Query 018817
Match_columns 350
No_of_seqs 168 out of 1328
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:30:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018817.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018817hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.9E-81 9.9E-86 595.8 26.4 328 2-333 5-348 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 4.2E-74 1.4E-78 538.5 21.2 298 36-343 2-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.1E-73 7.3E-78 533.3 25.9 286 35-329 4-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 1.8E-70 6.1E-75 517.3 23.5 282 35-330 6-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 6.2E-70 2.1E-74 509.2 18.2 277 35-329 2-304 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-64 4.2E-69 466.4 23.8 260 36-329 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 94.6 0.083 2.8E-06 46.6 7.3 106 166-292 73-195 (243)
8 2hbt_A EGL nine homolog 1; pro 94.5 0.51 1.7E-05 41.5 12.3 185 56-292 14-213 (247)
9 2rg4_A Uncharacterized protein 92.6 1 3.5E-05 38.7 10.7 43 240-294 166-209 (216)
10 2jig_A Prolyl-4 hydroxylase; h 77.3 6.2 0.00021 33.7 7.3 48 242-293 170-218 (224)
11 2iuw_A Alkylated repair protei 75.0 5.1 0.00018 34.8 6.1 83 197-291 128-229 (238)
12 3itq_A Prolyl 4-hydroxylase, a 74.5 8.2 0.00028 33.0 7.1 85 196-292 112-212 (216)
13 3tht_A Alkylated DNA repair pr 74.4 2.2 7.4E-05 39.5 3.6 92 196-294 199-315 (345)
14 3s57_A Alpha-ketoglutarate-dep 71.8 5.4 0.00019 33.8 5.3 79 197-289 102-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 71.3 16 0.00055 31.0 8.2 78 197-290 107-201 (211)
16 3o2g_A Gamma-butyrobetaine dio 52.2 6.5 0.00022 36.8 2.3 52 37-96 122-173 (388)
17 2dbn_A Hypothetical protein YB 47.8 11 0.00036 36.0 3.0 54 35-95 98-151 (461)
18 1otj_A Alpha-ketoglutarate-dep 40.0 26 0.00088 30.7 4.2 49 36-93 16-64 (283)
19 2opi_A L-fuculose-1-phosphate 37.4 19 0.00064 30.4 2.7 49 37-91 125-175 (212)
20 4ay7_A Methylcobalamin\: coenz 33.6 78 0.0027 28.6 6.5 47 46-95 298-348 (348)
21 1oih_A Putative alkylsulfatase 32.3 41 0.0014 29.8 4.3 51 36-95 26-77 (301)
22 2fk5_A Fuculose-1-phosphate al 31.2 24 0.00083 29.5 2.4 50 37-92 117-175 (200)
23 1e4c_P L-fuculose 1-phosphate 30.5 27 0.00094 29.4 2.6 49 37-91 122-172 (215)
24 1e5r_A Proline oxidase; oxidor 29.3 35 0.0012 30.4 3.2 63 213-290 103-175 (290)
25 1m5a_B Insulin B chain; alpha 29.1 58 0.002 18.4 2.9 18 56-73 10-27 (30)
26 3pvj_A Alpha-ketoglutarate-dep 29.1 38 0.0013 29.8 3.4 49 36-93 14-62 (277)
27 3r1j_A Alpha-ketoglutarate-dep 28.6 59 0.002 29.0 4.6 51 36-95 20-71 (301)
28 1otf_A 4-oxalocrotonate tautom 28.4 44 0.0015 21.4 2.9 29 39-67 1-29 (62)
29 2opa_A Probable tautomerase YW 27.7 46 0.0016 21.2 2.9 29 39-67 1-29 (61)
30 3ghf_A Septum site-determining 27.3 79 0.0027 24.0 4.5 37 39-81 50-86 (120)
31 3m20_A 4-oxalocrotonate tautom 26.6 69 0.0024 20.7 3.6 28 39-67 1-28 (62)
32 1pvt_A Sugar-phosphate aldolas 26.5 39 0.0013 28.9 3.0 50 37-92 161-212 (238)
33 2da7_A Zinc finger homeobox pr 26.5 34 0.0011 23.6 2.0 40 148-187 14-53 (71)
34 3rcq_A Aspartyl/asparaginyl be 24.5 1.1E+02 0.0038 25.5 5.3 67 212-294 113-186 (197)
35 2v9l_A Rhamnulose-1-phosphate 23.1 41 0.0014 29.6 2.5 50 37-92 179-230 (274)
36 2z7b_A MLR6791 protein; class 22.6 64 0.0022 28.3 3.6 52 37-92 157-217 (270)
37 3ry0_A Putative tautomerase; o 22.4 65 0.0022 21.0 2.9 29 39-67 1-29 (65)
38 2x4k_A 4-oxalocrotonate tautom 22.2 64 0.0022 20.4 2.8 29 39-67 4-32 (63)
39 2irp_A Putative aldolase class 21.8 39 0.0013 28.2 2.0 49 37-92 139-192 (208)
40 1gyx_A YDCE, B1461, hypothetic 21.2 83 0.0029 21.3 3.3 45 39-83 1-51 (76)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.9e-81 Score=595.83 Aligned_cols=328 Identities=32% Similarity=0.570 Sum_probs=295.4
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCCCCCCCC---C----CCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 018817 2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCIN---S----EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI 74 (350)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~---~----~~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~ 74 (350)
.+||+|+++| +.+||++|+||+++++.... . ...+||||||+.|.+++++.|.+++++|.+||++||||||+
T Consensus 5 ~~v~~l~~~~-~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~ 83 (356)
T 1gp6_A 5 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI 83 (356)
T ss_dssp CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred ccHHHHHhcC-CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence 5799999998 99999999999877765322 1 13479999999998778878999999999999999999999
Q ss_pred eCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCC-CCceecccccccCCCcccchhhcccccccC-----CCCCCCCCc
Q 018817 75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPL 148 (350)
Q Consensus 75 nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~~ 148 (350)
||||+.++++++++.+++||+||.|+|+++..... ..+.||+........+..||+|.|.++..| .+.||+.++
T Consensus 84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS 163 (356)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence 99999999999999999999999999999966544 567899876544556788999999887644 345999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccC--CcccceeccccCCCCCCCccccCCCcccCCceeEE
Q 018817 149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLET--DSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTIL 226 (350)
Q Consensus 149 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~--~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll 226 (350)
+||+.+++|+++|.+++.+||++|+++||+++++|.+.+ .. .+.+.||++||||++.++..+|+++|||+|+||||
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEV--GGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHT--THHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh--cccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 999999999999999999999999999999999999988 31 25678999999999988888999999999999999
Q ss_pred eeCCCCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCCCCCc-eeecCcccc
Q 018817 227 MQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDT-VVGPAQDLL 305 (350)
Q Consensus 227 ~q~~~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p~~d~-~i~pl~~~~ 305 (350)
+||.++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|+ +|.|+++++
T Consensus 242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~ 321 (356)
T 1gp6_A 242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV 321 (356)
T ss_dssp EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence 9999999999999999999999999999999999999999999999999998888999999999999999 999999999
Q ss_pred CCCCCCCCCCCcCHHHHHHHHHHccCCC
Q 018817 306 DNENRPPLYRGIKYREYLQLQQSNQLNG 333 (350)
Q Consensus 306 ~~~~~~~~y~~~~~~e~~~~~~~~~~~~ 333 (350)
++ ++|++|+++|++||+..++..++.+
T Consensus 322 ~~-~~p~~y~~~t~~eyl~~~~~~~~d~ 348 (356)
