BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018820
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 221/302 (73%), Gaps = 2/302 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S +SHV P DPILGVT A+ +D + K+NLGVGAYR + GKP VLN VRKAE ++
Sbjct: 2 SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEA-MIAA 60
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
+ KEYLPI GLA+F + SA+L LG +S A + R TVQ +SGTGSLRVGA FL R +
Sbjct: 61 KKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFF 120
Query: 167 H-QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225
R +Y+P+P+WGNH +F AGL +++YRYYDP T L+F G +ED+ P +I+LL
Sbjct: 121 KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILL 180
Query: 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285
HACAHNPTGVDP +QW+ + +++ + LL +FD AYQGFASG ++ DA ++R F+ G
Sbjct: 181 HACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240
Query: 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345
+ ++QSYAKN+GLYGER GA +++C+ A+ A RVESQ+K++IRPMYSNPP++GA I +
Sbjct: 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASL 300
Query: 346 IL 347
IL
Sbjct: 301 IL 302
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 352 bits (904), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 220/302 (72%), Gaps = 2/302 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S +SHV P DPILGVT A+ +D + K+NLGVGAYR + GKP VLN VRKAE ++
Sbjct: 2 SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEA-MIAA 60
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
+ KEYLPI GLA+F + SA+L LG +S A + R TVQ +SGTGSLRVGA FL R +
Sbjct: 61 KKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFF 120
Query: 167 H-QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225
R +Y+P+P+WGNH +F AGL +++YRYYDP T L+F G +ED+ P +I+LL
Sbjct: 121 KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILL 180
Query: 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285
HACAHNPTGVDP +QW+ + +++ + LL +FD AYQGFASG ++ DA ++R F+ G
Sbjct: 181 HACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240
Query: 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345
+ ++QSYA N+GLYGER GA +++C+ A+ A RVESQ+K++IRPMYSNPP++GA I +
Sbjct: 241 DVVLSQSYAHNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASL 300
Query: 346 IL 347
IL
Sbjct: 301 IL 302
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 351 bits (900), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 167/302 (55%), Positives = 217/302 (71%), Gaps = 2/302 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S ++HV P DPILGVT A+ +D + K+NLGVGAYR + GKP VL VRKAE Q+
Sbjct: 2 SWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA- 60
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
++ KEYLPI GLAEF K SA+L LG ++ ++ R TVQ +SGTG+LRVGA FL R +
Sbjct: 61 KNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFF 120
Query: 167 H-QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225
R +++P+P+WGNH +F AG+ ++ YRYYDP T G +F G LED+ P +++LL
Sbjct: 121 KFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLL 180
Query: 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285
HACAHNPTGVDP +QW+ I +++ K L FFD AYQGFASG D DA +VR F+ G
Sbjct: 181 HACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGI 240
Query: 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345
+ QSYAKN+GLYGERVGA ++VCK A+ A RVESQ+K++IRP+YSNPP++GA I A
Sbjct: 241 NVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAAT 300
Query: 346 IL 347
IL
Sbjct: 301 IL 302
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/302 (54%), Positives = 216/302 (71%), Gaps = 2/302 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S ++HV P DPILGVT A+ +D + K+NLGVGAYR + GKP VL VRKAE Q+
Sbjct: 2 SWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA- 60
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
++ KEYLPI GLAEF K SA+L LG ++ ++ R TVQ +SGTG+LRVGA FL R +
Sbjct: 61 KNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFF 120
Query: 167 H-QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225
R +++P+P+WGNH +F AG+ ++ YRYYDP T G +F G LED+ P +++LL
Sbjct: 121 KFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLL 180
Query: 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285
HACAHNPTGVDP +QW+ I +++ K L FFD AYQGFASG D DA +VR F+ G
Sbjct: 181 HACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGI 240
Query: 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345
+ QSYA N+GLYGERVGA ++VCK A+ A RVESQ+K++IRP+YSNPP++GA I A
Sbjct: 241 NVCLCQSYAXNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAAT 300
Query: 346 IL 347
IL
Sbjct: 301 IL 302
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/309 (53%), Positives = 216/309 (69%), Gaps = 6/309 (1%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
SVF+ V +A + + + +DP P K+NLGVGAYRT++ +P VL VVRK EQ++ N+
Sbjct: 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
S EYLPI+GLAEF +++L LG DSPA++E RV VQ L GTG+LR+GAEFLAR Y
Sbjct: 64 SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 167 H-----QRTIYIPQPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220
+ +Y+ PTW NH VFT AG ++SYRY+D RGL+ QG L DL +AP
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
+I +LHACAHNPTG DPT +QW++I +M+ + L PFFDSAYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGA 340
V++G E F AQS++KN GLY ERVG L++V K D RV SQ++ ++R +SNPP GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 341 SIVAAILRD 349
IVA L D
Sbjct: 304 RIVARTLSD 312
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 163/309 (52%), Positives = 215/309 (69%), Gaps = 6/309 (1%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
SVF+ V +A + + + +DP P K+NLGVGAYRT++ +P VL VVRK EQ++ N+
