. +..++||
T Consensus 1 y~~~~~l-g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKI-GEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeec-cccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 4455677 9999999999998 5677899998865422 22334557899999885 99999999999987 8899999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++ ++|.+.+.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++. +.+||+|||++....
T Consensus 80 e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 80 ELMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred ecCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 9997 58877775432 46899999999999999999999 999999999999999999 999999999987664
Q ss_pred CCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH---------
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE--------- 286 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 286 (350)
.... .....++..|+|||++.. ..++.++|+|||||++|||++|.+||...... .......
T Consensus 151 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~ 221 (282)
T cd07831 151 SKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL------DQIAKIHDVLGTPDAE 221 (282)
T ss_pred cCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH------HHHHHHHHHcCCCCHH
Confidence 3322 122347889999997654 45789999999999999999999999754321 1111110
Q ss_pred --HHHHhcC-CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 --KFIRSNG-YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....... .....+...+..........+..+.+++.+||+.+|++|||+.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 222 VLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0111000 00000100000000000134678999999999999999999999986
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.1e-39 Score=295.50 Aligned_cols=266 Identities=14% Similarity=0.151 Sum_probs=195.8
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----c
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----M 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 131 (350)
+++|...+.| |+|++|.||+|.+ .++..||+|.+.... ......+.+|+.++++++||||+++++++.... .
T Consensus 4 ~~~y~i~~~l-g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYI-GEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEE-EecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 4789988998 9999999999998 567799999986432 234466788999999999999999999876443 5
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++|+||++ ++|.+.+.. ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccc
Confidence 799999996 588777743 46899999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccc-cccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 212 SKSIPEGKTHI-KASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 212 ~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
+.......... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||...... ..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~------~~~~~~~~~~ 226 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL------HQLNLILGVL 226 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHc
Confidence 87654322211 1223458899999998755 46899999999999999999999998643210 0000000000
Q ss_pred HhcCCCccC----c-------cccCCCC-cc--chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 290 RSNGYMNID----P-------VIVGDRS-CF--RKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 290 ~~~~~~~~~----~-------~~~~~~~-~~--~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
........+ . ....... .. .....+.++.+++.+||+.+|++|||+.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0 0000000 00 000234678999999999999999999999875
No 316
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=293.55 Aligned_cols=246 Identities=18% Similarity=0.187 Sum_probs=202.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
+.|+.-++| |+||||.||-++. ..|+.+|.|++.+... ....-..+|-.+|.+++.+.||.+-..|++.+.+|+|
T Consensus 185 n~F~~~Rvl-GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVL-GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEE-ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 567878888 9999999999998 6677889988866532 3344577899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
+..|.||+|.-+|.+... ..+++..++.++.+|+.||.+|| ..+||+|||||+|||+|++|++.|+|+|+|..+
T Consensus 264 LtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEec
Confidence 999999999999876422 57999999999999999999999 999999999999999999999999999999988
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..+... ...+||.+|||||++.+..|+...|.|||||++|||+.|+.||.....- ...+
T Consensus 338 ~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK------------------vk~e 396 (591)
T KOG0986|consen 338 PEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK------------------VKRE 396 (591)
T ss_pred CCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh------------------hhHH
Confidence 766542 3346999999999999999999999999999999999999998743220 0011
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt 334 (350)
.+|.......... ++.+++++.+|+...|+.||++|.-
T Consensus 397 Evdrr~~~~~~ey-~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 397 EVDRRTLEDPEEY-SDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred HHHHHHhcchhhc-ccccCHHHHHHHHHHHccCHHHhcc
Confidence 1222221111111 1367789999999999999999964
No 317
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.5e-38 Score=279.48 Aligned_cols=250 Identities=17% Similarity=0.165 Sum_probs=196.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc-----chhhHHHHHHHHHHHHhcCCCCccceeeeeecC--Cc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS-----VRYASERCFNNIVFASQMNHKSILKLIGCCLEA--EM 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 131 (350)
.+|...+.| |+|++|.||+|.+ .++..|++|.+... .......+.+|+.++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l-g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLL-GRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeE-ccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence 467888888 9999999999998 56779999987432 123345788999999999999999999998764 45
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
+++++||+++++|.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccc
Confidence 78999999999999998643 45789999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCcc-ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 212 SKSIPEGKTH-IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
+......... .......++..|+|||++.+..++.++|+|||||++|+|++|+.||..... .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~ 223 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA---------MAAIFKIAT 223 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH---------HHHHHHHHc
Confidence 8765322111 111234488999999999888899999999999999999999999874321 111111111
Q ss_pred hcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
......+ +...++.+.+++.+||+ +|..|||+.+++.
T Consensus 224 ~~~~~~~------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 224 QPTKPML------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCCC------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1111111 12455779999999999 5799999998875
No 318
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.6e-38 Score=284.01 Aligned_cols=241 Identities=16% Similarity=0.146 Sum_probs=185.5
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHH---hcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFAS---QMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
||+|+||.||++.. .++..+|+|.+..... .....+.+|..++. ..+||||+.+++++...+..++||||+++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 39999999999999 5677899998865421 11223444544333 34799999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 82 GDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999988653 46899999999999999999999 9999999999999999999999999999987553322
Q ss_pred ccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 222 IKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.....|++.|+|||.+.+ ..++.++|+|||||++|+|++|..||...... .......... .....
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~-----~~~~~ 217 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-------DKHEIDRMTL-----TVNVE 217 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-------CHHHHHHHhh-----cCCcC
Confidence 123358999999999864 45899999999999999999999998743221 0011111100 00111
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAKK 341 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~~ 341 (350)
+ +...+..+.+++.+||+.||++|| |+.++++.
T Consensus 218 ~--------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 L--------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred C--------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1 113456889999999999999999 59888773
No 319
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-38 Score=280.63 Aligned_cols=249 Identities=18% Similarity=0.188 Sum_probs=201.8
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+..+.| |.|++|.||++.. .++..+++|.+.... ......+.+|+.++++++|+||+++++++.+....++|||
T Consensus 1 ~y~~~~~i-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKL-GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeee-cCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 46777788 9999999999988 566789999986532 2345677899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++...... ...+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 80 YAPFGDLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hcCCCCHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 99999999988653211 146889999999999999999999 99999999999999999999999999999877654
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.. .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... ..............+
T Consensus 156 ~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 221 (256)
T cd08530 156 NM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM----------QDLRYKVQRGKYPPI 221 (256)
T ss_pred CC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----------HHHHHHHhcCCCCCC
Confidence 41 2223478899999999988899999999999999999999999864321 111111111111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ...+.++.+++.+||+.+|++|||+.++++
T Consensus 222 ~------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 222 P------------PIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred c------------hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1 145577999999999999999999999985
No 320
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=298.44 Aligned_cols=251 Identities=20% Similarity=0.166 Sum_probs=210.5
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcC
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMP 132 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 132 (350)
......|.....| |+|.|+.|.++++ ..+..||||.+.+..- .....+.+|+.+|..|+|||||+++++......+
T Consensus 52 ~~~vg~y~i~~ti-g~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTI-GKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeee-ccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 3456788888888 9999999999999 6677999999877643 3335588999999999999999999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
|+||||+.+|.+++++.+. +.+....+..++.|+++|++||| +++|||||||++||||+.+.++||+|||++
T Consensus 131 ylV~eya~~ge~~~yl~~~-----gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS 202 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKH-----GRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFS 202 (596)
T ss_pred EEEEEeccCchhHHHHHhc-----ccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccc
Confidence 9999999999999999765 56677889999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY-NEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
..+.... ...+.+|++.|.|||++.+..| .+.+|+||+|+++|.|+.|..||+....
T Consensus 203 ~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------------------- 260 (596)
T KOG0586|consen 203 TFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------------------- 260 (596)
T ss_pred eeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------------------
Confidence 9886544 3556779999999999998875 5899999999999999999999985432
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...-++.+.+.+... ...+.++.+|++++|..+|.+|++++++.+.
T Consensus 261 --k~Lr~rvl~gk~rIp--~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 261 --KELRPRVLRGKYRIP--FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --ccccchheeeeeccc--ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 111112222222111 1445678999999999999999999998763
No 321
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.4e-38 Score=292.40 Aligned_cols=268 Identities=17% Similarity=0.226 Sum_probs=197.5
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecC-----
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEA----- 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 129 (350)
..+.|...+.| |+|+||.||+|.. .++..||+|.+... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~l-g~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPI-GSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEe-ccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 45789988888 9999999999999 56779999998543 223445678899999999999999999987643
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
...++||||++ ++|.+.+.. .++...+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEcc
Confidence 35699999996 588887743 3788889999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcc
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNF 279 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~ 279 (350)
||++........ .....++..|+|||.+.+..++.++|||||||++|+|++|+.||....... +....
T Consensus 162 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 162 FGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred CccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 999986543221 223347889999999999999999999999999999999999987432110 00000
Q ss_pred hHHHH----HHHHHHhcC-C--Ccc----CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 280 FITDR----VEKFIRSNG-Y--MNI----DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 280 ~~~~~----~~~~~~~~~-~--~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..... ......... . ..+ ................++.+.+++.+||+.||++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000 000111100 0 000 0000000000001134567899999999999999999999986
No 322
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.7e-38 Score=283.57 Aligned_cols=244 Identities=15% Similarity=0.157 Sum_probs=192.0
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
||+|+||+||++.. .++..|++|.+..... .....+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 49999999999998 5667899998865321 2344567899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~ 151 (277)
T cd05577 81 KYHIYNVGE---PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KI 151 (277)
T ss_pred HHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cc
Confidence 999865422 36899999999999999999999 9999999999999999999999999999987654321 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....++..|+|||++.+..++.++|+||||+++|+|++|+.||...... . ... .+...... .....
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~-~~~----~~~~~~~~-~~~~~--- 217 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-----V-EKE----ELKRRTLE-MAVEY--- 217 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-----c-cHH----HHHhcccc-ccccC---
Confidence 2334788999999998888999999999999999999999998643321 0 000 01111000 00000
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
+...++.+.+++.+||+.+|++|| ++.+++.
T Consensus 218 -----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 -----PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred -----CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 013356789999999999999999 7777764
No 323
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.8e-38 Score=278.21 Aligned_cols=251 Identities=22% Similarity=0.252 Sum_probs=203.4
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |.|++|.||++.+ +++..|++|++..... .....+.+|+.+++.++|||++++.+.+......++|+|
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQI-GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeee-ccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 46677788 9999999999999 5677999999865432 456678899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++...... ...+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 80 YADGGDLSQKIKKQKKE-GKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred ecCCCcHHHHHHHhhcc-CCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 99999999998754211 157899999999999999999999 89999999999999999999999999999876654
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
... ......+++.|+|||...+..++.++|+||+|+++++|++|..||..... ....... .......+
T Consensus 156 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~-~~~~~~~~ 223 (258)
T cd08215 156 TVD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL---------LELALKI-LKGQYPPI 223 (258)
T ss_pred Ccc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---------HHHHHHH-hcCCCCCC
Confidence 331 22334588899999999888899999999999999999999999864321 1111111 11111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ...+..+.+++.+||..+|++|||+.++++
T Consensus 224 ~------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 P------------SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred C------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 133467899999999999999999999985
No 324
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-38 Score=292.31 Aligned_cols=266 Identities=20% Similarity=0.262 Sum_probs=196.4
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhc-CCCCccceeeeeecC--Cc
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQM-NHKSILKLIGCCLEA--EM 131 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~ 131 (350)
..++|.....| |+|+||.||+|.+ .++..||+|++... .......+.+|+.+++++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKL-GKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhh-cCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 45678888888 9999999999998 45678999988542 223445677899999999 999999999988643 36
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||++ ++|.+++.. ..+++..+..++.||+.||.||| +.+|+|+||+|+||+++.++.+||+|||.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred EEEEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 899999997 599888854 25788899999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCcc---ccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 018816 212 SKSIPEGKTH---IKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK 287 (350)
Q Consensus 212 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 287 (350)
+......... .......++..|+|||++.+ ..++.++|+||||+++|+|++|+.||...... ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~------~~~~~~~~ 227 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL------NQLEKIIE 227 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHH
Confidence 8766443221 12223458899999998765 45789999999999999999999998643321 00000000
Q ss_pred H-----------HHhc-CCCccCccccCC---CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 288 F-----------IRSN-GYMNIDPVIVGD---RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 288 ~-----------~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
. +... ....++...... ..... ...+..+.+++.+||+.+|++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 228 VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL-PKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhc-cCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 0000 000000000000 00000 0235678999999999999999999999974
No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.5e-38 Score=286.66 Aligned_cols=267 Identities=16% Similarity=0.152 Sum_probs=193.8
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCc---
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEM--- 131 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 131 (350)
..++|.....| |+|+||.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 10 EVSKYEKLAKI-GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhhheEEEEEe-ecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 34578888888 9999999999999 5677999998854321 223456789999999999999999999876543
Q ss_pred -----CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeE
Q 018816 132 -----PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 132 -----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl 206 (350)
.++||||+. ++|.+.+.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEE
Confidence 499999996 58887775432 36899999999999999999999 899999999999999999999999
Q ss_pred cccCCCccCCCCCcc--ccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 207 FDFSLSKSIPEGKTH--IKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
+|||++......... .......++..|+|||.+.+.. ++.++|+||||+++|+|++|.+||..... .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~------~~~~~ 234 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE------QHQLT 234 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence 999998766432221 1122334788899999887654 78999999999999999999999864322 11111
Q ss_pred HHHHHHHhcCCCccCcc-----------ccCCCCc-----cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 284 RVEKFIRSNGYMNIDPV-----------IVGDRSC-----FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
............ ..+. ....... .........+.+|+.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 235 LISQLCGSITPE-VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHhCCCChh-hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 111111000000 0000 0000000 000012346789999999999999999999985
No 326
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.5e-39 Score=284.56 Aligned_cols=245 Identities=20% Similarity=0.147 Sum_probs=194.2
Q ss_pred ccCCCceEEEEEEEC-CCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFLR-DRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~~-~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
+|+|+||.||++.+. ++..+++|.+..... ...+.+.+|+.++.+++||||+++++.+.+....++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 399999999999994 577999999865433 3456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCc----
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKT---- 220 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 220 (350)
.+++... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9998653 46899999999999999999999 99999999999999999999999999999876543321
Q ss_pred --cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 221 --HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 221 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
........++..|+|||.......+.++|+||||+++|+|++|..||..... .... ..........
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---------~~~~-~~~~~~~~~~-- 220 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---------EEIF-QNILNGKIEW-- 220 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---------HHHH-HHHhcCCcCC--
Confidence 0112234478899999999888899999999999999999999999874321 1111 1111111100
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
+. . ...+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 221 ~~---~------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 221 PE---D------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred Cc---c------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 00 0 01256789999999999999999995554444
No 327
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.9e-38 Score=276.95 Aligned_cols=247 Identities=19% Similarity=0.255 Sum_probs=201.6
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|+....| |+|++|.||++.. .++..|++|.+..... ...+.+.+|++++.+++|||++++++++.+.+..+++||
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLI-GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEE-cccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 36667778 9999999999998 4666899999876643 455678999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 80 YAENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred cCCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 99999999998654 46899999999999999999999 99999999999999999999999999999887654
Q ss_pred CCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCcc
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNI 297 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
.... .....++..|+|||...+..++.++|+||||+++++|++|..|+..... ........ ......+
T Consensus 152 ~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---------~~~~~~~~-~~~~~~~ 219 (254)
T cd06627 152 VSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---------MAALFRIV-QDDHPPL 219 (254)
T ss_pred Cccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHh-ccCCCCC
Confidence 3321 2233478899999998887889999999999999999999999864321 01111111 1111111
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 298 DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
. ...+..+.+++.+||+.+|++|||+.+++.
T Consensus 220 ~------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 P------------EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred C------------CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1 133467889999999999999999999874
No 328
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.8e-38 Score=284.13 Aligned_cols=260 Identities=18% Similarity=0.180 Sum_probs=194.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
|+..+.| |.|++|.||+|.+ .++..|++|++..... .....+.+|+.++++++||||+++++++.+++..+++|||
T Consensus 1 y~~~~~l-~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKI-GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEe-cCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 4556677 9999999999998 5777999998865432 2235688999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
++ ++|.+++..... ..+++..+..++.|++.||.||| +++++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~ 152 (283)
T cd07835 80 LD-LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP 152 (283)
T ss_pred cC-cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence 95 689998865421 36899999999999999999999 899999999999999999999999999998765332
Q ss_pred CccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC--C-
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG--Y- 294 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 294 (350)
.. ......+++.|+|||++.+. .++.++|+||||+++|+|++|.+||...... ........... .
T Consensus 153 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~ 221 (283)
T cd07835 153 VR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI---------DQLFRIFRTLGTPDE 221 (283)
T ss_pred cc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHhCCCCh
Confidence 21 11222468899999988764 5789999999999999999999998643221 00111111000 0
Q ss_pred ------------CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 ------------MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...-+..............+..+.+++.+||+.+|++|||+.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 222 DVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000000000123467889999999999999999999985
No 329
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.2e-38 Score=287.33 Aligned_cols=265 Identities=16% Similarity=0.155 Sum_probs=195.5
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 133 (350)
.++|...+.| |.|+||.||+|.+ .++..||+|.+..... .....+.+|+.++.+++|+||+++++++.+. +..+
T Consensus 6 ~~~y~~~~~i-g~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRI-GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeee-eecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4678888888 9999999999999 5677999999864422 1123466899999999999999999998755 4689
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||++ ++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||.+.
T Consensus 85 lv~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~ 156 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156 (309)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceee
Confidence 9999996 58888876432 46899999999999999999999 9999999999999999999999999999988
Q ss_pred cCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
....... ......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||..... ..............
T Consensus 157 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~------~~~~~~~~~~~~~~ 228 (309)
T cd07845 157 TYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE------IEQLDLIIQLLGTP 228 (309)
T ss_pred ecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCC
Confidence 7654321 1122235788999999865 4588999999999999999999999874332 11111111100000
Q ss_pred CCCc---c------Cc-cccCCC-Cccc--hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GYMN---I------DP-VIVGDR-SCFR--KEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~~~---~------~~-~~~~~~-~~~~--~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... . .. ...... .... ....++.+.+++.+||+.||++|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 229 NESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0 00 000000 0000 0023567889999999999999999999986
No 330
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3e-38 Score=285.28 Aligned_cols=268 Identities=18% Similarity=0.156 Sum_probs=197.1
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCC---
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAE--- 130 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 130 (350)
...++|+..+.| |+|+||.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~l-g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQI-GEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeee-cccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 456788888998 9999999999999 5567899999865432 23356778999999999999999999987654
Q ss_pred -------cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 131 -------MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 131 -------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||.||| +.+|+|+||+|+||++++++.
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGL----VHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCc
Confidence 78999999975 6767665431 46899999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT 282 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~ 282 (350)
+||+|||.+......... ......++..|+|||.+.+. .++.++|||||||++++|++|++||..... ....
T Consensus 155 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~------~~~~ 227 (302)
T cd07864 155 IKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE------LAQL 227 (302)
T ss_pred EEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh------HHHH
Confidence 999999998766443221 11222367889999988654 578999999999999999999999874322 1111
Q ss_pred HHHHHHHHhcCCC------------ccCccccCCCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 283 DRVEKFIRSNGYM------------NIDPVIVGDRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 283 ~~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..+.......... ..++........ ......+..+.+++.+||+.+|++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 228 ELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111110000 000000000000 000123567999999999999999999999875
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.7e-38 Score=286.38 Aligned_cols=253 Identities=18% Similarity=0.181 Sum_probs=188.5
Q ss_pred CceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhh
Q 018816 73 EGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY 149 (350)
Q Consensus 73 ~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 149 (350)
++|.||.++. .++..||+|++... .....+.+.+|+.++++++||||+++++++.+.+..+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 3444555554 35669999998654 33455779999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc-----ccc
Q 018816 150 GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH-----IKA 224 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~~~ 224 (350)
.... ..+++.....++.|++.||.||| +.+|+|+||||+||+++.++.+|++|||.+......... ...
T Consensus 92 ~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 92 THFP---EGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred Hhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 5322 35788999999999999999999 999999999999999999999999999988655322111 112
Q ss_pred cccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC-------
Q 018816 225 STAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM------- 295 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 295 (350)
....++..|+|||++... .++.++|+|||||++|||++|..||...... .... .........
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-----~~~~----~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-----QMLL----EKVRGTVPCLLDKSTY 236 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH----HHHhccCccccccCch
Confidence 233467889999998763 5889999999999999999999999754321 0000 001000000
Q ss_pred -------------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 -------------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 -------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..++................++.+|+.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 011111111111112345678999999999999999999999987
No 332
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.9e-39 Score=292.72 Aligned_cols=266 Identities=17% Similarity=0.216 Sum_probs=197.4
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeec----CCc
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLE----AEM 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~ 131 (350)
.++|+..+.| |+|++|.||+|.. .++..||+|++.... ......+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~l-g~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENI-GSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeee-ecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 3688888888 9999999999998 567799999986542 2335667889999999999999999998763 346
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+. ++|.+++... ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEeccccc
Confidence 899999995 6898888643 45899999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccc--cccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcc
Q 018816 212 SKSIPEGKTHI--KASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNF 279 (350)
Q Consensus 212 ~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~ 279 (350)
+.......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... +....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 87654322211 1123458889999998865 458999999999999999999999997543210 00000
Q ss_pred hHH-----HHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 280 FIT-----DRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 280 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ........... ...+ ...... ....+..+.+++.+||+.+|++|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLP--RKQP---VPWSKI-FPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HhhhhhchhhHHHHHhhcc--cCCC---CCHHHH-cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 00000110000 0000 000000 0134578999999999999999999999887
No 333
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=285.64 Aligned_cols=258 Identities=11% Similarity=0.047 Sum_probs=182.2
Q ss_pred cCcccccccccCCCceEEEEEEECCC----ceEEEEEecccchhh-----------HHHHHHHHHHHHhcCCCCccceee
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRDR----GPILVMKYRKSVRYA-----------SERCFNNIVFASQMNHKSILKLIG 124 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~~----~~vaik~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~~ 124 (350)
+.|...+.| |+|+||.||+|.+.++ ..+++|......... ......+...+..++|+||+++++
T Consensus 12 ~~y~i~~~L-G~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 12 KEWKIDKLI-GCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CceEEeeEE-ecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 578888888 9999999999998443 345555432221110 011223344556678999999999
Q ss_pred eeecCC----cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC
Q 018816 125 CCLEAE----MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200 (350)
Q Consensus 125 ~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~ 200 (350)
++.... ..++++|++. .++.+.+... ...++..+..++.|++.||.||| +.+|+||||||+|||++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDG 161 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcC
Confidence 766543 3367777763 4566655432 34578888999999999999999 999999999999999999
Q ss_pred CCceeEcccCCCccCCCCCcc-----ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC
Q 018816 201 EYAAKLFDFSLSKSIPEGKTH-----IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275 (350)
Q Consensus 201 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 275 (350)
++.++|+|||+|+........ .......||+.|+|||+..+..++.++|||||||++|||++|..||......
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~-- 239 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN-- 239 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc--
Confidence 999999999999766432211 1122345999999999999999999999999999999999999999754221
Q ss_pred CCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
..........++..-....... ...++.+.+++..||+.+|++||++.++++.|
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 240 --GNLIHAAKCDFIKRLHEGKIKI-----------KNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred --hHHHHHhHHHHHHHhhhhhhcc-----------CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0111111111111111000000 02346799999999999999999999999876
No 334
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.5e-38 Score=282.28 Aligned_cols=263 Identities=16% Similarity=0.153 Sum_probs=196.9
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
+|+..+.| |.|++|.||+|+. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKL-GEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeee-ccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 47777888 9999999999999 5677899999865432 2345677899999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++ +|.+++..... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 80 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 80 MDK-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred CCc-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 974 88888754321 135899999999999999999999 899999999999999999999999999998755332
Q ss_pred CccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH-----------
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE----------- 286 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 286 (350)
.. ......++..|++||++.+. .++.++|+|||||++|+|++|..||...... .......
T Consensus 154 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07836 154 VN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE------DQLLKIFRIMGTPTESTW 225 (284)
T ss_pred cc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHHHhCCCChhhH
Confidence 21 12233478899999988664 5789999999999999999999998754321 0000000
Q ss_pred HHHHhcCCCccCccccCCCC---ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 KFIRSNGYMNIDPVIVGDRS---CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+... ............ .......+..+.+++.+||+.||.+||++.++++
T Consensus 226 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 226 PGISQL--PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHhcC--chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 001100 000000000000 0000133567899999999999999999999875
No 335
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-38 Score=291.04 Aligned_cols=269 Identities=17% Similarity=0.216 Sum_probs=198.8
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecC-----C
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEA-----E 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 130 (350)
.+.|.....| |+|+||+||+|.. .++..||+|.+... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~l-g~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPI-GRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEe-ccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3568888888 9999999999998 56779999998653 223345677899999999999999999988654 3
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++|+||+. ++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCc
Confidence 5799999995 6888887543 56899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC---------C-Cc-
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG---------G-SN- 278 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---------~-~~- 278 (350)
++........ ......++..|+|||.+.. ..++.++|+|||||++|+|++|++||........ . ..
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 154 LARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred cccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 9876643321 1223347889999998865 4689999999999999999999999864321000 0 00
Q ss_pred ---chHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 018816 279 ---FFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK--LRQM 345 (350)
Q Consensus 279 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~--L~~~ 345 (350)
............... ...++..... ....+..+.+++.+||+.+|++|||+.++++. +..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 232 DLGFIRNEKARRYIRSLP-YTPRQSFARL-----FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhhhcCchhhhHHHHhcC-cccccCHHHH-----cccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000000000 0000000000 01345678999999999999999999999975 5544
No 336
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.2e-38 Score=278.19 Aligned_cols=241 Identities=19% Similarity=0.093 Sum_probs=186.6
Q ss_pred ccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHH-HhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFA-SQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
.| |+|++|.||+|.. .++..||+|.+..... .....+..|..++ ...+|+||+++++++.+++..++|+||+++
T Consensus 3 ~l-~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 3 PI-SKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred cC-CcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 45 9999999999999 5667999999865432 1223344555444 455899999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999998643 46889999999999999999999 89999999999999999999999999998875432
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
.....+++.|+|||.+.+..++.++||||||+++|+|++|..||..... . ............ ..+..
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~-~~~~~~~~~~~~-~~~~~ 216 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---------D-AVFDNILSRRIN-WPEEV 216 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---------H-HHHHHHHhcccC-CCCcc
Confidence 1233478899999999888899999999999999999999999864321 1 111111111110 01100
Q ss_pred cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 302 VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
...+++.+.+++.+||+.+|++||++.++.+.
T Consensus 217 --------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 217 --------KEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred --------cccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 01345679999999999999999977554443
No 337
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.4e-38 Score=286.91 Aligned_cols=246 Identities=21% Similarity=0.244 Sum_probs=193.2
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEeccc---chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS---VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|+..+.| |+|++|.||+|+. .++..|++|.+... ......++.+|+.+++.++|+|++++++++......++|||
T Consensus 17 ~~~~~~l-g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 17 FSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHhe-eeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 5555667 9999999999998 56668999987542 22334568899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+. +++.+.+.... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 96 YCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred ccC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 996 68877764332 45889999999999999999999 99999999999999999999999999999876533
Q ss_pred CCccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
. ....+++.|+|||++. ...++.++|||||||++|+|++|..||..... ..... .......
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~-~~~~~~~ 231 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALY-HIAQNES 231 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH---------HHHHH-HHhhcCC
Confidence 2 2334788999999874 34678899999999999999999999764321 00111 1111111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
+... ....+..+.+|+.+||+.+|++||++.+++....
T Consensus 232 ----~~~~-------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 ----PALQ-------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ----CCcC-------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 1000 0144567899999999999999999999987543
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.1e-38 Score=280.81 Aligned_cols=263 Identities=17% Similarity=0.177 Sum_probs=195.2
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecC--CcCeEEe
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEA--EMPALVY 136 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 136 (350)
|.....| |+|++|.||+|.. .++..+|+|.+.... ......+.+|+.++++++|||++++++++.+. +..++|+
T Consensus 1 y~~~~~l-~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQI-GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEe-ccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 4455677 9999999999999 456799999987653 23345688999999999999999999999988 7999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++ ++|.+++.... ..+++..+..++.||+.||.||| +.+++|+||+|+||++++++.++|+|||.+....
T Consensus 80 e~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~ 151 (287)
T cd07840 80 EYMD-HDLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYT 151 (287)
T ss_pred cccc-ccHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence 9997 48888875532 46899999999999999999999 8999999999999999999999999999987665
Q ss_pred CCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC--
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG-- 293 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (350)
..... ......++..|+|||.+.+ ..++.++||||||+++|+|++|..||...... ..............
T Consensus 152 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~------~~~~~~~~~~~~~~~~ 224 (287)
T cd07840 152 KRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL------EQLEKIFELCGSPTDE 224 (287)
T ss_pred CCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCchh
Confidence 43321 1122346788999998765 45889999999999999999999998743321 00111111000000
Q ss_pred -CCccCc-----cccCCCC------ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 -YMNIDP-----VIVGDRS------CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 -~~~~~~-----~~~~~~~------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...... ....... ......++..+.+++.+||+.+|++||++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 225 NWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000 0000000 0000012578899999999999999999999986
No 339
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-37 Score=282.67 Aligned_cols=243 Identities=20% Similarity=0.247 Sum_probs=191.2
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
|.....| |+|+||.||+|+. .++..|++|.+.... ......+.+|+.+++.++|||++++++++.+.+..++|||
T Consensus 23 ~~~~~~l-g~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEI-GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceee-ccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 4444567 9999999999998 566789999886432 2334568899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+. +++.+++.... .++++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 102 ~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 102 YCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP 173 (313)
T ss_pred cCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC
Confidence 996 57777775432 46889999999999999999999 99999999999999999999999999998864322
Q ss_pred CCccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
.....|+..|+|||++. ...++.++|+|||||++|+|++|..||..... .............
T Consensus 174 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~---------~~~~~~~~~~~~~ 238 (313)
T cd06633 174 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYHIAQNDSP 238 (313)
T ss_pred ------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHhcCCC
Confidence 22345889999999984 35688999999999999999999999864322 1111111111111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... ...+..+.+|+.+||+.+|++||++.+++.
T Consensus 239 ~~~~------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 239 TLQS------------NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCCc------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100 123456889999999999999999999986
No 340
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.4e-37 Score=284.43 Aligned_cols=263 Identities=16% Similarity=0.136 Sum_probs=192.7
Q ss_pred cCC--CceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 70 DEI--EGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 70 g~G--~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
|+| +||+||++.+ .++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+++++|
T Consensus 7 g~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l 86 (328)
T cd08226 7 GRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSA 86 (328)
T ss_pred CCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCH
Confidence 666 8899999999 577799999986432 23346788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc---
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH--- 221 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--- 221 (350)
.+++..... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++++||+.+.........
T Consensus 87 ~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 87 NSLLKTYFP---EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred HHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 998865321 35889999999999999999999 999999999999999999999999999754322111100
Q ss_pred --ccccccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC---
Q 018816 222 --IKASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY--- 294 (350)
Q Consensus 222 --~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (350)
.......++..|+|||++.+. .++.++|||||||++|+|++|..||...... ............
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~ 231 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT---------QMLLQKLKGPPYSPL 231 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH---------HHHHHHhcCCCCCCc
Confidence 001112256679999999764 4789999999999999999999998753210 000000000000
Q ss_pred -------------------------CccCc----ccc-CCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HH
Q 018816 295 -------------------------MNIDP----VIV-GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK--KL 342 (350)
Q Consensus 295 -------------------------~~~~~----~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~--~L 342 (350)
..... ... ..........++..+.+|+.+||+.||++|||+.++++ .+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 00000 000 00001111256778999999999999999999999985 45
Q ss_pred HHhhh
Q 018816 343 RQMYR 347 (350)
Q Consensus 343 ~~~~~ 347 (350)
..+++
T Consensus 312 ~~~~~ 316 (328)
T cd08226 312 KQVKE 316 (328)
T ss_pred HHHHH
Confidence 55544
No 341
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=282.79 Aligned_cols=266 Identities=19% Similarity=0.228 Sum_probs=206.5
Q ss_pred ccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHH--hcCCCCccceeeeeecCC----cCeEEeec
Q 018816 65 RNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFAS--QMNHKSILKLIGCCLEAE----MPALVYEP 138 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~~~~~~~~~~----~~~lv~e~ 138 (350)
..++ |+|.||.||+|.+.+. .||||++... ....|.+|-.|.+ .++|+||+++++.-.... .++||+||
T Consensus 215 ~eli-~~Grfg~V~KaqL~~~-~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 215 LELI-GRGRFGCVWKAQLDNR-LVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred HHHh-hcCccceeehhhccCc-eeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 3455 9999999999999886 9999999764 3456777776665 458999999999866544 89999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcc------CCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFG------FPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
.+.|+|.++|.. ..++|....+++..+++||+|||+. +..+|+|||||..|||+.+++++-|+|||+|
T Consensus 290 h~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 290 HPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred ccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999976 5799999999999999999999963 4568999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCC-CC-----ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCc-------c
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-YN-----EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSN-------F 279 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~-------~ 279 (350)
..+..+.........+||.+|||||++.+.. +. .+.||||+|.++|||++.-.-.+...+.+.+.+ .
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 8887655544444567999999999997642 32 468999999999999996554432211111111 1
Q ss_pred hHHHHHHHHHHh-cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 280 FITDRVEKFIRS-NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
...+.++..+-. ..++.+...+..+ .-...+.+.+..||..||+.|.|+.=|-+++.++...
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h-------~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKH-------AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcC-------ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 122334444433 3355555555544 4456789999999999999999999999998887543
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.2e-37 Score=276.65 Aligned_cols=249 Identities=17% Similarity=0.121 Sum_probs=187.7
Q ss_pred HHHHHhcCccccccc-ccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeecCC
Q 018816 54 DLKTAINNYSMRNIT-IDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLEAE 130 (350)
Q Consensus 54 ~l~~~~~~f~~~~~l-ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 130 (350)
++....++|...+.+ +|+|+||.||++.. .++..+|+|.+....... .|+.....+ +||||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 334444555544432 39999999999998 556677888775432111 122222222 6999999999999999
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEccc
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLFDF 209 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Df 209 (350)
..++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++ .++|+||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999998653 37899999999999999999999 99999999999999999998 9999999
Q ss_pred CCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
|.+...... ....++..|+|||++.+..++.++|+||||+++|+|++|..||...... ......+. ...