T 1gp6_A 322 SV-ESPAKFPPRTFAQHIEHKLFGKEQE 348 (356)
T ss_dssp CS-SSCCSSCCEEHHHHHHHHHHHHHHH
T ss_pred CC-CCCccCCCccHHHHHHHHHHhccCc
Confidence 98 8899999999999999887765533
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.2e-74 Score=538.55 Aligned_cols=298 Identities=31% Similarity=0.579 Sum_probs=260.9
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCCCCceec
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW 115 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy 115 (350)
++||||||+.+. +++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||
T Consensus 2 ~~iPvIDls~l~---~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy 74 (319)
T 1w9y_A 2 ENFPIISLDKVN---GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKAL 74 (319)
T ss_dssp CCCCEEEGGGGG---STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred CCCCEEECcccC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCC
Confidence 379999999985 235778999999999999999999999999999999999999999999999998532 2366
Q ss_pred ccccccCCCcccchhhcccccccC---CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccCC
Q 018817 116 GTSFNVNVDKTLFWRDYLKIHVHP---QFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETD 192 (350)
Q Consensus 116 ~~~~~~~~~~~~d~~e~~~~~~~p---~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~ 192 (350)
+... ...+..||+|.|.+...| .+.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+.....
T Consensus 75 ~~~~--~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 75 EGVQ--AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp TTCC--CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred Cccc--ccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 5432 123567999999887654 34599999999999999999999999999999999999999999998821112
Q ss_pred cccceeccccCCCCCCCccccCCCcccCCceeEEeeC-CCCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccc
Q 018817 193 SHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQN-DHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSV 271 (350)
Q Consensus 193 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q~-~~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~ 271 (350)
+.+.+|++|||||+.++...|+++|||+|+||||+|| .++||||+.+|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~ 232 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSV 232 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecc
Confidence 5578999999999988888999999999999999995 799999988999999999999999999999999999999999
Q ss_pred cceeecCCCCceeEEEEeeCCCCCceeecCccccCCCC---CCCCCCCcCHHHHHHHHHHccCCCCcc-ccccccc
Q 018817 272 LHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNEN---RPPLYRGIKYREYLQLQQSNQLNGKSC-LDHVKVN 343 (350)
Q Consensus 272 ~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~~~~~~-l~~~~i~ 343 (350)
+|||+.++.++|||++||++|+.|++|.|+++++++ + +|++|+++|++||++.+++..+.++.. ++.+||.
T Consensus 233 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~-~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 233 MHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEK-EAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp CEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC---------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred cceecCCCCCCceEEEEEecCCCCCeEeCchhhcCc-ccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 999999888899999999999999999999999987 6 599999999999999998888877665 6777764
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.1e-73 Score=533.30 Aligned_cols=286 Identities=23% Similarity=0.384 Sum_probs=253.3
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCCCCcee
Q 018817 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR 114 (350)
Q Consensus 35 ~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~G 114 (350)
..+||||||+.+.+ +|.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ...++|
T Consensus 4 ~~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARG 78 (312)
T ss_dssp CCSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSE
T ss_pred CCCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccc
Confidence 35899999998752 5678999999999999999999999999999999999999999999999999654 445678
Q ss_pred ccccccc--CCCcccchhhccccccc-----------CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 018817 115 WGTSFNV--NVDKTLFWRDYLKIHVH-----------PQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEES 181 (350)
Q Consensus 115 y~~~~~~--~~~~~~d~~e~~~~~~~-----------p~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~ 181 (350)
|...... ......||+|.|.++.. +++.||+.+|+||+.+++|+++|.+++.+||++|+++||++++
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 8533211 22356899999987531 2456999899999999999999999999999999999999999
Q ss_pred HHHHhhcccCCcccceeccccCCCCCCCccccCCCcccCCceeEEeeCCCCCccccc-CCceEecCCCCCcEEEEecchh
Q 018817 182 YIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHM 260 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q~~~~GLqv~~-~g~W~~V~~~~g~~iVn~Gd~l 260 (350)
+|.+.+ . .+.+.+|++||||++.++..+|+++|||+|+||||+||.++||||+. +|+|++|+|.||++|||+||+|
T Consensus 159 ~f~~~~--~-~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l 235 (312)
T 3oox_A 159 FFKPTV--Q-DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDML 235 (312)
T ss_dssp TTHHHH--T-TCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHH
T ss_pred HHHHHh--c-CCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHH
Confidence 999998 6 66788999999999876556999999999999999999999999986 8999999999999999999999
Q ss_pred HHhhCCccccccceeecCC----CCceeEEEEeeCCCCCceeecCccccCCCCCCCCCC-CcCHHHHHHHHHHc
Q 018817 261 EILSNGKYKSVLHRAVVNG----KATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYR-GIKYREYLQLQQSN 329 (350)
Q Consensus 261 ~~~TnG~~~a~~HRVv~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~y~-~~~~~e~~~~~~~~ 329 (350)
|+||||+|||++|||+.++ ..+|||++||++|+.|++|.|+++++++ ++|++|+ ++|++||+..++++
T Consensus 236 ~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~-~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 236 ERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTA-ENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp HHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCS-SSCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCC-CCcccCCCCeeHHHHHHHHHHH
Confidence 9999999999999998763 4579999999999999999999999998 8999999 99999999988764
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.8e-70 Score=517.29 Aligned_cols=282 Identities=23% Similarity=0.323 Sum_probs=251.5
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH-hcCCHHHHhhHhcCCCCCce
Q 018817 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF-FDLSDEQKREYAGKKLFDPI 113 (350)
Q Consensus 35 ~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~ 113 (350)
..+||||||+.|.+++++.|.+++++|.+||+++|||||+|||| +++++++.+++| |+||.|+|+++.. .+|.