Sbjct: 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
S EYLPI+GLAEF +++L LG DSPA++E RV VQ L GTG+LR+GAEFLAR Y
Sbjct: 64 SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 167 H-----QRTIYIPQPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220
+ +Y+ PTW NH VFT AG ++SYRY+D RGL+ QG L DL +AP
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
+I +LHACAHNPTG DPT +QW++I +M+ + L PFFDSAYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGA 340
V++G E F AQS++ N GLY ERVG L++V K D RV SQ++ ++R +SNPP GA
Sbjct: 244 VSEGFELFCAQSFSXNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 341 SIVAAILRD 349
IVA L D
Sbjct: 304 RIVARTLSD 312
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
pdb|2CST|B Chain B, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
Length = 411
Score = 332 bits (850), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 212/307 (69%), Gaps = 6/307 (1%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S+F+ V RAP + +T + +D K+NLGVGAYRT+EG+P VL VVRK EQ + D
Sbjct: 3 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGD 62
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
S EYLPI+GL EF ++++ LG DSPAI + RV +VQ L GTG+LR+GAEFL R Y
Sbjct: 63 GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 167 HQRT-----IYIPQPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220
+ +Y+ PTW NH VF AG +++YRY+D A RGL+ QGLL+D+ AP
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEF 182
Query: 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
+I +LHACAHNPTG DPT +W++I +M+ + L PFFDSAYQGFASGSLD DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGSLDKDAWAVRYF 242
Query: 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGA 340
V++G E F AQS++KN GLY ERVG LS+V K D RV SQ++ ++R +SNPP GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 341 SIVAAIL 347
IVA L
Sbjct: 303 RIVATTL 309
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 328 bits (842), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 212/296 (71%), Gaps = 6/296 (2%)
Query: 60 ILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGL 119
+ +T + +DP P K+NLGVGAYRT++ P VL VV+K EQ++ ND S EYLPI+GL
Sbjct: 6 VFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGL 65
Query: 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH-----QRTIYIP 174
AEF +++L LG DSPA++E RV VQ L GTG+LR+GA+FLAR Y+ +Y+
Sbjct: 66 AEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVS 125
Query: 175 QPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
PTW NH VF+ AG ++SYRY+D RGL+ QG L DL +AP +IV+LHACAHNPT
Sbjct: 126 SPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPT 185
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY 293
G+DPT +QW++I +M+ + L PFFDSAYQGFASG+L+ DA ++R FV++G E F AQS+
Sbjct: 186 GIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSF 245
Query: 294 AKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349
+KN GLY ERVG L++V K + +V SQ++ ++R +SNPP GA IVA+ L +
Sbjct: 246 SKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSN 301
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/307 (52%), Positives = 211/307 (68%), Gaps = 6/307 (1%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S+F+ V RAP + +T + +D K+NLGVGAYRT+EG+P VL VVRK EQ + +
Sbjct: 3 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGN 62
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
S EYLPI+GL EF ++++ LG DSPAI + RV +VQ L GTG+LR+GAEFL R Y
Sbjct: 63 GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 167 HQRT-----IYIPQPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220
+ +Y+ PTW NH VF AG +++YRY+D A RGL+ QGLL D+ AP
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLSDMEKAPEF 182
Query: 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
+I +LHACAHNPTG DPT +W++I +M+ + L PFFDSAYQGFASG+L+ DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGNLEKDAWAVRYF 242
Query: 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGA 340
V++G E F AQS++KN GLY ERVG LS+V K D RV SQ++ ++R +SNPP GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 341 SIVAAIL 347
IVA L
Sbjct: 303 RIVATTL 309
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD A+QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 290 bits (742), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSANFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSHNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K I YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIDANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 71 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 249 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C H PTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP F AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD A QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFARQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C H PTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 SCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 WCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 FCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C H PTG+DPTL+QW+ + QL KG LP FD A+QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 YCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 287 bits (735), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HN TG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 286 bits (733), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+ NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C H PTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K I YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C H PTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K I YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 284 bits (727), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 284 bits (727), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGQGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD A QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K I YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 284 bits (727), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ +W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNASWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HN TG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 284 bits (726), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 283 bits (725), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 140/300 (46%), Positives = 185/300 (61%), Gaps = 2/300 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