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~----~~~~~~~~-~~~ 223 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE----ELDLESLL-KRQ 223 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc----hhhHHHHH-Hhh
Confidence 998765432 1234889999999999888999999999999999999999998743211 11111111 110
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT-MIDVAK 340 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-~~evl~ 340 (350)
.... +.. ...+..+.+++.+||+.+|.+||+ ++++++
T Consensus 224 ---~~~~--~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 ---QKKL--PFI---------KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ---cccC--Ccc---------cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0000 000 134567899999999999999996 588874
No 343
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.8e-38 Score=280.51 Aligned_cols=249 Identities=18% Similarity=0.196 Sum_probs=200.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 134 (350)
++|.....| |+|++|.||+|.. .++..|++|.+.... ......+.+|+.++.+++ ||||+++++++.+++..++
T Consensus 1 ~~y~~~~~l-g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKII-GEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeee-cCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 367778888 9999999999999 567799999886532 233466889999999998 9999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 80 v~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~ 151 (280)
T cd05581 80 VLEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKV 151 (280)
T ss_pred EEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccc
Confidence 99999999999998654 47999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCcc------------------ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC
Q 018816 215 IPEGKTH------------------IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG 276 (350)
Q Consensus 215 ~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 276 (350)
....... .......++..|+|||++....++.++|+||||++++++++|..||.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---- 227 (280)
T cd05581 152 LDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---- 227 (280)
T ss_pred cCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH----
Confidence 6443221 112234478899999999888899999999999999999999999874321
Q ss_pred CcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 018816 277 SNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM----IDVAK 340 (350)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~----~evl~ 340 (350)
........ ..... +. ...++.+.+++.+||+.+|++|||+ .+++.
T Consensus 228 -----~~~~~~~~-~~~~~-~~------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 -----YLTFQKIL-KLEYS-FP------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -----HHHHHHHH-hcCCC-CC------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 01111111 11110 00 1335678999999999999999999 76654
No 344
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.4e-38 Score=280.24 Aligned_cols=262 Identities=16% Similarity=0.116 Sum_probs=197.0
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
|...+.| |+|++|.||++.. .++..+++|.+..... .....+.+|+.++++++|+||+++++++.+++..++|+||
T Consensus 1 y~~~~~i-~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKI-GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred Cccceee-ecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 3445667 9999999999999 5677899998865432 2456788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+++ +|.+++.... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~-~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 80 MDT-DLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred cCC-CHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 975 8888776532 47899999999999999999999 999999999999999999999999999998766543
Q ss_pred CccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC----
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG---- 293 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 293 (350)
.. ......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... .........+....
T Consensus 152 ~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 223 (283)
T cd05118 152 VR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI------DQLFKIFRTLGTPDPEVW 223 (283)
T ss_pred cc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHcCCCchHhc
Confidence 31 11223478889999998876 7899999999999999999999998654321 00000000000000
Q ss_pred CCccC------ccccCCCC---ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 YMNID------PVIVGDRS---CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ~~~~~------~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+ ........ .......+..+.+++.+||+.||.+||++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 224 PKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred ccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000 00000000 0001245678999999999999999999999985
No 345
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.6e-38 Score=281.70 Aligned_cols=251 Identities=19% Similarity=0.264 Sum_probs=192.5
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCceEEEEEecccch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVR-YASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|...+.| |+|++|.||+|.++ ++..||+|.+..... .....+..|+.++.+.. ||||+++++++.+....+++|
T Consensus 15 ~~~~~~~~l-g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEI-GSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred chheeeeEe-eccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 567778888 99999999999995 477999999865432 33455677887777774 999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||++ +++.+++.... ..+++..+..++.+++.||.||| + .+|+|+||+|+||++++++.+||+|||++...
T Consensus 94 e~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 9985 56776664422 46889999999999999999999 6 58999999999999999999999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGY----YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
...... ....++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||..... ...........
T Consensus 166 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~ 234 (296)
T cd06618 166 VDSKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--------EFEVLTKILQE 234 (296)
T ss_pred cCCCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--------HHHHHHHHhcC
Confidence 432221 2224788999999987553 78999999999999999999999864211 01111111111
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. ..... . ...+.++.+|+.+||+.||++|||+.+++..
T Consensus 235 ~~-~~~~~----~------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 235 EP-PSLPP----N------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CC-CCCCC----C------CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 11100 0 0234678999999999999999999999864
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.3e-37 Score=278.00 Aligned_cols=240 Identities=16% Similarity=0.159 Sum_probs=186.1
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHH---HHHhcCCCCccceeeeeecCCcCeEEeecCCC
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIV---FASQMNHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
||+|+||.||++.. .++..||+|.+..... .....+..|.. .+....||||+.+++++.+.+..++||||+++
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 39999999999998 5567999999865421 11222334433 44455799999999999999999999999999
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 82 GDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 9999988543 46899999999999999999999 8999999999999999999999999999987553322
Q ss_pred ccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 222 IKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
.....|+..|+|||++.++ .++.++||||+|+++|+|++|..||....... .......... ..+.
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-----~~~~ 217 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-------KHEIDRMTLT-----MAVE 217 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-------hHHHHHHhhc-----cCCC
Confidence 2234589999999998755 58999999999999999999999997542210 0001111100 0111
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
+. ...+..+.+++.+||..+|++|| ++.++++
T Consensus 218 ~~--------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 LP--------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CC--------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11 12346799999999999999999 9999985
No 347
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=297.44 Aligned_cols=272 Identities=19% Similarity=0.178 Sum_probs=208.1
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecC------CcCe
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEA------EMPA 133 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 133 (350)
+...+.| |+|+||.||+|+. ..|..||||.++... ....+...+|+++|++++|||||+++++-.+. ....
T Consensus 15 W~~~e~L-G~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERL-GKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhh-cCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3445677 9999999999997 788899999998753 35577889999999999999999999986543 3678
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeC--C--CCceeEccc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--E--EYAAKLFDF 209 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~--~--~~~~kl~Df 209 (350)
+|||||.+|||...+...... ..+++.+.+.++.+++.||.||| .++|+||||||.||++- . .-.-||+||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~--~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENA--YGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEEeecCCCcHHHHhcCcccc--cCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence 999999999999999775432 46999999999999999999999 99999999999999993 2 234699999
Q ss_pred CCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
|.|+....+. .....+||..|++||.+.. ..|+..+|.|||||++|+.+||..||-..... ......++..
T Consensus 169 G~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p-----k~~~~~~~~~ 240 (732)
T KOG4250|consen 169 GAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP-----KNNKEIMWHI 240 (732)
T ss_pred cccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc-----cccchhhhhh
Confidence 9999887655 3556679999999999985 78999999999999999999999999754321 1112222333
Q ss_pred HHhcCCC---ccCcccc------CCC--CccchHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHhhh
Q 018816 289 IRSNGYM---NIDPVIV------GDR--SCFRKEEKLQAYVELAFKCLSHSAEDRP--TMIDVAKKLRQMYR 347 (350)
Q Consensus 289 ~~~~~~~---~~~~~~~------~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~RP--t~~evl~~L~~~~~ 347 (350)
..+.... ..++..+ ... ++.........+..++..+|..+|.+|- ...+....+..|.+
T Consensus 241 ~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 241 ITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 3222211 1111111 111 1111124556788899999999999998 77777777776654
No 348
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.6e-38 Score=282.06 Aligned_cols=262 Identities=19% Similarity=0.170 Sum_probs=193.8
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++|.....| |+|++|.||+|.+ .++..||+|.+..... ...+.+.+|+.++++++||||+++++++.+....++||
T Consensus 2 ~~y~~~~~l-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKI-GEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEe-cCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 468888888 9999999999999 4667899998854322 22356889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 215 (350)
||++ ++|.+++..... ..+++..+..++.||+.||.||| +++++|+||+|+||+++. ++.+||+|||++...
T Consensus 81 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred eccc-ccHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 9996 578777754321 34678888999999999999999 999999999999999985 567899999998765
Q ss_pred CCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC-
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG- 293 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (350)
..... ......+++.|+|||++.+. .++.++|||||||++|+|++|.+||...... +..........
T Consensus 154 ~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~---------~~~~~~~~~~~~ 222 (294)
T PLN00009 154 GIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI---------DELFKIFRILGT 222 (294)
T ss_pred CCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHhCC
Confidence 43221 11223478899999988764 5789999999999999999999998753221 11111111000
Q ss_pred --CCc------------cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 --YMN------------IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 --~~~------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ..+..............+..+.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 223 PNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00000000000000123467889999999999999999999986
No 349
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.6e-38 Score=286.62 Aligned_cols=264 Identities=16% Similarity=0.156 Sum_probs=194.1
Q ss_pred cCccc-ccccccCCCceEEEEEEE-CCCceEEEEEecccchhh--------------HHHHHHHHHHHHhcCCCCcccee
Q 018816 60 NNYSM-RNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYA--------------SERCFNNIVFASQMNHKSILKLI 123 (350)
Q Consensus 60 ~~f~~-~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 123 (350)
+.|.. .+.| |+|+||.||+|.+ .++..||+|.+....... ...+.+|+.++++++||||++++
T Consensus 8 ~ry~~~~~~i-g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 8 ERYIQKGAHL-GEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred cchhhhhhcc-cCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 44543 3456 9999999999998 567799999986542211 12477899999999999999999
Q ss_pred eeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc
Q 018816 124 GCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA 203 (350)
Q Consensus 124 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~ 203 (350)
+++...+..++||||++ ++|.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGI 157 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCC
Confidence 99999999999999996 6899888543 46889999999999999999999 999999999999999999999
Q ss_pred eeEcccCCCccCCCCCc------------cccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 018816 204 AKLFDFSLSKSIPEGKT------------HIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLS 270 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~ 270 (350)
++|+|||.+........ ........+++.|+|||.+.+. .++.++|+|||||++|+|++|.+||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999876541110 0111223367889999998764 4789999999999999999999998754
Q ss_pred cccCCCCcchHHHHHHHHHHhcCCC------------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 018816 271 RLATGGSNFFITDRVEKFIRSNGYM------------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDV 338 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev 338 (350)
.. ................. ...+......... ....+..+.+++.+||+.+|++|||+.++
T Consensus 238 ~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 310 (335)
T PTZ00024 238 NE------IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTI-FPNASDDAIDLLQSLLKLNPLERISAKEA 310 (335)
T ss_pred CH------HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHh-CcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence 32 11111111111111000 0000000000000 01235678899999999999999999999
Q ss_pred HH
Q 018816 339 AK 340 (350)
Q Consensus 339 l~ 340 (350)
+.
T Consensus 311 l~ 312 (335)
T PTZ00024 311 LK 312 (335)
T ss_pred hc
Confidence 86
No 350
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-38 Score=310.38 Aligned_cols=256 Identities=18% Similarity=0.217 Sum_probs=192.3
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhcCCCCccceeeeeecC----
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQMNHKSILKLIGCCLEA---- 129 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 129 (350)
.+...+|.+..+| |+||||.||+++. -||..+|||++.-.. ......+.+|+++|++|+|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lL-GkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 475 SRYLNDFEELELL-GKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhHhhhhHHHHHh-cCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 4667889999999 9999999999999 678899999986553 34456688999999999999999999876531
Q ss_pred --------------------------------------------------------------------------------
Q 018816 130 -------------------------------------------------------------------------------- 129 (350)
Q Consensus 130 -------------------------------------------------------------------------------- 129 (350)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018816 130 -----------------------------------EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANA 174 (350)
Q Consensus 130 -----------------------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~ 174 (350)
..+||-||||+..++.+++..+... -.....++++++|+.|
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEG 709 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHH
Confidence 0137889999988888888664211 1366789999999999
Q ss_pred HHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC----------------CCCccccccccccCCCCCCccc
Q 018816 175 VAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP----------------EGKTHIKASTAIGSLEFAAPEY 238 (350)
Q Consensus 175 l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----------------~~~~~~~~~~~~gt~~y~aPE~ 238 (350)
|.|+| ++|||||||||.||++++++.|||+|||+|+... .+......+..+||..|+|||+
T Consensus 710 LaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 99999 9999999999999999999999999999998721 0011112345679999999999
Q ss_pred cccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHH
Q 018816 239 LTTG---YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQ 315 (350)
Q Consensus 239 ~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (350)
+.+. .|+.|+|+||||+++|||+. ||...- .-+.. ...++++.-+. ++.+. .+..+
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--------ERa~i-L~~LR~g~iP~-~~~f~--------~~~~~ 845 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--------ERASI-LTNLRKGSIPE-PADFF--------DPEHP 845 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCchH--------HHHHH-HHhcccCCCCC-Ccccc--------cccch
Confidence 9865 49999999999999999997 344321 11111 11111111110 11110 13334
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 018816 316 AYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 316 ~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.-.+++.+|++.||++||||.|+|.
T Consensus 846 ~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 846 EEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHHHHhcCCCccCCCHHHHhh
Confidence 5678999999999999999999986
No 351
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5.2e-38 Score=288.86 Aligned_cols=260 Identities=18% Similarity=0.253 Sum_probs=193.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC------
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE------ 130 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 130 (350)
++|.....| |+|+||.||+|+. .++..||+|++.... ......+.+|+.++++++||||+++++++....
T Consensus 15 ~~y~~~~~i-g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQV-GSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEe-eecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 788888888 9999999999998 567799999986532 222356789999999999999999999987543
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++|+||+. .+|..+.. ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred eEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCC
Confidence 4589999996 46766542 35889999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|+.||...... ..+....
T Consensus 163 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---------~~~~~~~ 228 (342)
T cd07879 163 LARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---------DQLTQIL 228 (342)
T ss_pred CCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHH
Confidence 98764322 122347888999999876 46889999999999999999999999753211 0111111
Q ss_pred HhcC---------------CCcc--Cccc-cCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 018816 290 RSNG---------------YMNI--DPVI-VGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK--LRQMY 346 (350)
Q Consensus 290 ~~~~---------------~~~~--~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~--L~~~~ 346 (350)
...+ .... .+.. ........ ...+..+.+|+.+||+.||++||++.+++.. ++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF-PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHh-cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 1000 0000 0000 00000000 0234568899999999999999999999953 55543
No 352
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1e-37 Score=280.01 Aligned_cols=256 Identities=17% Similarity=0.144 Sum_probs=198.2
Q ss_pred CcccccccccCCCceEEEEEEE----CCCceEEEEEecccch----hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCc
Q 018816 61 NYSMRNITIDEIEGYILYMGFL----RDRGPILVMKYRKSVR----YASERCFNNIVFASQM-NHKSILKLIGCCLEAEM 131 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~----~~~~~vaik~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 131 (350)
+|...+.| |+|++|.||+++. .++..||+|.+..... ...+.+.+|+.++.++ +||||+.+++.+..+..
T Consensus 1 ~~~~~~~i-g~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~ 79 (288)
T cd05583 1 NFELLRVL-GTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK 79 (288)
T ss_pred CceEEEEe-ccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence 36667778 9999999999986 3456899999865321 2345678999999999 59999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~ 151 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGL 151 (288)
T ss_pred EEEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcc
Confidence 99999999999999988643 46889999999999999999999 89999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY--YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
+......... ......++..|+|||.+.+.. .+.++|+||||+++|+|++|..||...... ....... ...
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~-~~~ 224 (288)
T cd05583 152 SKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-----NSQSEIS-RRI 224 (288)
T ss_pred cccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-----chHHHHH-HHH
Confidence 8765433221 122334789999999987665 788999999999999999999998642210 1111111 111
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQM 345 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~ 345 (350)
.... +.. +...+..+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 225 ~~~~-----~~~--------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 225 LKSK-----PPF--------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HccC-----CCC--------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1110 000 013345788999999999999999988887766543
No 353
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.9e-37 Score=276.54 Aligned_cols=258 Identities=19% Similarity=0.221 Sum_probs=193.2
Q ss_pred cccccccccCCCceEEEEEEEC-CCceEEEEEecccch--hhHHHHHHHHHHHHhc---CCCCccceeeeeecCCc----
Q 018816 62 YSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVR--YASERCFNNIVFASQM---NHKSILKLIGCCLEAEM---- 131 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~---- 131 (350)
|+....| |+|+||.||+|... ++..||+|.+..... .....+.+|+.++.++ +||||+++++++.+.+.
T Consensus 1 y~~~~~l-~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEI-GEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEe-cccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 4556777 99999999999994 477999999864322 2234566788877766 59999999999988776
Q ss_pred -CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 132 -PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 132 -~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
.+++|||++ ++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccC
Confidence 999999997 588888865322 35899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
.+........ .....++..|+|||++.+..++.++|+|||||++|+|++|.+||...... ........
T Consensus 153 ~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~---------~~~~~~~~ 220 (287)
T cd07838 153 LARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA---------DQLDKIFD 220 (287)
T ss_pred cceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH---------HHHHHHHH
Confidence 9877643321 12223788899999999889999999999999999999999988743321 11111111
Q ss_pred hcCC------C--------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNGY------M--------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~~------~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.... . ........... ......+..+.+++.+||+.||++||++.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFK-SFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchh-hhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1000 0 00000000000 000144577899999999999999999999875
No 354
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-37 Score=278.58 Aligned_cols=251 Identities=17% Similarity=0.139 Sum_probs=194.8
Q ss_pred CcccccccccCCCceEEEEEEE----CCCceEEEEEecccch----hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCc
Q 018816 61 NYSMRNITIDEIEGYILYMGFL----RDRGPILVMKYRKSVR----YASERCFNNIVFASQM-NHKSILKLIGCCLEAEM 131 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~----~~~~~vaik~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 131 (350)
+|+..+.| |+|+||.||++.. .++..||+|.+..... ...+.+.+|+.++.++ +|+||+.+++++..+..
T Consensus 1 ~y~~~~~l-g~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (290)
T cd05613 1 NFELLKVL-GTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK 79 (290)
T ss_pred Cceeeeee-ccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence 46667788 9999999999987 3567899999865322 2345678899999999 59999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSL 211 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 211 (350)
.++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+|||++.++.++|+|||+
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 151 (290)
T cd05613 80 LHLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 151 (290)
T ss_pred EEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCcc
Confidence 99999999999999998653 46888999999999999999999 99999999999999999999999999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
+......... ......|+..|+|||.+... .++.++||||||+++|+|++|..||...... ....... ...
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~-~~~ 224 (290)
T cd05613 152 SKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-----NSQAEIS-RRI 224 (290)
T ss_pred ceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-----ccHHHHH-HHh
Confidence 8765432211 12234488999999998753 4788999999999999999999998643211 1111111 111
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP-----TMIDVAK 340 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~evl~ 340 (350)
...... .. ...+..+.+++.+||+.+|++|| ++.+++.
T Consensus 225 ~~~~~~-~~------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 225 LKSEPP-YP------------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred hccCCC-CC------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 111100 00 13446788999999999999997 6777765
No 355
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.6e-37 Score=277.79 Aligned_cols=267 Identities=16% Similarity=0.159 Sum_probs=193.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
|...+.| |+|++|.||+|+. .++..|++|++..... .......+|+..+.+++ ||||+++++++.+++..++||||
T Consensus 1 y~~~~~i-g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQL-GDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred Ceeheee-ccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 4456677 9999999999999 4566899999865432 22334567999999999 99999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
+ +++|.+++..... ..+++..+..++.|++.+|.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 80 M-EGNLYQLMKDRKG---KPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred C-CCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9 7899988865421 46899999999999999999999 999999999999999999999999999998765433
Q ss_pred CccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCC-------CcchHHHHHHHHHH
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGG-------SNFFITDRVEKFIR 290 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~ 290 (350)
.. .....++..|+|||++.. ..++.++|+||||+++++|++|.+||......... .......+......
T Consensus 153 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 153 PP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred CC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 22 123347889999998854 45789999999999999999999998654321000 00000000000000
Q ss_pred hcC-CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 291 SNG-YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ...+............+ ..+..+.+++.+||+.+|++|||+.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 00000000000000000 12467999999999999999999999875
No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8.7e-38 Score=285.94 Aligned_cols=266 Identities=18% Similarity=0.212 Sum_probs=202.0
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----cC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE-----MP 132 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 132 (350)
+|.....| |.|++|.||+|+. ..+..|++|++.... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 1 ~y~i~~~i-g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPI-GSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred Cceeeeee-cCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 36667777 9999999999999 457799999987643 344567889999999999999999999988765 78
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
+++|||++ ++|.+++... ..+++..+..++.+++.||.||| +.+++|+||||+||+++.++.++|+|||.+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 99999997 5888888653 47899999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCcc-ccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHH
Q 018816 213 KSIPEGKTH-IKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIR 290 (350)
Q Consensus 213 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 290 (350)
......... .......++..|+|||++.+. .++.++|+||||+++|+|++|.+||...... ........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~---------~~~~~i~~ 221 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI---------DQLNLIVE 221 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH---------HHHHHHHH
Confidence 876543211 112233478899999999887 7899999999999999999999998754321 00000000
Q ss_pred hcCC---------------Ccc---CccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHhh
Q 018816 291 SNGY---------------MNI---DPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK--KLRQMY 346 (350)
Q Consensus 291 ~~~~---------------~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~--~L~~~~ 346 (350)
..+. ..+ ........... ....+..+.+++.+||+.+|++|||+.+++. .|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 222 VLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKL-FPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hcCCCChhHhhhccccchhhHHhhcccCCcchhHHh-cccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0000 000 00000000000 0124567899999999999999999999998 355544
No 357
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-37 Score=282.21 Aligned_cols=267 Identities=16% Similarity=0.123 Sum_probs=193.4
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh--hHHHHHHHHHHHHhcCCCCccceeeeeecCC-----
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY--ASERCFNNIVFASQMNHKSILKLIGCCLEAE----- 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 130 (350)
.++|...+.| |+|++|.||+|.. .++..||+|++...... ....+.+|+.++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~l-g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKL-GEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEe-ccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 5789999998 9999999999998 56679999988654321 2345678999999999999999999876543
Q ss_pred ---cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 131 ---MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 131 ---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
..++|+||++ ++|...+.... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENPS----VKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEC
Confidence 4699999996 46777665432 46899999999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccc---------cccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 018816 208 DFSLSKSIPEGKTHI---------KASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 277 (350)
|||++.......... ......+++.|+|||.+.+. .++.++|||||||++|+|++|.+||......
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~---- 233 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI---- 233 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 999987654322111 11223467889999987654 5889999999999999999999998754321
Q ss_pred cchHHHHHHHHHHhcC----------CCccCccccCCCCccch---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 278 NFFITDRVEKFIRSNG----------YMNIDPVIVGDRSCFRK---EEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.............. ....+............ ......+.+++.+||+.||++|||+.+++.
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 --DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred --HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00011110000000 00000000000000000 123357889999999999999999999875
No 358
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-37 Score=286.89 Aligned_cols=270 Identities=17% Similarity=0.195 Sum_probs=199.9
Q ss_pred ccccHHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceee
Q 018816 48 RSFSSEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIG 124 (350)
Q Consensus 48 ~~~~~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~ 124 (350)
+.....++...+++|.....| |+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++.+++||||+++++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~l-g~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred hhhHHHHHhhccCceEEEEEe-eecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 334556677788999999998 9999999999998 667799999986532 223456788999999999999999999
Q ss_pred eeecC------CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 125 CCLEA------EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 125 ~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
++... ...+++++++ +++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||++
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll 153 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAV 153 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEE
Confidence 87643 3467888887 7899887753 35889999999999999999999 9999999999999999
Q ss_pred CCCCceeEcccCCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 018816 199 QEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 277 (350)
+.++.++|+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......
T Consensus 154 ~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~---- 224 (345)
T cd07877 154 NEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---- 224 (345)
T ss_pred cCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 99999999999998764322 123347889999998866 46889999999999999999999998643221
Q ss_pred cchHHHHHHHHHHhcCCC---------------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 278 NFFITDRVEKFIRSNGYM---------------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
................ .+.......... .....++.+.+++.+||+.||.+|||+.+++.
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 225 --DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred --HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000000000000000 000000000000 00012457889999999999999999999886
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9e-38 Score=285.56 Aligned_cols=265 Identities=16% Similarity=0.175 Sum_probs=197.7
Q ss_pred HHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeec-C
Q 018816 54 DLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLE-A 129 (350)
Q Consensus 54 ~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~ 129 (350)
++...+++|+....| |.|+||.||++.. .++..||+|++... .....+.+.+|+.++.+++||||+++.+++.. .
T Consensus 4 ~~~~~~~~y~~~~~i-g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 4 TVFEITNRYVDLQPV-GMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ceeccccceEEEEee-cccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 344577899999998 9999999999998 57779999987543 22334668899999999999999999998865 5
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEccc
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDF 209 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df 209 (350)
...++++||+ +++|.+++.. .+++......++.|++.||.||| +.+++|+||+|+||+++.++.++|+||
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred CcEEEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcc
Confidence 5789999998 5689888753 35788888899999999999999 999999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 210 SLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
|.+...... .....++..|+|||++.+ ..++.++|+||||+++|+|++|.+||...... .........
T Consensus 153 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~------~~~~~~~~~ 221 (328)
T cd07856 153 GLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV------NQFSIITDL 221 (328)
T ss_pred ccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHH
Confidence 998754321 122347889999998866 46899999999999999999999998643220 000000000
Q ss_pred HH------------hcCCCccCccccCCCCccch---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 289 IR------------SNGYMNIDPVIVGDRSCFRK---EEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 289 ~~------------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
.. ......+. ........... ...+..+.+++.+||+.+|++|||+.+++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 222 LGTPPDDVINTICSENTLRFVQ-SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hCCCCHHHHHhccchhhHHHHh-hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000 00000000000 0234679999999999999999999999863
No 360
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-37 Score=286.30 Aligned_cols=268 Identities=15% Similarity=0.162 Sum_probs=195.7
Q ss_pred HHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC--
Q 018816 56 KTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAE-- 130 (350)
Q Consensus 56 ~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 130 (350)
....++|...+.| |+|+||.||++.. .++..||+|++.... ......+.+|+.++++++||||+++++++..+.
T Consensus 11 ~~~~~~y~~~~~l-g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 11 WEVPDRYRDLKQV-GSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hccccceEEEEEe-eecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3456789888888 9999999999998 567799999985432 233456889999999999999999999987654
Q ss_pred ----cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeE
Q 018816 131 ----MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 131 ----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl 206 (350)
..++||||+ +++|.+++.. ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEE
Confidence 348999999 6789888753 46889999999999999999999 999999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCc-----ch
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSN-----FF 280 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~-----~~ 280 (350)
+|||++....... ....+++.|+|||.+.+ ..++.++|+||||+++|++++|..||........... ..
T Consensus 160 ~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07880 160 LDFGLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGT 234 (343)
T ss_pred eecccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999987653321 22347889999999876 3588999999999999999999999875422100000 00
Q ss_pred HHHHHHHHHHhcC-CCcc--CccccC-CCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 281 ITDRVEKFIRSNG-YMNI--DPVIVG-DRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 281 ~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....+...+.... .... -+.... ..... ....+..+.+++.+||+.||++|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 235 PSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSL-LPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCHHHHHhhcchhHHHHHHhccccCcchHHHh-ccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 0000 000000 00000 0123456889999999999999999999984
No 361
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=319.27 Aligned_cols=255 Identities=16% Similarity=0.126 Sum_probs=201.2
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
..+-+......| |.|.||.||.|.. ++|...|+|-+.-. .......+.+|.+++..|+|||+|+++|+-.+.+..+
T Consensus 1232 nV~~rWqrg~~I-g~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFI-GGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred cceeeecccccc-CCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 334556667777 9999999999999 66656677776433 3334456789999999999999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
|.||||++|+|.+.+... ...++.....+..|++.|+.||| +.|||||||||+||+++.+|.+|++|||.|.
T Consensus 1311 IFMEyC~~GsLa~ll~~g-----ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHG-----RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHhccCcHHHHHHhc-----chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeeccccee
Confidence 999999999999998654 34667777788999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCcc--ccccccccCCCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 214 SIPEGKTH--IKASTAIGSLEFAAPEYLTTGY---YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 214 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
.+...... .......||+.|||||++.+.. ...+.|||||||++.||+||+.||..... +|...+
T Consensus 1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn----------e~aIMy 1452 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN----------EWAIMY 1452 (1509)
T ss_pred EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc----------hhHHHh
Confidence 77554211 1123456999999999998643 56789999999999999999999875432 121111
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
--..++. +. .|+..+.+-++++..||..||++|.++.++++.
T Consensus 1453 ~V~~gh~----------Pq-~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1453 HVAAGHK----------PQ-IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HHhccCC----------CC-CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1111111 11 122567788999999999999999999888763
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-37 Score=285.99 Aligned_cols=270 Identities=14% Similarity=0.142 Sum_probs=192.7
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecC---------
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEA--------- 129 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------- 129 (350)
++|...+.| |.|+||.||+|.. .++..||+|++........+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~y~~~~~L-g~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPL-GCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEe-cCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 678888888 9999999999999 56779999998665555567788999999999999999999876543
Q ss_pred -----CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCc
Q 018816 130 -----EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYA 203 (350)
Q Consensus 130 -----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~ 203 (350)
...++||||++ ++|.+++.. ..+++..+..++.||+.||.||| +.+++|+||||+||+++. ++.
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCce
Confidence 35789999997 588887753 35889999999999999999999 999999999999999974 567
Q ss_pred eeEcccCCCccCCCCCccc-cccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC------
Q 018816 204 AKLFDFSLSKSIPEGKTHI-KASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG------ 275 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~------ 275 (350)
++++|||.+.......... ......++..|+|||++.. ..++.++|||||||++|+|++|+.||........
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 8999999987653321111 1122347889999998754 4588999999999999999999999975432100
Q ss_pred CCcchHHHHHHHHHHhcCCCccCccccCCCCc-cchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSC-FRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
..+...........................+. ......+.++.+|+.+||+.||++|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000000000000000000000000000000 000023467889999999999999999999984
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.2e-37 Score=272.54 Aligned_cols=249 Identities=16% Similarity=0.181 Sum_probs=191.6
Q ss_pred cccccccccCCCceEEEEEEEC-CCceEEEEEeccc-----chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEE
Q 018816 62 YSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKS-----VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 135 (350)
|...+.| |+|+||.||++.+. .+..+++|.+... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 2 y~i~~~i-g~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 2 YILQQRL-GKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred ceeeeee-cCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5666777 99999999999983 3334555554321 112334567899999999999999999999999999999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|||+++++|.+++...... ...+++..++.++.|++.||.||| +.+++|+||+|+||+++. +.++|+|||.+...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeec
Confidence 9999999999988642111 156899999999999999999999 999999999999999975 56999999998765
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
..... ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ........ ....
T Consensus 156 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~---------~~~~~~~~-~~~~- 222 (260)
T cd08222 156 MGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF---------LSVVLRIV-EGPT- 222 (260)
T ss_pred CCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHH-cCCC-
Confidence 43322 12233478899999999888889999999999999999999999863221 11111111 1111
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.. +...+.++.+++.+||+.+|++||++.++++
T Consensus 223 ---~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 ---PSL--------PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCC--------cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 111 1245578899999999999999999999986
No 364
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-37 Score=299.87 Aligned_cols=265 Identities=22% Similarity=0.280 Sum_probs=210.6
Q ss_pred HHhcCcccccccccCCCceEEEEEEEC----C----CceEEEEEecccch-hhHHHHHHHHHHHHhc-CCCCccceeeee
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFLR----D----RGPILVMKYRKSVR-YASERCFNNIVFASQM-NHKSILKLIGCC 126 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~~----~----~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 126 (350)
...++......+ |+|.||.|++|... . ...||||.+..... ...+.+..|+++|..+ .|+||+.++|+|
T Consensus 293 ~~~~~l~~~~~l-g~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 293 IPRENLKLGKYL-GEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred echhhcccccee-ecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 334444555577 99999999999862 1 44899999876533 4567899999999999 599999999999
Q ss_pred ecCCcCeEEeecCCCCchhhhhhCCC---CCCC--------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCc
Q 018816 127 LEAEMPALVYEPAGYCTLADRLYGPL---QTHL--------EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWN 195 (350)
Q Consensus 127 ~~~~~~~lv~e~~~~~sL~~~l~~~~---~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 195 (350)
...+..++|+||+..|+|.+++.... .... ..++..+.+.++.|||.|++||+ +.+++||||..+|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhh
Confidence 99999999999999999999997754 1011 13889999999999999999999 9999999999999
Q ss_pred eEeCCCCceeEcccCCCccCCCCCcccccccc-ccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccc
Q 018816 196 ILFQEEYAAKLFDFSLSKSIPEGKTHIKASTA-IGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLA 273 (350)
Q Consensus 196 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~ 273 (350)
||+..+..+||+|||+|+.............. .-+..|||||.+....|+.+|||||||+++||++| |..||....
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-- 526 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-- 526 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--
Confidence 99999999999999999976655544322211 13556999999999999999999999999999999 778876421
Q ss_pred CCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 274 TGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
....+.+.++.+.... . +..+..++.+++..||+.+|++||++.++.+.|..++
T Consensus 527 -------~~~~l~~~l~~G~r~~-~-----------P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 527 -------PTEELLEFLKEGNRME-Q-----------PEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred -------cHHHHHHHHhcCCCCC-C-----------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1112233444433211 1 1255788999999999999999999999999999864
No 365
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=307.24 Aligned_cols=257 Identities=18% Similarity=0.141 Sum_probs=204.5
Q ss_pred HHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeec
Q 018816 53 EDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLE 128 (350)
Q Consensus 53 ~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 128 (350)
.++....++|.+..+| |+|+||.|.++++ ..+.-+|+|++++.. .....-|..|-.+|.--+.+.|+.+...|.+
T Consensus 68 ~~lrl~~~DfeilKvI-GrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVI-GRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHhCCHHhhHHHHHh-cccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3445556899999998 9999999999999 455567888887632 2334558888999999999999999999999
Q ss_pred CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 129 AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 129 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
.+++|+||||++||+|-.++.+. ..+++..+..++..|+.||.-|| +.|+|||||||+|||||..|++||+|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeecc
Confidence 99999999999999999999664 47999999999999999999999 99999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTT-----GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
||.|-.+...+.. ...+.+|||.|.+||++.. +.|++.+|+||+||++|||+.|..||+.... ..