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---~Gy~ 79 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---RAYN 79 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC---TTTC
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh---cCCC
Confidence 35799999999988888889999999999999999999999999 899999999999 9999999999954 3344
Q ss_pred ecccccccCC------Ccccchhhccccccc---------------CCCCCCCC--CcchHHHHHHHHHHHHHHHHHHHH
Q 018817 114 RWGTSFNVNV------DKTLFWRDYLKIHVH---------------PQFNAPQN--PLGFSETIQEYCKRVRELANELLK 170 (350)
Q Consensus 114 Gy~~~~~~~~------~~~~d~~e~~~~~~~---------------p~~~wP~~--~~~fr~~~~~y~~~~~~la~~ll~ 170 (350)
+++.+. ... .+..||+|.|.++.. ..+.||+. +|+||+.+++|+++|.+++.+||+
T Consensus 80 ~~~~e~-~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (331)
T 1odm_A 80 KEHQDQ-VRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLK 158 (331)
T ss_dssp TTCTTC-SSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccc-cccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 443322 111 257799999988742 14569987 899999999999999999999999
Q ss_pred HHHHhcCCChHHHHHhhcccCCccccee--ccccC------C---CCCCCc-cccCCCcccCCceeEEeeCCCCCccccc
Q 018817 171 GIMESLGLEESYIQKAMDLETDSHQLLV--VNLYP------P---CPQPEV-VMGLPPHSDHGLLTILMQNDHVGLHVRH 238 (350)
Q Consensus 171 ~l~~~Lgl~~~~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~~~lTll~q~~~~GLqv~~ 238 (350)
+|+++||+++++|.+.+ . .+.+.|| ++||| | |+.++. .+|+++|||+|+||||+||.++||||++
T Consensus 159 ~la~~Lgl~~~~f~~~~--~-~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 159 GYALALGKEENFFARHF--K-PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHTTSCTTTTGGGC--C-TTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHhCCCHHHHHHHh--c-CcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 99999999999999988 6 6778999 99999 7 766665 8999999999999999999999999995
Q ss_pred -CCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCCCCCceeecCccccCCCCCCCCCCCc
Q 018817 239 -DGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGI 317 (350)
Q Consensus 239 -~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~y~~~ 317 (350)
+| |++|+|.||++|||+||+||+||||+|||++|||+.+ .++|||++||++|+.|++|.|+++++++ ++ ++|+++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~-~~-~~y~~~ 311 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPN-GK-SDREPL 311 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTT-CC-CSSCCC
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccc-cc-cCCCCc
Confidence 88 9999999999999999999999999999999999864 7799999999999999999999999987 66 899999
Q ss_pred CHHHHHHHHHHcc
Q 018817 318 KYREYLQLQQSNQ 330 (350)
Q Consensus 318 ~~~e~~~~~~~~~ 330 (350)
|++||++.+++..
T Consensus 312 t~~e~l~~~~~~~ 324 (331)
T 1odm_A 312 SYGDYLQNGLVSL 324 (331)
T ss_dssp BHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999888764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.2e-70 Score=509.17 Aligned_cols=277 Identities=15% Similarity=0.202 Sum_probs=235.7
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCC-HHHHhhHhcCCCCCce
Q 018817 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLS-DEQKREYAGKKLFDPI 113 (350)
Q Consensus 35 ~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~ 113 (350)
..+||||||+.|.+++. + ++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++.......++
T Consensus 2 ~~~iPvIDls~l~~~~~----~--~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLH----Q--DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCCEEEHHHHHTTCS----H--HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCCcEEEchhhcCCCH----H--HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 45899999998865544 1 289999999999999999999999999999999999999 9999999766556678
Q ss_pred eccccccc------CCCcccchhhcccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC----ChHHH
Q 018817 114 RWGTSFNV------NVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGL----EESYI 183 (350)
Q Consensus 114 Gy~~~~~~------~~~~~~d~~e~~~~~~~p~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~~~ 183 (350)
||+..... ...+..||+|.|.++.. ++.|| +++||+.+++|+++|.+++.+||++|+++||+ ++++|
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA-DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp EEEEC-----------------CEEEEECSS-SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC-CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 99754422 22467899999998766 46799 89999999999999999999999999999999 87777
Q ss_pred HHhhcccCCcccceeccccCCCCCCC--c--cccCCCcccCCceeEEeeC-CCCC---cccccCCceEecCCCCCcEEEE
Q 018817 184 QKAMDLETDSHQLLVVNLYPPCPQPE--V--VMGLPPHSDHGLLTILMQN-DHVG---LHVRHDGKWIPVNPPPGSFVVN 255 (350)
Q Consensus 184 ~~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~~~lTll~q~-~~~G---Lqv~~~g~W~~V~~~~g~~iVn 255 (350)
.+. .+.+|++||||++.++ . .+|+++|||+|+||||+|| .++| |||+++|+|++|+|.||++|||
T Consensus 153 ~~~-------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVN 225 (311)
T 1dcs_A 153 LDC-------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVF 225 (311)
T ss_dssp HSC-------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEE
T ss_pred hhc-------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEE
Confidence 632 5789999999998763 3 6789999999999999998 8999 9999999999999999999999
Q ss_pred ecchhHHhhCCccccccceeecCC-----CCceeEEEEeeCCCCCceeecCccccCCCCCCCCC--CCcCHHHHHHHHHH
Q 018817 256 IGDHMEILSNGKYKSVLHRAVVNG-----KATRISVATAHGPPLDTVVGPAQDLLDNENRPPLY--RGIKYREYLQLQQS 328 (350)
Q Consensus 256 ~Gd~l~~~TnG~~~a~~HRVv~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~y--~~~~~~e~~~~~~~ 328 (350)
+||+||+||||+|||++|||+.++ .++|||++||++|+.|++|. +++++++ ++|++| +++|++||+..+++
T Consensus 226 iGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~-~~p~~y~~~~~t~~ey~~~~~~ 303 (311)
T 1dcs_A 226 CGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLAREC-GFDVSLDGETATFQDWIGGNYV 303 (311)
T ss_dssp ECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHT-TCCCCCCSSEEEHHHHHCSSCC
T ss_pred HHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCC-CCccccCCCCccHHHHHHHHHH
Confidence 999999999999999999999987 67999999999999999999 9999988 789999 99999999987655