R +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVG ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL + GL EF + + +L+ G S I + R T Q G+G+LRVGA+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVGADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 249 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ + D P K+NLG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRDNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 280 bits (717), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 185/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P W H VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 280 bits (717), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 185/302 (61%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P W H VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 183/300 (61%), Gaps = 2/300 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
R +++ P W H VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+KN GLY ERVG ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 277 bits (708), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 184/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LG+G Y+ E GK V+ V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGIGVYKDETGKTPVMTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL + GL EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N GLY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 249 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 276 bits (707), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 183/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL + GL EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A S + N GLY ERVGA ++V ++ R SQ+K IR YSNPP HGAS+VA IL
Sbjct: 249 IVASSCSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 184/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ DPILG+ + D P K++LG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N LY ERVGA ++V ++ R Q+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRANYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 184/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F ++ DPILG+ + D P K++LG+G Y+ E GK VL V+KAEQ L+ +
Sbjct: 1 MFENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH VF AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A SY+ N LY ERVGA ++V ++ R Q+K IR YS+PP HGAS+VA IL
Sbjct: 239 IVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRDNYSSPPAHGASVVATIL 298
Query: 348 RD 349
+
Sbjct: 299 SN 300
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 182/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL + GL EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ P+W NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A S + N GLY ERVGA ++V ++ R Q+K IR YSNPP HGAS+VA IL
Sbjct: 249 IVASSCSXNFGLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 183/302 (60%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LGVG Y+ E GK V+ V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL I G+ EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ PTW NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG+DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A S + N LY ERVGA ++V ++ R SQ+K IR YS+PP HGAS+VA IL
Sbjct: 249 IVASSCSXNFSLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 181/302 (59%), Gaps = 2/302 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
F ++ AP DPILG+ + D P K++LGVG Y+ E GK V+ V+KAEQ L+ +
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENE 70
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
+ K YL + GL EF + + +L+ G S I + R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ PTW NH +F AGL V+ Y YYD L+F L+ L A AG +VL H
Sbjct: 130 VKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG DPTL+QW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
+A S + N LY ERVGA ++V ++ R Q+K IR YSNPP HGAS+VA IL
Sbjct: 249 IVASSCSXNFSLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATIL 308
Query: 348 RD 349
+
Sbjct: 309 SN 310
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 191/309 (61%), Gaps = 7/309 (2%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
++F+++ P D + G+ Y +D K++LG+GAYR + GKP VL V+ AE+ + ND
Sbjct: 3 TLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND 62
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
S EYL I GL +AK+I G S A++E+RV +VQ LSGTG+L + A+F ++ +
Sbjct: 63 SSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFF 122
Query: 167 HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226
+ +Y+ +PTW NH +F GL +Y Y+ T+ L+ G L + AP G+I +LH
Sbjct: 123 PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLH 182
Query: 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV---AD 283
+CAHNPTG+DPT +QW +I + SK + FD+AYQGFA+G LD DA +VR+ V +
Sbjct: 183 SCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST 242