T Consensus 219 FGsClkm~~dG~V-~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl---------ve 288 (1317)
T KOG0612|consen 219 FGSCLKMDADGTV-RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL---------VE 288 (1317)
T ss_pred chhHHhcCCCCcE-EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH---------HH
Confidence 9999877654433 3456679999999999863 5699999999999999999999999985432 22
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC---HHHHH
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT---MIDVA 339 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~evl 339 (350)
...+...-.. ..--|. ....++...+||++.+.. |+.|.. ++++-
T Consensus 289 TY~KIm~hk~-~l~FP~---------~~~VSeeakdLI~~ll~~-~e~RLgrngiedik 336 (1317)
T KOG0612|consen 289 TYGKIMNHKE-SLSFPD---------ETDVSEEAKDLIEALLCD-REVRLGRNGIEDIK 336 (1317)
T ss_pred HHHHHhchhh-hcCCCc---------ccccCHHHHHHHHHHhcC-hhhhcccccHHHHH
Confidence 2222221111 110110 014667888999988765 788877 66654
No 366
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.5e-37 Score=273.56 Aligned_cols=261 Identities=18% Similarity=0.182 Sum_probs=196.5
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
|+....| |+|++|.||+|+. .++..|++|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 1 y~~~~~i-g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKL-GEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred Ceeehcc-cccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 3445667 9999999999999 557799999987653 23346678899999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
++ ++|.+++.... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 80 CD-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred cC-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 97 59999986532 36899999999999999999999 899999999999999999999999999998766443
Q ss_pred CccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH----------
Q 018816 219 KTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEK---------- 287 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------- 287 (350)
.. ......++..|+|||.+.+. .++.++|+|||||+++|+++|.+||...... ........
T Consensus 152 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 223 (282)
T cd07829 152 LR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI------DQLFKIFQILGTPTEESW 223 (282)
T ss_pred cc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHHHhCCCcHHHH
Confidence 22 11222357789999998776 7899999999999999999999988643211 00000000
Q ss_pred -HHHhcC-CCccCccccCCCC-ccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 288 -FIRSNG-YMNIDPVIVGDRS-CFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 288 -~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+.... ....-+....... ... ...+..+.+++.+||+.+|++||++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 224 PGVTKLPDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HhhcccccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000 0000000000000 000 023567999999999999999999999875
No 367
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=264.43 Aligned_cols=246 Identities=19% Similarity=0.253 Sum_probs=192.7
Q ss_pred ccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCC
Q 018816 65 RNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
..-| |+|..|.|++.+. ..+..+|||.+.... ....+++...+.++..- +.|.||+++|+|..+...++.||.|.
T Consensus 97 l~dl-GsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 97 LGDL-GSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred HHhh-cCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 3456 9999999999999 556688999997653 34556777888877655 48999999999999999999999983
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
..++.++..-. +++++...-++...+++||.||.. .++|+|||+||+|||+|..|++|++|||.+-.+.....
T Consensus 175 ~C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA- 247 (391)
T KOG0983|consen 175 TCAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA- 247 (391)
T ss_pred HHHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc-
Confidence 34455544332 578999999999999999999996 67999999999999999999999999999977655443
Q ss_pred ccccccccCCCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccC
Q 018816 222 IKASTAIGSLEFAAPEYLTT---GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNID 298 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
.+...|.+.|||||.+.- ..|...+||||||++++||.||+.||...... +.. +.+.+. ...
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-----Fe~---ltkvln-~eP---- 312 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-----FEV---LTKVLN-EEP---- 312 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----HHH---HHHHHh-cCC----
Confidence 233348999999998864 35889999999999999999999999875431 211 122222 112
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 299 PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
|.+.+. ..++..+.+++..||+.|+.+||.-.++++
T Consensus 313 P~L~~~------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 313 PLLPGH------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCCCcc------cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 222222 135678999999999999999999998876
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7.7e-37 Score=279.98 Aligned_cols=269 Identities=15% Similarity=0.167 Sum_probs=190.4
Q ss_pred CcccccccccCCCceEEEEEEEC-C--CceEEEEEecccc--hhhHHHHHHHHHHHHhc-CCCCccceeeeeecC----C
Q 018816 61 NYSMRNITIDEIEGYILYMGFLR-D--RGPILVMKYRKSV--RYASERCFNNIVFASQM-NHKSILKLIGCCLEA----E 130 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~-~--~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----~ 130 (350)
+|.....| |+|+||.||++... . +..||+|++.... ......+.+|+.++.++ +||||+++++.+... .
T Consensus 1 ~y~~~~~l-g~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKEL-GQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEc-cccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 36667778 99999999999993 3 6689999886432 22345678899999999 599999999875432 4
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++++||++ ++|.+++... ..+++..+..++.||+.||.||| +.+++|+||||+||+++.++.++|+|||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 5788899885 6898888543 56899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccc--cccccccCCCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC------cchH
Q 018816 211 LSKSIPEGKTHI--KASTAIGSLEFAAPEYLTT-GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS------NFFI 281 (350)
Q Consensus 211 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~------~~~~ 281 (350)
.+.......... ......|+..|+|||++.+ ..++.++|+|||||++|+|++|.+||.......... ....
T Consensus 151 ~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (332)
T cd07857 151 LARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD 230 (332)
T ss_pred CceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC
Confidence 997654322211 1223458899999998765 468999999999999999999999987533110000 0000
Q ss_pred HHHHHHHHHhcCC---CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 282 TDRVEKFIRSNGY---MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 282 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
............. ............... ...+..+.+++.+||+.||++|||+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIF-PNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhC-CCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 000000000000000 012467899999999999999999999875
No 369
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.6e-38 Score=268.76 Aligned_cols=276 Identities=17% Similarity=0.177 Sum_probs=201.8
Q ss_pred cCcccccccccCCCceEEEEEEE---CC--CceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeec-CCc
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL---RD--RGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLE-AEM 131 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~---~~--~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~ 131 (350)
..|.....| |+|.||.||++.. ++ +..+|||++..... .-.....+|+.+++.++|||++.+..++.+ +..
T Consensus 24 ~~ye~ig~I-g~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKI-GRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHhhcccee-cccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 456666777 9999999999976 22 23789999876532 223457799999999999999999999887 778
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC----CceeEc
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE----YAAKLF 207 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~----~~~kl~ 207 (350)
.++++||.+ .+|.+.|+.........++...+..|+.||+.|+.||| ++=|+||||||+|||+..+ |.|||+
T Consensus 103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 999999996 69999886543333367899999999999999999999 9999999999999999877 999999
Q ss_pred ccCCCccCCCCCccc-cccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH
Q 018816 208 DFSLSKSIPEGKTHI-KASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
|||+++.+...-... .....+-|+.|.|||.+.+.. ||++.|+||+|||+.||++-.+.|.....-......+..+.+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999999886543322 334455799999999999865 999999999999999999999888754332222212222222
Q ss_pred HHHHHhcCC--CccCccccCCCCc------c---------ch------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 286 EKFIRSNGY--MNIDPVIVGDRSC------F---------RK------EEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 286 ~~~~~~~~~--~~~~~~~~~~~~~------~---------~~------~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+.--+. ...-|.+..-... + .+ ..-++...+|+.++|..||-+|.|+++.++
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 222221110 0000111000000 0 00 001234789999999999999999999876
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.1e-36 Score=267.21 Aligned_cols=236 Identities=22% Similarity=0.188 Sum_probs=191.6
Q ss_pred ccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 69 IDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 69 ig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
+|.|++|.||++.. .++..+++|.+..... .....+..|+.++++++||||+++++.+.+++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 49999999999999 4577999999866432 2456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKA 224 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 224 (350)
.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~ 150 (250)
T cd05123 81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RT 150 (250)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cc
Confidence 9998654 36899999999999999999999 89999999999999999999999999999876644321 12
Q ss_pred cccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 225 STAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 225 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
....++..|+|||...+...+.++|+||||+++|++++|..||..... ....... .... ..+.
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~-~~~~-~~~~------ 213 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---------KEIYEKI-LKDP-LRFP------ 213 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHH-hcCC-CCCC------
Confidence 334478899999999888889999999999999999999999864321 1111111 1111 0011
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMID 337 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~e 337 (350)
...+..+.+++.+||..||++|||+.+
T Consensus 214 ------~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 ------EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 123467889999999999999999944
No 371
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=268.65 Aligned_cols=241 Identities=16% Similarity=0.117 Sum_probs=199.5
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
.++|+..++| |+|.||.|-+++- ..++.+|+|.+.+..- .....-..|-.+|...+||.+..+-..|+..+.+|+
T Consensus 167 m~dFdfLKvL-GkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVL-GKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHh-cCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3688888999 9999999999998 5667889999877643 233344567889999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||||..||.|.-++... ..+++.....+-..|+.||.||| +++||+||||.+|.|+|.+|++||+|||+++.
T Consensus 246 VMeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchh
Confidence 99999999999888664 57899999999999999999999 99999999999999999999999999999986
Q ss_pred CCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
-... .....+.+|||.|+|||++....|..+.|.|.+||++|||++|+.||..... ..+..++-...
T Consensus 318 ~I~~--g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh----------~kLFeLIl~ed- 384 (516)
T KOG0690|consen 318 EIKY--GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH----------EKLFELILMED- 384 (516)
T ss_pred cccc--cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch----------hHHHHHHHhhh-
Confidence 4332 2346778899999999999999999999999999999999999999986532 11111211111
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP 333 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 333 (350)
..- +...+++...|+...|..||.+|.
T Consensus 385 -~kF-----------Pr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 385 -LKF-----------PRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -ccC-----------CccCCHHHHHHHHHHhhcChHhhc
Confidence 000 114456788999999999999995
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.3e-37 Score=282.26 Aligned_cols=258 Identities=18% Similarity=0.236 Sum_probs=195.8
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc--
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEM-- 131 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 131 (350)
...++|.....| |+|++|.||+|.. .++..||+|++... .......+.+|+.++++++||||+++.+++...+.
T Consensus 12 ~~~~~y~~~~~i-g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 12 EVPDRYQNLSPV-GSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred cccCceEEEEEe-ccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 346788888888 9999999999999 55678999988643 22334567789999999999999999998876554
Q ss_pred ----CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc
Q 018816 132 ----PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF 207 (350)
Q Consensus 132 ----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~ 207 (350)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEc
Confidence 89999999 6799998854 46899999999999999999999 9999999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 018816 208 DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 208 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
|||++...... .....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...... ..+.
T Consensus 161 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~---------~~~~ 226 (343)
T cd07851 161 DFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI---------DQLK 226 (343)
T ss_pred ccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---------HHHH
Confidence 99998765432 2233478899999988653 6789999999999999999999998643221 0111
Q ss_pred HHHHhcC--C---------C----ccC---ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 287 KFIRSNG--Y---------M----NID---PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 287 ~~~~~~~--~---------~----~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
....... . . ... .......... ....+..+.+++.+||+.+|++|||+.+|+.
T Consensus 227 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 227 RIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV-FSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH-hccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 1100000 0 0 000 0000000000 0023567999999999999999999999976
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.6e-36 Score=264.67 Aligned_cols=220 Identities=19% Similarity=0.113 Sum_probs=176.5
Q ss_pred CCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhC
Q 018816 72 IEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYG 150 (350)
Q Consensus 72 G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 150 (350)
|.+|.||++.+ .++..||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999999999 667789999986643 233455555566799999999999999999999999999999998865
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccC
Q 018816 151 PLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt 230 (350)
. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++++|||.+....... ....++
T Consensus 79 ~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~ 145 (237)
T cd05576 79 F-----LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVE 145 (237)
T ss_pred h-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcC
Confidence 3 45899999999999999999999 9999999999999999999999999999876554321 122357
Q ss_pred CCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccch
Q 018816 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRK 310 (350)
Q Consensus 231 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (350)
..|+|||...+..++.++|+||+|+++|||++|..|+...... ... ...+ .+ +
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~--~~~~--~~--------~ 198 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INT--HTTL--NI--------P 198 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------ccc--cccc--CC--------c
Confidence 7899999998888999999999999999999999886532110 000 0000 00 0
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHH
Q 018816 311 EEKLQAYVELAFKCLSHSAEDRPTMI 336 (350)
Q Consensus 311 ~~~~~~l~~l~~~cl~~~P~~RPt~~ 336 (350)
...+..+.+++.+||+.||++||++.
T Consensus 199 ~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 199 EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 13346789999999999999999973
No 374
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=280.14 Aligned_cols=253 Identities=18% Similarity=0.192 Sum_probs=203.4
Q ss_pred HHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCc
Q 018816 55 LKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEAEM 131 (350)
Q Consensus 55 l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 131 (350)
+....+-|. +++| |+|.||+||-|++ ++|+.||||.+.+.. ......+.+|+.||.++.||.||.+-.-|++.+.
T Consensus 560 ~stvYQif~-devL-GSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFA-DEVL-GSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhh-Hhhc-cCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce
Confidence 333333343 4567 9999999999999 888899999997642 2445778999999999999999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC---CceeEcc
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE---YAAKLFD 208 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~---~~~kl~D 208 (350)
.+.|||-+. |+..+.|..... +.+++.....++.||+.||.||| .++|+|+||||+|||+.+. .++||+|
T Consensus 638 vFVVMEKl~-GDMLEMILSsEk---gRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 638 VFVVMEKLH-GDMLEMILSSEK---GRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred EEEEehhhc-chHHHHHHHhhc---ccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeecc
Confidence 999999995 565555544332 67999999999999999999999 9999999999999999754 5689999
Q ss_pred cCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 209 FSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 209 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
||+|+.++.... ....+|||.|+|||++.+..|+..-|+||.|||+|--++|..||....+. ...
T Consensus 711 FGfARiIgEksF---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI------------ndQ 775 (888)
T KOG4236|consen 711 FGFARIIGEKSF---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI------------NDQ 775 (888)
T ss_pred ccceeecchhhh---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch------------hHH
Confidence 999999987665 34566999999999999999999999999999999999999999865442 122
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+........-+ .+.+....+||...|+..-.+|-|.+.-+.
T Consensus 776 IQNAaFMyPp~PW---------~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 776 IQNAAFMYPPNPW---------SEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hhccccccCCCch---------hhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 2221111100001 266677889999999999999998877654
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=7.8e-36 Score=295.39 Aligned_cols=146 Identities=21% Similarity=0.112 Sum_probs=130.0
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
.++|.....| |+|+||.||+|.+ .++..||+|.+.... ......+..|+.++..++||||+++++++......++
T Consensus 3 ~~~y~i~~~L-G~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPI-SRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEE-ecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 3678888888 9999999999999 467799999986542 2234668899999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
||||+++++|.+++... ..+++..++.++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999998653 45788999999999999999999 8999999999999999999999999999875
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=287.58 Aligned_cols=259 Identities=18% Similarity=0.209 Sum_probs=210.6
Q ss_pred HHHHHHHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeee--
Q 018816 52 SEDLKTAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCL-- 127 (350)
Q Consensus 52 ~~~l~~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~-- 127 (350)
++.+..-++-|.+..++ |.|.+|.||+++. ++++..|+|++.... +..+++..|..+++.+ .|||++.++|++.
T Consensus 11 ~~~lpdp~d~~ei~evi-g~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVI-GNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred hhhCCCCCCccEEEEEE-eeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 33344456778888888 9999999999999 667677888876654 4456677889999988 5999999999986
Q ss_pred ---cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCce
Q 018816 128 ---EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA 204 (350)
Q Consensus 128 ---~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~ 204 (350)
.++.+|||||||.+||..|++.+..+ ..+.|..+..|++.++.|+.+|| ...++|||||-.|||++.++.|
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g---~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKG---NRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcc---cchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcE
Confidence 35689999999999999999977552 68999999999999999999999 9999999999999999999999
Q ss_pred eEcccCCCccCCCCCccccccccccCCCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcc
Q 018816 205 KLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG-----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNF 279 (350)
Q Consensus 205 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 279 (350)
||.|||.+....... ....+.+||+.|||||++... .|+..+|+||||++..||.-|.+|+...++.
T Consensus 163 KLvDFGvSaQldsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------ 234 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------ 234 (953)
T ss_pred EEeeeeeeeeeeccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh------
Confidence 999999998775433 345677799999999999754 4778999999999999999999999877763
Q ss_pred hHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 280 FITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+.++.- .....|.+. .+...++++.++|..||..|-..||++.++++
T Consensus 235 ------raLF~I--pRNPPPkLk------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 235 ------RALFLI--PRNPPPKLK------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------hhhccC--CCCCCcccc------chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111110 011111111 12467889999999999999999999999875
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=280.49 Aligned_cols=239 Identities=23% Similarity=0.211 Sum_probs=193.0
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++.|.....+ |.|+|+.|-.+.+ ..+...++|.+.+.. .+..+|+.++... +||||+++.+.+.++.+.++||
T Consensus 321 ~~~y~~~~~~-~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREEL-GEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhcccccc-CCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 4566666677 9999999999999 566688999987662 2234577666655 7999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe-CCCCceeEcccCCCccC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF-QEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill-~~~~~~kl~Dfg~~~~~ 215 (350)
|.+.++-+.+.+... +.....+..|+.+|+.|+.||| .+|++||||||+|||+ ++.++++|+|||.++..
T Consensus 396 e~l~g~ell~ri~~~------~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK------PEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred hhccccHHHHHHHhc------chhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 999999888887653 2233777889999999999999 9999999999999999 68999999999999876
Q ss_pred CCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 216 PEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
... ..+.+-|..|.|||++....|++++|+||||++||+|++|+.||...... ......+.. .
T Consensus 467 ~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---------~ei~~~i~~---~ 529 (612)
T KOG0603|consen 467 ERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---------IEIHTRIQM---P 529 (612)
T ss_pred chh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------HHHHHhhcC---C
Confidence 544 23445788999999999889999999999999999999999998755321 111111111 1
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... ...+...++|+.+||+.||.+||++.++..
T Consensus 530 ~~s------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 530 KFS------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccc------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111 256678999999999999999999999875
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=265.73 Aligned_cols=241 Identities=15% Similarity=0.147 Sum_probs=197.1
Q ss_pred hcCcccccccccCCCceEEEEEEECC-CceEEEEEecccch---hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRD-RGPILVMKYRKSVR---YASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~-~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 133 (350)
..+|....+| |+|+||.|.++..++ ...+|||.+.++.- ++.+--+.|-.+|+.. +-|.++++..++++-+.+|
T Consensus 348 ~tDFnFl~Vl-GKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVL-GKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred ecccceEEEe-ccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3578888888 999999999999844 45789998876532 3334455677777766 5788999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+||||+.||+|.-.++.- +.+.+..+..++..||-||-+|| +++|++||||.+||++|.+|++||+|||+++
T Consensus 427 FVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred eEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccc
Confidence 999999999999888653 68999999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
..-... ..+.+.+|||.|+|||++...+|+.++|+||+||+||||+.|++||+.... +.+...+....
T Consensus 499 Eni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE----------~elF~aI~ehn 566 (683)
T KOG0696|consen 499 ENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE----------DELFQAIMEHN 566 (683)
T ss_pred ccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH----------HHHHHHHHHcc
Confidence 654332 235677899999999999999999999999999999999999999985432 11222222211
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP 333 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 333 (350)
.. .+...+.+..+++...|...|.+|.
T Consensus 567 vs-------------yPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 567 VS-------------YPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred Cc-------------CcccccHHHHHHHHHHhhcCCcccc
Confidence 10 0125677888999999999999995
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-34 Score=252.58 Aligned_cols=238 Identities=24% Similarity=0.237 Sum_probs=193.1
Q ss_pred CceEEEEEEEC-CCceEEEEEecccchhh-HHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhC
Q 018816 73 EGYILYMGFLR-DRGPILVMKYRKSVRYA-SERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYG 150 (350)
Q Consensus 73 ~~g~V~~~~~~-~~~~vaik~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 150 (350)
+||.||+|... ++..+++|.+....... .+.+.+|+..+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999994 47799999987765443 67899999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccC
Q 018816 151 PLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt 230 (350)
. ..+++..+..++.+++.++.+|| +.+++|+||+|.||+++.++.++|+|||.+....... ......++
T Consensus 81 ~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 81 R-----GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred c-----cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 3 23889999999999999999999 8999999999999999999999999999988765432 12234478
Q ss_pred CCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccch
Q 018816 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRK 310 (350)
Q Consensus 231 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (350)
..|++||.+....++.++|+||||++++++++|..||..... ...................
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~---------- 210 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ---------LLELFKKIGKPKPPFPPPE---------- 210 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHhccCCCCcccc----------
Confidence 899999999888899999999999999999999999864211 1111122221111110000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 311 EEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 311 ~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+..+.+++.+||..+|++||++.++++
T Consensus 211 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 211 WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 014567999999999999999999999986
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=268.36 Aligned_cols=256 Identities=20% Similarity=0.225 Sum_probs=195.3
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEe--cccchhhH-----HHHHHHHHHHHhcCCCCccceeeeee-cC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKY--RKSVRYAS-----ERCFNNIVFASQMNHKSILKLIGCCL-EA 129 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~--~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~-~~ 129 (350)
.+.|-..+.| |+|||+.||++.+ ...+-||+|.- ++...... +...+|..|.+.|+||.||++|+++. +.
T Consensus 462 n~RYLlLhLL-GrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 462 NDRYLLLHLL-GRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHHHHHHHh-ccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3456666777 9999999999999 55557777773 44433322 34668999999999999999999987 56
Q ss_pred CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC---CCceeE
Q 018816 130 EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE---EYAAKL 206 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~---~~~~kl 206 (350)
+.+|-|+|||+|-+|..+|... ..+++.++..|+.||+.||.||..- ..+|||.||||.|||+.+ .|.+||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEe
Confidence 6899999999999999998654 5789999999999999999999854 679999999999999954 478999
Q ss_pred cccCCCccCCCCCcc-----ccccccccCCCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 018816 207 FDFSLSKSIPEGKTH-----IKASTAIGSLEFAAPEYLTTG----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGS 277 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 277 (350)
+|||+++.+...... ..+....||..|++||.+.-+ ..+.++||||+|||+|..+.|+.||.....
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs----- 689 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS----- 689 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-----
Confidence 999999988654432 224556699999999988644 478999999999999999999999974321
Q ss_pred cchHHHHHHHHHHhcCCCccC-ccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 018816 278 NFFITDRVEKFIRSNGYMNID-PVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVA 339 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl 339 (350)
..+ .+..+. ++. ..+.... ....+.+...+|++||++.-++|....++.
T Consensus 690 ---QQd----ILqeNT--IlkAtEVqFP~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 690 ---QQD----ILQENT--ILKATEVQFPP----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---HHH----HHhhhc--hhcceeccCCC----CCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 111 111111 000 0000000 014567788999999999999998877664
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=232.04 Aligned_cols=260 Identities=16% Similarity=0.173 Sum_probs=195.0
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
+|...+.| |+|.||+||+|+. .....||+|+..-++. .--....+|+-+++.++|.|||++++....+..+.+|+|
T Consensus 3 ~ydkmeki-gegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKI-GEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhh-cCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 45555677 9999999999999 5566788898765432 223567899999999999999999999999999999999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
||+ .+|..+...-. +.++......++.|++.||.|+| ++++.||||||.|.||+.+|.+|++|||+++.++-
T Consensus 82 ~cd-qdlkkyfdsln----g~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 82 FCD-QDLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred Hhh-HHHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 995 68888775433 67899999999999999999999 99999999999999999999999999999998765
Q ss_pred CCccccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHHhcC--
Q 018816 218 GKTHIKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRVEKFIRSNG-- 293 (350)
Q Consensus 218 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (350)
+... .+..+-|..|.+|.++.+.. |++..|+||.||++.|+.. |++.|..... .+.+...+..-+
T Consensus 154 pvrc--ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv---------ddqlkrif~~lg~p 222 (292)
T KOG0662|consen 154 PVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---------DDQLKRIFRLLGTP 222 (292)
T ss_pred ceEe--eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH---------HHHHHHHHHHhCCC
Confidence 4432 33344689999999998865 8999999999999999987 5555553322 112222221111
Q ss_pred CCccCccc--------cCCCCccch-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 294 YMNIDPVI--------VGDRSCFRK-----EEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 294 ~~~~~~~~--------~~~~~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+.--|.+ ...++.... ......-.+|+...|.-+|..|.++++.++
T Consensus 223 ~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 223 TEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 00000110 011110000 122334578999999999999999998775
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-37 Score=256.30 Aligned_cols=252 Identities=17% Similarity=0.154 Sum_probs=191.2
Q ss_pred cccccCCCceEEEEEEE-CCCceEEEEEecccch-hhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecCCCC
Q 018816 66 NITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR-YASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
..| |.|+||+|++-.+ ..+...|||++..... .+..++..|.+...+- +.||||+++|.+...+..|+.||.|+ .
T Consensus 70 g~i-G~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 70 GEI-GNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHh-cCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 456 9999999999999 6677899999976543 5667888888866555 68999999999999999999999995 5
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
||..+...........+++...-+|....+.||.||-. ...|+|||+||+|||++..|.+||+|||.+-.+...-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si--- 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI--- 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH---
Confidence 66554321111111468888888899999999999986 6789999999999999999999999999986553322
Q ss_pred cccccccCCCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcc
Q 018816 223 KASTAIGSLEFAAPEYLTTG--YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPV 300 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
..+...|...|||||.+... .|..+||+||||++|+|+.||..|+..... +-+.+...+.. ..+.+...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--------vfeql~~Vv~g-dpp~l~~~ 293 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--------VFEQLCQVVIG-DPPILLFD 293 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--------HHHHHHHHHcC-CCCeecCc
Confidence 23344588999999998653 489999999999999999999999874321 12222222222 12222221
Q ss_pred ccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 301 IVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... -+.+..+..++..||..|-+.||+..++++
T Consensus 294 ~~~-------~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 KEC-------VHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccc-------cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111 145678999999999999999999998875
No 383
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=258.03 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=211.7
Q ss_pred HhcCcccccccccCCCceEEEEEEE------CCCceEEEEEeccc-chhhHHHHHHHHHHHHhcCCCCccceeeeeec-C
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL------RDRGPILVMKYRKS-VRYASERCFNNIVFASQMNHKSILKLIGCCLE-A 129 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~------~~~~~vaik~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~ 129 (350)
...++.....+ -+|.||.||.|.+ .+.+.|.+|.+... ++-....+..|.-.+..+.|||+..+.+++.+ .
T Consensus 282 ~r~Rv~l~~ll-qEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 282 QRCRVRLSCLL-QEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhheechhhh-hcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 34567777778 9999999999966 34446777776543 33455678899999999999999999999875 4
Q ss_pred CcCeEEeecCCCCchhhhhhCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeE
Q 018816 130 EMPALVYEPAGYCTLADRLYGP---LQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKL 206 (350)
Q Consensus 130 ~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl 206 (350)
..++.++.++..|+|..++... .......++..+...++.|++.|+.||| .+++||.||..+|++||+...+||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEe
Confidence 5788999999999999999721 1122356888899999999999999999 999999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 018816 207 FDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
+|=.+++...+....-.......+..||+||.+.+..|+.++|+|||||++|||+| |+.|+-.-.+ . .+
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP------f----Em 507 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP------F----EM 507 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH------H----HH
Confidence 99999988766655444333446889999999999999999999999999999998 8888764322 1 22
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
...+.+ ++..-.| .++++++..++..||...|++||+++++...|.++..+
T Consensus 508 ~~ylkd-GyRlaQP-----------~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 508 EHYLKD-GYRLAQP-----------FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HHHHhc-cceecCC-----------CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 223332 2222222 26789999999999999999999999999999987543
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-37 Score=254.63 Aligned_cols=267 Identities=16% Similarity=0.179 Sum_probs=195.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecC-------
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEA------- 129 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 129 (350)
+.|.....+ |+|.||.||+++. +.++.||+|+...... .--....+|+++|..|.|+|++.++..|...
T Consensus 17 ~~yek~~ki-gqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKI-GQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhc-CCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 344555667 9999999999999 6666788887644221 1224567999999999999999999988642
Q ss_pred -CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcc
Q 018816 130 -EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFD 208 (350)
Q Consensus 130 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~D 208 (350)
..+++||.+|+ .+|...+.+.. ..++..++.+++.++..||.|+| ...|+|||+||+|+||+.+|.+||+|
T Consensus 96 r~t~ylVf~~ce-hDLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 96 RATFYLVFDFCE-HDLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred cceeeeeHHHhh-hhHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeec
Confidence 25899999996 58888886653 47899999999999999999999 89999999999999999999999999
Q ss_pred cCCCccCCCCCccc--cccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH
Q 018816 209 FSLSKSIPEGKTHI--KASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 209 fg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
||+++.+....... ..+..+-|..|.+||.+.+. .|+++.|||+.||++.||+++.+.+..... .......
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte------qqql~~I 241 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE------QQQLHLI 241 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH------HHHHHHH
Confidence 99997665433322 22344468999999999876 599999999999999999999998875432 2222222
Q ss_pred HHHHHhcCC---Ccc-----------CccccCCCCccc----hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 286 EKFIRSNGY---MNI-----------DPVIVGDRSCFR----KEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 286 ~~~~~~~~~---~~~-----------~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
..+...... +.. .|...+...... +..-.++..+|+.+++..||.+|+++.+++..
T Consensus 242 s~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 242 SQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 222211110 001 111111111000 00112367899999999999999999998753
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=256.78 Aligned_cols=265 Identities=19% Similarity=0.219 Sum_probs=201.5
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC--CCC----ccceeeeeecCCc
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN--HKS----ILKLIGCCLEAEM 131 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~~~~~~~~~~~ 131 (350)
++.|.+...+ |+|.||.|-.+.+ ..+..||+|.+..-. ...+..+-|+.+|.++. .|+ +|++.+||.-.++
T Consensus 88 ~~Ry~i~~~l-GeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLL-GEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhh-cCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 6788888888 9999999999999 445688888886543 34566778999999994 233 7889999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-----------
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE----------- 200 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~----------- 200 (350)
.|+|+|.+ |.|+.+++..+. ..+++..++..++.|++.+++||| +.+++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred eEEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCC
Confidence 99999998 679999997643 368999999999999999999999 999999999999999932
Q ss_pred ---------CCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 018816 201 ---------EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271 (350)
Q Consensus 201 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 271 (350)
+..++|+|||.|....... .+.+.|..|.|||++.+-.++.++||||+||||+|+.+|...|....
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 3458999999998754433 45568999999999999999999999999999999999999988654
Q ss_pred ccC---------CCCcchHHHH--HHHHHHhcCCCccC-ccc--cC-------CCCc-----cchHHHHHHHHHHHHHcc
Q 018816 272 LAT---------GGSNFFITDR--VEKFIRSNGYMNID-PVI--VG-------DRSC-----FRKEEKLQAYVELAFKCL 325 (350)
Q Consensus 272 ~~~---------~~~~~~~~~~--~~~~~~~~~~~~~~-~~~--~~-------~~~~-----~~~~~~~~~l~~l~~~cl 325 (350)
..+ +..+...... ..+....+. +| +.. .+ ...+ ...+....++.+|+..||
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~r---ldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGR---LDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhccc---ccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 211 1111111111 122222221 11 000 00 0000 001355667999999999
Q ss_pred ccCCCCCCCHHHHHH
Q 018816 326 SHSAEDRPTMIDVAK 340 (350)
Q Consensus 326 ~~~P~~RPt~~evl~ 340 (350)
..||.+|+|+.|++.
T Consensus 391 ~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 391 EFDPARRITLREALS 405 (415)
T ss_pred ccCccccccHHHHhc
Confidence 999999999999986
No 386
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=272.67 Aligned_cols=241 Identities=17% Similarity=0.125 Sum_probs=199.1
Q ss_pred CcccccccccCCCceEEEEEEECCCc-eEEEEEeccc---chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRDRG-PILVMKYRKS---VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~~~-~vaik~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++.....| |-|+||.|=++..+... .+|+|.+++. +....+.+..|-.+|...+.|.||++|-.|.+....|++|
T Consensus 421 dl~~iaTL-GvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATL-GVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhc-ccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34445567 99999999999985443 4787777654 2345667889999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|-|-||.|...+.+. +.+.......++..++.|++||| .++||+|||||+|.+++.+|-+||.|||+|+.+.
T Consensus 500 EaClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 500 EACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred HhhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999775 67899999999999999999999 9999999999999999999999999999999987
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCc
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMN 296 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
.+. .+.+.+|||.|.|||++.+.....++|.||||+++|||++|.+||....+. . .-+.+-++-...