Q ss_pred c
Q 018817 329 N 329 (350)
Q Consensus 329 ~ 329 (350)
+
T Consensus 304 ~ 304 (311)
T 1dcs_A 304 N 304 (311)
T ss_dssp C
T ss_pred H
Confidence 4
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-64 Score=466.39 Aligned_cols=260 Identities=22% Similarity=0.324 Sum_probs=221.1
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCCCCceec
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW 115 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy 115 (350)
++||||||+.. +++++|.+||+++|||||+||||+.++++++++.+++||++ |+|+++... +..++||
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~-~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN-RETHDGF 69 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC-TTTCCEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC-CCCCCcc
Confidence 47999999963 35789999999999999999999999999999999999997 789998543 4557888
Q ss_pred cccc-c--cCCCcccchhhcccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HH---HHHhh
Q 018817 116 GTSF-N--VNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEE--SY---IQKAM 187 (350)
Q Consensus 116 ~~~~-~--~~~~~~~d~~e~~~~~~~p~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~~~~ 187 (350)
.... . .......||+|.|.+. .||..+++||+.+++|+++|.+++.+||++|+++||++. ++ |.+.+
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~-----p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY-----PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC-----TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccCccccccCCCCcccHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 6433 1 1223467999998763 388888999999999999999999999999999999763 22 55555
Q ss_pred cccCCcccceeccccCCCCCCC--ccccCCCcccCCceeEEeeCCCCCccccc-CCceEecCCCCCcEEEEecchhHHhh
Q 018817 188 DLETDSHQLLVVNLYPPCPQPE--VVMGLPPHSDHGLLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHMEILS 264 (350)
Q Consensus 188 ~~~~~~~~~lrl~~Yp~~~~~~--~~~~~~~HtD~~~lTll~q~~~~GLqv~~-~g~W~~V~~~~g~~iVn~Gd~l~~~T 264 (350)
.....+.||++||||++.++ ..+|+++|||+|+||||+||.++||||+. +|+|++|+|.||++|||+||+||+||
T Consensus 145 --~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 145 --ANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp --TTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred --cCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 41234789999999998765 47899999999999999999999999996 89999999999999999999999999
Q ss_pred CCccccccceeecCC----CCceeEEEEeeCCCCCceeecCccccCCCCCCCCCCCcCHHHHHHHHHHc
Q 018817 265 NGKYKSVLHRAVVNG----KATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 329 (350)
Q Consensus 265 nG~~~a~~HRVv~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~y~~~~~~e~~~~~~~~ 329 (350)
||+|||++|||+.++ ..+|||++||++|+.|++|.| ++|++||+++++++
T Consensus 223 ng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p---------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE---------------RYTADSYLMERLRE 276 (280)
T ss_dssp TTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS---------------SCBHHHHHHHHHHH
T ss_pred CCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC---------------CccHHHHHHHHHHH
Confidence 999999999998874 458999999999999999964 48999999988754
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.58 E-value=0.083 Score=46.58 Aligned_cols=106 Identities=17% Similarity=0.120 Sum_probs=63.8
Q ss_pred HHHHHHHHHhcCCChHHHHHhhcccCCcccceeccccCCCCCCCccccCCCcccCC-----------ceeEEee-CC---
Q 018817 166 NELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHG-----------LLTILMQ-ND--- 230 (350)
Q Consensus 166 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q-~~--- 230 (350)
..|.+.|...|+..+.++...+ . ....-+++++|.+.. -..+|.|.. .+|+++. +.
T Consensus 73 ~~l~~~i~~~l~~~~~f~~~~L--~-~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~ 143 (243)
T 3dkq_A 73 VALGQQIMDRLLAHPQFVSAAL--P-LQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPEN 143 (243)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHC--E-EEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGG
T ss_pred HHHHHHHHHHHccCcchhhccc--c-cccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCC
Confidence 3444445555555544443333 2 223447889997532 235676653 4666664 22
Q ss_pred -C-CCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCC
Q 018817 231 -H-VGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGP 292 (350)
Q Consensus 231 -~-~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p 292 (350)
. +.|.+.....=..|+|..|.+|+.-. ..+|+|..-....|++++.+++-
T Consensus 144 ~~GGetvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 144 YQGGELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp EEECCEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEEE
T ss_pred CCCceEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehhh
Confidence 2 33555553334679999999998743 36899965444689999998863
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=94.48 E-value=0.51 Score=41.55 Aligned_cols=185 Identities=16% Similarity=0.107 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCCCCceecccccccCCCcccchhhcccc
Q 018817 56 KTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKI 135 (350)
Q Consensus 56 ~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~ 135 (350)
.....+..++.+.|++++.| -+++++.+++.+.++.+-+ + -.+ . .+..|-.. . ....+.+..-
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~~~---~--g~~-~---~a~i~~~~-~----~~~~~iR~d~-- 76 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRALHD---T--GKF-T---DGQLVSQK-S----DSSKDIRGDK-- 76 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHHHH---T--TCS-C---SCCEEECC-S----SSTTCEECCE--
T ss_pred hhHHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhhhh---c--CCc-c---cccccccc-c----cccccccccc--
Confidence 34567889999999988655 4889999999888776420 0 001 0 01111110 0 0000111000
Q ss_pred cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccCCcccceeccccCCCCCCCccccCC
Q 018817 136 HVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLP 215 (350)
Q Consensus 136 ~~~p~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~ 215 (350)
..|-+......+.+..|.+.|.++... +...+|+.. . ....-+.+.+|++. .-...