Query: 284 GGECFIAQSYAKNLGLYGERVG----ALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHG 339
F+ QS+AKN G+YGERVG AL+ + + V SQ+ +IR SNPP +G
Sbjct: 243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYG 302
Query: 340 ASIVAAILR 348
A IVA +L
Sbjct: 303 AKIVAKLLE 311
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 183/293 (62%), Gaps = 7/293 (2%)
Query: 58 DPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV 117
DPILG+ + DP+ K+NL +G YR + +P VL V++A D Y P+
Sbjct: 26 DPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMD------YAPVT 79
Query: 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY-HQRTIYIPQP 176
G+A F + + KL G A+R+ R+ + Q L GTG+LR+G + L R + IY P
Sbjct: 80 GIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDV 139
Query: 177 TWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236
+ NH +F AG+ + Y YYDPAT+GLN G+LE L AP G+++L+HACAHNPTGVD
Sbjct: 140 GYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD 199
Query: 237 PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296
PT W ++ +++ + +PF D AYQGFA+G LD DA R V +AQS++ N
Sbjct: 200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSXN 259
Query: 297 LGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349
GLYG R GAL I +A+ A R+ SQ+ L+IRPMY+NPP++GA +V++IL+D
Sbjct: 260 FGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/301 (48%), Positives = 195/301 (64%), Gaps = 2/301 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S+FS V AP DPILG+ A+N D P K+NLGVG Y E+GK +L VR AE+ V +
Sbjct: 23 SLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV-E 81
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
+ YLPI G+A ++ KL+LG DSP I RV T Q L GTG+L++GA+FL
Sbjct: 82 AGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLN 141
Query: 167 HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226
+ + I P+W NH +F +AG V +Y YYD T G+NF G+L L G IV+LH
Sbjct: 142 PKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLH 201
Query: 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286
AC HNPTGVD QW ++ ++++++ L+PF D AYQGF S+++DA +VR+F A
Sbjct: 202 ACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANLN 260
Query: 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346
F++ S++ + LYGERVGALSI+ + D A RV SQ+K VIR YSNPP HG +IVAA+
Sbjct: 261 VFVSSSFSXSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAV 320
Query: 347 L 347
L
Sbjct: 321 L 321
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 196/301 (65%), Gaps = 2/301 (0%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
S+FS V AP DPILG+ A+N D P K+NLGVG Y E+GK +L VR AE+ V +
Sbjct: 23 SLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV-E 81
Query: 107 RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY 166
+ YLPI G+A ++ KL+LG DSP I RV T Q L GTG+L++GA+FL
Sbjct: 82 AGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLN 141
Query: 167 HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226
+ + I P+W NH +F +AG V +Y YYD T G+NF G+L L G IV+LH
Sbjct: 142 PKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLH 201
Query: 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286
AC HNPTGVD QW ++ ++++++ L+PF D AYQGF S+++DA +VR+F A
Sbjct: 202 ACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANLN 260
Query: 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346
F++ S++K+ LYGERVGALSI+ + D A RV SQ+K VIR YSNPP HG +IVAA+
Sbjct: 261 VFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAV 320
Query: 347 L 347
L
Sbjct: 321 L 321
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 260 bits (665), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/320 (45%), Positives = 190/320 (59%), Gaps = 18/320 (5%)
Query: 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND 106
SVFS +P D IL +TV YN D +P K+NLGVGAYR E GKP +L V++AE + +D
Sbjct: 23 SVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSD 82
Query: 107 RSRV-KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH 165
S+ KEY P+ G F + + L+ G DS A +E R+ + Q LSGTGSL +G EFL
Sbjct: 83 LSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLW 142
Query: 166 YHQRTIYIPQPTWGNH----PKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGSAPAG 220
+ Y+P TW NH KVF + K Y Y ++F +D+ SAP
Sbjct: 143 MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEK 202
Query: 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
+I L HACAHNP+G+D T QW+ + +M+ K + FFDSAYQGFA+GS ++DA +VRMF
Sbjct: 203 SIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMF 262
Query: 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE----------SQVKLVIRP 330
V G E +AQS++KN GLYGER+G L +V A V G VE S + L IR
Sbjct: 263 VDAGVEVLVAQSFSKNFGLYGERIGCLHVV--HAGVEGSVEKNKALSAAMVSGMTLQIRK 320
Query: 331 MYSNPPIHGASIVAAILRDR 350
+S IHGA IV I+ D+
Sbjct: 321 TWSMSAIHGAYIVQVIVHDK 340
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 186/303 (61%), Gaps = 1/303 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F V DPIL + + +DP K+NL +G Y E+G L V +AE +L
Sbjct: 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
YLP+ GL + A L+ GAD P +++ RV T+Q L G+G+L+VGA+FL R++
Sbjct: 61 HGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFP 120
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ PTW NH +F AG V +Y +YD AT G+ F LL L + PA +IVLLH
Sbjct: 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP 180
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG D T QW+ + ++++++ L+PF D AYQGF +G ++ DA ++R + G
Sbjct: 181 CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPA 239
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
++ S++K LYGERVG LS++C+ A+ AGRV Q+K +R YS+PP GA +VAA+L
Sbjct: 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVL 299