T Consensus 572 ~g~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm------k----tYn~ILkGid~i 638 (732)
T KOG0614|consen 572 SGR---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM------K----TYNLILKGIDKI 638 (732)
T ss_pred cCC---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH------H----HHHHHHhhhhhh
Confidence 655 466788999999999999999999999999999999999999999865542 1 111121211111
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCC
Q 018816 297 IDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPT 334 (350)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt 334 (350)
--| ...++...+|+.+....+|.+|.-
T Consensus 639 ~~P-----------r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 EFP-----------RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hcc-----------cccchhHHHHHHHHHhcCcHhhhc
Confidence 111 144566788999999999999964
No 387
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-34 Score=266.63 Aligned_cols=205 Identities=16% Similarity=0.106 Sum_probs=174.4
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchh---hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRY---ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 134 (350)
..-|...+.| |-|+||.|.++.. +....+|.|.+.+.+-. ....+..|-.||..-+.+.||+||..|.+.+.+|+
T Consensus 628 KSmFvkik~i-GvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 628 KSMFVKIKTI-GVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred ccceEEEeee-cccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence 3567777788 9999999999998 45557888888776432 33446689999999999999999999999999999
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
||+|++||++..+|... +-+.+..+..++.++..|+++.| ..|+|||||||+|||||.+|++||+|||+|.-
T Consensus 707 VMdYIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred EEeccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccccc
Confidence 99999999999988653 56888889999999999999999 99999999999999999999999999999865
Q ss_pred CCCCCc----------------------------------------cccccccccCCCCCCccccccCCCCccchhHHHH
Q 018816 215 IPEGKT----------------------------------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFG 254 (350)
Q Consensus 215 ~~~~~~----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 254 (350)
+..... .......+||+.|+|||++....|+..+|+||.|
T Consensus 779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~g 858 (1034)
T KOG0608|consen 779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVG 858 (1034)
T ss_pred ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhh
Confidence 532110 0001125699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCcc
Q 018816 255 KLLLVLLTGRTIGHLSRL 272 (350)
Q Consensus 255 ~il~el~tg~~p~~~~~~ 272 (350)
||||||+.|++||....+
T Consensus 859 vil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 859 VILYEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHHHHhhCCCCccCCCC
Confidence 999999999999986654
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.2e-34 Score=278.67 Aligned_cols=261 Identities=16% Similarity=0.124 Sum_probs=168.7
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CC----CceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeee------e
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RD----RGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGC------C 126 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~----~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~------~ 126 (350)
..++|...+.| |+|+||.||+|++ .+ +..||+|++..... .+...+| .+....+.++..+... +
T Consensus 130 ~~~~y~l~~~L-G~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKL-GEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEE-eeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 56789999999 9999999999999 44 57999999765321 1111111 1222223333322222 2
Q ss_pred ecCCcCeEEeecCCCCchhhhhhCCCCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeecc
Q 018816 127 LEAEMPALVYEPAGYCTLADRLYGPLQTH---------------LEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI 191 (350)
Q Consensus 127 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 191 (350)
.+....++|+||+++++|.+++....... ........+..++.||+.||.||| +.+|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcC
Confidence 45668999999999999999886432100 001123345679999999999999 999999999
Q ss_pred ccCceEeCC-CCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCC----------------------CCccc
Q 018816 192 EPWNILFQE-EYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGY----------------------YNEKT 248 (350)
Q Consensus 192 kp~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~ 248 (350)
||+|||++. ++.+||+|||+++........ ......+++.|+|||.+.... ++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999986 588999999999765433222 233455899999999664321 33456
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC----------CCccCccccCCCCccchHHHHHHHH
Q 018816 249 DVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG----------YMNIDPVIVGDRSCFRKEEKLQAYV 318 (350)
Q Consensus 249 DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (350)
|||||||++|||+++..+++... .. ....+.... .....+.+....... +.......
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~----------~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~~~~ 427 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNL----------IQ-FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVL--DLDGGAGW 427 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHH----------HH-HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhc--cccchHHH
Confidence 99999999999999766543210 00 001111100 000000000000000 01123456
Q ss_pred HHHHHccccCCCCCCCHHHHHH
Q 018816 319 ELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 319 ~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+|+.+||+.||++|||+.++++
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhC
Confidence 8999999999999999999987
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=278.80 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=190.0
Q ss_pred cccccccccCCCce-EEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCeEEeecC
Q 018816 62 YSMRNITIDEIEGY-ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 62 f~~~~~lig~G~~g-~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
|...+++ |.|+.| .||+|...+. .||||++.... .....+|+..|..- +|||||++++.-.+..+.||..|.|
T Consensus 511 ~~~~eil-G~Gs~Gt~Vf~G~ye~R-~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEIL-GYGSNGTVVFRGVYEGR-EVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHc-ccCCCCcEEEEEeeCCc-eehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 5556667 999876 7999999887 99999986643 34567999999888 5999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC---C--CceeEcccCCCcc
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE---E--YAAKLFDFSLSKS 214 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~---~--~~~kl~Dfg~~~~ 214 (350)
..+|.+++... ........-...+.+..|++.||++|| +.+||||||||.||||+. + ..++|+|||+|+.
T Consensus 586 -~~sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 586 -ACSLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred -hhhHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 58999999764 111111222456788999999999999 899999999999999976 2 5689999999998
Q ss_pred CCCCCccc-cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHHHhc
Q 018816 215 IPEGKTHI-KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG-RTIGHLSRLATGGSNFFITDRVEKFIRSN 292 (350)
Q Consensus 215 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
...+.... ......||-+|+|||++....-+.++||||+||++|+.++| ..||...-.. -.+ +-.+
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-----------~~N-Il~~ 728 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-----------QAN-ILTG 728 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-----------hhh-hhcC
Confidence 87665433 24566699999999999998888999999999999999986 8888743210 000 1111
Q ss_pred CCC--ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 293 GYM--NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 293 ~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
... .+.+. .++ +..+||.+|++.+|..||++.+|+.
T Consensus 729 ~~~L~~L~~~----------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 729 NYTLVHLEPL----------PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ccceeeeccC----------chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 11110 022 7889999999999999999999985
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=267.06 Aligned_cols=268 Identities=16% Similarity=0.163 Sum_probs=181.5
Q ss_pred HhcCcccccccccCCCceEEEEEEE-----------------CCCceEEEEEecccchhhHHH--------------HHH
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-----------------RDRGPILVMKYRKSVRYASER--------------CFN 106 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-----------------~~~~~vaik~~~~~~~~~~~~--------------~~~ 106 (350)
..++|...++| |+|+||.||+|.+ .++..||||++........++ ...
T Consensus 143 ~~d~F~i~~~L-G~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKL-GGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEe-ecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 46789999999 9999999999975 234579999986543322222 334
Q ss_pred HHHHHHhcCCCCc-----cceeeeeec--------CCcCeEEeecCCCCchhhhhhCCCCC-------------------
Q 018816 107 NIVFASQMNHKSI-----LKLIGCCLE--------AEMPALVYEPAGYCTLADRLYGPLQT------------------- 154 (350)
Q Consensus 107 E~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~~~~------------------- 154 (350)
|+..+.+++|.++ ++++++|.. ....+|||||+++++|.++++.....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6677777766554 677777753 34689999999999999998643210
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCC
Q 018816 155 HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA 234 (350)
Q Consensus 155 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~ 234 (350)
....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......... ......+++.|+
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~ 377 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYS 377 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCccee
Confidence 0023567788999999999999999 899999999999999999999999999998765432221 112223578999
Q ss_pred CccccccCCC----------------------CccchhHHHHHHHHHHHhCCC-CCCCCcccCCCCcchHHHHHHHHHHh
Q 018816 235 APEYLTTGYY----------------------NEKTDVYSFGKLLLVLLTGRT-IGHLSRLATGGSNFFITDRVEKFIRS 291 (350)
Q Consensus 235 aPE~~~~~~~----------------------~~~~DiwslG~il~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (350)
|||.+..... ..+.|+||+||++++|++|.. |+....... ............+..
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~--~~~~~~~~~~~~~r~ 455 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN--TELRQYDNDLNRWRM 455 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh--hHHhhccchHHHHHh
Confidence 9998764321 134799999999999999875 554221100 000000000011111
Q ss_pred cCCCccCccccCCCCccchHHHHHHHHHHHHHccccCC---CCCCCHHHHHH
Q 018816 292 NGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSA---EDRPTMIDVAK 340 (350)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P---~~RPt~~evl~ 340 (350)
......+-.. .+..+....+|+.+||..+| .+|+|+.++++
T Consensus 456 ~~~~~~~~~~--------~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 456 YKGQKYDFSL--------LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred hcccCCCccc--------ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000011000 01345678899999999866 68999999986
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=245.20 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=198.9
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc---hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV---RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 133 (350)
-++|....+| |+|+|+.|..+++ +..+.+|+|.+.+.- .....-...|-.+..+- +||.+|-+..+|.+...++
T Consensus 249 l~df~ll~vi-grgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVI-GRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeee-cCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 4688989998 9999999999999 556677888876532 23334455666666666 6999999999999999999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+|.||++||+|...++.. ..++++.+..+...|+.||.||| +.||+.||||.+|+|+|..|++||+|+|.++
T Consensus 328 fvieyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred EEEEEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhh
Confidence 999999999998877654 57999999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcC
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNG 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (350)
...... ..+++.+|||.|.|||.+.+..|....|+|+|||+++||+.|+.||+-.... .......+++.+.+-..+
T Consensus 400 e~l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~--n~d~ntedylfqvilekq 475 (593)
T KOG0695|consen 400 EGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMD--NPDMNTEDYLFQVILEKQ 475 (593)
T ss_pred cCCCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCC--CcccchhHHHHHHHhhhc
Confidence 654332 2467888999999999999999999999999999999999999999865421 222334444444443322
Q ss_pred CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC
Q 018816 294 YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP 333 (350)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 333 (350)
-.+ | ...+-....++..-|..||.+|.
T Consensus 476 iri--p-----------rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 IRI--P-----------RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ccc--c-----------ceeehhhHHHHHHhhcCCcHHhc
Confidence 111 1 13334566788888999999885
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=243.12 Aligned_cols=268 Identities=17% Similarity=0.208 Sum_probs=197.2
Q ss_pred CcccccccccCCCceEEEEEEE-CCCceEEEEEecccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCC-----cC
Q 018816 61 NYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAE-----MP 132 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 132 (350)
+...++-| |-|+||.||.+++ .+++.|+.|++..--. .+.+++.+|++.|.-++|.|++..++...-.. ++
T Consensus 54 Di~PDRPI-GYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPI-GYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcc-cccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 44566777 9999999999999 8888999999865432 45678999999999999999999999876443 56
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
|.++|.+. .+|...|-.. ..++...+.-++.||++||+||| +.+|.||||||.|.|+++|..+||+|||++
T Consensus 133 YV~TELmQ-SDLHKIIVSP-----Q~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSP-----QALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHH-hhhhheeccC-----CCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccc
Confidence 88888884 5777776544 57888899999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCCccccccccccCCCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CCCcchHH
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTGY-YNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GGSNFFIT 282 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~~~~~~~ 282 (350)
+.-....... .+..+-|..|.|||.+.+.. |+.+.||||.||++.||+..+-.|....+.. +....+--
T Consensus 204 Rvee~d~~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaM 282 (449)
T KOG0664|consen 204 RTWDQRDRLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAM 282 (449)
T ss_pred cccchhhhhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHH
Confidence 8765433322 33344688999999999864 9999999999999999999888887554420 00000000
Q ss_pred H----HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 283 D----RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 283 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
. -+...+-++. ...|...--+....+.....+...++.+++..||.+|.+.++.+..
T Consensus 283 r~ACEGAk~H~LR~~--~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 283 KYACEGAKNHVLRAG--LRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHHhhhhHHHhhccC--CCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 0 0111111111 1112221111111122334567788999999999999998887653
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=9.4e-34 Score=231.63 Aligned_cols=259 Identities=16% Similarity=0.228 Sum_probs=200.0
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeeeeecCC--cCeE
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGCCLEAE--MPAL 134 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~l 134 (350)
.++|+..+.+ |+|.+++||.|.. .++..++||.+.+-. .+.+.+|++||..|+ ||||+.+++...++. .+.|
T Consensus 37 ~ddYeivrk~-GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKV-GRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHH-cCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 4678888888 9999999999998 666789999987643 567889999999997 999999999988754 7889
Q ss_pred EeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccCCCc
Q 018816 135 VYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFSLSK 213 (350)
Q Consensus 135 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 213 (350)
|+||+.+.+...+. ..++...+...+.+++.||.|+| ++||+|||+||.|++||.. -.++|+|+|+|-
T Consensus 113 iFE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred HhhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHh
Confidence 99999998887766 67889999999999999999999 9999999999999999964 569999999998
Q ss_pred cCCCCCccccccccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH--------HH
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFIT--------DR 284 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~--------~~ 284 (350)
+..++.. .+..+.+..|-.||.+..- .|.-+-|+|||||++..|+..+.||.-.++-. -++. +.
T Consensus 182 FYHp~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~----DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 182 FYHPGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY----DQLVKIAKVLGTDE 254 (338)
T ss_pred hcCCCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH----HHHHHHHHHhChHH
Confidence 8765543 3455578889999988764 58899999999999999999999987654321 1111 11
Q ss_pred HHHHHHhcCCCccCccccC---C---------CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 285 VEKFIRSNGYMNIDPVIVG---D---------RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+...+.+= .-.+||...+ . .+..+..-.+++..+|+...|..|..+|||+.|.+.
T Consensus 255 l~~Yl~KY-~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 255 LYAYLNKY-QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHH-ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 11111111 1112332211 0 000011123478899999999999999999999875
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=256.32 Aligned_cols=198 Identities=18% Similarity=0.187 Sum_probs=170.6
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHH-----HHHHHHHHHHhcC---CCCccceeeee
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASE-----RCFNNIVFASQMN---HKSILKLIGCC 126 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~-----~~~~E~~~l~~l~---h~niv~~~~~~ 126 (350)
..+|+..+.+ |.|+||.|+++.+ .+...|+||.+.+..- ...+ .+-.|+.||..|+ |+||++++++|
T Consensus 560 ~s~yttlq~l-G~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 560 FSDYTTLQPL-GEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred cccceeeeec-cccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 4568888899 9999999999999 5556888888766431 1111 1447999999997 99999999999
Q ss_pred ecCCcCeEEeecC-CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCcee
Q 018816 127 LEAEMPALVYEPA-GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAK 205 (350)
Q Consensus 127 ~~~~~~~lv~e~~-~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~k 205 (350)
++++.+||+||-. ++.+|+++|... ..+++..+..|+.||+.|+++|| +.+|||||||-+||+++.+|.+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~k 710 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVK 710 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEE
Confidence 9999999999975 677999999765 67999999999999999999999 99999999999999999999999
Q ss_pred EcccCCCccCCCCCccccccccccCCCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCC
Q 018816 206 LFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYY-NEKTDVYSFGKLLLVLLTGRTIGHL 269 (350)
Q Consensus 206 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~el~tg~~p~~~ 269 (350)
|+|||.+....++. ..+.+||..|.|||++.+.+| ....|||++|+++|.++....||++
T Consensus 711 lidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 711 LIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99999998765544 345679999999999999886 5778999999999999999999863
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=225.27 Aligned_cols=207 Identities=16% Similarity=0.158 Sum_probs=168.4
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc-hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCcCe
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV-RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 133 (350)
...++......| |+|++|.|-+-++ .+|.-.|+|++...- .+..++..+|+.+..+- ..|.+|+++|........+
T Consensus 43 V~ad~L~~i~el-GrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 43 VPADDLVGIEEL-GRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred cchhhhhhhhhh-cCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 334444555667 9999999999998 677788999987653 35567788899877665 6999999999998888999
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+.||.|+ .||..+........ ..+++...-+|+..+..||.|||+ ...++|||+||+||||+.+|++|++|||.+-
T Consensus 122 IcME~M~-tSldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 122 ICMELMD-TSLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EeHHHhh-hhHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 9999995 57776654433222 678999999999999999999996 6689999999999999999999999999987
Q ss_pred cCCCCCccccccccccCCCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 018816 214 SIPEGKTHIKASTAIGSLEFAAPEYLTTG----YYNEKTDVYSFGKLLLVLLTGRTIGHLSR 271 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~el~tg~~p~~~~~ 271 (350)
.+...-. .+...|...|+|||.+... .|+.+|||||||+++.||.+++.||+...
T Consensus 198 ~L~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 198 YLVDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred eehhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 6644322 2223488899999988643 58999999999999999999999998654
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=5e-31 Score=224.06 Aligned_cols=211 Identities=27% Similarity=0.376 Sum_probs=182.2
Q ss_pred ccCCCceEEEEEEEC-CCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhh
Q 018816 69 IDEIEGYILYMGFLR-DRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLAD 146 (350)
Q Consensus 69 ig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~ 146 (350)
||+|++|.||++... ++..+++|.+...... ....+.+|+..++.++|++|+++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 499999999999995 4679999998776432 35678999999999999999999999999899999999999999999
Q ss_pred hhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-CCceeEcccCCCccCCCCCcccccc
Q 018816 147 RLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-EYAAKLFDFSLSKSIPEGKTHIKAS 225 (350)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~ 225 (350)
++.... ..+++..+..++.+++.++.+|| ..+++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 986532 36889999999999999999999 899999999999999999 89999999999876644321 122
Q ss_pred ccccCCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCC
Q 018816 226 TAIGSLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGD 304 (350)
Q Consensus 226 ~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
...+...|++||.+... .++.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 23478889999999877 788999999999999998
Q ss_pred CCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 305 RSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 305 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
..+.+++..|++.+|++||++.++++.+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1467999999999999999999998753
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-33 Score=256.72 Aligned_cols=252 Identities=21% Similarity=0.214 Sum_probs=205.5
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
++|....++ |+|.||.|||+++ ..+...|+|.++-.......-+.+|+-+++..+|||||.++|.+...+.+++.|||
T Consensus 15 ddyellqrv-gsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQRV-GSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhheeee-cCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 577778888 9999999999999 66668888888766556667788999999999999999999999999999999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCC
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG 218 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 218 (350)
|.+|+|.+..+.. +++++.++...++..++||+||| +.+=+|||||-.||+++..|.+|+.|||.+..++..
T Consensus 94 cgggslQdiy~~T-----gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred cCCCcccceeeec-----ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 9999999976554 78999999999999999999999 999999999999999999999999999998766443
Q ss_pred CccccccccccCCCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCC
Q 018816 219 KTHIKASTAIGSLEFAAPEYLT---TGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYM 295 (350)
Q Consensus 219 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
- .......||+.|||||+.. .+.|...+|||++|+...|+---++|....++. .+.....+..
T Consensus 166 i--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm----------r~l~LmTkS~-- 231 (829)
T KOG0576|consen 166 I--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM----------RALFLMTKSG-- 231 (829)
T ss_pred h--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH----------HHHHHhhccC--
Confidence 2 2344556999999999774 457999999999999999999988886654431 2222222222
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 296 NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+|.-..+. ....+.+.+|+..|+..+|.+|||++.++.
T Consensus 232 -~qpp~lkDk-----~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 -FQPPTLKDK-----TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -CCCCcccCC-----ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 222111111 144567899999999999999999998765
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=231.54 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=195.0
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccc--hhhHHHHHHHHHHHHhcCCCCccceeeeeecC------C
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSV--RYASERCFNNIVFASQMNHKSILKLIGCCLEA------E 130 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 130 (350)
..|....-+ |.|.. .|-.+.+ -.+.+||+|+....- ....++..+|..++..++|+||++++.++.-. .
T Consensus 17 ~Ry~nL~p~-~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPI-GSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeccc-CCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 445555566 88888 7777777 566699999975432 24567888999999999999999999998743 3
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..|+|||+|. ++|.+.+. ..++-.....++.|++.|++||| +.+|+||||||+||++..++.+||.|||
T Consensus 95 e~y~v~e~m~-~nl~~vi~-------~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVIL-------MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hHHHHHHhhh-hHHHHHHH-------HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccch
Confidence 6799999995 78988876 24667778899999999999999 9999999999999999999999999999
Q ss_pred CCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccC---------CC----C
Q 018816 211 LSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLAT---------GG----S 277 (350)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---------~~----~ 277 (350)
+|+.-... ...+..+.|..|.|||++.+..+.+.+||||+||++.||++|...|.+....+ +. .
T Consensus 164 ~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 164 LARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred hhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHH
Confidence 99865433 23445568899999999999889999999999999999999998876432210 00 1
Q ss_pred cchHHHHHHHHHHhcC-CC-------ccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 278 NFFITDRVEKFIRSNG-YM-------NIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 278 ~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
...+...++.++.... +. ..|..+...... . ......+.+++.+||..||++|.|+.++|.
T Consensus 241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~-~-~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEG-S-KLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHhhHHHHHHhhcChHhhccchhhhCCcccccccccC-C-ccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 1112223333333221 11 011111111100 0 123456889999999999999999999986
No 399
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.9e-30 Score=228.41 Aligned_cols=131 Identities=12% Similarity=0.184 Sum_probs=109.2
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC-----C---CCccceeeeeec--
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN-----H---KSILKLIGCCLE-- 128 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~-- 128 (350)
..|...++| |-|.|++||++.+ .+.+-||+|+..... --.+..+.||++|++++ | .+||++++.|..
T Consensus 78 gRY~v~rKL-GWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKL-GWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEec-cccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 567778889 9999999999999 666677888775543 33566789999999984 3 359999999874
Q ss_pred --CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 129 --AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 129 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
+.++|+|+|++ |.+|..+|....- ..++...+.+|+.||+.||.|||..| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 55899999999 7788888865432 57999999999999999999999844 99999999999999
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=6.6e-30 Score=220.19 Aligned_cols=199 Identities=25% Similarity=0.239 Sum_probs=170.5
Q ss_pred cccccccccCCCceEEEEEEECC-CceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecC
Q 018816 62 YSMRNITIDEIEGYILYMGFLRD-RGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPA 139 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~~-~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 139 (350)
|.....| |+|++|.||++...+ +..+++|.+...... ..+.+.+|+..+.+++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i-~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKL-GEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEe-ecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 3455667 999999999999954 779999999876544 5678899999999999999999999999999999999999
Q ss_pred CCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCC
Q 018816 140 GYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGK 219 (350)
Q Consensus 140 ~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 219 (350)
++++|.+++.... ..+++.....++.+++.++.+|| +.+++|+||+|.||+++.++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 80 EGGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 9999999986542 11789999999999999999999 8899999999999999999999999999988765442
Q ss_pred ccccccccccCCCCCCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 018816 220 THIKASTAIGSLEFAAPEYL-TTGYYNEKTDVYSFGKLLLVLLTGRTIGHL 269 (350)
Q Consensus 220 ~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~tg~~p~~~ 269 (350)
.. ......++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 153 ~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11 12233477889999998 666788899999999999999999999964
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-30 Score=217.06 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=187.2
Q ss_pred cCcccccccccCCCceEEEEEEEC-CCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeee-eecCCcCeEEe
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGC-CLEAEMPALVY 136 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~~~~~lv~ 136 (350)
+.|.+.+.+ |+|.||.+-++.++ ..+.+++|-+... .....+|.+|...--.|. |.||+.-|+. |++.+...+++
T Consensus 24 d~y~I~k~l-geG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 24 DVYTINKQL-GEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhHHHHh-cccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 567777888 99999999999994 4446666666443 355688999988777775 8999998875 66777888999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeC--CCCceeEcccCCCcc
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--EEYAAKLFDFSLSKS 214 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~--~~~~~kl~Dfg~~~~ 214 (350)
||++.|+|..-+.. ..+.+....+++.|+++||.||| ++++||||||.+||||- +...+||+|||.+..
T Consensus 102 E~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred ccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 99999999988755 35778888999999999999999 99999999999999993 345799999999876
Q ss_pred CCCCCccccccccccCCCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 215 IPEGKTHIKASTAIGSLEFAAPEYLTTG-----YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
.+...... ..+-.|.+||.+... ...+.+|+|.||+++|.++||.+|+.-... .....+-+..+
T Consensus 173 ~g~tV~~~-----~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~------~d~~Y~~~~~w 241 (378)
T KOG1345|consen 173 VGTTVKYL-----EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI------MDKPYWEWEQW 241 (378)
T ss_pred cCceehhh-----hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc------cCchHHHHHHH
Confidence 65433211 145568899976542 256889999999999999999999983322 11122222233
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQ 344 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~ 344 (350)
..+.. +.+...+. .+++.+..+..+-|..+|++|=...++.+....
T Consensus 242 ~~rk~----~~~P~~F~-----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 242 LKRKN----PALPKKFN-----PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred hcccC----ccCchhhc-----ccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 33221 12222222 345678899999999999999555555444433
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=1.5e-30 Score=234.82 Aligned_cols=199 Identities=20% Similarity=0.173 Sum_probs=164.9
Q ss_pred cCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC------CCCccceeeeeecCCcC
Q 018816 60 NNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN------HKSILKLIGCCLEAEMP 132 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 132 (350)
+.|...... |+|-|++|-+|.+ ..+..||||++..... ..+.=..|+.+|++|+ --|+++++-.|...+++
T Consensus 432 ~RY~V~~~~-GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 432 SRYEVQGYT-GKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred ceeEEEecc-ccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 466666777 9999999999999 5556999999987632 2344458999999996 34799999999999999
Q ss_pred eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccCC
Q 018816 133 ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFSL 211 (350)
Q Consensus 133 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~ 211 (350)
|||+|.+ ..+|.+.|.....+ -.+....+..++.|+..||..|- .-+|+|.||||+|||++.. ..+||||||.
T Consensus 510 ClVFE~L-slNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 510 CLVFEPL-SLNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred EEEehhh-hchHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcc
Confidence 9999988 46899988653221 35778889999999999999999 8899999999999999865 6689999999
Q ss_pred CccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 018816 212 SKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLS 270 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 270 (350)
|........ +...-+..|.|||++.+-+|+...|+||+||+||||.||+..|.+.
T Consensus 584 A~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 584 ASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 987654432 1112456799999999999999999999999999999999888754
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=4.7e-30 Score=226.91 Aligned_cols=270 Identities=22% Similarity=0.240 Sum_probs=197.0
Q ss_pred HHhcCcccccccccCCCceEEEEEEE-C---CCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCc
Q 018816 57 TAINNYSMRNITIDEIEGYILYMGFL-R---DRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGCCLEAEM 131 (350)
Q Consensus 57 ~~~~~f~~~~~lig~G~~g~V~~~~~-~---~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 131 (350)
...+.|...+.| |.|.|++||++++ . ....||+|.+.... ...++.+|++.|..+. +.||+.+.+++...+.
T Consensus 33 ~~~~~~~~v~ki-geGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 33 FISNAYKVVNKI-GEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhccc-cccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 344677788888 9999999999998 3 56699999987663 3456889999999995 8999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-CceeEcccC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKLFDFS 210 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg 210 (350)
..+|+||++.....+++ ..++...+..++..+..||.++| .+|||||||||.|+|.+.. +.-.|.|||
T Consensus 110 v~ivlp~~~H~~f~~l~--------~~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLY--------RSLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eEEEecccCccCHHHHH--------hcCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEech
Confidence 99999999998888887 46789999999999999999999 9999999999999999864 667999999
Q ss_pred CCccCC-----------------C--CC---------------c--------cccccccccCCCCCCccccccC-CCCcc
Q 018816 211 LSKSIP-----------------E--GK---------------T--------HIKASTAIGSLEFAAPEYLTTG-YYNEK 247 (350)
Q Consensus 211 ~~~~~~-----------------~--~~---------------~--------~~~~~~~~gt~~y~aPE~~~~~-~~~~~ 247 (350)
+|.... . +. . ........||++|.|||++..- .-+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 986110 0 00 0 0001124599999999998764 57899
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCcccCCCCcch----HHHHHHHHHHhcC-------------------CCccC-ccccC
Q 018816 248 TDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF----ITDRVEKFIRSNG-------------------YMNID-PVIVG 303 (350)
Q Consensus 248 ~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------------------~~~~~-~~~~~ 303 (350)
+||||.|||++.+++++.||....+..+..... -...+++...-.+ ...++ ..+..
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 999999999999999999997654321100000 0001111100000 11111 11111
Q ss_pred CC-----CccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 304 DR-----SCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 304 ~~-----~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.. .....+..+..+.+|+.+|+..||.+|.|+++.|+
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00 00111234457899999999999999999999886
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=3.4e-29 Score=253.60 Aligned_cols=196 Identities=18% Similarity=0.194 Sum_probs=139.5
Q ss_pred hcCC-CCccceeeee-------ecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 018816 113 QMNH-KSILKLIGCC-------LEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQ 184 (350)
Q Consensus 113 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~ 184 (350)
.++| +||.+++++| .....+++++|++ +++|.+++.... ..+++.+++.++.||+.||.||| ++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~ 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAH---SQ 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHH---hC
Confidence 4455 5788888887 2334677888987 569999996432 46899999999999999999999 99
Q ss_pred CeEeeccccCceEeCC-------------------CCceeEcccCCCccCCCCCc--------------cccccccccCC
Q 018816 185 PVVFRNIEPWNILFQE-------------------EYAAKLFDFSLSKSIPEGKT--------------HIKASTAIGSL 231 (350)
Q Consensus 185 ~ivH~dlkp~Nill~~-------------------~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~ 231 (350)
+|+||||||+||||+. ++.+|++|||+++....... ........||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999965 34556666666653211000 00011235788
Q ss_pred CCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchH
Q 018816 232 EFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKE 311 (350)
Q Consensus 232 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
.|+|||++.+..++.++|||||||++|||++|.+|+..... ... .+.. ....+...
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----------~~~-~~~~---~~~~~~~~--------- 235 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----------TMS-SLRH---RVLPPQIL--------- 235 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----------HHH-HHHH---hhcChhhh---------
Confidence 99999999999999999999999999999998887542110 000 1110 01111110
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 312 EKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 312 ~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
........++.+||+.+|.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred hcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 11234568889999999999999999986
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=4.7e-28 Score=201.38 Aligned_cols=170 Identities=22% Similarity=0.181 Sum_probs=128.5
Q ss_pred CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcc
Q 018816 142 CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTH 221 (350)
Q Consensus 142 ~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 221 (350)
|+|.+++.... ..+++..++.++.||+.||.||| +.+ ||+|||++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVRG----RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc--
Confidence 68888886532 46999999999999999999999 666 999999999999999 99987654321
Q ss_pred ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccc
Q 018816 222 IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVI 301 (350)
Q Consensus 222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
..||+.|+|||++.+..++.++|||||||++|||++|..||..... .............. .++..
T Consensus 64 -----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~--------~~~~~~~~~~~~~~--~~~~~ 128 (176)
T smart00750 64 -----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE--------LSAILEILLNGMPA--DDPRD 128 (176)
T ss_pred -----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch--------hcHHHHHHHHHhcc--CCccc
Confidence 2489999999999999999999999999999999999999864321 11111122111111 11100
Q ss_pred cCCCCccchHHHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 302 VGDRSCFRKEEKLQ--AYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 302 ~~~~~~~~~~~~~~--~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
.. ....... .+.+++.+||..+|++|||+.++++.+..+...
T Consensus 129 ~~-----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 129 RS-----NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred cc-----cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 00 0113333 699999999999999999999999999887654
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=7.1e-26 Score=206.18 Aligned_cols=168 Identities=13% Similarity=0.054 Sum_probs=129.6
Q ss_pred HHHHhcCcccccccccCCCceEEEEEEEC--CCceEEEEEeccc-----chhhHHHHHHHHHHHHhcCCCCccceeeeee
Q 018816 55 LKTAINNYSMRNITIDEIEGYILYMGFLR--DRGPILVMKYRKS-----VRYASERCFNNIVFASQMNHKSILKLIGCCL 127 (350)
Q Consensus 55 l~~~~~~f~~~~~lig~G~~g~V~~~~~~--~~~~vaik~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 127 (350)
.....++|.....| |+|+||.||+|.+. ++..||||++... .....+.+.+|+.+|.+++|+|++..+..
T Consensus 13 ~~~~~~~Y~~~~~I-G~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~-- 89 (365)
T PRK09188 13 IPALSARFVETAVL-KRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA-- 89 (365)
T ss_pred cccccCCceEccEE-eecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence 34456789999998 99999999999883 5556799886533 12235668999999999999999853322
Q ss_pred cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeecc-ccCceEeCCCCceeE
Q 018816 128 EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI-EPWNILFQEEYAAKL 206 (350)
Q Consensus 128 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-kp~Nill~~~~~~kl 206 (350)
.+..++||||++|++|.. +. ... ...++.+++.||.||| +.+|+|||| ||+|||++.++.+||
T Consensus 90 -~~~~~LVmE~~~G~~L~~-~~--------~~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikL 153 (365)
T PRK09188 90 -TGKDGLVRGWTEGVPLHL-AR--------PHG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAV 153 (365)
T ss_pred -cCCcEEEEEccCCCCHHH-hC--------ccc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEE
Confidence 245799999999999963 21 111 1467899999999999 999999999 999999999999999
Q ss_pred cccCCCccCCCCCcccc------ccccccCCCCCCcccccc
Q 018816 207 FDFSLSKSIPEGKTHIK------ASTAIGSLEFAAPEYLTT 241 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~ 241 (350)
+|||+|+.......... -....+++.|+|||.+..
T Consensus 154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999987755432221 124457888999998864
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=5.2e-24 Score=193.88 Aligned_cols=262 Identities=16% Similarity=0.150 Sum_probs=195.2
Q ss_pred CcccccccccCCCceEEEEEEECCC--ceEEEEEecccchhhHHHHHHHHHHHHhcCC----CCccceeeee-ecCCcCe
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRDR--GPILVMKYRKSVRYASERCFNNIVFASQMNH----KSILKLIGCC-LEAEMPA 133 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~~--~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~-~~~~~~~ 133 (350)
.|.....| |+|+||.||++..... ..+|+|.-..........+..|+.++..+.. +++..+++.. ......+
T Consensus 19 ~~~i~~~i-G~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKI-GEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeec-cccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 78888998 9999999999999553 3677777655432222367889999998873 6888888888 4777889
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-----CceeEcc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-----YAAKLFD 208 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-----~~~kl~D 208 (350)
+||+.+ |.+|.++..... .+.++..+.+.++.|++.+|.+|| +.|++||||||+|+.+... ..+.|.|
T Consensus 98 iVM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred EEEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 999988 789999775443 267999999999999999999999 9999999999999999865 4689999
Q ss_pred cCCCc--cCCCCCc----cc-c-ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 018816 209 FSLSK--SIPEGKT----HI-K-ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFF 280 (350)
Q Consensus 209 fg~~~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~ 280 (350)
||+++ ....... .. . .....||..|+++....+...+.+.|+||++.++.+++.|..|+....... .
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-----~ 245 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-----L 245 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-----h
Confidence 99998 3222111 11 1 223459999999999999999999999999999999999999986543210 0
Q ss_pred HHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhc
Q 018816 281 ITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYRT 348 (350)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~~ 348 (350)
. .............. . . ...+..+.++...+-..+..++|....+...|++....
T Consensus 246 -~---~~~~~~~~~~~~~~-~----~----~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 246 -K---SKFEKDPRKLLTDR-F----G----DLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred -H---HHHHHHhhhhcccc-c----c----CCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1 11111111111111 0 0 02345667777777778999999999999998877543
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.6e-26 Score=190.67 Aligned_cols=244 Identities=17% Similarity=0.153 Sum_probs=187.6
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEeccc--chhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCch
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKS--VRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
+| .....|+.|+|+++++ .+++|.+... +.....+|..|.-.|+-+.||||+.++|.|..+.++.++..||+.|||
T Consensus 197 kl-~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 197 KL-AESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hh-ccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 45 8888999999999877 7788877543 334456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEc--ccCCCccCCCCCccc
Q 018816 145 ADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLF--DFSLSKSIPEGKTHI 222 (350)
Q Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~ 222 (350)
+..++.... -..+-.++.+++.+|+.|+.|||+. ..-|-..-|....+++|++.+++|+ |--++..