T Consensus 77 -----i~wl~~~~~~~~~~~~l~~~i~~l~~~----ln~~lGl~~------i----~~~~e~~~~~Y~~~-----G~~y~ 132 (247)
T 2hbt_A 77 -----ITWIEGKEPGCETIGLLMSSMDDLIRH----CNGKLGSYK------I----NGRTKAMVACYPGN-----GTGYV 132 (247)
T ss_dssp -----EEEECSCSTTCHHHHHHHHHHHHHHHH----TTTTSTTCC------E----EEECCEEEEEECSS-----SCCEE
T ss_pred -----eeeecccccchhHHHHHHHHHHHHHHH----HhhhcCccc------c----cccceEEEEEecCC-----CCccc
Confidence 012111101112233455555544332 222233220 0 11233567788741 12335
Q ss_pred CcccCC-----ceeEEee---CC----CCC-cccccCC--ceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCC
Q 018817 216 PHSDHG-----LLTILMQ---ND----HVG-LHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGK 280 (350)
Q Consensus 216 ~HtD~~-----~lTll~q---~~----~~G-Lqv~~~g--~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~ 280 (350)
+|.|.. .+|+++. ++ .+| |.+..++ ....|.|..|.+|++-.+. -.+|.|.. ..
T Consensus 133 ~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~ 201 (247)
T 2hbt_A 133 RHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AY 201 (247)
T ss_dssp EECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BS
T ss_pred ccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CC
Confidence 677762 6787775 21 134 6777633 6789999999999887531 15899965 45
Q ss_pred CceeEEEEeeCC
Q 018817 281 ATRISVATAHGP 292 (350)
Q Consensus 281 ~~R~Si~~F~~p 292 (350)
+.|+||+.+++-
T Consensus 202 ~~R~sit~W~~~ 213 (247)
T 2hbt_A 202 ATRYAITVWYFD 213 (247)
T ss_dssp SCEEEEEEEEEE
T ss_pred CEEEEEEEEEcC
Confidence 699999987754
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.59 E-value=1 Score=38.70 Aligned_cols=43 Identities=21% Similarity=0.136 Sum_probs=33.5
Q ss_pred CceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCC-CceeEEEEeeCCCC
Q 018817 240 GKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGK-ATRISVATAHGPPL 294 (350)
Q Consensus 240 g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~-~~R~Si~~F~~p~~ 294 (350)
..+..|.|.+|.+||+-+. | .|+|..+.+ ++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~-l-----------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW-L-----------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT-S-----------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC-C-----------EEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999988765 3 799987654 59999999998764
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=77.35 E-value=6.2 Score=33.67 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=33.7
Q ss_pred eEecCCCCCcEEEEecchhHHhhCCcc-ccccceeecCCCCceeEEEEeeCCC
Q 018817 242 WIPVNPPPGSFVVNIGDHMEILSNGKY-KSVLHRAVVNGKATRISVATAHGPP 293 (350)
Q Consensus 242 W~~V~~~~g~~iVn~Gd~l~~~TnG~~-~a~~HRVv~~~~~~R~Si~~F~~p~ 293 (350)
-+.|.|..|.+|+.--- ..+|.. ..++|+|..-....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYSL----KPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEESB----CTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEee----CCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 47899999998887531 123332 5789999654445899999888654
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=75.04 E-value=5.1 Score=34.80 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=51.5
Q ss_pred eeccccCCCCCCCccccCCCcccC--------CceeEEeeCCCCCccccc-C----------CceEecCCCCCcEEEEec
Q 018817 197 LVVNLYPPCPQPEVVMGLPPHSDH--------GLLTILMQNDHVGLHVRH-D----------GKWIPVNPPPGSFVVNIG 257 (350)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~--------~~lTll~q~~~~GLqv~~-~----------g~W~~V~~~~g~~iVn~G 257 (350)
+-+|+|++.. -++++|.|- .+.||-+-.. .-+.+.. . +..+.|...+|.++|+-|
T Consensus 128 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G 201 (238)
T 2iuw_A 128 LLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEG 201 (238)
T ss_dssp EEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEEE
T ss_pred EEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEECh
Confidence 4579997532 267788884 2334444221 1233322 1 468889999999999999
Q ss_pred chhHHhhCCccccccceeecCCCCceeEEEEeeC
Q 018817 258 DHMEILSNGKYKSVLHRAVVNGKATRISVATAHG 291 (350)
Q Consensus 258 d~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~ 291 (350)
++=..|.-|.-+.. .....|+|+.|=.-
T Consensus 202 ~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 202 ATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp THHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 98767765443311 12458999998653
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=74.49 E-value=8.2 Score=32.98 Aligned_cols=85 Identities=20% Similarity=0.066 Sum_probs=50.7
Q ss_pred ceeccccCCCCCCCccccCCCcccCC-----------ceeEEee-CC--CCC-cccccCCceEecCCCCCcEEEEecchh
Q 018817 196 LLVVNLYPPCPQPEVVMGLPPHSDHG-----------LLTILMQ-ND--HVG-LHVRHDGKWIPVNPPPGSFVVNIGDHM 260 (350)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q-~~--~~G-Lqv~~~g~W~~V~~~~g~~iVn~Gd~l 260 (350)
.+++.+|.+... ..+|.|+. .+|+++. +. .+| +.+..- =+.|.|..|.+|+.-.-.