T Consensus 275 ynvlhe~t~---vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq-------- 342 (448)
T KOG0195|consen 275 YNVLHEQTS---VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-------- 342 (448)
T ss_pred HHHHhcCcc---EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee--------
Confidence 999987532 3577889999999999999999964 2234444688999999999887775 3222211
Q ss_pred cccccccCCCCCCccccccCCC---CccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYY---NEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDP 299 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
.......|.|++||.++..+- -.++|+|||.+++|||.|...||....+.+.+ .+..-.+-...+.|
T Consensus 343 -e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------mkialeglrv~ipp 412 (448)
T KOG0195|consen 343 -EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------MKIALEGLRVHIPP 412 (448)
T ss_pred -ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------hhhhhccccccCCC
Confidence 112225789999999987642 36899999999999999999999876653211 11111111222333
Q ss_pred cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 300 VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
..+..+..|+.-|+..||.+||.+..|+-.|+++.
T Consensus 413 ------------gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 ------------GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ------------CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 34566889999999999999999999999999874
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=3.2e-23 Score=187.75 Aligned_cols=262 Identities=24% Similarity=0.270 Sum_probs=198.1
Q ss_pred cccccccccCCCceEEEEEEECCCceEEEEEecccchh---hHHHHHHHHHHHHhcCCC-CccceeeeeecCCcCeEEee
Q 018816 62 YSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY---ASERCFNNIVFASQMNHK-SILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e 137 (350)
|.....| |.|+||.||++.+. ..+++|.+...... ....+.+|+.++..+.|+ +|+++.+.+......+++++
T Consensus 2 ~~~~~~l-~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKL-GEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEee-cCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 4555677 99999999999998 58899998765432 367799999999999988 79999999977777899999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 216 (350)
++.++++.+++...... ..+.......+..|++.++.|+| ..+++|||+||+||+++..+ .++++|||.+....
T Consensus 79 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred cCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 99999999776543211 26889999999999999999999 89999999999999999998 79999999988554
Q ss_pred CCCccc----cccccccCCCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 217 EGKTHI----KASTAIGSLEFAAPEYLTT---GYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 217 ~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
...... ......|+..|++||.+.+ ..++...|+||+|++++++++|..|+...... .........+
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~------~~~~~~~~~~ 227 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS------SATSQTLKII 227 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc------ccHHHHHHHH
Confidence 433221 2355669999999999987 57899999999999999999999996543210 1112222222
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKK 341 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~ 341 (350)
................. ......+.+++..|+..+|..|.++.+....
T Consensus 228 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 228 LELPTPSLASPLSPSNP----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HhcCCcccccccCcccc----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 22221101111100000 1234578899999999999999998876653
No 410
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-25 Score=217.10 Aligned_cols=247 Identities=18% Similarity=0.127 Sum_probs=184.4
Q ss_pred CcccccccccCCCceEEEEEEECCCceEEEEEecccch-hhHHHHH---HHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVR-YASERCF---NNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~-~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
++...+.| |++.|=.|.+++++.| .|+||.+.+..+ .+.+.+. .|++ ...++|||.+.+.-+...+...|+|-
T Consensus 24 e~~~~~~L-GstRFlKv~r~k~~eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENL-GSTRFLKVARAKDREG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeeccc-CchhhhhhhhccCCCc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 67777888 9999999999999988 799999876653 3344444 4444 45568999999998888888889999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
+|. ..+|.|.+..+ .-+...+..-|+.|++.||..+| ..||+|+|||.+||||.+-+.+.|+||...+...
T Consensus 101 qyv-khnLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY 171 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTY 171 (1431)
T ss_pred HHH-hhhhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCcc
Confidence 998 56999998654 34667778889999999999999 9999999999999999999999999999876543
Q ss_pred CCCcccc-----ccccccCCCCCCccccccC----------C-CCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcc
Q 018816 217 EGKTHIK-----ASTAIGSLEFAAPEYLTTG----------Y-YNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNF 279 (350)
Q Consensus 217 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~ 279 (350)
-+..... -.+...-.+|+|||.+... . .+++-||||+||+++||++ |++||..+.
T Consensus 172 LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ-------- 243 (1431)
T KOG1240|consen 172 LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ-------- 243 (1431)
T ss_pred CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH--------
Confidence 2222111 1122245689999988541 2 5788999999999999988 677776332
Q ss_pred hHHHHHHHHHHhcCCCccCc--cccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 280 FITDRVEKFIRSNGYMNIDP--VIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
++.-......++ .+.+ -....+++|+..|++.||+.|.++++.|+.-+
T Consensus 244 --------L~aYr~~~~~~~e~~Le~--------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 244 --------LLAYRSGNADDPEQLLEK--------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred --------HHhHhccCccCHHHHHHh--------CcCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 111111111111 0100 11236889999999999999999999998744
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=5.3e-25 Score=213.05 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=188.2
Q ss_pred ccccccCCCceEEEEEEE-CCCceEEEEEec----ccch--hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 65 RNITIDEIEGYILYMGFL-RDRGPILVMKYR----KSVR--YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~-~~~~~vaik~~~----~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
..++ |.|++|.|+.... ......+.|.+. .... .....+..|+-+-..+.|||++..+..+.+.....-+||
T Consensus 323 ~~~~-g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 323 GRVL-GSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccee-eecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3455 9999998888777 444445555443 1111 111225677778888999999998888877766666699
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
||++ +|..++... ..++...+-.++.|++.|+.||| ..||.|||+|++|+++..+|.+||+|||.+..+..
T Consensus 402 ~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred cccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 9999 999998654 36888889999999999999999 99999999999999999999999999999876654
Q ss_pred CCcc--ccccccccCCCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCC
Q 018816 218 GKTH--IKASTAIGSLEFAAPEYLTTGYYN-EKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGY 294 (350)
Q Consensus 218 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (350)
+... ......+|+..|+|||++.+..|. ...||||.|+++..|.+|+.||......... + ........
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~---~------~~~~~~~~ 543 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS---F------KTNNYSDQ 543 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc---h------hhhccccc
Confidence 4332 334556699999999999998886 5689999999999999999998755432110 0 00000000
Q ss_pred CccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHh
Q 018816 295 MNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK--KLRQM 345 (350)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~--~L~~~ 345 (350)
.. ....... .-...+.....++..||+.+|.+|.|+++|++ +++.+
T Consensus 544 ~~----~~~~~~~-~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 544 RN----IFEGPNR-LLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred cc----cccChHH-HHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 00 0000000 11366778899999999999999999999986 44443
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2e-24 Score=178.41 Aligned_cols=262 Identities=15% Similarity=0.122 Sum_probs=197.8
Q ss_pred hcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCC-CCccceeeeeecCCcCeEEe
Q 018816 59 INNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNH-KSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 136 (350)
.+.|...+.| |+|+||.+|.|.. .++..||||.-.... ....+.-|.++...|++ ..|..+..+..+...-.+||
T Consensus 14 ~gky~lvrki-GsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKI-GSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ccceEEEEee-cCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 4678888888 9999999999999 888899999865542 23457789999999985 67888888888889999999
Q ss_pred ecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC---CCceeEcccCCCc
Q 018816 137 EPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE---EYAAKLFDFSLSK 213 (350)
Q Consensus 137 e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~ 213 (350)
+.+ |.||++++.-.. ..++..+++-++.|++.-++|+| .++++||||||+|+|..- ...+.++|||+|+
T Consensus 91 dLL-GPsLEdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS----RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred ecc-CccHHHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchh
Confidence 998 789999875432 57899999999999999999999 999999999999999964 3568999999998
Q ss_pred cCCCCCcc-----ccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 018816 214 SIPEGKTH-----IKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKF 288 (350)
Q Consensus 214 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (350)
......+. .......||.+|.+--...+..-+...|+=|+|.++.++--|..||...... .-.....+.
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~------tk~QKyEkI 236 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA------TKKQKYEKI 236 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh------hHHHHHHHH
Confidence 77544322 1233456899999887776677788999999999999999999999865432 111122222
Q ss_pred HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 289 IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
.+......+.. .+...+.++.-.+.-|-..--++-|.-.-+-+.++-+.
T Consensus 237 ~EkK~s~~ie~---------LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 237 SEKKMSTPIEV---------LCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred HHhhcCCCHHH---------HhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 22111111111 11234567888888888888888888776666555443
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1e-22 Score=175.53 Aligned_cols=263 Identities=13% Similarity=0.130 Sum_probs=197.8
Q ss_pred HhcCcccccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEE
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 135 (350)
..-+|.....| |.|.||.++.|+. -++.+||||.-... ....++..|....+.|. .++|..++.+-.++-+-.||
T Consensus 26 VG~hyrVGkKI-GeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 26 VGPHYRVGKKI-GEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ecccceecccc-ccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 34578999998 9999999999998 56669999885333 22445777888888874 69999999998888899999
Q ss_pred eecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC-----CceeEcccC
Q 018816 136 YEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE-----YAAKLFDFS 210 (350)
Q Consensus 136 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~-----~~~kl~Dfg 210 (350)
+|.+ |.||+|+..-.. ..++..++..+|.|++.-++|+| .+.+|.|||||+|+||... ..+-++|||
T Consensus 103 idLL-GPSLEDLFD~Cg----R~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG----RRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred hhhh-CcCHHHHHHHhc----CcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEecc
Confidence 9998 789988774322 57999999999999999999999 9999999999999999753 457999999
Q ss_pred CCccCCCCCccc-----cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH
Q 018816 211 LSKSIPEGKTHI-----KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 211 ~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
+|+......+.. ......||.+||+-....+..-+...|+=|||-++++.+-|..||....-.. .....
T Consensus 175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t------nK~kY 248 (449)
T KOG1165|consen 175 MAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT------NKEKY 248 (449)
T ss_pred chhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc------hHHHH
Confidence 999886654322 2345569999999998888889999999999999999999999998764321 11111
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMY 346 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~ 346 (350)
.+.-.......+.. .++.++.++..-+.-.-..+-.+-|.-+-+..-+.+++
T Consensus 249 eKIGe~Kr~T~i~~---------Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 249 EKIGETKRSTPIEV---------LCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred HHhccccccCCHHH---------HHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11111111111111 12245567777777777777778888776666665554
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=3.1e-23 Score=173.91 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=107.4
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchh--h-------H-----------------HHHHHHHHHHHhcCCCCc
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY--A-------S-----------------ERCFNNIVFASQMNHKSI 119 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~ni 119 (350)
..| |+|++|.||+|...++..||+|.+...... . . ....+|+.++.++.++++
T Consensus 3 ~~i-g~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCI-STGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred Ccc-ccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 345 999999999999987889999998764211 0 0 122359999999988777
Q ss_pred cceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HccCCCCeEeeccccCceEe
Q 018816 120 LKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYL-RFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 120 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dlkp~Nill 198 (350)
.....+.. ...++||||++++++....... ..++......++.|++.+|.++ | ..+|+||||||+|||+
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEE
Confidence 44333222 2348999999987776543222 4688999999999999999999 7 8899999999999999
Q ss_pred CCCCceeEcccCCCccC
Q 018816 199 QEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~~ 215 (350)
+ ++.++|+|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999998754
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.7e-23 Score=177.81 Aligned_cols=170 Identities=15% Similarity=0.136 Sum_probs=132.0
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHH---H------HHHHHHHHHhcCCCCccceeeeeecC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASE---R------CFNNIVFASQMNHKSILKLIGCCLEA 129 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~~~~~~~~~ 129 (350)
.++|...+++ |.|+||.||+... +++.+|+|.+.+....... . +.+|+..+.+++||+|..+.+++...
T Consensus 30 ~~~y~~~~~l-~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVF-RNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEe-cCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 5789999999 9999999999666 4558999999765432222 2 57899999999999999999886643
Q ss_pred --------CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 130 --------EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 130 --------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
...++||||++|.+|.++.. ++. ....+++.++..+| ..|++|+|++|+||+++.+
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKN 171 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCC
Confidence 35789999999999988631 222 34669999999999 9999999999999999998
Q ss_pred CceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHH
Q 018816 202 YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLL 261 (350)
Q Consensus 202 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 261 (350)
+ ++|+|||........... ..++....|..++|+||||+++..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999987654321111 01333445678999999999877544
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-22 Score=187.64 Aligned_cols=218 Identities=22% Similarity=0.311 Sum_probs=166.3
Q ss_pred HHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCe-Eee
Q 018816 111 ASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPV-VFR 189 (350)
Q Consensus 111 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~ 189 (350)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.... ..+++.-...+.++|+.||.||| ..+| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~----~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED----IKLDYFFILSFIRDISKGLAYLH---NSPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc----cCccHHHHHHHHHHHHHHHHHHh---cCcceeee
Confidence 357899999999999999999999999999999999997633 56888889999999999999999 4444 999
Q ss_pred ccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccC---C----CCccchhHHHHHHHHHHHh
Q 018816 190 NIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG---Y----YNEKTDVYSFGKLLLVLLT 262 (350)
Q Consensus 190 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~----~~~~~DiwslG~il~el~t 262 (350)
.+++.|+++|....+|++|||+.................-..-|.|||.+... . .+.+.|+||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 99999999999999999999998766431111111111134568999998763 1 4678999999999999999
Q ss_pred CCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 018816 263 GRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKL 342 (350)
Q Consensus 263 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L 342 (350)
...||+....... . ......+.+.....+.|.+.... +..+.+..++.+||..+|++||++..|-..+
T Consensus 154 r~~~~~~~~~~~~--~----~eii~~~~~~~~~~~rP~i~~~~------e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~ 221 (484)
T KOG1023|consen 154 RSGPFDLRNLVED--P----DEIILRVKKGGSNPFRPSIELLN------ELPPELLLLVARCWEEIPEKRPSIEQIRSKL 221 (484)
T ss_pred ccCccccccccCC--h----HHHHHHHHhcCCCCcCcchhhhh------hcchHHHHHHHHhcccChhhCccHHHHHhhh
Confidence 9999986543211 1 22222233333444444443221 3344789999999999999999999999988
Q ss_pred HHhhh
Q 018816 343 RQMYR 347 (350)
Q Consensus 343 ~~~~~ 347 (350)
+.+..
T Consensus 222 ~~~~~ 226 (484)
T KOG1023|consen 222 LTINK 226 (484)
T ss_pred hhhcc
Confidence 87754
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=5.1e-22 Score=167.02 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=110.1
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchh--------------------------hHHHHHHHHHHHHhcCCCCc
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY--------------------------ASERCFNNIVFASQMNHKSI 119 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 119 (350)
..| |+|++|.||+|.+.++..||||.+...... ....+.+|...+.++.|+++
T Consensus 3 ~~i-g~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 3 GCI-STGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred cee-ecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345 999999999999887889999998765211 01223578999999999987
Q ss_pred cceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceEe
Q 018816 120 LKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNILF 198 (350)
Q Consensus 120 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nill 198 (350)
.....+... ..++||||++++++....... ..++......++.+++.++.++| . .||+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEE
Confidence 554444333 248999999988654432221 35778889999999999999999 7 999999999999999
Q ss_pred CCCCceeEcccCCCccCCC
Q 018816 199 QEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~~~~ 217 (350)
+ ++.++|+|||++.....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999986543
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.9e-21 Score=159.99 Aligned_cols=187 Identities=11% Similarity=-0.017 Sum_probs=138.8
Q ss_pred ccccccccCCCceEEEEEEECCCceEEEEEecccchh----hHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEee
Q 018816 63 SMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY----ASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 137 (350)
.....| ++|+||+||.+.. ++..++.+.+...... ....+.+|+.+|++|+ |++|++++++ +..+++||
T Consensus 5 ~~~~~l-~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPL-KSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceee-cCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 344567 9999999997776 4458888777655331 1235789999999995 5889999886 34699999
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeecc-ccCceEeCCCCceeEcccCCCccCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNI-EPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-kp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
|++|.+|...+.. ....++.+++.+|.++| ..||+|||| ||+|||++.++.++|+|||++....
T Consensus 79 yI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 79 YLAGAAMYQRPPR------------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eecCccHHhhhhh------------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 9999888654311 11357889999999999 999999999 7999999999999999999998655
Q ss_pred CCCcc----c-c------ccccccCCCCCCccccccC-CCC-ccchhHHHHHHHHHHHhCCCCCCCC
Q 018816 217 EGKTH----I-K------ASTAIGSLEFAAPEYLTTG-YYN-EKTDVYSFGKLLLVLLTGRTIGHLS 270 (350)
Q Consensus 217 ~~~~~----~-~------~~~~~gt~~y~aPE~~~~~-~~~-~~~DiwslG~il~el~tg~~p~~~~ 270 (350)
..... . . ......++.|++|+.-.-. ..+ ...+.++-|+-+|.++|+..+.-..
T Consensus 144 ~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 144 PRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 43311 0 0 1112257778888744332 334 5678889999999999999876543
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.86 E-value=3.5e-21 Score=163.02 Aligned_cols=136 Identities=12% Similarity=0.026 Sum_probs=105.7
Q ss_pred ccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhc-----CCCCccceeeeeecCC---c-Ce
Q 018816 63 SMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQM-----NHKSILKLIGCCLEAE---M-PA 133 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~---~-~~ 133 (350)
+....| |+|+||.||. +......+||++........+.+.+|+.+++.+ +||||++++|++.++. . ..
T Consensus 5 ~~~~~L-G~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPL-GTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCccee-cCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 344566 9999999996 533335579988765444567799999999999 5799999999998874 3 33
Q ss_pred EEeec--CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHccCCCCeEeeccccCceEeCC----CCceeE
Q 018816 134 LVYEP--AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAV-AYLRFGFPQPVVFRNIEPWNILFQE----EYAAKL 206 (350)
Q Consensus 134 lv~e~--~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlkp~Nill~~----~~~~kl 206 (350)
+|+|| +++++|.+++... .+++. ..++.+++.++ .||| +++|+||||||+|||++. ++.++|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 5579999999542 34444 35678888777 9999 999999999999999974 347999
Q ss_pred cccCCC
Q 018816 207 FDFSLS 212 (350)
Q Consensus 207 ~Dfg~~ 212 (350)
+||+.+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995433
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.9e-22 Score=187.51 Aligned_cols=223 Identities=19% Similarity=0.105 Sum_probs=177.2
Q ss_pred cCCCceEEEEEEE----CCCceEEEEEecccchh--hHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEeecCCCC
Q 018816 70 DEIEGYILYMGFL----RDRGPILVMKYRKSVRY--ASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 70 g~G~~g~V~~~~~----~~~~~vaik~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
|+|+||.|+++.. +.+..+|.|...+.+.. .......|..++...+ ||.+|++...++.+...+++++|..+|
T Consensus 3 g~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg 82 (612)
T KOG0603|consen 3 GQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGG 82 (612)
T ss_pred CcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccc
Confidence 9999999998765 44557777777654321 1124556788888886 999999999999999999999999999
Q ss_pred chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc
Q 018816 143 TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI 222 (350)
Q Consensus 143 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 222 (350)
.|...+... ..+.......+...++.+++++| +.+++|||+|++||+++.+|++++.|||+++..-....
T Consensus 83 ~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 83 DLFTRLSKE-----VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred hhhhccccC-----CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 998887654 46778888889999999999999 99999999999999999999999999999987643322
Q ss_pred cccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCcccc
Q 018816 223 KASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIV 302 (350)
Q Consensus 223 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
.+||..|||||++. ....++|.||||++++||+||..||.. +.+..... .. ..
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------------~~~~~Il~-~~--~~----- 205 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------------DTMKRILK-AE--LE----- 205 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------------HHHHHHhh-hc--cC-----
Confidence 16999999999987 567899999999999999999999874 11111111 00 00
Q ss_pred CCCCccchHHHHHHHHHHHHHccccCCCCCCCH
Q 018816 303 GDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTM 335 (350)
Q Consensus 303 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 335 (350)
.+......+.+++.+++..+|..|.-.
T Consensus 206 ------~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 ------MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ------CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 113667778899999999999998644
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=1.1e-20 Score=165.39 Aligned_cols=233 Identities=20% Similarity=0.137 Sum_probs=146.7
Q ss_pred cccccccccCCCceEEEEEEE-CCCceEEEEEecccch---hhHHHHHHHHHHHHhcCC----------CCccceeeeee
Q 018816 62 YSMRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVR---YASERCFNNIVFASQMNH----------KSILKLIGCCL 127 (350)
Q Consensus 62 f~~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~ 127 (350)
......| |.|+++.||.+++ ..+..+|+|.+..... ...+.+.+|.-....+.+ -.++-.++...
T Consensus 14 l~~~~~i-~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 14 LVRGRII-GKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEE-EEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEcccc-ccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3445667 9999999999999 5677999999754432 334556666544444322 12222222221
Q ss_pred ---------cCC--------cCeEEeecCCCCchhhhhh---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeE
Q 018816 128 ---------EAE--------MPALVYEPAGYCTLADRLY---GPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVV 187 (350)
Q Consensus 128 ---------~~~--------~~~lv~e~~~~~sL~~~l~---~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 187 (350)
... +.+++|+-+ .++|.+++. ..... ...+....++.+..|+++.+++|| ..|++
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlV 167 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLH---SYGLV 167 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHh---hcceE
Confidence 111 336677776 578887753 22111 123455566778899999999999 99999
Q ss_pred eeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccC--------CCCccchhHHHHHHHHH
Q 018816 188 FRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTG--------YYNEKTDVYSFGKLLLV 259 (350)
Q Consensus 188 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DiwslG~il~e 259 (350)
|+||+|+|++++.+|.+.|+||+.....+..... ...+..|.+||..... .++.+.|.|+||+++|.
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 9999999999999999999999876654332211 2245779999976442 47899999999999999
Q ss_pred HHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCC
Q 018816 260 LLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDR 332 (350)
Q Consensus 260 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 332 (350)
|++|..||........... .+. .| .+.++.+..||..+|+.||++|
T Consensus 243 lWC~~lPf~~~~~~~~~~~---------------------~f~---~C---~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW---------------------DFS---RC---RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG---------------------GGT---TS---S---HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCccccccc---------------------cch---hc---CCcCHHHHHHHHHHccCCcccC
Confidence 9999999986544211110 111 11 1667889999999999999988
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.3e-20 Score=186.60 Aligned_cols=254 Identities=13% Similarity=0.131 Sum_probs=182.8
Q ss_pred HHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcC---CCCccceeeeeecCC
Q 018816 54 DLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMN---HKSILKLIGCCLEAE 130 (350)
Q Consensus 54 ~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 130 (350)
+++.....|.+...+ |+|+||.||+|...++..||+|.-.+..... |.--.+++.+|+ -+.|..+...+.-.+
T Consensus 692 ~~~~~~~~~~I~~e~-G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEI-GEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeee-ccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 344455678888888 9999999999999878899999876654321 222233444444 345566666666677
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-------CCc
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-------EYA 203 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-------~~~ 203 (350)
..+||+||.+.|+|.+++... +.+++..++.++.|++..+++|| ..+|||+||||+|+||.. +..
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~-----~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred cceeeeeccccccHHHhhccC-----CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccc
Confidence 889999999999999999633 67999999999999999999999 999999999999999943 456
Q ss_pred eeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 204 AKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 204 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
++|+|||.+..+..-.....-...++|-.+-.+|...+.+++-..|.|.|+-+++-|+.|+..=
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q---------------- 903 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME---------------- 903 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH----------------
Confidence 8999999986553322222334455788899999999999999999999999999999998631
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLRQMYR 347 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~~~~~ 347 (350)
..++....++..+... -.-+.+.+++..+|..|-..=|...++...|++.+.
T Consensus 904 -----~~~g~~~~~~~~~~Ry-------~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 904 -----VKNGSSWMVKTNFPRY-------WKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred -----hcCCcceeccccchhh-------hhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 1111111111111000 112235566666666555555777777777777654
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=1.2e-19 Score=157.38 Aligned_cols=143 Identities=13% Similarity=0.038 Sum_probs=110.5
Q ss_pred hcCcccccccccCCCceEEEEEE--ECCCceEEEEEecccchh------------------------hHHHHHHHHHHHH
Q 018816 59 INNYSMRNITIDEIEGYILYMGF--LRDRGPILVMKYRKSVRY------------------------ASERCFNNIVFAS 112 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~--~~~~~~vaik~~~~~~~~------------------------~~~~~~~E~~~l~ 112 (350)
.-.|...+.| |+|++|.||+|. ..++..||+|.+...... ....+.+|+.++.
T Consensus 27 ~~~~~i~~~L-g~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 27 GILSAIGGCI-STGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred CchHHhCCee-ccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 3357777888 999999999999 367889999998654210 1123568999999
Q ss_pred hcCCCC--ccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC-eEee
Q 018816 113 QMNHKS--ILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQP-VVFR 189 (350)
Q Consensus 113 ~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~ 189 (350)
++.+.+ +..++++ ...++||||+++.+|....... ..+.......++.|++.++.+|| ..+ ++|+
T Consensus 106 ~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~ 173 (237)
T smart00090 106 RLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLY---KEGELVHG 173 (237)
T ss_pred HHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeC
Confidence 997532 3444442 2358999999998887654222 34556667899999999999999 999 9999
Q ss_pred ccccCceEeCCCCceeEcccCCCccC
Q 018816 190 NIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 190 dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
||||+||+++ ++.++|+|||.+...
T Consensus 174 Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 174 DLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999 889999999988754
No 424
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=8e-20 Score=161.26 Aligned_cols=195 Identities=17% Similarity=0.137 Sum_probs=138.4
Q ss_pred CCCCccceeeeeecC---------------------------CcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHH
Q 018816 115 NHKSILKLIGCCLEA---------------------------EMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKV 167 (350)
Q Consensus 115 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i 167 (350)
+|||||++.++|.+. ..+|+||--.+ .+|.+++.. ...+.....-+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~------~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT------RHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc------CCCchHHHHHH
Confidence 599999999987652 25688988774 699999865 35677788889
Q ss_pred HHHHHHHHHHHHccCCCCeEeeccccCceEeC--CC--CceeEcccCCCccCCCC---Cccc-cccccccCCCCCCcccc
Q 018816 168 AMETANAVAYLRFGFPQPVVFRNIEPWNILFQ--EE--YAAKLFDFSLSKSIPEG---KTHI-KASTAIGSLEFAAPEYL 239 (350)
Q Consensus 168 ~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~--~~--~~~kl~Dfg~~~~~~~~---~~~~-~~~~~~gt~~y~aPE~~ 239 (350)
+.|++.|+.||| .++|.|||+|.+|||+. .+ ..+.|+|||++-.-..- .... -.....|....||||+.
T Consensus 347 laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 999999999999 99999999999999994 33 35689999987433221 0111 11223377889999988
Q ss_pred ccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHH
Q 018816 240 TTGY------YNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEK 313 (350)
Q Consensus 240 ~~~~------~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (350)
...+ --.++|.|+.|.+.||+++...||+..... ...... +.+... |. .++.+
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem----~L~~r~-----Yqe~qL----Pa--------lp~~v 482 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM----LLDTRT-----YQESQL----PA--------LPSRV 482 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh----eechhh-----hhhhhC----CC--------CcccC
Confidence 7532 126899999999999999999999853211 111111 111111 11 11356
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 314 LQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 314 ~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+..+.+|+...|+.||++|++..=...
T Consensus 483 pp~~rqlV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 483 PPVARQLVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred ChHHHHHHHHHhcCCccccCCccHHHh
Confidence 678899999999999999998654333
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=2.2e-19 Score=153.66 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=112.1
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccch--------hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeec
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVR--------YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 138 (350)
.| |+|++|.||+|...+ ..|++|....... .....+.+|+.++..++|++|.....++.+....+++|||
T Consensus 3 ~l-~~G~~~~vy~~~~~~-~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 3 LI-KRGAEAEIYLGDFLG-IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cc-ccCceEEEEEEeeCC-CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 45 999999999999844 4899998654321 1234577899999999999998888887778889999999
Q ss_pred CCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 139 AGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 139 ~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
++|++|.+++... .. ....++.+++.+|.+|| +.+++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN--------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988532 12 78899999999999999 99999999999999999 78899999998764
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=2.4e-20 Score=170.45 Aligned_cols=175 Identities=27% Similarity=0.323 Sum_probs=133.3
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
.+++.|++|...+|.+|+.+.... ...++...+.++.|++.|+.| ++.+|+|+||.||+...+..+||+|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~--e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG--EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc--cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 588999999999999999754322 467888999999999999998 689999999999999999999999999
Q ss_pred CCccCCCCC----ccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 018816 211 LSKSIPEGK----THIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLT-GRTIGHLSRLATGGSNFFITDRV 285 (350)
Q Consensus 211 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 285 (350)
+........ .....+..+||..||+||.+.+..|+.++||||||++++||+. -...+..
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------------- 465 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------------- 465 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----------------
Confidence 987665444 2223455669999999999999999999999999999999998 3332221
Q ss_pred HHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 018816 286 EKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDV 338 (350)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev 338 (350)
...........++|....+. +.-..|+.++++..|.+||++.++
T Consensus 466 ~~t~~d~r~g~ip~~~~~d~---------p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 466 IATLTDIRDGIIPPEFLQDY---------PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHhhhhhhcCCCChHHhhcC---------cHHHHHHHHhcCCCcccCchHHHH
Confidence 11111112333333332222 234589999999999999955443
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.80 E-value=3.9e-19 Score=150.68 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=106.7
Q ss_pred ccCCCceEEEEEEECCCceEEEEEecccch--------hhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 69 IDEIEGYILYMGFLRDRGPILVMKYRKSVR--------YASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 69 ig~G~~g~V~~~~~~~~~~vaik~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
||+|++|.||+|.+.+ ..|++|....... ...+++.+|+.++..++|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~~~-~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLG-LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeecCC-ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 4999999999999654 5899998654211 123567799999999998877666666666777899999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
|++|.+.+... .. .++.+++.+|.+|| +.+++|+|++|.||+++ ++.++++|||++...
T Consensus 81 g~~l~~~~~~~-----~~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEG-----ND-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhc-----HH-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999887432 11 78999999999999 99999999999999999 889999999988653
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.79 E-value=6.5e-19 Score=170.94 Aligned_cols=137 Identities=17% Similarity=0.132 Sum_probs=112.1
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEeccc-c-------hhhHHHHHHHHHHHHhcCCCCccceeeeeecCC
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKS-V-------RYASERCFNNIVFASQMNHKSILKLIGCCLEAE 130 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~-~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 130 (350)
...|...+.| |+|+||.||+|.+.+. .+++|+.... . ....+++.+|+.++..++|++++....++.+..
T Consensus 332 ~~~~~~~~~i-G~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLI-GKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCcccee-ccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3445566777 9999999999998665 4454443221 1 112356889999999999999998888887777
Q ss_pred cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccC
Q 018816 131 MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFS 210 (350)
Q Consensus 131 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg 210 (350)
..++||||+++++|.+++. ....++.+++.+|.+|| +.+++||||||+|||+ .++.++|+|||
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFG 472 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFG 472 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCc
Confidence 8899999999999998873 34678999999999999 9999999999999999 67889999999
Q ss_pred CCcc
Q 018816 211 LSKS 214 (350)
Q Consensus 211 ~~~~ 214 (350)
+++.
T Consensus 473 la~~ 476 (535)
T PRK09605 473 LGKY 476 (535)
T ss_pred cccc
Confidence 9875
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=1.5e-18 Score=146.97 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=111.7
Q ss_pred HHHHHHhcCcccccccccCCCceEEEEEEECCCceEEEEEecccch----------------------hhHHHHHHHHHH
Q 018816 53 EDLKTAINNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVR----------------------YASERCFNNIVF 110 (350)
Q Consensus 53 ~~l~~~~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~----------------------~~~~~~~~E~~~ 110 (350)
.++......|...+.| |+|+||.||++...++..||||.+..... .....+.+|..+
T Consensus 8 ~~~~~~~~~~~~~~~i-~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 86 (198)
T cd05144 8 HTLVKRGVVESLGNQI-GVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAA 86 (198)
T ss_pred HHHHHcCchhhcCCcc-ccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHH
Confidence 4444444446667777 99999999999998888999998754321 011235678899
Q ss_pred HHhcCCCC--ccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEe
Q 018816 111 ASQMNHKS--ILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVF 188 (350)
Q Consensus 111 l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 188 (350)
+..+.|++ ++..++ ....++||||+++++|...... .....++.+++.++.++| ..+++|
T Consensus 87 l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh---~~gi~H 148 (198)
T cd05144 87 LKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY---KHGIIH 148 (198)
T ss_pred HHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH---HCCCCc
Confidence 99998774 444443 2456899999999998765320 234678899999999999 899999
Q ss_pred eccccCceEeCCCCceeEcccCCCccCCC
Q 018816 189 RNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 189 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
+||+|+||+++.++.++|+|||.+.....
T Consensus 149 ~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 149 GDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999999865543
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.78 E-value=2.6e-19 Score=174.76 Aligned_cols=208 Identities=20% Similarity=0.205 Sum_probs=143.0
Q ss_pred hcCcccccccccCCCceEEEEEEEC-CCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEee
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLR-DRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYE 137 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~-~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 137 (350)
-.+|+..+.+ ..|+||.||.++++ ..+++|+ ++++..- +.+. ++.....|.+|
T Consensus 82 e~df~~Ikli-sngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLI-SNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred ccccceeEee-ccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCccee-----------------
Confidence 3688888888 99999999999995 4447777 6655421 1111 22222223222
Q ss_pred cCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 138 PAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 138 ~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
|+=...+... ++++... +.+++||| +.+|+|||+||+|.+|..-|++|++|||+++....
T Consensus 136 ----gDc~tllk~~-----g~lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ----GDCATLLKNI-----GPLPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ----chhhhhcccC-----CCCcchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 2222222211 3444332 78999999 99999999999999999999999999999875532
Q ss_pred CCc-------------cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 018816 218 GKT-------------HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDR 284 (350)
Q Consensus 218 ~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 284 (350)
... .......+||+.|.|||++....|...+|+|++|+|+||.+-|..||+...+. ..
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe---------el 266 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---------EL 266 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH---------HH
Confidence 211 11233457999999999999999999999999999999999999999865331 11
Q ss_pred HHHHHHhcC-CCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCC
Q 018816 285 VEKFIRSNG-YMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRP 333 (350)
Q Consensus 285 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 333 (350)
+..++.... ...-| +..+.+..+++.+.|+.+|..|-
T Consensus 267 fg~visd~i~wpE~d------------ea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 267 FGQVISDDIEWPEED------------EALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred HhhhhhhhccccccC------------cCCCHHHHHHHHHHHHhChHhhc
Confidence 111221111 11101 14456889999999999999994
No 431
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=1e-16 Score=139.18 Aligned_cols=135 Identities=14% Similarity=0.129 Sum_probs=104.7
Q ss_pred ccccc-CCCceEEEEEEECCCceEEEEEecccc-------------hhhHHHHHHHHHHHHhcCCCCc--cceeeeeecC
Q 018816 66 NITID-EIEGYILYMGFLRDRGPILVMKYRKSV-------------RYASERCFNNIVFASQMNHKSI--LKLIGCCLEA 129 (350)
Q Consensus 66 ~~lig-~G~~g~V~~~~~~~~~~vaik~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 129 (350)
.+| | .||.|+||.+...++ .+++|.+.... ......+.+|+.++.+|+|++| +..+++....
T Consensus 37 ~~l-g~~~g~gtv~~v~~~~~-~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVV-GSAKGRGTTWFVQTPGV-NWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred cee-ecCCCCccEEEEEeCCc-eEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 345 8 899999999988754 89999885321 1223567889999999998775 6777765433
Q ss_pred C----cCeEEeecCCC-CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCce
Q 018816 130 E----MPALVYEPAGY-CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAA 204 (350)
Q Consensus 130 ~----~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~ 204 (350)
. ..++|||++++ .+|.+++.. .+++.. .+.+++.+|.+|| +.||+|+||||+|||++.++.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~------~~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE------APLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc------CCCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCE
Confidence 2 23599999997 689888754 234433 3678999999999 9999999999999999999999
Q ss_pred eEcccCCCccC
Q 018816 205 KLFDFSLSKSI 215 (350)
Q Consensus 205 kl~Dfg~~~~~ 215 (350)
+|+|||.+...
T Consensus 182 ~LIDfg~~~~~ 192 (239)
T PRK01723 182 WLIDFDRGELR 192 (239)
T ss_pred EEEECCCcccC
Confidence 99999988653
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.71 E-value=1.7e-16 Score=127.80 Aligned_cols=133 Identities=12% Similarity=0.048 Sum_probs=111.8
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCC--CCccceeeeeecCCcCeEEeecCCCCc
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNH--KSILKLIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~s 143 (350)
+.+ |+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++++++++....+..+++|||++++.
T Consensus 4 ~~i-~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 4 KLL-KGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred eec-ccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 456 999999999999966 5899999866533 4678899999999976 589999998888888999999998876
Q ss_pred hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 144 LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 144 L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
+..+ +......++.+++.++.+||.....+++|+|++|.||+++..+.++++|||.+..
T Consensus 80 ~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6532 4566678899999999999944335799999999999999999999999998764
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=9.6e-17 Score=134.62 Aligned_cols=134 Identities=17% Similarity=0.155 Sum_probs=96.6
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchh--hHHH----------------------HHHHHHHHHhcCCCC--c
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRY--ASER----------------------CFNNIVFASQMNHKS--I 119 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i 119 (350)
+.| |+|+||.||+|.+.++..||||.+...... .... ...|...+.++.+.. +
T Consensus 3 ~~l-g~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 3 GPI-GTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred ccc-ccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 456 999999999999987789999998654221 1111 134566666664332 4
Q ss_pred cceeeeeecCCcCeEEeecCCCCchhhh-hhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEeeccccCceE
Q 018816 120 LKLIGCCLEAEMPALVYEPAGYCTLADR-LYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP-QPVVFRNIEPWNIL 197 (350)
Q Consensus 120 v~~~~~~~~~~~~~lv~e~~~~~sL~~~-l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~Nil 197 (350)
...+++ ...++||||++++++... +... .. ......++.+++.++.++| . .+|+|+||||+||+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~~-~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nil 147 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV------RL-LEDPEELYDQILELMRKLY---REAGLVHGDLSEYNIL 147 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh------hh-cccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEE
Confidence 444433 246899999998654321 2110 01 1567889999999999999 7 99999999999999
Q ss_pred eCCCCceeEcccCCCccC
Q 018816 198 FQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 198 l~~~~~~kl~Dfg~~~~~ 215 (350)
++ ++.++++|||.+...
T Consensus 148 i~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 148 VD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred EE-CCcEEEEECcccccc
Confidence 99 899999999998654
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=6e-18 Score=164.12 Aligned_cols=255 Identities=16% Similarity=0.169 Sum_probs=188.4
Q ss_pred cCcccccccccCCCceEEEEEEEC--CCceEEEEEecccc--hhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeE
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLR--DRGPILVMKYRKSV--RYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPAL 134 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~--~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 134 (350)
..|....-| |+|+|+.|-..... ....+|.|.+.... ....+....|..+-..+. |+|++.+++...+.+..++
T Consensus 20 ~~~~~~~~i-g~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSI-GKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccc-cccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 344455557 99999999988883 33345555554432 233344556888888886 9999999999999999999
Q ss_pred EeecCCCCchhhhh-hCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC-ceeEcccCCC
Q 018816 135 VYEPAGYCTLADRL-YGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY-AAKLFDFSLS 212 (350)
Q Consensus 135 v~e~~~~~sL~~~l-~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~ 212 (350)
+++|.+++++.+.+ .... ...+....-..+.|+..++.|+|. ..++.|+|+||+|.+++.++ ..++.|||+|
T Consensus 99 ~~~~s~g~~~f~~i~~~~~----~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS----TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred ccCcccccccccccccCCc----cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhh
Confidence 99999999999887 3321 246667778899999999999996 67899999999999999999 9999999999
Q ss_pred ccCCC-CCcccccccccc-CCCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 018816 213 KSIPE-GKTHIKASTAIG-SLEFAAPEYLTTG-YYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFI 289 (350)
Q Consensus 213 ~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 289 (350)
..+.. ..........+| ++.|+|||...+. ...+..|+||.|+++..+++|..|+.......+. ...+.
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--------~~~~~ 244 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--------YSSWK 244 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--------ceeec
Confidence 88776 444444455568 9999999998874 5678999999999999999999998765432100 00000
Q ss_pred HhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 018816 290 RSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVA 339 (350)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl 339 (350)
....... ...+ ........+++.+++..+|+.|.+.+++-
T Consensus 245 ~~~~~~~-~~~~---------~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 245 SNKGRFT-QLPW---------NSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccc-cCcc---------ccCChhhhhcccccccCCchhcccccccc
Confidence 0000000 0000 13445678899999999999999988764
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=9.3e-16 Score=132.74 Aligned_cols=205 Identities=20% Similarity=0.168 Sum_probs=144.3
Q ss_pred HHHHhcCCCCccceeeeeecCC-----cCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 018816 109 VFASQMNHKSILKLIGCCLEAE-----MPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFP 183 (350)
Q Consensus 109 ~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~ 183 (350)
.-|-++-|.|||++..||.+.. ...+++||+..|++..+|.+..... ..+....-.+|+.||.+||.|||++ +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 4455667999999999987643 5788999999999999997643332 4577777789999999999999976 7
Q ss_pred CCeEeeccccCceEeCCCCceeEcccCCCccCCCC--CccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHH
Q 018816 184 QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEG--KTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLL 261 (350)
Q Consensus 184 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 261 (350)
.+|+|+++-.+.|++..+|-+|++--........- ..........+.++|.+||.-.....+.++|||+||+...+|.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 89999999999999999998888754332222111 1111233444788999999877777889999999999999998
Q ss_pred hCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 262 TGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 262 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
.+..-...+.. .... ...+...+.+..+. .-+.++..|++..|+.||+|.+++.
T Consensus 277 ilEiq~tnseS-----~~~~------------ee~ia~~i~~len~--------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSES-----KVEV------------EENIANVIIGLENG--------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcc-----eeeh------------hhhhhhheeeccCc--------cccCcCcccccCCCCCCcchhhhhc
Confidence 87643221110 0000 01111111111111 1236778999999999999998875
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.57 E-value=1.6e-14 Score=136.15 Aligned_cols=141 Identities=14% Similarity=0.043 Sum_probs=99.4
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchhhH----------------------------------------HHHH
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYAS----------------------------------------ERCF 105 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~----------------------------------------~~~~ 105 (350)
+-| |+|++|.||+|++++|..||||...+...... -++.
T Consensus 123 ~pl-asaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPL-AAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cce-eeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 446 99999999999998889999999876521100 0244
Q ss_pred HHHHHHHhcC----CCCccceeeeee-cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 018816 106 NNIVFASQMN----HKSILKLIGCCL-EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN-AVAYLR 179 (350)
Q Consensus 106 ~E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~-~l~~LH 179 (350)
+|+..+.+++ |.+-+.+-..+. .....+|||||++|++|.+...... ... ....++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~----~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE----AGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh----cCC---CHHHHHHHHHHHHHHHHH
Confidence 5555555542 333333333332 2345789999999999988764321 112 23456666665 477888
Q ss_pred ccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 180 FGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 180 ~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
..|++|+|++|.||+++.++.++++|||++.....
T Consensus 275 ---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 ---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 89999999999999999999999999999877643
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=2.9e-14 Score=133.07 Aligned_cols=249 Identities=16% Similarity=0.165 Sum_probs=179.8
Q ss_pred cCcccccccccC--CCceEEEEEEE---CCCceEEEEEecccc--hhhHHHHHHHHHHHHhc-CCCCccceeeeeecCCc
Q 018816 60 NNYSMRNITIDE--IEGYILYMGFL---RDRGPILVMKYRKSV--RYASERCFNNIVFASQM-NHKSILKLIGCCLEAEM 131 (350)
Q Consensus 60 ~~f~~~~~lig~--G~~g~V~~~~~---~~~~~vaik~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 131 (350)
+.|.....+ |. |.+|.||.+.. .+...+|+|+-.... +.....=.+|+.....+ .|+|.++.+..+...+.
T Consensus 114 ~~~~~~~~~-g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 114 QRFPISSRT-GSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhccccccc-ccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 345566677 99 99999999988 455588888843322 23334445677777777 49999999999999999
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHccCCCCeEeeccccCceEeCCC-CceeE
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN----AVAYLRFGFPQPVVFRNIEPWNILFQEE-YAAKL 206 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlkp~Nill~~~-~~~kl 206 (350)
.++-+|.+. .+|..+.+... ..++....+....+..+ ||.++| +.+++|.|+||+||++..+ ...++
T Consensus 193 lfiqtE~~~-~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred ceeeecccc-chhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeec
Confidence 999999994 78888776542 33666677777777777 999999 9999999999999999999 88999
Q ss_pred cccCCCccCCCCCcccc---ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHH
Q 018816 207 FDFSLSKSIPEGKTHIK---ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATGGSNFFITD 283 (350)
Q Consensus 207 ~Dfg~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 283 (350)
+|||+...+........ .....|...|++||... +.++..+|+||+|.+..+..++..+........
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~--------- 334 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS--------- 334 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC---------
Confidence 99999887766543221 11223777899999764 678899999999999999999877654331100
Q ss_pred HHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 018816 284 RVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~ 340 (350)
+....+..+-+... +.-..++...+.+|+..+|-.|++...+..
T Consensus 335 ----W~~~r~~~ip~e~~---------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 ----WSQLRQGYIPLEFC---------EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ----ccccccccCchhhh---------cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 00000100111111 122345666999999999999999887654
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.47 E-value=2.6e-12 Score=121.43 Aligned_cols=169 Identities=21% Similarity=0.188 Sum_probs=125.2
Q ss_pred EEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCC
Q 018816 80 GFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEP 158 (350)
Q Consensus 80 ~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 158 (350)
|.. .++.+|.|...............+-++.|+.++||||+++++.+......|||+|-+. .|..++. .
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk--------~ 100 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLK--------E 100 (690)
T ss_pred cceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHH--------H
Confidence 444 6667888888876654334556788899999999999999999999999999999873 5555552 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccc
Q 018816 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEY 238 (350)
Q Consensus 159 ~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 238 (350)
+.....-..+.||+.||.|||. ..+++|++|.-+.|+++..|..||++|.++........ ......--..|..|+.
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEE 176 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhh
Confidence 4455666778999999999985 66899999999999999999999999988754432111 0111111223555554
Q ss_pred cccCCCCccchhHHHHHHHHHHHhCC
Q 018816 239 LTTGYYNEKTDVYSFGKLLLVLLTGR 264 (350)
Q Consensus 239 ~~~~~~~~~~DiwslG~il~el~tg~ 264 (350)
+... .-..|.|-|||+++|++.|.
T Consensus 177 ~~~s--~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 177 IDPS--EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cCcc--ccchhhhhHHHHHHHHhCcc
Confidence 3221 14569999999999999993
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.43 E-value=7.3e-13 Score=109.11 Aligned_cols=126 Identities=14% Similarity=-0.002 Sum_probs=93.7
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCc-cceeeeeecCCcCeEEeecCCCCchh
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSI-LKLIGCCLEAEMPALVYEPAGYCTLA 145 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~sL~ 145 (350)
.+ ++|.++.||++...+ ..|++|....... ....+..|+.++..+.+.++ .+++.+. ....++||||++|.++.
T Consensus 5 ~l-~~G~~~~vy~~~~~~-~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 5 PL-KGGMTNKNYRVEVAN-KKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred ec-CCcccCceEEEEECC-eEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 45 899999999999874 4899998765432 22346789999998865554 4455443 33458999999998875
Q ss_pred hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC-----eEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 146 DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQP-----VVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 146 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
+.- . ....++.+++.+|..|| ..+ ++|+|++|.||+++ ++.++++||+.+..
T Consensus 80 ~~~----------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED----------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc----------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 430 0 11345789999999999 665 59999999999999 66899999998753
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=5.6e-13 Score=127.31 Aligned_cols=146 Identities=12% Similarity=0.089 Sum_probs=91.8
Q ss_pred cCcccccccccCCCceEEEEEEECC-CceEEEEEecccchh----------------------------------hHH--
Q 018816 60 NNYSMRNITIDEIEGYILYMGFLRD-RGPILVMKYRKSVRY----------------------------------ASE-- 102 (350)
Q Consensus 60 ~~f~~~~~lig~G~~g~V~~~~~~~-~~~vaik~~~~~~~~----------------------------------~~~-- 102 (350)
.+|+. .-+ |+|++|.||+|++++ |..||||...+.-.. -.+
T Consensus 120 ~~fd~-~Pl-asaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 120 DDFDI-KPL-ASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HhcCh-hhh-cCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 34665 556 999999999999966 889999999765211 011
Q ss_pred ----HHHHHHHHHHhcC----CCCccceeeeeec-CCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHH
Q 018816 103 ----RCFNNIVFASQMN----HKSILKLIGCCLE-AEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173 (350)
Q Consensus 103 ----~~~~E~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~ 173 (350)
++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.+.-.-.. ...+. ..++...+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~----~g~d~---~~la~~~v~ 270 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA----AGTDM---KLLAERGVE 270 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh----cCCCH---HHHHHHHHH
Confidence 1334444444442 3333333333322 345679999999999987421110 11111 112222221
Q ss_pred -HHHHHHccCCCCeEeeccccCceEeCCCC----ceeEcccCCCccCCC
Q 018816 174 -AVAYLRFGFPQPVVFRNIEPWNILFQEEY----AAKLFDFSLSKSIPE 217 (350)
Q Consensus 174 -~l~~LH~~~~~~ivH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~ 217 (350)
-+..+. ..|++|+|++|.||+++.++ .++++|||++.....
T Consensus 271 ~~~~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 123334 67999999999999999888 999999999877654
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.39 E-value=9e-12 Score=103.85 Aligned_cols=135 Identities=10% Similarity=0.053 Sum_probs=98.3
Q ss_pred ccccCCCceEEEEEEECC-------CceEEEEEecccch----------------------hhHHHH----HHHHHHHHh
Q 018816 67 ITIDEIEGYILYMGFLRD-------RGPILVMKYRKSVR----------------------YASERC----FNNIVFASQ 113 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~-------~~~vaik~~~~~~~----------------------~~~~~~----~~E~~~l~~ 113 (350)
.| |.|--+.||.|...+ +..+|+|....... ...+.+ .+|+..|.+
T Consensus 4 ~i-~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 4 CI-STGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred cc-ccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45 999999999998743 46999998764321 001222 289999999
Q ss_pred cC--CCCccceeeeeecCCcCeEEeecCCCCchhh-hhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HccCCCCeEee
Q 018816 114 MN--HKSILKLIGCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKVAMETANAVAYL-RFGFPQPVVFR 189 (350)
Q Consensus 114 l~--h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~ 189 (350)
+. .-++...+++ ...++||||+.+..+.. .+.+ ..++......+..+++.+|..| | ..+++|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 85 3566777764 45689999997654422 2211 2344556677889999999998 8 8899999
Q ss_pred ccccCceEeCCCCceeEcccCCCccCC
Q 018816 190 NIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 190 dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
||++.||+++ ++.+.|+|||.+....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999997 4679999999886553
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=4.7e-13 Score=125.04 Aligned_cols=259 Identities=13% Similarity=0.113 Sum_probs=183.7
Q ss_pred CCcccccHHH-HHHHhcCcccccccccCCCceEEEEEEE--CCCceEEEEEecccchhhHHH--HHHHHHHHHhc-CCCC
Q 018816 45 NPIRSFSSED-LKTAINNYSMRNITIDEIEGYILYMGFL--RDRGPILVMKYRKSVRYASER--CFNNIVFASQM-NHKS 118 (350)
Q Consensus 45 ~~~~~~~~~~-l~~~~~~f~~~~~lig~G~~g~V~~~~~--~~~~~vaik~~~~~~~~~~~~--~~~E~~~l~~l-~h~n 118 (350)
.+.+.|...+ ......+|.....| |.|.|+.|+.... .++..+++|...........+ -..|+-+...+ .|.+
T Consensus 249 kp~~i~~~~~~~s~~~~df~~v~~i-~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 249 KPANIFTTSDWTSCKLTDFGLVSKI-SDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred chhheecccccceeecCCcceeEEc-cCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc
Confidence 4455555555 44556788888888 9999999998776 456688888876654332222 34677777766 5999
Q ss_pred ccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 119 ILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 119 iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
++.++..|...+..++-.|||+++++...+.-. ..+.....+.+..|++.++.++| ++.++|+|++|+||++
T Consensus 328 ~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~-----~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i 399 (524)
T KOG0601|consen 328 SVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTS-----QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILI 399 (524)
T ss_pred cCCCCCCccccccccCchhhhcCcchhhhhHHH-----HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceee
Confidence 999999998888889999999999887766221 45778888999999999999999 9999999999999999
Q ss_pred CCC-CceeEcccCCCccCCCCCccccccccccCCCCC--CccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccCC
Q 018816 199 QEE-YAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFA--APEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHLSRLATG 275 (350)
Q Consensus 199 ~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 275 (350)
.++ +..+++|||+...+.-. .....+.-++. +|.......+..+.|++|||..+.+.+++.+........
T Consensus 400 ~~~~~~~~~~~~~~~t~~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-- 472 (524)
T KOG0601|consen 400 SNDGFFSKLGDFGCWTRLAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-- 472 (524)
T ss_pred ccchhhhhcccccccccccee-----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc--
Confidence 987 77899999987642211 11111333344 444444557889999999999999999987643321110
Q ss_pred CCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 018816 276 GSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMIDVAKKLR 343 (350)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~evl~~L~ 343 (350)
..+. ...-+... ....++..+..-++..++..||.+.++.....
T Consensus 473 -----------~~i~----~~~~p~~~---------~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 473 -----------LTIR----SGDTPNLP---------GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -----------eeee----cccccCCC---------chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 0000 00001110 22256778889999999999999988776543
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.31 E-value=2.9e-11 Score=103.94 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=108.4
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccch-hhHHHHHHHHHHHHhcCC--CCccceeeeeecCC---cCeEEeecCC
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVR-YASERCFNNIVFASQMNH--KSILKLIGCCLEAE---MPALVYEPAG 140 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~---~~~lv~e~~~ 140 (350)
.+ +.|..+.||++...++..+++|....... .....+.+|+.++..+++ .++.+++.+..... ..++||||++
T Consensus 5 ~l-~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 5 QL-SGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred ec-CCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 35 99999999999987756899998765432 134568899999999975 45677777776542 5689999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccC--------------------------------------
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGF-------------------------------------- 182 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 182 (350)
|.++.+.+.. ..++......++.+++.+|..||...
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9888775531 24667777788888888888888421
Q ss_pred ---------------CCCeEeeccccCceEeCC--CCceeEcccCCCcc
Q 018816 183 ---------------PQPVVFRNIEPWNILFQE--EYAAKLFDFSLSKS 214 (350)
Q Consensus 183 ---------------~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~ 214 (350)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 56789999998764
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.27 E-value=2.2e-12 Score=126.95 Aligned_cols=250 Identities=14% Similarity=0.050 Sum_probs=166.6
Q ss_pred HhcCcccccccccCCCceEEEEEEECCCc-eEEEEEecccc---hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCe
Q 018816 58 AINNYSMRNITIDEIEGYILYMGFLRDRG-PILVMKYRKSV---RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPA 133 (350)
Q Consensus 58 ~~~~f~~~~~lig~G~~g~V~~~~~~~~~-~vaik~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 133 (350)
..++|....-+ -+|.++.++.+.-...+ ..+++...... ....+....+-.++-...+|-+++....+......+
T Consensus 802 S~d~~~i~~p~-qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPS-QSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCccceecccc-cCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 45666666666 89999999887763322 22333322111 111222233333333334566666665555667889
Q ss_pred EEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 134 LVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 134 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
|+++|..+++|...++.. +..+..-.......+.+++++|| ...+.|+|++|.|.++..+++.++.|||...
T Consensus 881 L~~~~~~~~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNS-----GCLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred hhhHHhccCCchhhhhcC-----CCcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccc
Confidence 999999999999988765 34555555667788889999999 7779999999999999999999999998332
Q ss_pred cCCCC------------------------Cc-----cccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCC
Q 018816 214 SIPEG------------------------KT-----HIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGR 264 (350)
Q Consensus 214 ~~~~~------------------------~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~ 264 (350)
..+-. .. ........+|+.|.+||...+......+|+|++|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 11100 00 01122345899999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCCCCHH
Q 018816 265 TIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDRPTMI 336 (350)
Q Consensus 265 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ 336 (350)
+||....+. +.+++-. ..+..+... +...+....+++...+..+|..|..+.
T Consensus 1033 pp~na~tpq-------------~~f~ni~--~~~~~~p~g-----~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQ-------------QIFENIL--NRDIPWPEG-----PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchh-------------hhhhccc--cCCCCCCCC-----ccccChhhhhhhhhhhccCchhccCcc
Confidence 999865431 1111100 011111111 124455677889999999999997765
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=9.3e-11 Score=94.79 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=100.0
Q ss_pred ccCCCceEEEEEEECCCceEEEEEecccc--------hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCC
Q 018816 69 IDEIEGYILYMGFLRDRGPILVMKYRKSV--------RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAG 140 (350)
Q Consensus 69 ig~G~~g~V~~~~~~~~~~vaik~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 140 (350)
+++|+-+.+|.+.+.+. ++++|.=.+.. .-..++-.+|+.++.++.--.|....-+..+.+...|+|||++
T Consensus 4 i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 4 IKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 38999999999988665 55665532221 1123456789999999875555555555567788899999999
Q ss_pred CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 141 YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 141 ~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
|..|.+.+... ...++..+-.-+.-|| ..+|+|+||.++||+++... +.++|||++..
T Consensus 83 G~~lkd~l~~~------------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA------------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc------------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999888542 2567888888899999 99999999999999998776 99999999874
No 446
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.25 E-value=5.4e-10 Score=100.68 Aligned_cols=268 Identities=16% Similarity=0.049 Sum_probs=168.4
Q ss_pred cccccccCCCceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhc-CCCCccceeeeee------cC-CcCeE
Q 018816 64 MRNITIDEIEGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQM-NHKSILKLIGCCL------EA-EMPAL 134 (350)
Q Consensus 64 ~~~~lig~G~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~------~~-~~~~l 134 (350)
...-| |+|+-+.+|-.-. .+ -+.|.++........+... .|... .||-+-.-+.|=. +. ...-+
T Consensus 15 ~gr~L-gqGgea~ly~l~e~~d---~VAKIYh~Pppa~~aqk~a---~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 15 PGRPL-GQGGEADLYTLGEVRD---QVAKIYHAPPPAAQAQKVA---ELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCccc-cCCccceeeecchhhc---hhheeecCCCchHHHHHHH---HhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34556 9999999996544 33 3678877665443333222 22222 4554332122110 11 12556
Q ss_pred EeecCCCCc-hhhhhhC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 135 VYEPAGYCT-LADRLYG-PLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 135 v~e~~~~~s-L~~~l~~-~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
+|+.+++.. +.+++.. ...++.....|.-.++.++.++.+.+-|| ..|.+-+|+.++|+|+++++.+.|.|-...
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccce
Confidence 777766542 2233221 22345567889999999999999999999 999999999999999999999999986654
Q ss_pred ccCCCCCccccccccccCCCCCCccccccC-----CCCccchhHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHH
Q 018816 213 KSIPEGKTHIKASTAIGSLEFAAPEYLTTG-----YYNEKTDVYSFGKLLLVLLTG-RTIGHLSRLATGGSNFFITDRVE 286 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~ 286 (350)
....++.. ....+|...|.+||.-.-+ .-+...|.|.||+++|+++.| ++||..-................
T Consensus 165 qi~~ng~~---~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 165 QINANGTL---HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred eeccCCce---EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 44333222 2344588999999976522 346789999999999999886 89997654332222221111111
Q ss_pred HH---HHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHHhhhcC
Q 018816 287 KF---IRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHS--AEDRPTMIDVAKKLRQMYRTS 349 (350)
Q Consensus 287 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~--P~~RPt~~evl~~L~~~~~~~ 349 (350)
-. ..+.+.... |..... .-+..++.+..|..+|+..- +.-|||++..+..|..+.++.
T Consensus 242 g~f~ya~~~~~g~~-p~P~~~----P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 242 GRFAYASDQRRGLK-PPPRSI----PLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred ceeeechhccCCCC-CCCCCC----ChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 11 111111111 111111 11356678889999999874 678999999999998887654
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.23 E-value=1.6e-10 Score=93.07 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=104.8
Q ss_pred ccccccCCCceEEEEEEECCCceEEEEE-ecccc-------hhhHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEe
Q 018816 65 RNITIDEIEGYILYMGFLRDRGPILVMK-YRKSV-------RYASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~~~~~vaik~-~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 136 (350)
...+ -+|+-+.|+++.+.+. ..+||. +.+.- .-...+..+|+++|.++.--.|.-..-++.+...-.|+|
T Consensus 12 l~li-kQGAEArv~~~~~~Ge-~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 12 LELI-KQGAEARVPRGSFSGE-AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred ceee-eccceeeEeeeccCCc-eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3455 9999999999999776 444443 33221 123566789999999987556655555667777889999
Q ss_pred ecCCC-CchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc---eeEcccCCC
Q 018816 137 EPAGY-CTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA---AKLFDFSLS 212 (350)
Q Consensus 137 e~~~~-~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~---~kl~Dfg~~ 212 (350)
||++| .++.+++..... ..........++..|-..+.-|| ..+|||+||-.+||++..++. +.++|||++
T Consensus 90 E~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred EeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecch
Confidence 99987 478888765322 12222233788999999999999 999999999999999976543 589999998
Q ss_pred ccC
Q 018816 213 KSI 215 (350)
Q Consensus 213 ~~~ 215 (350)
...
T Consensus 164 ~~s 166 (229)
T KOG3087|consen 164 SVS 166 (229)
T ss_pred hcc
Confidence 653
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.16 E-value=5.7e-10 Score=92.71 Aligned_cols=126 Identities=16% Similarity=0.142 Sum_probs=83.8
Q ss_pred EEEEEEECCCceEEEEEecccch--------------------------hhHHHHHHHHHHHHhcCCC--Cccceeeeee
Q 018816 76 ILYMGFLRDRGPILVMKYRKSVR--------------------------YASERCFNNIVFASQMNHK--SILKLIGCCL 127 (350)
Q Consensus 76 ~V~~~~~~~~~~vaik~~~~~~~--------------------------~~~~~~~~E~~~l~~l~h~--niv~~~~~~~ 127 (350)
.||.|...++..+|+|....... .......+|...|.++... ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998888999999765321 0123456899999999754 567776552
Q ss_pred cCCcCeEEeecCC--CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHccCCCCeEeeccccCceEeCCCCce
Q 018816 128 EAEMPALVYEPAG--YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAY-LRFGFPQPVVFRNIEPWNILFQEEYAA 204 (350)
Q Consensus 128 ~~~~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlkp~Nill~~~~~~ 204 (350)
...|||||++ |..+..+... .++......++.+++..+.. +| ..||+|+||.+.||+++.+ .+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CE
T ss_pred ---CCEEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eE
Confidence 3479999998 6555544322 12234456677888875544 58 8999999999999999888 89
Q ss_pred eEcccCCCccCC
Q 018816 205 KLFDFSLSKSIP 216 (350)
Q Consensus 205 kl~Dfg~~~~~~ 216 (350)
.++|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999876543
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.10 E-value=1.6e-09 Score=95.36 Aligned_cols=138 Identities=10% Similarity=0.007 Sum_probs=99.8
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchh-----------hHHHHHHHHHHHHhcCCCC--ccceeeeeec-----CCc
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRY-----------ASERCFNNIVFASQMNHKS--ILKLIGCCLE-----AEM 131 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~-----------~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~-----~~~ 131 (350)
-......|.++...+. .+.||+....... ....+.+|...+.++...+ .+..+++... ...
T Consensus 31 ~~~~~rrvvr~~~~g~-~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 31 RELEGRRTLRFELAGK-SYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred ecCCCceEEEEEECCE-EEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 5555566778776554 8999987543311 1113778999888885333 3444555443 224
Q ss_pred CeEEeecCCCC-chhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC-------CCc
Q 018816 132 PALVYEPAGYC-TLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE-------EYA 203 (350)
Q Consensus 132 ~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~-------~~~ 203 (350)
.+||||++++. +|.+++..... .+.+......++.+++..+.-|| ..||+|+|+++.|||++. +..
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 68999999876 79888743211 34566777899999999999999 999999999999999975 467
Q ss_pred eeEcccCCCcc
Q 018816 204 AKLFDFSLSKS 214 (350)
Q Consensus 204 ~kl~Dfg~~~~ 214 (350)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999998753
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.07 E-value=1.2e-08 Score=94.36 Aligned_cols=171 Identities=15% Similarity=0.127 Sum_probs=128.3
Q ss_pred CceEEEEEEE-CCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccceeeeeec----CCcCeEEeecCCC-Cchhh
Q 018816 73 EGYILYMGFL-RDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILKLIGCCLE----AEMPALVYEPAGY-CTLAD 146 (350)
Q Consensus 73 ~~g~V~~~~~-~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-~sL~~ 146 (350)
.-.+.|++.. -||..|++|+++-...........-++..+++.|+|+|.+.+++.. +..+++|++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3458899998 6777999999944333333344456788899999999999998873 4578999999875 46877
Q ss_pred hhhCCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 147 RLYGPLQT----------HLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 147 ~l~~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
+....... .....++...+.++.|+..||.++| +.|+..+-|.|.+||++.+..++|+..|..-...
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 65432111 1134678889999999999999999 8999999999999999999999998888765443
Q ss_pred CCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCC
Q 018816 217 EGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRT 265 (350)
Q Consensus 217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~ 265 (350)
.... |.+. -..+-|.=.||.+++.|.||..
T Consensus 445 ~d~~----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT----------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC----------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 2220 0111 1356899999999999999865
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.96 E-value=1.1e-08 Score=87.75 Aligned_cols=134 Identities=13% Similarity=0.054 Sum_probs=98.4
Q ss_pred ccccccccCCCceEEEEEEECCCceEEEEEecccch----------------------hhHHHHHHHHHHHHhcCCC--C
Q 018816 63 SMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVR----------------------YASERCFNNIVFASQMNHK--S 118 (350)
Q Consensus 63 ~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~--n 118 (350)
.....| |-|.-+.||.|....+.++|+|.=.-... -+.....+|.++|.+|... .
T Consensus 94 ~iG~~I-GvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKI-GVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhcccc-ccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 344566 99999999999998888999987432211 1223466899999999644 6
Q ss_pred ccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEe
Q 018816 119 ILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILF 198 (350)
Q Consensus 119 iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill 198 (350)
+...+++ +.-.+|||+++|..|... +++....-.++..|+.-+.-+- ..|+||+|+++-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~----------r~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRL----------RLDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecc----------cCcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEE
Confidence 7777664 455799999988666442 1234444556666666666665 6789999999999999
Q ss_pred CCCCceeEcccCCCcc
Q 018816 199 QEEYAAKLFDFSLSKS 214 (350)
Q Consensus 199 ~~~~~~kl~Dfg~~~~ 214 (350)
+.+|.+.++||-.+..
T Consensus 236 ~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 236 TEDGDIVVIDWPQAVP 251 (304)
T ss_pred ecCCCEEEEeCccccc
Confidence 9999999999976654
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=4.4e-10 Score=106.96 Aligned_cols=151 Identities=23% Similarity=0.195 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccc-------cccccccCCCCCCcccccc
Q 018816 169 METANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHI-------KASTAIGSLEFAAPEYLTT 241 (350)
Q Consensus 169 ~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~ 241 (350)
.+++.|+.|+|. +.++||++|.|++|.++.++..||+.|+.+.....+.... ..........|.|||++.+
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 344599999996 6789999999999999999999999999876554422111 1112224567999999998
Q ss_pred CCCCccchhHHHHHHHHHHHhCC-CCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHH
Q 018816 242 GYYNEKTDVYSFGKLLLVLLTGR-TIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVEL 320 (350)
Q Consensus 242 ~~~~~~~DiwslG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 320 (350)
...+.++|+||+||++|.+..|. ..+...... +... .. ....+-.. ...+ ...++++.+=
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-------~~~~----~~---~~~~~~~~-~~~s----~~~p~el~~~ 244 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-------LSYS----FS---RNLLNAGA-FGYS----NNLPSELRES 244 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCc-------chhh----hh---hccccccc-cccc----ccCcHHHHHH
Confidence 88899999999999999999544 433322110 0000 00 00000000 0000 1566788899
Q ss_pred HHHccccCCCCCCCHHHHHH
Q 018816 321 AFKCLSHSAEDRPTMIDVAK 340 (350)
Q Consensus 321 ~~~cl~~~P~~RPt~~evl~ 340 (350)
+.+++..++..||++..+..