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~--~~~V~P~~G~al~f~~~~- 182 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL--NLSVHPRKGMAVYFEYFY- 182 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT--TEEECCCTTCEEEEECCC-
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC--CCEEecCCCeEEEEeccC-
Confidence 367788864221 34566653 4788775 22 233 333222 278899999988865411
Q ss_pred HHhhCCc-cccccceeecCCCCceeEEEEeeCC
Q 018817 261 EILSNGK-YKSVLHRAVVNGKATRISVATAHGP 292 (350)
Q Consensus 261 ~~~TnG~-~~a~~HRVv~~~~~~R~Si~~F~~p 292 (350)
.+|. -..++|+|..-....|+++..+++-
T Consensus 183 ---~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 183 ---QDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ---SSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred ---CCCCCCCccccccceeccccEEEEEeeEec
Confidence 1222 1467999965444589999888764
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=74.38 E-value=2.2 Score=39.47 Aligned_cols=92 Identities=21% Similarity=0.372 Sum_probs=60.3
Q ss_pred ceeccccCCCCCCCccccCCCcccCC------ceeEEeeCCCCCccccc-CCceEecCCCCCcEEEEecchhHHhhCCcc
Q 018817 196 LLVVNLYPPCPQPEVVMGLPPHSDHG------LLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHMEILSNGKY 268 (350)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~~~~~HtD~~------~lTll~q~~~~GLqv~~-~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~ 268 (350)
.+-+|+|.+ ..++++|.|.. ++|+-+-.. .-+.+.. ++.++.+...+|+++|+-|++=..|..|.-
T Consensus 199 ~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSLG~~-~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSLGSE-IVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECT------TCCEEEECCCTTTBCSCEEEEEESSC-EEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecC------CCCEeeccCCchhcCCeEEEEECCCc-eeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 456788975 12788899873 344444222 2344444 567899999999999999999988877665
Q ss_pred ccccceeec------------------CCCCceeEEEEeeCCCC
Q 018817 269 KSVLHRAVV------------------NGKATRISVATAHGPPL 294 (350)
Q Consensus 269 ~a~~HRVv~------------------~~~~~R~Si~~F~~p~~ 294 (350)
+-...-+-. .....|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 433322210 01236999999876654
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=71.83 E-value=5.4 Score=33.75 Aligned_cols=79 Identities=15% Similarity=0.158 Sum_probs=48.5
Q ss_pred eeccccCCCCCCCccccCCCcccCC--------ceeEEeeCCCCCccccc----------CCceEecCCCCCcEEEEecc
Q 018817 197 LVVNLYPPCPQPEVVMGLPPHSDHG--------LLTILMQNDHVGLHVRH----------DGKWIPVNPPPGSFVVNIGD 258 (350)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTll~q~~~~GLqv~~----------~g~W~~V~~~~g~~iVn~Gd 258 (350)
+-+|+|.+.. -++++|.|-. ++++-+... .-+.+.. .+..+.+...+|.++|+-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~~-~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECCCc-eEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 3488997532 2577888762 234433221 2233332 23567888889999999999
Q ss_pred hhHHhhCCccccccceeecC--CCCceeEEEEe
Q 018817 259 HMEILSNGKYKSVLHRAVVN--GKATRISVATA 289 (350)
Q Consensus 259 ~l~~~TnG~~~a~~HRVv~~--~~~~R~Si~~F 289 (350)
+=..|. |.|-.. ....|+|+.|-
T Consensus 176 ~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhheeE--------eeccccCCCCCCEEEEEee
Confidence 877676 444322 13589999984
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=71.30 E-value=16 Score=31.03 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=49.4
Q ss_pred eeccccCCCCCCCccccCCCcccC-----C--ceeEEeeCCCCCccccc---CCceEecCCCCCcEEEEecchhHHhhCC
Q 018817 197 LVVNLYPPCPQPEVVMGLPPHSDH-----G--LLTILMQNDHVGLHVRH---DGKWIPVNPPPGSFVVNIGDHMEILSNG 266 (350)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~-----~--~lTll~q~~~~GLqv~~---~g~W~~V~~~~g~~iVn~Gd~l~~~TnG 266 (350)
+-+|+|.+ +. ++++|.|. + ++|+-+-.. .-+.+.. .+..+.+...+|+++|.-|++= .|
T Consensus 107 ~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--- 175 (211)
T 3i3q_A 107 CLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--- 175 (211)
T ss_dssp EEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC---
T ss_pred EEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchHH-ce---
Confidence 45788975 22 78889883 2 334444322 2344433 3568889989999999988862 22
Q ss_pred ccccccceeecCCC-------CceeEEEEee
Q 018817 267 KYKSVLHRAVVNGK-------ATRISVATAH 290 (350)
Q Consensus 267 ~~~a~~HRVv~~~~-------~~R~Si~~F~ 290 (350)
.|.|..... ..|+|+.|-.
T Consensus 176 -----~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -----YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -----CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -----EeccCcccCCcCCCCCCCEEEEEeee
Confidence 466644321 3599999864
No 16
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=52.18 E-value=6.5 Score=36.77 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=39.5
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcC
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDL 96 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~l 96 (350)
++|.||++.+.. ++ +..+++.+|+.++|+..+.+-.++.+ +..+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~-~d----~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR-YD----EHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH-CH----HHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhc-CH----HHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 789999988763 23 67888999999999999999888764 444556666443
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=47.80 E-value=11 Score=36.03 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=39.5
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhc
Q 018817 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFD 95 (350)
Q Consensus 35 ~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~fF~ 95 (350)
..-||.||++++.++. +.+...+.+++.|++.|.|. ||.+...+..+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4579999999875322 12445577899999988876 888877777777777753
No 18
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=40.03 E-value=26 Score=30.75 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=36.1
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF 93 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~f 93 (350)
++|+-|||+... ++ +..++|.+++.++|+..+.+-.++.+ +..+.++.|
T Consensus 16 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~ 64 (283)
T 1otj_A 16 AQISGADLTRPL--SD----NQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRF 64 (283)
T ss_dssp EEEESCCSSSCC--CH----HHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTT
T ss_pred EEEECCCcCccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 467888998854 34 56788999999999999988877664 344455554
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=37.41 E-value=19 Score=30.43 Aligned_cols=49 Identities=29% Similarity=0.363 Sum_probs=33.9
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHH
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASE 91 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~--~~~~~~~~~~~ 91 (350)
.||++++... +++ ++++.+.+++.+.-.+.|.|||+=. +.+++++..+.