T Consensus 245 l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 245 LKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHHHhcCCcccCcchhhhhc
Confidence 99999999999997776653
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.85 E-value=2.5e-08 Score=84.82 Aligned_cols=107 Identities=17% Similarity=0.096 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhcC--CCCccceeeeeecCC----cCeEEeecCCCC-chhhhhhCCCCCCCCCCCHHHHHHHHHHHHH
Q 018816 101 SERCFNNIVFASQMN--HKSILKLIGCCLEAE----MPALVYEPAGYC-TLADRLYGPLQTHLEPLLLTHRLKVAMETAN 173 (350)
Q Consensus 101 ~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~----~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~ 173 (350)
.....+|...+.+|. .-.+...+++..... ..++|+|++++. +|.+++... ...+......++.+++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~-----~~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW-----EQLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh-----cccchhhHHHHHHHHHH
Confidence 346778888888875 334566666665533 348999999874 799988653 22566678899999999
Q ss_pred HHHHHHccCCCCeEeeccccCceEeCCCC---ceeEcccCCCccC
Q 018816 174 AVAYLRFGFPQPVVFRNIEPWNILFQEEY---AAKLFDFSLSKSI 215 (350)
Q Consensus 174 ~l~~LH~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~~~~~ 215 (350)
.+.-|| ..||+|+|+++.|||++.+. .+.++||+.+...
T Consensus 130 ~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 130 LIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 99999999999999999887 8999999987653
No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.81 E-value=1.1e-07 Score=79.67 Aligned_cols=137 Identities=12% Similarity=0.043 Sum_probs=104.0
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccc------hhhHHHHHHHHHHHHhcCC--CCccceeeeee-cC----CcCeEEe
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSV------RYASERCFNNIVFASQMNH--KSILKLIGCCL-EA----EMPALVY 136 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~-~~----~~~~lv~ 136 (350)
|+||-+.|++....+. .+.+|+-.... +.....|.+|+..+.+|.. -.+.+.. ++. .. -..+||+
T Consensus 27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 8899999999887666 78899865211 2356789999999999853 3355555 332 11 1467999
Q ss_pred ecCC-CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCc--eeEcccCCCc
Q 018816 137 EPAG-YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYA--AKLFDFSLSK 213 (350)
Q Consensus 137 e~~~-~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~ 213 (350)
|-++ ..+|.+++..... .+.+...+..+..+++..+.-|| +.|+.|+|+-+.||+++.++. +.++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 9764 3588888754321 45677888899999999999999 999999999999999987777 9999998765
Q ss_pred c
Q 018816 214 S 214 (350)
Q Consensus 214 ~ 214 (350)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 4
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.72 E-value=8.7e-08 Score=91.37 Aligned_cols=138 Identities=14% Similarity=0.031 Sum_probs=92.6
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchhh----------------------------------------HHHHHHHHH
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRYA----------------------------------------SERCFNNIV 109 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~~----------------------------------------~~~~~~E~~ 109 (350)
+.++-|.||+|++++|..||||..+++-... .=++.+|..
T Consensus 134 AsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~ 213 (517)
T COG0661 134 ASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAA 213 (517)
T ss_pred hhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHH
Confidence 9999999999999989999999998764210 001334555
Q ss_pred HHHhcC-----CCCccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHHccCC
Q 018816 110 FASQMN-----HKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANA-VAYLRFGFP 183 (350)
Q Consensus 110 ~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~-l~~LH~~~~ 183 (350)
-+.+++ .+++.-.-=++.-.....|+|||++|..+.+...-.. ...+ ...++..++.+ +..+- .
T Consensus 214 n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d---~k~ia~~~~~~f~~q~~---~ 283 (517)
T COG0661 214 NAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS----AGID---RKELAELLVRAFLRQLL---R 283 (517)
T ss_pred HHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh----cCCC---HHHHHHHHHHHHHHHHH---h
Confidence 554442 3333222222333456689999999999988753221 2233 23344444433 33333 5
Q ss_pred CCeEeeccccCceEeCCCCceeEcccCCCccCCC
Q 018816 184 QPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 184 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 217 (350)
.|+.|.|.+|.||+++.+|.+-+.|||+......
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 6999999999999999999999999999876654
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.65 E-value=4.2e-07 Score=78.31 Aligned_cols=141 Identities=11% Similarity=0.033 Sum_probs=84.5
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--CccceeeeeecCCcCeEEeecCCCCc-
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--SILKLIGCCLEAEMPALVYEPAGYCT- 143 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~~s- 143 (350)
.| |+|..+.||+. . +..+++|...... ......+|.+++..+..- .+.+.+++..+.+...+|||+++|.+
T Consensus 8 ~i-~~G~t~~~y~~--~-~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 8 QT-GEGGNGESYTH--K-TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred ee-cCCCCcceeEe--c-CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 34 99999999984 2 3367788876543 334578899999988643 35777888877777889999998863
Q ss_pred hhhhhhCC-----------------C-CCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHc-cCCCCeEeeccc
Q 018816 144 LADRLYGP-----------------L-QTHLEPLLLTHRLK-VAM----------ETAN-AVAYLRF-GFPQPVVFRNIE 192 (350)
Q Consensus 144 L~~~l~~~-----------------~-~~~~~~~~~~~~~~-i~~----------~i~~-~l~~LH~-~~~~~ivH~dlk 192 (350)
+...+... . .............. +.. .+.. ...+|.. .....++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 22111100 0 00000111111100 000 0111 1122221 113467999999
Q ss_pred cCceEeCCCCceeEcccCCCcc
Q 018816 193 PWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 193 p~Nill~~~~~~kl~Dfg~~~~ 214 (350)
|.||+++.++ +.++||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999997753
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.64 E-value=7.6e-07 Score=75.85 Aligned_cols=154 Identities=18% Similarity=0.140 Sum_probs=103.3
Q ss_pred ccHHHHHHHhcCccccccc--ccCCCceEEEEEEECCCceEEEEEecccchhhH------------------------HH
Q 018816 50 FSSEDLKTAINNYSMRNIT--IDEIEGYILYMGFLRDRGPILVMKYRKSVRYAS------------------------ER 103 (350)
Q Consensus 50 ~~~~~l~~~~~~f~~~~~l--ig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~------------------------~~ 103 (350)
.+.+.|............. |++|.-+.||+|...++..+|+|++........ .-
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 5556666655555554443 266667799999998888999999876532111 11
Q ss_pred HHHHHHHHHhcC--CCCccceeeeeecCCcCeEEeecCCCCchh-hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q 018816 104 CFNNIVFASQMN--HKSILKLIGCCLEAEMPALVYEPAGYCTLA-DRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRF 180 (350)
Q Consensus 104 ~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~sL~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~ 180 (350)
...|+.-|.++. +-.+.+.+++. .-.|||||+...... -.|.+ -++.......+..++++.+.-|-.
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD------v~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD------VPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc------CCcCchhHHHHHHHHHHHHHHHHH
Confidence 336777777773 44555555543 346999998543111 11111 223333677788888888888872
Q ss_pred cCCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 181 GFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 181 ~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
..++||+||+.-|||+. ++.+.++|||.|....
T Consensus 185 --~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 --EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 37999999999999999 8899999999886554
No 458
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.58 E-value=3.8e-06 Score=70.05 Aligned_cols=104 Identities=20% Similarity=0.211 Sum_probs=82.3
Q ss_pred HHHHHHHhcCC-CCccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 018816 106 NNIVFASQMNH-KSILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQ 184 (350)
Q Consensus 106 ~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~ 184 (350)
+|.-++..+++ +++++++|+|-. ++|.||.+.+++...- ... ...-..+|..+.+||.+++..+.+|++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~-~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIY-RPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccc-ccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57888888876 699999999933 6899999877664320 000 0113578999999999999999999976656
Q ss_pred CeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 185 PVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 185 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
.+.-+|++|+|+-+++++.+|++|.+.....
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 7889999999999999999999999876443
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.55 E-value=7e-07 Score=75.19 Aligned_cols=137 Identities=13% Similarity=0.068 Sum_probs=90.5
Q ss_pred hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHH---------HHHHHHHhcCCC---Cccceeeee
Q 018816 59 INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCF---------NNIVFASQMNHK---SILKLIGCC 126 (350)
Q Consensus 59 ~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~---------~E~~~l~~l~h~---niv~~~~~~ 126 (350)
.++|...+++ -.....-|.+-..+++ .+++|..........+.|. +++..+.+++.. ....++.+.
T Consensus 30 ~~~~~~~kv~-k~~~r~~ValIei~~~-kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVF-KNTKRNYVALIEIDGK-KYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEee-cCCCccEEEEEEECCc-EEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 4667777777 6766667777666665 8999988765543333322 344444444322 222222222
Q ss_pred e-----cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCC
Q 018816 127 L-----EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEE 201 (350)
Q Consensus 127 ~-----~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~ 201 (350)
. -....+++|||++|..|.+... ++. .++..+++++.-|| ..|+.|+|..|.|++++.+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECC
Confidence 2 1234568999999988876531 222 35567788899999 9999999999999999865
Q ss_pred CceeEcccCCCcc
Q 018816 202 YAAKLFDFSLSKS 214 (350)
Q Consensus 202 ~~~kl~Dfg~~~~ 214 (350)
+ ++++||+..+.
T Consensus 172 ~-i~iID~~~k~~ 183 (229)
T PF06176_consen 172 G-IRIIDTQGKRM 183 (229)
T ss_pred c-EEEEECccccc
Confidence 5 89999986543
No 460
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.54 E-value=1.9e-08 Score=95.25 Aligned_cols=183 Identities=15% Similarity=0.016 Sum_probs=133.6
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCC-ccceeeeeecCCcCeEEeecCCCC-c
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKS-ILKLIGCCLEAEMPALVYEPAGYC-T 143 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~-s 143 (350)
+.+ ++|+++.++|.+....+....+.+... ....-++++|.+++||| .+..++-+......+++++++.++ +
T Consensus 248 h~f-vK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 248 HNF-VKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHH-HHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 445 899999999998744444444444322 34556889999999999 777777777778899999999877 3
Q ss_pred hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCcccc
Q 018816 144 LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIK 223 (350)
Q Consensus 144 L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 223 (350)
......... ..+...+...+.+.-..++++|| +..=+|+| ||+..+ +..+.+||+....+.... .
T Consensus 322 ~~~~~~~se----~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~ 386 (829)
T KOG0576|consen 322 SALEMTVSE----IALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---K 386 (829)
T ss_pred ccccCChhh----Hhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc---c
Confidence 222211110 23344445566777788999999 55568888 776655 678999999887665443 3
Q ss_pred ccccccCCCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 018816 224 ASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTGRTIGHL 269 (350)
Q Consensus 224 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 269 (350)
..+..+++.++|||+...+.+..+.|.|++|+-..++.-|-+|-..
T Consensus 387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 4556699999999999999999999999999887788888777543
No 461
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.49 E-value=3e-06 Score=71.06 Aligned_cols=132 Identities=18% Similarity=0.148 Sum_probs=92.3
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccc----------------hhhHHHHHHHHHHHHhcC------CCCcccee
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSV----------------RYASERCFNNIVFASQMN------HKSILKLI 123 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~~~ 123 (350)
..| |+|+.-.||. +.+.....||...... ....++..+|+.-...+. +.+|.+++
T Consensus 7 ~~i-~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLI-AQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred ccc-ccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 445 9999999987 5444567888887665 122355667776666555 88999999
Q ss_pred eeeecCCcCeEEeecCC------CCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceE
Q 018816 124 GCCLEAEMPALVYEPAG------YCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNIL 197 (350)
Q Consensus 124 ~~~~~~~~~~lv~e~~~------~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nil 197 (350)
|+..++..+-+|+|.+. ..+|.+++.. ..++. ...+.+. .-..||- ..+|+.+|++|.||+
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~------~~~~~-~~~~~L~---~f~~~l~---~~~Iv~~dl~~~NIv 150 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE------GGLTE-ELRQALD---EFKRYLL---DHHIVIRDLNPHNIV 150 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc------CCccH-HHHHHHH---HHHHHHH---HcCCeecCCCcccEE
Confidence 99999999999999753 2367777744 23444 3333333 4445555 778999999999999
Q ss_pred eCCCC----ceeEcc-cCCCc
Q 018816 198 FQEEY----AAKLFD-FSLSK 213 (350)
Q Consensus 198 l~~~~----~~kl~D-fg~~~ 213 (350)
+..+. .+.|+| ||...
T Consensus 151 ~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 151 VQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred EEecCCCceEEEEEeCCCCcc
Confidence 96432 578888 56543
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.45 E-value=1.3e-06 Score=83.14 Aligned_cols=158 Identities=13% Similarity=0.028 Sum_probs=97.8
Q ss_pred cccccHHHHHHH------------hcCcccccccccCCCceEEEEEEECCCceEEEEEecccchhh--------------
Q 018816 47 IRSFSSEDLKTA------------INNYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYA-------------- 100 (350)
Q Consensus 47 ~~~~~~~~l~~~------------~~~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~-------------- 100 (350)
..+++++|+... ...|+.. -| |..+.|.||+|++++|..||||.-++.-...
T Consensus 137 ~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~-pi-aaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~ 214 (538)
T KOG1235|consen 137 APPFPWEEAFKIFEEELGAPIEDIFSEFDEE-PI-AAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKV 214 (538)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHHHHhcCcc-hh-hhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHH
Confidence 345777776433 2344433 34 9999999999999999999999987753210
Q ss_pred -----------------HH------HHHHHHHHHH----hcCCCC------ccceeeeeecCCcCeEEeecCCCCchhhh
Q 018816 101 -----------------SE------RCFNNIVFAS----QMNHKS------ILKLIGCCLEAEMPALVYEPAGYCTLADR 147 (350)
Q Consensus 101 -----------------~~------~~~~E~~~l~----~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~~sL~~~ 147 (350)
.+ +|.+|++-.. .+.|-+ |.+++-.+ .....|+||||+|.-+.|.
T Consensus 215 l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl 292 (538)
T KOG1235|consen 215 LQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDL 292 (538)
T ss_pred HHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCH
Confidence 11 1334433222 223444 33333332 2356899999999988775
Q ss_pred hhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC----CCceeEcccCCCccCCC
Q 018816 148 LYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE----EYAAKLFDFSLSKSIPE 217 (350)
Q Consensus 148 l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~----~~~~kl~Dfg~~~~~~~ 217 (350)
-.-.. ..++... ++..+.++...+= ...|++|+|=+|.||++.. ++.+.+.|||+...+..
T Consensus 293 ~~i~~----~gi~~~~---i~~~l~~~~~~qI--f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 293 DAIDK----RGISPHD---ILNKLVEAYLEQI--FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHH----cCCCHHH---HHHHHHHHHHHHH--HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 32211 2344443 3333333322211 1458999999999999984 67899999999876543
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.45 E-value=2.8e-06 Score=74.27 Aligned_cols=136 Identities=12% Similarity=-0.038 Sum_probs=83.0
Q ss_pred CceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcC-CCCccceeeeeecCCcCeEEeecCCCCchhhhhh--
Q 018816 73 EGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMN-HKSILKLIGCCLEAEMPALVYEPAGYCTLADRLY-- 149 (350)
Q Consensus 73 ~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~-- 149 (350)
....||+....+ ..+++|...... ...+.+|+.++..+. +--+.+++++....+..++|||+++|.++.....
T Consensus 11 ~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~ 86 (244)
T cd05150 11 SGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEEL 86 (244)
T ss_pred CcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhccc
Confidence 347999998754 578888875542 345678988888884 4456677887776667899999999887764321
Q ss_pred -----------------CCCCCCCCCCC--HHHHHHHHHH--------------------HHHHHHHHHc----cCCCCe
Q 018816 150 -----------------GPLQTHLEPLL--LTHRLKVAME--------------------TANAVAYLRF----GFPQPV 186 (350)
Q Consensus 150 -----------------~~~~~~~~~~~--~~~~~~i~~~--------------------i~~~l~~LH~----~~~~~i 186 (350)
.-.... .++. .......... +...+..|-. .....+
T Consensus 87 ~~~~~~~~l~~~l~~lH~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 165 (244)
T cd05150 87 EPERLVDALAEALRRLHALPVAD-CPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVV 165 (244)
T ss_pred CHHHHHHHHHHHHHHHhcCCccc-CCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEE
Confidence 100000 0111 0000100000 1111122210 113569
Q ss_pred EeeccccCceEeCCCCceeEcccCCCc
Q 018816 187 VFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 187 vH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
+|+|+.|.|||++++..+.|+||+.+.
T Consensus 166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 166 THGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ECCCCCCccEEEeCCcEEEEEEccccc
Confidence 999999999999998778999998765
No 464
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.38 E-value=5.1e-06 Score=71.68 Aligned_cols=142 Identities=17% Similarity=0.123 Sum_probs=83.4
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--Cccceeeeeec---CCcCeEEeecCCC
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--SILKLIGCCLE---AEMPALVYEPAGY 141 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e~~~~ 141 (350)
.+ +.|..+.||+....++ .+++|..... .....+.+|..++..+... .+.+++.+... ....+++|+++++
T Consensus 4 ~l-~~G~~n~~~~v~~~~~-~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 4 PL-SGGFSNRVYRVTTDDG-RYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EE-EESSSSEEEEEEETTS-EEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred cC-CCCCeeeEEEEEECCc-EEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 45 8899999999999885 9999997665 4456778899998888532 35666664433 2346899999998
Q ss_pred Cchhh----------------hhh---CCCCCCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHc
Q 018816 142 CTLAD----------------RLY---GPLQTHLEPLLLTH---------RLKV------------AMETAN-AVAYLRF 180 (350)
Q Consensus 142 ~sL~~----------------~l~---~~~~~~~~~~~~~~---------~~~i------------~~~i~~-~l~~LH~ 180 (350)
.++.. .+. ...... .+..... .... ...+.. .+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPF-SPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTC-CCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccc-cccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 88777 110 110000 0111110 0000 111222 2333331
Q ss_pred ----cCCCCeEeeccccCceEeC-CCCceeEcccCCCc
Q 018816 181 ----GFPQPVVFRNIEPWNILFQ-EEYAAKLFDFSLSK 213 (350)
Q Consensus 181 ----~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfg~~~ 213 (350)
.....++|+|+.|.||+++ +++.+-|+||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1256799999999999999 56666899998764
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.32 E-value=6.7e-06 Score=66.44 Aligned_cols=127 Identities=9% Similarity=0.063 Sum_probs=87.5
Q ss_pred ccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCccc-eeeeeecCCcCeEEeecCCCCc
Q 018816 65 RNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSILK-LIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 65 ~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~~s 143 (350)
...| ++|.+|.||+|.+.++ .+|+|.-..++ ....+..|+++|..++..++.. ++.|-. ..+.|||++|-.
T Consensus 27 ~~~L-~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~ 98 (201)
T COG2112 27 EKEL-AKGTTSVVYLGEWRGG-EVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRP 98 (201)
T ss_pred hhhh-hcccccEEEEeeccCc-eEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcc
Confidence 3456 9999999999999887 89999876653 4577889999999998766543 443322 235599999888
Q ss_pred hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeecccc-CceEeCCCCceeEcccCCCcc
Q 018816 144 LADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEP-WNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 144 L~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp-~Nill~~~~~~kl~Dfg~~~~ 214 (350)
|.+.-.. .+-.+ ...++..---|- ..||-|..|.- ...++-+++.+.|+||..|+.
T Consensus 99 L~~~~~~--------~~rk~----l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 99 LGKLEIG--------GDRKH----LLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhc--------ccHHH----HHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 8776532 12222 333344433344 67888998864 444444555899999998874
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.23 E-value=1.9e-05 Score=80.90 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=56.5
Q ss_pred cccccCCCceEEEEEEECCC---ceEEEEEecccc-hhhHHHHHHHHHHHHhcC-CCCc--cceeeeeecC---CcCeEE
Q 018816 66 NITIDEIEGYILYMGFLRDR---GPILVMKYRKSV-RYASERCFNNIVFASQMN-HKSI--LKLIGCCLEA---EMPALV 135 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~---~~vaik~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~~~~~~~~~---~~~~lv 135 (350)
..+ +.|.+..+|+....++ ..+++|+..... ......+.+|+.+++.+. |+++ .+++.+|.+. +..++|
T Consensus 44 ~~l-~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 44 SQF-GHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEe-CCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 445 8999999999887553 367777754432 123456889999999995 6664 7888888764 467899
Q ss_pred eecCCCCch
Q 018816 136 YEPAGYCTL 144 (350)
Q Consensus 136 ~e~~~~~sL 144 (350)
|||++|..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999987654
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.21 E-value=1.7e-05 Score=68.95 Aligned_cols=70 Identities=10% Similarity=-0.080 Sum_probs=44.3
Q ss_pred cCCCce-EEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC---CccceeeeeecC---CcCeEEeecCCCC
Q 018816 70 DEIEGY-ILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK---SILKLIGCCLEA---EMPALVYEPAGYC 142 (350)
Q Consensus 70 g~G~~g-~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~~~~~ 142 (350)
+.|+.. .||+.. ..+++|..... .....+.+|..++..+... .+..+++..... ...+++|++++|.
T Consensus 6 ~~gG~~n~vy~~~----~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~ 79 (235)
T cd05155 6 DSGGTDNATFRLG----DDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGE 79 (235)
T ss_pred cCCCcccceEEcC----CceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCC
Confidence 666665 588752 25677765442 2345788999999888532 345555544332 2458899999987
Q ss_pred chh
Q 018816 143 TLA 145 (350)
Q Consensus 143 sL~ 145 (350)
++.
T Consensus 80 ~l~ 82 (235)
T cd05155 80 TAT 82 (235)
T ss_pred CCC
Confidence 764
No 468
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.07 E-value=2.8e-05 Score=79.03 Aligned_cols=195 Identities=18% Similarity=0.190 Sum_probs=132.3
Q ss_pred HHHHHHHHHhcCCCCccceeeeeecCCcC----eEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018816 104 CFNNIVFASQMNHKSILKLIGCCLEAEMP----ALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLR 179 (350)
Q Consensus 104 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH 179 (350)
..-|+..+..++|+|++.++.|-...... .+..+++..-++...+... ...+....+.+..+...||.|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v-----~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV-----GSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc-----cccCHHHHHHHHHHHhhhHHHHH
Confidence 33566777888999999999987654432 3445678777887777543 67889999999999999999999
Q ss_pred ccCCCCeEeeccccC---ceEeCCCCceeEc--ccCCCccCCCCCccccccccccCCCCCCccccccCCCC--ccchhHH
Q 018816 180 FGFPQPVVFRNIEPW---NILFQEEYAAKLF--DFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYN--EKTDVYS 252 (350)
Q Consensus 180 ~~~~~~ivH~dlkp~---Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~Diws 252 (350)
.....|.-+... +--.+..+.+..+ ||+.+...+..... .....+..+.+||........ ...|+|.
T Consensus 304 ---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~ 377 (1351)
T KOG1035|consen 304 ---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWC 377 (1351)
T ss_pred ---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHH
Confidence 555555544444 3334455666666 88887766543321 122245567788877665544 4479999
Q ss_pred HHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHHhcCCCccCccccCCCCccchHHHHHHHHHHHHHccccCCCCC
Q 018816 253 FGKLLLVLLTGRTIGHLSRLATGGSNFFITDRVEKFIRSNGYMNIDPVIVGDRSCFRKEEKLQAYVELAFKCLSHSAEDR 332 (350)
Q Consensus 253 lG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 332 (350)
+|.....+..|..+....... ...++. .......+...+|+..++++|
T Consensus 378 lgll~~~~~~~~~i~~~~~~~--------------------~~~l~~------------~~~~~~~d~~~~~~~~~~~~R 425 (1351)
T KOG1035|consen 378 LGLLLLQLSQGEDISEKSAVP--------------------VSLLDV------------LSTSELLDALPKCLDEDSEER 425 (1351)
T ss_pred HHHHHhhhhhcCcccccccch--------------------hhhhcc------------ccchhhhhhhhhhcchhhhhc
Confidence 999999999988763321110 001110 111156788899999999999
Q ss_pred CCHHHHHHH
Q 018816 333 PTMIDVAKK 341 (350)
Q Consensus 333 Pt~~evl~~ 341 (350)
+++.+++..
T Consensus 426 l~~~~ll~~ 434 (1351)
T KOG1035|consen 426 LSALELLTH 434 (1351)
T ss_pred cchhhhhhc
Confidence 999998864
No 469
>PRK10593 hypothetical protein; Provisional
Probab=98.06 E-value=0.00011 Score=66.19 Aligned_cols=75 Identities=9% Similarity=-0.021 Sum_probs=55.5
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCC---CCccceeeeeecC---CcCeEEeecC
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNH---KSILKLIGCCLEA---EMPALVYEPA 139 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~---~~~~lv~e~~ 139 (350)
.-| |+|..+.||.....++ .+++|..... .....+..|...|+.|.- ..+.+++++|.+. +..+||||++
T Consensus 20 ~~i-~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i 95 (297)
T PRK10593 20 ECI-SEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL 95 (297)
T ss_pred eec-CCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence 345 9999999999987666 5666664331 123578899999998853 4688888887543 5689999999
Q ss_pred CCCch
Q 018816 140 GYCTL 144 (350)
Q Consensus 140 ~~~sL 144 (350)
++.++
T Consensus 96 ~G~~~ 100 (297)
T PRK10593 96 RGVSV 100 (297)
T ss_pred CCEec
Confidence 98765
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.97 E-value=0.00011 Score=63.61 Aligned_cols=73 Identities=15% Similarity=0.011 Sum_probs=47.4
Q ss_pred ccccCCCceEEEEEEECC--CceEEEEEecccchhhHHHHHHHHHHHHhcCC-CCccceeeeeecCCcCeEEeecCCCCc
Q 018816 67 ITIDEIEGYILYMGFLRD--RGPILVMKYRKSVRYASERCFNNIVFASQMNH-KSILKLIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~--~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~s 143 (350)
.| ..|-...+|+....+ +..|++|........ .-...+|+.++..+.. .-.+++++.+. -.++|||++|.+
T Consensus 5 ~l-~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 5 RF-TGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred Ec-CCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 35 788888999998764 558888876543221 1223478888888853 33444544332 248999999876
Q ss_pred hh
Q 018816 144 LA 145 (350)
Q Consensus 144 L~ 145 (350)
+.
T Consensus 79 l~ 80 (235)
T cd05157 79 LE 80 (235)
T ss_pred CC
Confidence 63
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.96 E-value=0.00013 Score=67.91 Aligned_cols=74 Identities=8% Similarity=-0.043 Sum_probs=53.6
Q ss_pred ccccCCCceEEEEEEECCC-ceEEEEEeccc-------chhhHHHHHHHHHHHHhcC---CCCccceeeeeecCCcCeEE
Q 018816 67 ITIDEIEGYILYMGFLRDR-GPILVMKYRKS-------VRYASERCFNNIVFASQMN---HKSILKLIGCCLEAEMPALV 135 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~-~~vaik~~~~~-------~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv 135 (350)
.| |.|....||++...++ +.|+||.-.+. .+...++...|...|..+. ..++++++.+ +....++|
T Consensus 33 el-ggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 33 EI-GDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred Ec-CCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 45 9999999999999766 48999985421 1234566777888888763 3457777776 44567899
Q ss_pred eecCCCCc
Q 018816 136 YEPAGYCT 143 (350)
Q Consensus 136 ~e~~~~~s 143 (350)
||++++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.90 E-value=8.2e-05 Score=65.49 Aligned_cols=138 Identities=11% Similarity=-0.025 Sum_probs=77.4
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCCc-cceeeeeecCCcCeEEeecCCCCchhhh-
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKSI-LKLIGCCLEAEMPALVYEPAGYCTLADR- 147 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~sL~~~- 147 (350)
..|-.+.+|+.... +..+++|........-.-...+|..+++.+....+ .+++.... .++||||++|..+...
T Consensus 5 ~~G~tn~~y~~~~~-~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~~ 79 (256)
T TIGR02721 5 SGGLTNRSWRIEHP-GISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLDQ 79 (256)
T ss_pred CCcCcCCeEEEEeC-CccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccccc
Confidence 67778899988754 44788877544322211235678888888854323 34444332 3699999998765421
Q ss_pred ----------------hhCCCCCCCCCCCHHHH-HHHHHHH---------HHHHHHHHc-----cCCCCeEeeccccCce
Q 018816 148 ----------------LYGPLQTHLEPLLLTHR-LKVAMET---------ANAVAYLRF-----GFPQPVVFRNIEPWNI 196 (350)
Q Consensus 148 ----------------l~~~~~~~~~~~~~~~~-~~i~~~i---------~~~l~~LH~-----~~~~~ivH~dlkp~Ni 196 (350)
++... ....+++.... ..+..++ ...+..+-. .....++|+|+.|.||
T Consensus 80 ~~~~~~~~~la~~l~~lH~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 80 FVALDLLLELAALLHQLHSQP-RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred ccCchhHHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 11110 00012222211 1111111 111222211 1134689999999999
Q ss_pred EeCCCCceeEcccCCCcc
Q 018816 197 LFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~~~ 214 (350)
+++.++ +.|+||..+..
T Consensus 159 l~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEeCCC-CEEEeccccCc
Confidence 999877 78999997754
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.90 E-value=0.00012 Score=65.85 Aligned_cols=141 Identities=16% Similarity=0.124 Sum_probs=82.7
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--Cccceeee------eecCCcCeEEeecCCC
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--SILKLIGC------CLEAEMPALVYEPAGY 141 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~------~~~~~~~~lv~e~~~~ 141 (350)
..|....+|+....++ .+++|.... .....+..|+.++..+.+. .+.+++.. ....+..++|++|++|
T Consensus 23 ~~G~~n~~y~v~~~~~-~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G 98 (296)
T cd05153 23 SAGIENTNYFVTTDSG-RYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAG 98 (296)
T ss_pred cCccccceEEEEeCCC-cEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCC
Confidence 7777789999877665 788888764 2245567788888887432 24444432 1223456899999988
Q ss_pred Cchhh-----------h---hhCCCCCC------CCCCCHHHHH----------HHHHHHHHHHHHHHc----cCCCCeE
Q 018816 142 CTLAD-----------R---LYGPLQTH------LEPLLLTHRL----------KVAMETANAVAYLRF----GFPQPVV 187 (350)
Q Consensus 142 ~sL~~-----------~---l~~~~~~~------~~~~~~~~~~----------~i~~~i~~~l~~LH~----~~~~~iv 187 (350)
..+.. . ++...... .....|.... .....+..++.++.. ....++|
T Consensus 99 ~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 178 (296)
T cd05153 99 EHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVI 178 (296)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCC
Confidence 76532 0 11100000 0011111110 011112333444442 1235799
Q ss_pred eeccccCceEeCCCCceeEcccCCCcc
Q 018816 188 FRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 188 H~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
|+|+.|.||+++.++.+.|+||+.+..
T Consensus 179 HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 179 HADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred ccCcCcccEEEeCCceEEEeehhhhcC
Confidence 999999999999987789999987653
No 474
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.79 E-value=0.00027 Score=59.01 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=94.4
Q ss_pred CCCcccccHHHHHHHhcCcccccccccCCCc-eEEEEEEECCCceEEEEEecc---cch------------------hhH
Q 018816 44 RNPIRSFSSEDLKTAINNYSMRNITIDEIEG-YILYMGFLRDRGPILVMKYRK---SVR------------------YAS 101 (350)
Q Consensus 44 ~~~~~~~~~~~l~~~~~~f~~~~~lig~G~~-g~V~~~~~~~~~~vaik~~~~---~~~------------------~~~ 101 (350)
.+...+|+. -+.+++..+.| |.|.. |.||++...+. .+|+|.+.. ... ...
T Consensus 26 gPKL~~F~~-----h~~~I~flefL-g~g~~~~~V~kv~I~g~-~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 98 (207)
T PF13095_consen 26 GPKLEPFTH-----HGDDIEFLEFL-GHGSHDGYVFKVEIDGR-IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYA 98 (207)
T ss_pred CCCcCCcCC-----CCCcEeeeeec-CCCCceeEEEEEEECCe-EEEEEEeeccccCCCccccccccccccccchhhhhc
Confidence 345566776 23788888899 99999 99999999887 999999322 110 011
Q ss_pred HHHHHHHHHHHhcC---CCCc--cceeeeeecC------------------CcCeEEeecCCCCchhhhhhCCCCCCCCC
Q 018816 102 ERCFNNIVFASQMN---HKSI--LKLIGCCLEA------------------EMPALVYEPAGYCTLADRLYGPLQTHLEP 158 (350)
Q Consensus 102 ~~~~~E~~~l~~l~---h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 158 (350)
.-|..|.....+|+ +.++ |+++||..-. ....||.||++... .
T Consensus 99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~ 164 (207)
T PF13095_consen 99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------P 164 (207)
T ss_pred ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------c
Confidence 24778888888885 4455 9999986321 02245666654321 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCC
Q 018816 159 LLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLS 212 (350)
Q Consensus 159 ~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 212 (350)
+. ..-+.+|.+-+..+| ..+|+-+|+++.|.. .-+|+|||.+
T Consensus 165 ~~----~~~~~~~~~dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 165 LQ----IRDIPQMLRDLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred cc----hhHHHHHHHHHHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 22 334566777788899 999999999999986 3489999864
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.74 E-value=0.00031 Score=63.40 Aligned_cols=72 Identities=19% Similarity=0.087 Sum_probs=47.3
Q ss_pred cCCCceEEEEEEECC-------CceEEEEEecccchhhHHHHHHHHHHHHhcCCCC-ccceeeeeecCCcCeEEeecCCC
Q 018816 70 DEIEGYILYMGFLRD-------RGPILVMKYRKSVRYASERCFNNIVFASQMNHKS-ILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 70 g~G~~g~V~~~~~~~-------~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
..|-...+|+....+ +..+++|...... .......+|..++..+.... ..++++++.. .+|+||++|
T Consensus 7 ~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i~G 81 (302)
T cd05156 7 SGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFIPS 81 (302)
T ss_pred cCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----CchhheeCC
Confidence 667777999998754 4588888865543 22244568888888885322 3455555532 368999988
Q ss_pred Cchhh
Q 018816 142 CTLAD 146 (350)
Q Consensus 142 ~sL~~ 146 (350)
.++..
T Consensus 82 ~~l~~ 86 (302)
T cd05156 82 RTLTT 86 (302)
T ss_pred CcCCH
Confidence 76643
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.73 E-value=0.00093 Score=60.48 Aligned_cols=142 Identities=16% Similarity=0.131 Sum_probs=81.4
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--Cccceeeee------ecCCcCeEEeecCCC
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--SILKLIGCC------LEAEMPALVYEPAGY 141 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~------~~~~~~~lv~e~~~~ 141 (350)
+.|....+|+....++ .+++|...... ..+.+..|+.++..|... .+.+++... ...+..++++||++|
T Consensus 31 ~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G 107 (307)
T TIGR00938 31 AEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQG 107 (307)
T ss_pred CCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCC
Confidence 7777789999877665 68888765431 234455677777777422 244444321 123456899999988
Q ss_pred Cchhh-----------h---hhCCCCCCCC-------CCCHHHHH------------HHHHHHHHHHHHHHc----cCCC
Q 018816 142 CTLAD-----------R---LYGPLQTHLE-------PLLLTHRL------------KVAMETANAVAYLRF----GFPQ 184 (350)
Q Consensus 142 ~sL~~-----------~---l~~~~~~~~~-------~~~~~~~~------------~i~~~i~~~l~~LH~----~~~~ 184 (350)
..+.. . ++........ .-.|.... .....+...+.++.. ....
T Consensus 108 ~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~~ 187 (307)
T TIGR00938 108 LSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDLPR 187 (307)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 54321 0 1111100000 01111100 011223334555532 1247
Q ss_pred CeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 185 PVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 185 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
++||+|+.+.||+++.++.+.|+||+.+..
T Consensus 188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 188 GVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred ccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 899999999999999988778999998753
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.69 E-value=0.0016 Score=59.22 Aligned_cols=160 Identities=13% Similarity=0.092 Sum_probs=85.4
Q ss_pred ccHHHHHHHhcCccc-----ccccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--Cccce
Q 018816 50 FSSEDLKTAINNYSM-----RNITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--SILKL 122 (350)
Q Consensus 50 ~~~~~l~~~~~~f~~-----~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~ 122 (350)
++.+++...-..|.. .+.+ +.|....+|+....++ .+++|.+... ..+.+..|+.++..|... .+.+.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l-~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~ 81 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGI-AEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAP 81 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchh-ccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcc
Confidence 555555554455543 1234 6777779999987766 7888887521 223444566666665321 23333
Q ss_pred eee------eecCCcCeEEeecCCCCchh-----------hhh---hCCCCCC------CCCCCH-HHHHH---------
Q 018816 123 IGC------CLEAEMPALVYEPAGYCTLA-----------DRL---YGPLQTH------LEPLLL-THRLK--------- 166 (350)
Q Consensus 123 ~~~------~~~~~~~~lv~e~~~~~sL~-----------~~l---~~~~~~~------~~~~~~-~~~~~--------- 166 (350)
+.. ....+..++++||++|..+. ..+ +...... ...+.+ .....
T Consensus 82 i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (319)
T PRK05231 82 VARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADE 161 (319)
T ss_pred eeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChh
Confidence 321 12244578999999886432 111 1111000 001111 11111
Q ss_pred ---HHHH-HHHHHHHHHcc----CCCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 167 ---VAME-TANAVAYLRFG----FPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 167 ---i~~~-i~~~l~~LH~~----~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
...+ +...+..+... ...++||+|+.|.||+++.+...-|+||+.+..
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 162 QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 1111 11122222210 245899999999999999776668999998754
No 478
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.42 E-value=0.00029 Score=62.63 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=90.5
Q ss_pred CcccccccccCCCceEEEEEEECCCceEEEEEecccch----------------------hhHHHHHHHHHHHHhcC-CC
Q 018816 61 NYSMRNITIDEIEGYILYMGFLRDRGPILVMKYRKSVR----------------------YASERCFNNIVFASQMN-HK 117 (350)
Q Consensus 61 ~f~~~~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~----------------------~~~~~~~~E~~~l~~l~-h~ 117 (350)
-++..+.| |-|.-+.||.+-+.+|.+.++|.-.-... .++-...+|+..|+.|. |.
T Consensus 93 v~svGnqI-GVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQI-GVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhcccc-ccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 35667788 99999999999998887888775321110 01122457888888874 22
Q ss_pred -CccceeeeeecCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCce
Q 018816 118 -SILKLIGCCLEAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNI 196 (350)
Q Consensus 118 -niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Ni 196 (350)
-+...++ .+..++|||++.+..|...-+ -... ..+...+..-+.-|- .+|+||+|..-=||
T Consensus 172 fpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~--------v~d~---~~ly~~lm~~Iv~la---~~GlIHgDFNEFNi 233 (465)
T KOG2268|consen 172 FPVPKPID----HNRHCVVMELVDGYPLRQVRH--------VEDP---PTLYDDLMGLIVRLA---NHGLIHGDFNEFNI 233 (465)
T ss_pred CCCCCccc----ccceeeHHHhhcccceeeeee--------cCCh---HHHHHHHHHHHHHHH---HcCceecccchhee
Confidence 2344443 345689999998877765321 1222 234444444455555 88999999999999
Q ss_pred EeCCCCceeEcccCCC
Q 018816 197 LFQEEYAAKLFDFSLS 212 (350)
Q Consensus 197 ll~~~~~~kl~Dfg~~ 212 (350)
+++.++.++++||-..
T Consensus 234 mv~dd~~i~vIDFPQm 249 (465)
T KOG2268|consen 234 MVKDDDKIVVIDFPQM 249 (465)
T ss_pred EEecCCCEEEeechHh
Confidence 9999999999999754
No 479
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.42 E-value=0.0024 Score=56.84 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=25.8
Q ss_pred CCeEeeccccCceEeCCCCc-eeEcccCCCcc
Q 018816 184 QPVVFRNIEPWNILFQEEYA-AKLFDFSLSKS 214 (350)
Q Consensus 184 ~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~ 214 (350)
..++|+|+.|.||+++.++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997554 56999998764
No 480
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.36 E-value=4.2e-05 Score=79.73 Aligned_cols=162 Identities=9% Similarity=-0.121 Sum_probs=114.6
Q ss_pred HHHHHHHHHhcCCCCccceeeeee--cCCcCeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 018816 104 CFNNIVFASQMNHKSILKLIGCCL--EAEMPALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFG 181 (350)
Q Consensus 104 ~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~ 181 (350)
...|...++...|+++...+.=.. +....+..++|+.+|.+.+.|.++.... ..+...-+.....+.+....-+|..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~-~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEES-PDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccC-CcchhchHHHHHHHHHhccchhhhc
Confidence 344555566678999877665443 2346788999999999999997765432 2232222222233335566665543
Q ss_pred C--CCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccCCCCCCccccccCCCCccchhHHHHHHHHH
Q 018816 182 F--PQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGSLEFAAPEYLTTGYYNEKTDVYSFGKLLLV 259 (350)
Q Consensus 182 ~--~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 259 (350)
. ..--+|++||+.|.+|..+..+|++++|+.+...+... ......+++-|++|+....-.++.++|+|..|+.+|+
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s--f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS--FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred ccCCccchhhhhhhhccceecCCcccccccccccccCchHh--hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 2 34578999999999999999999999999983322211 2334457888999999888889999999999999999
Q ss_pred HHhCCCCCC
Q 018816 260 LLTGRTIGH 268 (350)
Q Consensus 260 l~tg~~p~~ 268 (350)
..-|..+|-
T Consensus 1433 rs~~n~~fi 1441 (2724)
T KOG1826|consen 1433 RSDGNAYFI 1441 (2724)
T ss_pred HhcccHHHH
Confidence 888877653
No 481
>PLN02236 choline kinase
Probab=97.34 E-value=0.0025 Score=58.59 Aligned_cols=140 Identities=15% Similarity=0.056 Sum_probs=79.3
Q ss_pred cCCCceEEEEEEECC-----CceEEEEEecccchhhHHHHHHHHHHHHhcCCCC-ccceeeeeecCCcCeEEeecCCCCc
Q 018816 70 DEIEGYILYMGFLRD-----RGPILVMKYRKSVRYASERCFNNIVFASQMNHKS-ILKLIGCCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 70 g~G~~g~V~~~~~~~-----~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~s 143 (350)
-.|-...+|+....+ +..|+++..........+ -.+|..++..+...+ -.++++.+..+ .|++|+++.+
T Consensus 45 ~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~~ 119 (344)
T PLN02236 45 KGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHART 119 (344)
T ss_pred CCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCCC
Confidence 567788999987632 247888877654332222 257888888885333 34555655332 5899998766
Q ss_pred hhhh-----------------hhCCCCCCCC-CCCHHHHHHHHHHH-----------------HHHHHHH----Hc-cCC
Q 018816 144 LADR-----------------LYGPLQTHLE-PLLLTHRLKVAMET-----------------ANAVAYL----RF-GFP 183 (350)
Q Consensus 144 L~~~-----------------l~~~~~~~~~-~~~~~~~~~i~~~i-----------------~~~l~~L----H~-~~~ 183 (350)
+... ++...-.... ...+.....+..++ ...+..| .. ...
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 6421 1111000000 11122222332111 1112122 11 224
Q ss_pred CCeEeeccccCceEeCC-CCceeEcccCCCcc
Q 018816 184 QPVVFRNIEPWNILFQE-EYAAKLFDFSLSKS 214 (350)
Q Consensus 184 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 214 (350)
..++|+|+++.||++++ ++.+.++||..+..
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 57999999999999986 46899999987754
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.30 E-value=0.0038 Score=57.10 Aligned_cols=77 Identities=9% Similarity=0.024 Sum_probs=50.9
Q ss_pred cCCCceEEEEEEECCC-ceEEEEEeccc-------chhhHHHHHHHHHHHHhcC--CC-CccceeeeeecCCcCeEEeec
Q 018816 70 DEIEGYILYMGFLRDR-GPILVMKYRKS-------VRYASERCFNNIVFASQMN--HK-SILKLIGCCLEAEMPALVYEP 138 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~-~~vaik~~~~~-------~~~~~~~~~~E~~~l~~l~--h~-niv~~~~~~~~~~~~~lv~e~ 138 (350)
|.|....||++...++ +.|+||.-.+. .+...++..-|...|.... -| .+++++.+ +.....+|||+
T Consensus 4 gdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vMEd 81 (370)
T TIGR01767 4 GDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVMED 81 (370)
T ss_pred CCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehHhh
Confidence 9999999999998654 58999985432 2334456667878877663 24 45555554 55566799999
Q ss_pred CCCC-chhhhh
Q 018816 139 AGYC-TLADRL 148 (350)
Q Consensus 139 ~~~~-sL~~~l 148 (350)
++.. .|...+
T Consensus 82 L~~~~ilR~~L 92 (370)
T TIGR01767 82 LSHHKIARKGL 92 (370)
T ss_pred CccchHHHHHH
Confidence 8543 343433
No 483
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=97.17 E-value=0.002 Score=54.34 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=90.7
Q ss_pred CCceEEEEEEECCCceEEEEEecccchh-hHHHHHHHHHHHHhcCCCCccceeeeeecCCcCeEEeecCCCCchhhhhhC
Q 018816 72 IEGYILYMGFLRDRGPILVMKYRKSVRY-ASERCFNNIVFASQMNHKSILKLIGCCLEAEMPALVYEPAGYCTLADRLYG 150 (350)
Q Consensus 72 G~~g~V~~~~~~~~~~vaik~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 150 (350)
++.++.-.+..+-| +..+|++....-. ...-|.++..+++++. .|+++..= +.-..-++.|.|-..
T Consensus 73 ~gNsTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~-------- 139 (308)
T PF07387_consen 73 NGNSTLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI-------- 139 (308)
T ss_pred CCceEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc--------
Confidence 34445555555444 7788887665433 4455778888888774 45665521 233456788877321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccCCCCCccccccccccC
Q 018816 151 PLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIPEGKTHIKASTAIGS 230 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt 230 (350)
.....-.+..+ +.+|.-.|+. +.+.+|+|..|+||+-|+.|.+||.|=+.--. .+
T Consensus 140 ---------~i~~~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--------------~~ 194 (308)
T PF07387_consen 140 ---------KINFSNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--------------NQ 194 (308)
T ss_pred ---------ccchhHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh--------------he
Confidence 11111112222 3567778865 67899999999999999999999999663210 11
Q ss_pred CCCCCccccccCCCCccchhHHHHHHHHHHHhC
Q 018816 231 LEFAAPEYLTTGYYNEKTDVYSFGKLLLVLLTG 263 (350)
Q Consensus 231 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg 263 (350)
.-|.--| ....|+++.+-+|-.-++++...
T Consensus 195 V~~vN~~---Y~~lT~~aE~~~fv~s~l~~v~~ 224 (308)
T PF07387_consen 195 VNMVNIE---YESLTQEAEVKVFVKSCLKLVEK 224 (308)
T ss_pred eeEEeee---ccccChHHHHHHHHHHHHHHHHH
Confidence 1122211 12346677777777666766653
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.11 E-value=0.01 Score=53.47 Aligned_cols=129 Identities=14% Similarity=0.035 Sum_probs=78.1
Q ss_pred EEEEEEECCCceEEEEEecc--cchhhHHHHHHHHHHHHhcC--CCCccceeeeeecCC--cCeEEeecCCCCchhhhhh
Q 018816 76 ILYMGFLRDRGPILVMKYRK--SVRYASERCFNNIVFASQMN--HKSILKLIGCCLEAE--MPALVYEPAGYCTLADRLY 149 (350)
Q Consensus 76 ~V~~~~~~~~~~vaik~~~~--~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~ 149 (350)
.+|..... +..+++. ... ..........+|..+++.+. -.-+...+++|.++. ..+.||+|++|..+.+.+.
T Consensus 40 ~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~ 117 (321)
T COG3173 40 DTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALP 117 (321)
T ss_pred ceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCC
Confidence 44444334 4466666 221 12234456678888888774 344566677777766 7899999998854433221
Q ss_pred CCCCCCCCCCCHHHHHHHH-HHHHHHHHHHH-------------------------------------------------
Q 018816 150 GPLQTHLEPLLLTHRLKVA-METANAVAYLR------------------------------------------------- 179 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~i~-~~i~~~l~~LH------------------------------------------------- 179 (350)
.. +.. .+++ ..++..|.-||
T Consensus 118 ~~--------~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl 187 (321)
T COG3173 118 PE--------SLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWL 187 (321)
T ss_pred cc--------cch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHH
Confidence 10 000 1111 23333333333
Q ss_pred -cc-----CCCCeEeeccccCceEeCCCCceeEcccCCCccCC
Q 018816 180 -FG-----FPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSIP 216 (350)
Q Consensus 180 -~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 216 (350)
.. ....++|+|+.+.|++++...-+=|+||+.+..-.
T Consensus 188 ~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 188 EANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred HhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 11 13469999999999999999889999999987643
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.10 E-value=0.0096 Score=55.47 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=52.5
Q ss_pred ccccCCCceEEEEEEECCCceEEEEEecccc-------hhhHHHHHHHHHHHHhcC---CCCccceeeeeecCCcCeEEe
Q 018816 67 ITIDEIEGYILYMGFLRDRGPILVMKYRKSV-------RYASERCFNNIVFASQMN---HKSILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~ 136 (350)
.+ |.|....||+....+ +.++||.-.... +-...+...|...|..+. ..++.+++.++.+ ..+++|
T Consensus 39 ei-ggGn~N~VyrV~~~~-~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlvM 114 (418)
T PLN02756 39 EV-GDGNLNFVYIVVSSS-GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIGM 114 (418)
T ss_pred Ec-CCCceeeEEEEEcCC-ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEEE
Confidence 45 999999999988754 479999865221 113444555677776553 3578888888774 457899
Q ss_pred ecCCC--Cchhhhh
Q 018816 137 EPAGY--CTLADRL 148 (350)
Q Consensus 137 e~~~~--~sL~~~l 148 (350)
|++++ ..+.+-+
T Consensus 115 E~L~~~~~ilr~~L 128 (418)
T PLN02756 115 RYLEPPHIILRKGL 128 (418)
T ss_pred eecCCcceehhhhh
Confidence 99976 3444433
No 486
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.09 E-value=0.0087 Score=54.40 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=91.0
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccch----------------------hhH----HHHHHHHHHHHhcCCCCcccee
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVR----------------------YAS----ERCFNNIVFASQMNHKSILKLI 123 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~----------------------~~~----~~~~~E~~~l~~l~h~niv~~~ 123 (350)
..|--+.||.+.-.+|..+|||.+..+-- ..+ --...|+.-|.+|....|...-
T Consensus 153 STGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~Pe 232 (520)
T KOG2270|consen 153 STGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCPE 232 (520)
T ss_pred ccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 88888999999998888999998764310 001 1134677778887655542211
Q ss_pred eeeecCCcCeEEeecCCCCchhh-hhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCC
Q 018816 124 GCCLEAEMPALVYEPAGYCTLAD-RLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEY 202 (350)
Q Consensus 124 ~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~ 202 (350)
-... ....|||+|+....-.. .|.+ ..++...+..+-.+++.-+.-|.. .-++||.||+--|+|+ .+|
T Consensus 233 PIlL--k~hVLVM~FlGrdgw~aPkLKd------~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~Ly-hdG 301 (520)
T KOG2270|consen 233 PILL--KNHVLVMEFLGRDGWAAPKLKD------ASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNLLY-HDG 301 (520)
T ss_pred ceee--ecceEeeeeccCCCCcCccccc------ccCChHHHHHHHHHHHHHHHHHHH--HhceeccchhhhhheE-ECC
Confidence 1111 13369999995322111 1111 356677777788888888877775 3479999999999998 567
Q ss_pred ceeEcccCCCccCCC
Q 018816 203 AAKLFDFSLSKSIPE 217 (350)
Q Consensus 203 ~~kl~Dfg~~~~~~~ 217 (350)
.+.++|.+.+.....
T Consensus 302 ~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 302 KLYIIDVSQSVEHDH 316 (520)
T ss_pred EEEEEEccccccCCC
Confidence 899999988765543
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.03 E-value=0.0099 Score=53.78 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=26.0
Q ss_pred CCCeEeeccccCceEeCCCCceeEcccCCCc
Q 018816 183 PQPVVFRNIEPWNILFQEEYAAKLFDFSLSK 213 (350)
Q Consensus 183 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 213 (350)
..+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 468999999999999988 668999998654
No 488
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.02 E-value=0.0044 Score=57.39 Aligned_cols=72 Identities=8% Similarity=-0.016 Sum_probs=50.3
Q ss_pred ccccCCCceEEEEEEEC-CCceEEEEEeccc------chhhHHHHHHHHHHHHhcC--CC-CccceeeeeecCCcCeEEe
Q 018816 67 ITIDEIEGYILYMGFLR-DRGPILVMKYRKS------VRYASERCFNNIVFASQMN--HK-SILKLIGCCLEAEMPALVY 136 (350)
Q Consensus 67 ~lig~G~~g~V~~~~~~-~~~~vaik~~~~~------~~~~~~~~~~E~~~l~~l~--h~-niv~~~~~~~~~~~~~lv~ 136 (350)
.| |.|.-.-||++.+. +++.|+||.-.+. .+...++..-|...|+.+. -| .+++++.+ +.....+||
T Consensus 36 ei-gdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~vM 112 (409)
T PRK12396 36 EI-GDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCVM 112 (409)
T ss_pred Ec-CCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHHH
Confidence 45 99999999999984 3558999985332 2344567777888887663 24 45666655 555667899
Q ss_pred ecCCC
Q 018816 137 EPAGY 141 (350)
Q Consensus 137 e~~~~ 141 (350)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 98854
No 489
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.00 E-value=0.01 Score=54.35 Aligned_cols=141 Identities=13% Similarity=0.084 Sum_probs=76.9
Q ss_pred cCCCceEEEEEEECC----CceEEEEEecccchhhHHHHHHHHHHHHhcCCCCc-cceeeeeecCCcCeEEeecCCCCch
Q 018816 70 DEIEGYILYMGFLRD----RGPILVMKYRKSVRYASERCFNNIVFASQMNHKSI-LKLIGCCLEAEMPALVYEPAGYCTL 144 (350)
Q Consensus 70 g~G~~g~V~~~~~~~----~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~sL 144 (350)
..|-...+|+....+ +..|+++........ .-.-.+|..+++.+..-++ .++++++..+ +|.+|+++.+|
T Consensus 23 ~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g~~l 97 (330)
T PLN02421 23 SGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINARTL 97 (330)
T ss_pred CCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcCCCC
Confidence 557777899887633 237888877654322 1223478888888864443 4556555322 58899877655
Q ss_pred hhh-----------------hhCCCCCCCCCC-CHHHHHHHHHHH----------------------HHHHHHHHc----
Q 018816 145 ADR-----------------LYGPLQTHLEPL-LLTHRLKVAMET----------------------ANAVAYLRF---- 180 (350)
Q Consensus 145 ~~~-----------------l~~~~~~~~~~~-~~~~~~~i~~~i----------------------~~~l~~LH~---- 180 (350)
..- ++...-...... .+....++..++ ..-+..+..
T Consensus 98 ~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 177 (330)
T PLN02421 98 TPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEITDS 177 (330)
T ss_pred ChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHhcc
Confidence 321 111100000001 122222222221 111111111
Q ss_pred -cCCCCeEeeccccCceEeCC-CCceeEcccCCCccC
Q 018816 181 -GFPQPVVFRNIEPWNILFQE-EYAAKLFDFSLSKSI 215 (350)
Q Consensus 181 -~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 215 (350)
....-++|+|+.+.|||++. ++.++++||..|...
T Consensus 178 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 178 LKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred CCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 11234899999999999974 578999999987543
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.79 E-value=0.016 Score=52.54 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=28.6
Q ss_pred CCCeEeeccccCceEeCCCCceeEcccCCCcc
Q 018816 183 PQPVVFRNIEPWNILFQEEYAAKLFDFSLSKS 214 (350)
Q Consensus 183 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 214 (350)
..++||+|+.+.|+|++.++.+-++||..++.
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45899999999999999999999999987764
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.70 E-value=0.024 Score=50.57 Aligned_cols=72 Identities=11% Similarity=-0.081 Sum_probs=46.1
Q ss_pred cccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcC---CCCccceeeeeecCCcCeEEeecCCCC
Q 018816 66 NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMN---HKSILKLIGCCLEAEMPALVYEPAGYC 142 (350)
Q Consensus 66 ~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~ 142 (350)
..+ +.|....+|+.. .+++.+.+|.-.. .....|..|..-|+.|. .-.+.+++++....+..+|||||++.+
T Consensus 23 ~~v-~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 23 EPV-SGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEE---SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred Eec-CCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 345 889999999987 5555899998763 23455778888888773 455778888887777789999998766
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.68 E-value=0.015 Score=49.53 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=22.1
Q ss_pred CCeEeeccccCceEe-CCCCceeEcccCCCcc
Q 018816 184 QPVVFRNIEPWNILF-QEEYAAKLFDFSLSKS 214 (350)
Q Consensus 184 ~~ivH~dlkp~Nill-~~~~~~kl~Dfg~~~~ 214 (350)
..++|+|+.|.|||+ +.++.++++||..|..
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 568999999999999 8899999999998753
No 493
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.58 E-value=0.0082 Score=55.25 Aligned_cols=61 Identities=18% Similarity=0.026 Sum_probs=44.0
Q ss_pred CeEEeecCCCCchhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCC
Q 018816 132 PALVYEPAGYCTLADRLYGPLQTHLEPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQE 200 (350)
Q Consensus 132 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~ 200 (350)
..++-+|.+|.++..++... ..++.-..+++.-.++|+.-+-- -.+++|.|+.|.||++--
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~------~~pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK------SQPEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhhcc------cChHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEe
Confidence 34666788888998888542 34445666777777777655442 568999999999999953
No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.24 E-value=0.32 Score=44.39 Aligned_cols=97 Identities=11% Similarity=0.185 Sum_probs=56.6
Q ss_pred CCcccccHHHHHHHhcCcccc---c-ccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCC--C
Q 018816 45 NPIRSFSSEDLKTAINNYSMR---N-ITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHK--S 118 (350)
Q Consensus 45 ~~~~~~~~~~l~~~~~~f~~~---~-~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~--n 118 (350)
.+...++.+.+..+...+... . .. -.+.-..||+....++..+++|...... .....+..|+..+..|... .
T Consensus 6 ~~~~~l~p~~~~~a~~~~g~~~~~~~~~-l~s~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gip 83 (325)
T PRK11768 6 FPFQTLTPDLILDALESLGLRVDGRLLA-LNSYENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIP 83 (325)
T ss_pred CCCCCCChHHHHHHHHHcCCCCccceEe-eccccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCC
Confidence 345567777777666555321 1 11 2334568999988777688888875432 2345666788777776321 1
Q ss_pred cccee---e--eeecCCcCeEEeecCCCCc
Q 018816 119 ILKLI---G--CCLEAEMPALVYEPAGYCT 143 (350)
Q Consensus 119 iv~~~---~--~~~~~~~~~lv~e~~~~~s 143 (350)
++... | ....++..+.++++++|..
T Consensus 84 v~~p~~~~G~~~~~~~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 84 VVAPLAFNGQTLHEHQGFRFALFPRRGGRA 113 (325)
T ss_pred CCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence 22221 1 1122345678889887754
No 495
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.20 E-value=0.011 Score=56.01 Aligned_cols=50 Identities=16% Similarity=0.186 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhcCCCCccceeeeeecC-CcCeEEeecCCCCchhhhhhCC
Q 018816 101 SERCFNNIVFASQMNHKSILKLIGCCLEA-EMPALVYEPAGYCTLADRLYGP 151 (350)
Q Consensus 101 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~ 151 (350)
...+..-...++.++|+|...++++-... ....+|+|++ +.||++.+...
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~ 76 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG 76 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence 34566677888999999999998876543 3578899999 67999987543
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.09 E-value=0.075 Score=48.41 Aligned_cols=139 Identities=16% Similarity=0.160 Sum_probs=80.2
Q ss_pred CceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcCCCC------ccceeee----eecCCcCeEEeecCCCC
Q 018816 73 EGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMNHKS------ILKLIGC----CLEAEMPALVYEPAGYC 142 (350)
Q Consensus 73 ~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~----~~~~~~~~lv~e~~~~~ 142 (350)
.-..+|+....++ .+++|..... ....++..|+..+..|.-.. +...=|- ...+...+-+++|++|.
T Consensus 37 ~eN~~f~~~~~~g-~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQTEDG-RYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEecCC-CeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence 4558899999887 4577777665 34566777888888773211 2222121 11123667889999988
Q ss_pred chhh-h--------------hhCCCCCC-------CCCCCHH----H---------HHHHHHHHHHHHHHHHcc-----C
Q 018816 143 TLAD-R--------------LYGPLQTH-------LEPLLLT----H---------RLKVAMETANAVAYLRFG-----F 182 (350)
Q Consensus 143 sL~~-~--------------l~~~~~~~-------~~~~~~~----~---------~~~i~~~i~~~l~~LH~~-----~ 182 (350)
.+.. . ++...... .....|. . ......++...+..+... .
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 7773 1 11000000 0112222 0 111233444444444421 1
Q ss_pred CCC--eEeeccccCceEeCCCCc-eeEcccCCCcc
Q 018816 183 PQP--VVFRNIEPWNILFQEEYA-AKLFDFSLSKS 214 (350)
Q Consensus 183 ~~~--ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~ 214 (350)
..+ +||+|+.|.||+++.+.. +.++||+.+..
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred cccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 233 999999999999998874 89999997753
No 497
>PTZ00384 choline kinase; Provisional
Probab=95.95 E-value=0.079 Score=49.41 Aligned_cols=71 Identities=14% Similarity=-0.011 Sum_probs=42.3
Q ss_pred cCCCceEEEEEEECCC--ce-----EEEEEecccchhhHHHHHHHHHHHHhcCCCC-ccceeeeeecCCcCeEEeecCCC
Q 018816 70 DEIEGYILYMGFLRDR--GP-----ILVMKYRKSVRYASERCFNNIVFASQMNHKS-ILKLIGCCLEAEMPALVYEPAGY 141 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~--~~-----vaik~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~ 141 (350)
..|-...+|++...++ .. |++...-...... -+-.+|+.+++.+...+ -.++++.+.. .+|.||++|
T Consensus 59 ~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~-IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efIeG 133 (383)
T PTZ00384 59 NNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLV-IDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWVEG 133 (383)
T ss_pred CCcccceEEEEEecCCCCCccccceEEEEeccCCCceE-eccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEecc
Confidence 5677889999986432 12 3333322211111 12246888999986444 4556665543 599999998
Q ss_pred Cchh
Q 018816 142 CTLA 145 (350)
Q Consensus 142 ~sL~ 145 (350)
-+|.
T Consensus 134 r~l~ 137 (383)
T PTZ00384 134 NTMG 137 (383)
T ss_pred ccCC
Confidence 7764
No 498
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.91 E-value=0.016 Score=52.59 Aligned_cols=56 Identities=25% Similarity=0.221 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEeeccccCceEeCCCCceeEcccCCCccC
Q 018816 157 EPLLLTHRLKVAMETANAVAYLRFGFPQPVVFRNIEPWNILFQEEYAAKLFDFSLSKSI 215 (350)
Q Consensus 157 ~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 215 (350)
..-.+.+...++.+.+..+.-+.. ...+-|||+.-.||||+ +|++.|+||-+++.-
T Consensus 316 k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 316 KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeecc
Confidence 345688899999998888888874 56889999999999999 999999999999843
No 499
>PRK06148 hypothetical protein; Provisional
Probab=95.42 E-value=0.16 Score=53.56 Aligned_cols=162 Identities=14% Similarity=0.129 Sum_probs=84.4
Q ss_pred ccccHHHHHHH-hcCcccc---cccccCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHHHHHHhcC-------C
Q 018816 48 RSFSSEDLKTA-INNYSMR---NITIDEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNIVFASQMN-------H 116 (350)
Q Consensus 48 ~~~~~~~l~~~-~~~f~~~---~~lig~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~~~l~~l~-------h 116 (350)
..++.+++... .+.|... ..| ++ ..-.+|+....++..+++|..+... .......|...|..|. -
T Consensus 9 p~~s~~~~~~~~~~~ygl~~~~~~L-~s-~~d~nf~v~~~~g~~yVLKi~~~~~--~~~~~~~q~~~L~hL~~~~~glpv 84 (1013)
T PRK06148 9 PEFTTKDAEALLAQHFGISATATPL-DG-ERDLNFRLTTDDGADYILKIVNPSE--PRVESDFQTAALDHLAAVAPDLPV 84 (1013)
T ss_pred CCCCHHHHHHHHHHHcCCceEEeec-CC-cCCceEEEEeCCCCeEEEEEcCCcc--chhHHHHHHHHHHHHHhhCCCCCc
Confidence 34555555332 2334322 234 43 4577899888777789999987653 2333444556665552 2
Q ss_pred CCcccee-e----eeec-CC--cCeEEeecCCCCchhhhh-----------------hCCCCC--C---CCCCCHH----
Q 018816 117 KSILKLI-G----CCLE-AE--MPALVYEPAGYCTLADRL-----------------YGPLQT--H---LEPLLLT---- 162 (350)
Q Consensus 117 ~niv~~~-~----~~~~-~~--~~~lv~e~~~~~sL~~~l-----------------~~~~~~--~---~~~~~~~---- 162 (350)
|.++.-. | .... ++ ..+-+++|++|..+.+.. +..... + ...+.|.
T Consensus 85 P~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~ 164 (1013)
T PRK06148 85 PRLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHA 164 (1013)
T ss_pred CeeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccc
Confidence 2323221 1 1111 12 356789999987765411 000000 0 0111121
Q ss_pred -------------HHHHHHHHHHHHHH-----HHHccCCCCeEeeccccCceEeCCCC--ce-eEcccCCCcc
Q 018816 163 -------------HRLKVAMETANAVA-----YLRFGFPQPVVFRNIEPWNILFQEEY--AA-KLFDFSLSKS 214 (350)
Q Consensus 163 -------------~~~~i~~~i~~~l~-----~LH~~~~~~ivH~dlkp~Nill~~~~--~~-kl~Dfg~~~~ 214 (350)
....++.++..... .+.. ...++||+|+.+.|||++.++ .+ -|+|||.+..
T Consensus 165 ~~l~~~l~~i~d~~~r~~l~~~~~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 165 GRARDRLHFIDDPEDRALVERFLARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred hhhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 11222223332221 1221 246799999999999999875 45 4999998764
No 500
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.02 E-value=0.15 Score=44.51 Aligned_cols=72 Identities=14% Similarity=0.016 Sum_probs=52.1
Q ss_pred cCCCceEEEEEEECCCceEEEEEecccchhhHHHHHHHH---HHHHhcCCCCccceeeeeecCCcCeEEeecC-CCCchh
Q 018816 70 DEIEGYILYMGFLRDRGPILVMKYRKSVRYASERCFNNI---VFASQMNHKSILKLIGCCLEAEMPALVYEPA-GYCTLA 145 (350)
Q Consensus 70 g~G~~g~V~~~~~~~~~~vaik~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~-~~~sL~ 145 (350)
..|..+.|+.++..+|.+.++|...+... ...|. ..|+..+-...|++++.- .....+++|.+ ++.+|.
T Consensus 11 ~~g~~s~V~pv~~~dG~~avLKl~~p~~~-----~~~E~~g~~~L~~w~G~GaVrll~~d--~~~~AlLLErl~~g~~L~ 83 (253)
T PF04655_consen 11 AHGSSSLVVPVRRADGTPAVLKLAPPHAE-----AEHEARGEAALRWWNGRGAVRLLAAD--PERGALLLERLDPGRSLA 83 (253)
T ss_pred CCCcceEEEEEEcCCCCeEEEEecCCccc-----chhhhhHHhHhheeCCCCceeeeccc--cccchhhhhhccCCCchh
Confidence 67889999999998888999998875432 12233 457777777888999874 34557888988 555776
Q ss_pred hhh
Q 018816 146 DRL 148 (350)
Q Consensus 146 ~~l 148 (350)
+..
T Consensus 84 ~~~ 86 (253)
T PF04655_consen 84 SLP 86 (253)
T ss_pred hcc
Confidence 554
Done!