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~~~G~t~~eA~~~~~ 175 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERAT 175 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcEEEcCCHHHHHHHHH
Confidence 6899988753 244 6788899999888889999999632 23344444443
No 20
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=33.63 E-value=78 Score=28.62 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=32.1
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh----HHHHHHHHHHHHHhc
Q 018817 46 LTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN----TLRDEMIRASESFFD 95 (350)
Q Consensus 46 l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~----~~~~~~~~~~~~fF~ 95 (350)
|..+++++- .+++.+.++.-||..=.+|||+. +-++.+.+++++|++
T Consensus 298 l~~g~~e~i---~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDKI---KAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHHH---HHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHHH---HHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 445666433 34445555677876666798754 778999999999975
No 21
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=32.26 E-value=41 Score=29.79 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=37.1
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCC-CChHHHHHHHHHHHHHhc
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHG-VPNTLRDEMIRASESFFD 95 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhG-i~~~~~~~~~~~~~~fF~ 95 (350)
++|+-|||+... ++ +..++|.+++.++|+..+.+-. ++. ++..+.++.|=.
T Consensus 26 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDL--DA----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 467778998754 33 5678899999999999998877 775 455555666543
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=31.20 E-value=24 Score=29.47 Aligned_cols=50 Identities=10% Similarity=0.113 Sum_probs=34.4
Q ss_pred CCcee-ecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCC---C-----hHHHHHHHHHHHH
Q 018817 37 TIPII-DFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGV---P-----NTLRDEMIRASES 92 (350)
Q Consensus 37 ~lPvI-Dl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi---~-----~~~~~~~~~~~~~ 92 (350)
.||++ ++.... ++ ++++.+.+++.+.-.+.|.|||+ . .+.+++++..+..
T Consensus 117 ~ip~~~~y~~~g--~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSA--TE----EAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSS--SH----HHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCC--cH----HHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 68999 776432 44 67788888888888888999985 2 1345555555544
No 23
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=30.52 E-value=27 Score=29.42 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=33.6
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHH
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASE 91 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~--~~~~~~~~~~~ 91 (350)
.||++++... ++. +.++.+.+++.+.-.+.|.|||+=. +.+++++..+.
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 172 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcEEEeCCHHHHHHHHH
Confidence 6899988754 244 6778889999888888999999622 23344444333
No 24
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=29.26 E-value=35 Score=30.42 Aligned_cols=63 Identities=21% Similarity=0.318 Sum_probs=39.1
Q ss_pred cCCCcccC--------CceeEEee-CCCCCcccccCCceEecCCCCCc-EEEEecchhHHhhCCccccccceeecCCCCc
Q 018817 213 GLPPHSDH--------GLLTILMQ-NDHVGLHVRHDGKWIPVNPPPGS-FVVNIGDHMEILSNGKYKSVLHRAVVNGKAT 282 (350)
Q Consensus 213 ~~~~HtD~--------~~lTll~q-~~~~GLqv~~~g~W~~V~~~~g~-~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~ 282 (350)
.+.+|.|. +.+-++.. ...+|..+..+|.-+..++ |. .++| -+..|.|.+.+..+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCCC
Confidence 46789998 33444443 2235666665665444444 43 2222 24589999998889
Q ss_pred eeEEEEee
Q 018817 283 RISVATAH 290 (350)
Q Consensus 283 R~Si~~F~ 290 (350)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998766
No 25
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=29.15 E-value=58 Score=18.37 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhcceEEE
Q 018817 56 KTIQAIGNACLKWGFFEV 73 (350)
Q Consensus 56 ~~~~~l~~A~~~~GfF~l 73 (350)
+..+.|.-.|.+-||||-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 677888899999999983
No 26
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=29.06 E-value=38 Score=29.77 Aligned_cols=49 Identities=20% Similarity=0.195 Sum_probs=36.4
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF 93 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~~~~~~~~~~~~f 93 (350)
++|.=|||+... ++ +..++|..|+.++|...+.+-.++.+ +..+.++.|
T Consensus 14 aei~gvdl~~~l--~~----~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~f 62 (277)
T 3pvj_A 14 AQISGVDISRDI--SA----EERDAIEQALLQHQVLFLRDQPINPE---QQARFAARF 62 (277)
T ss_dssp EEEESCCTTSCC--CH----HHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGG
T ss_pred EEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHh
Confidence 467778998744 34 66788999999999999998888764 444455554
No 27
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.56 E-value=59 Score=28.97 Aligned_cols=51 Identities=8% Similarity=0.030 Sum_probs=37.5
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeC-CCChHHHHHHHHHHHHHhc
Q 018817 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINH-GVPNTLRDEMIRASESFFD 95 (350)
Q Consensus 36 ~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nh-Gi~~~~~~~~~~~~~~fF~ 95 (350)
++|+=|||+... ++ +..++|..|+.++|.+.+.+- .++.+ +..+.++.|=.
T Consensus 20 aei~gvdl~~~L--~d----~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~ 71 (301)
T 3r1j_A 20 ARVDGVRLGGDL--DD----ATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGT 71 (301)
T ss_dssp EEEESCCCSTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSC
T ss_pred ceEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCC
Confidence 477778998533 34 667889999999999999987 77764 44556666643
No 28
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.35 E-value=44 Score=21.38 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=14.5
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 67 (350)
|.|.+.-+..-+++++++.++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444333323455555666666655554
No 29
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=27.66 E-value=46 Score=21.22 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=15.6
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 67 (350)
|.|.+.-+..-+++++++.++.|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433333555666666666666654
No 30
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=27.26 E-value=79 Score=23.98 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.1
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChH
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNT 81 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~ 81 (350)
=|||++.+.. . .....|.+.|+++|+.-+--.|.+.+
T Consensus 50 VVlDl~~l~~--~----~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 50 VVINVSGLES--P----VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEEECCS--S----CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEEccccCC--h----HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 3679988752 2 23677889999999999877776644
No 31
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=26.56 E-value=69 Score=20.73 Aligned_cols=28 Identities=4% Similarity=0.084 Sum_probs=17.1
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 67 (350)
|+|.+.- ..-+++++++.++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 4555554 334566777777777776655
No 32
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=26.53 E-value=39 Score=28.92 Aligned_cols=50 Identities=18% Similarity=0.034 Sum_probs=35.2
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHH
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASES 92 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~--~~~~~~~~~~~~ 92 (350)
.||++++... ++. ++++++.+++.+.-.+.|.|||+=. +.+++++..+..
T Consensus 161 ~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 161 GISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp CCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 6899988653 344 6788888999888889999999632 344555554444
No 33
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.47 E-value=34 Score=23.62 Aligned_cols=40 Identities=15% Similarity=0.240 Sum_probs=33.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhh
Q 018817 148 LGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAM 187 (350)
Q Consensus 148 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 187 (350)
.+-+..++.|+..-.+-...-+..||..+||+.+.....|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 3557788889888888888889999999999998877776
No 34
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=24.55 E-value=1.1e+02 Score=25.49 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=44.1
Q ss_pred ccCCCcccCC--ceeEEeeCCCCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccc----cccceeecCCCCceeE
Q 018817 212 MGLPPHSDHG--LLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYK----SVLHRAVVNGKATRIS 285 (350)
Q Consensus 212 ~~~~~HtD~~--~lTll~q~~~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~----a~~HRVv~~~~~~R~S 285 (350)
..+.+|+|.. .|++++ ||++-. +..-+.||+.-..|..|..- +-.|.|...+..+|+-
T Consensus 113 ~~I~pH~g~~n~~lR~HL-----~L~~p~-----------~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHL-----GLVIPK-----------EGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEEECCSCTTEEEEEE-----EEECCS-----------SSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred CCcCCeeCCCCCeEEEEE-----EEEeCC-----------CCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 3457788874 666666 444322 12344567777777777643 6789999888888987
Q ss_pred EEE-eeCCCC
Q 018817 286 VAT-AHGPPL 294 (350)
Q Consensus 286 i~~-F~~p~~ 294 (350)
+.+ |.+|+.
T Consensus 177 L~~D~~rPdl 186 (197)
T 3rcq_A 177 FIVDVWHPEL 186 (197)
T ss_dssp EEEEEECTTS
T ss_pred EEEeeeCCCC
Confidence 665 666664
No 35
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=23.06 E-value=41 Score=29.55 Aligned_cols=50 Identities=20% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHH
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASES 92 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~--~~~~~~~~~~~~ 92 (350)
.||++++... ++. +.++++.+++.+.-.+.|.|||+=. +.+++++..+..
T Consensus 179 ~v~v~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~ 230 (274)
T 2v9l_A 179 GVGILPWMVP--GTD----AIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDT 230 (274)
T ss_dssp CEEECCCCCS--SSH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 6888887643 344 7788899999988899999999632 344555554444
No 36
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=22.58 E-value=64 Score=28.28 Aligned_cols=52 Identities=21% Similarity=0.268 Sum_probs=34.4
Q ss_pred CCceeecCC-------CCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHH
Q 018817 37 TIPIIDFSM-------LTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASES 92 (350)
Q Consensus 37 ~lPvIDl~~-------l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~--~~~~~~~~~~~~ 92 (350)
.||++++.. ...+++ ++++.+.+++.+.-.+.|.|||+=. +.+++++..+..
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~~ 217 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAFY 217 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHHH
Confidence 689998642 223355 7788888999888888899999632 334455444443
No 37
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.39 E-value=65 Score=21.01 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=16.7
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 67 (350)
|+|.+.-+..-+++++++.++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444444333556666777777766665
No 38
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=22.25 E-value=64 Score=20.42 Aligned_cols=29 Identities=28% Similarity=0.421 Sum_probs=17.0
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 018817 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (350)
Q Consensus 39 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 67 (350)
|.|.+.-+..-+++++++.++.|.+++.+
T Consensus 4 P~i~i~~~~g~s~e~k~~l~~~l~~~l~~ 32 (63)
T 2x4k_A 4 PIVNVKLLEGRSDEQLKNLVSEVTDAVEK 32 (63)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 56666544333555666666666666665
No 39
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=21.80 E-value=39 Score=28.22 Aligned_cols=49 Identities=18% Similarity=0.154 Sum_probs=32.6
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcc---eEEEEeCCCCh--HHHHHHHHHHHH
Q 018817 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWG---FFEVINHGVPN--TLRDEMIRASES 92 (350)
Q Consensus 37 ~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~G---fF~l~nhGi~~--~~~~~~~~~~~~ 92 (350)
.||++++. .+. .+.++.+.+++.+.+ .+.|.|||+=. +.+++++..+..
T Consensus 139 ~vp~~~~~---~g~----~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~ 192 (208)
T 2irp_A 139 KIPIFPNE---QNI----PLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEA 192 (208)
T ss_dssp EEEEECCC---SCH----HHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeeecCC---CCH----HHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 68888764 223 367888888888865 78889999632 344555554444
No 40
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=21.19 E-value=83 Score=21.32 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=28.7
Q ss_pred ceeecCCCCCC-ChhHHHHHHHHHHHHHHhc-c----eEEEEeCCCChHHH
Q 018817 39 PIIDFSMLTSG-SPEQRYKTIQAIGNACLKW-G----FFEVINHGVPNTLR 83 (350)
Q Consensus 39 PvIDl~~l~~~-d~~~r~~~~~~l~~A~~~~-G----fF~l~nhGi~~~~~ 83 (350)
|+|.+.-+... +++++++.++.|.+++.+. | -+++.-+-++.+.+
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~~~~~w 51 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESW 51 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECCGGGH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEeChHHE
Confidence 56666544444 6778888889998888863 3 44555455555443
Done!