Query: 348 RDR 350
D
Sbjct: 300 NDE 302
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 258 bits (658), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 186/303 (61%), Gaps = 1/303 (0%)
Query: 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR 107
+F V DPIL + + +DP K+NL +G Y E+G L V +AE +L
Sbjct: 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP 60
Query: 108 SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167
YLP+ GL + A L+ GAD P +++ RV T+Q L G+G+L+VGA+FL R++
Sbjct: 61 HGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFP 120
Query: 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227
+ +++ PTW NH +F AG V +Y +YD AT G+ F LL L + AG+IVLLH
Sbjct: 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHP 180
Query: 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287
C HNPTG D T QW+ + ++++++ L+PF D AYQGF +G ++ DA ++R + G
Sbjct: 181 CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPA 239
Query: 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
++ S++K LYGERVG LS++C+ A+ AGRV Q+K +R YS+PP GA +VAA+L
Sbjct: 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVL 299
Query: 348 RDR 350
D
Sbjct: 300 NDE 302
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 176/301 (58%), Gaps = 2/301 (0%)
Query: 49 FSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS 108
F ++ AP DPI G+ + D P K+NLG+ Y E GK VL V+KAEQ L+ + +
Sbjct: 2 FENITAAPADPIYGLADLFRADERPGKINLGLALYYDETGKIPVLTSVKKAEQYLLENET 61
Query: 109 RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ 168
K YL I G+ EF + + +L+ G S I + R T Q G G+LRV A+FLA++
Sbjct: 62 -TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGHGALRVAADFLAKNTSV 120
Query: 169 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228
+ +++ P+ VF AGL V+ Y YYD L+F L+ L A AG +VL C
Sbjct: 121 KRVWVYNPSSNCSKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFTGC 180
Query: 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288
HNPTG+DPTL+QW+ + QL KG LP F YQGFA G L+ DA+ +R F A E
Sbjct: 181 CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFTFFYQGFARG-LEEDAEGLRAFAAXHKELI 239
Query: 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348
+A SY+KN GLY E VGA ++V ++ R SQ K IR YS+PP HGAS+VA IL
Sbjct: 240 VASSYSKNFGLYNESVGACTLVAADSETVDRAFSQXKAAIRDNYSSPPAHGASVVATILS 299
Query: 349 D 349
+
Sbjct: 300 N 300
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 174/278 (62%), Gaps = 7/278 (2%)
Query: 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD 134
K NL +GAYR E+G+P L VVRKAEQ L+ D + EYLPI G F + K+I G
Sbjct: 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLL-DMNLDYEYLPISGYQPFIDEAVKIIYG-- 102
Query: 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRT--IYIPQPTWGNHPKVFTLAGL-S 191
+ + VQ LSGTG++ +GA+ L R + T IY+ PTW NH V AG +
Sbjct: 103 -NTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKN 161
Query: 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251
+ +Y YYDP T LNF+G+ +D+ +AP G++ +LH CAHNPTGVDP+ +QW I LM +
Sbjct: 162 ICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLA 221
Query: 252 KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311
K FFDSAYQG+ASGSLD+DA + R+F G E +AQS++ N+GLY ER G LS++
Sbjct: 222 KHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSXNMGLYSERAGTLSLLL 281
Query: 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349
K V+S + +IR Y+ PP HGA + IL +
Sbjct: 282 KDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSN 319
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 153/290 (52%), Gaps = 5/290 (1%)
Query: 58 DPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV 117
D IL + + DP K++LGVG Y+ G ++ V AEQ+++ + K Y +
Sbjct: 11 DKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETET-TKTYAGLS 69
Query: 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT 177
G EF K +LILG ++ T+ + GTG+LR E +++ PT
Sbjct: 70 GEPEFQKAMGELILG---DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPT 126
Query: 178 WGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP 237
W NH + GL V++YRY+D TRG++F+G+ DL +A G +VLLH C HNPTG +
Sbjct: 127 WPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANL 186
Query: 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297
TL QW I ++ G LP D AYQGF G L+ DA R+ + E IA S +KN
Sbjct: 187 TLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVLIAASCSKNF 245
Query: 298 GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347
G+Y ER G L +C A + + + R YS PP HGA IV+ +L
Sbjct: 246 GIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVL 295
>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum
Length = 405
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 2/299 (0%)
Query: 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN 105
D + S + D IL + +D K+NL +G ++G + + V A++ LV
Sbjct: 2 DKLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVT 60
Query: 106 DRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH 165
+ + K YL G +F+ L+ LI G +S I + ++ T+QC+ GTG++ V EFL +
Sbjct: 61 ENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFL-KM 119
Query: 166 YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225
+ T+Y+ P + NH + G ++K ++D +N+ L DL + P G+ V+L
Sbjct: 120 LNVETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVIL 179
Query: 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285
+NP V+ + ++ I +++ K + FD AYQGF +L+ D +R F
Sbjct: 180 QISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI 239
Query: 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVA 344
+ QS++KN+ LYGER GAL IVCK + V + + ++R YS+P IH I+
Sbjct: 240 AFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILC 298
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 22/271 (8%)
Query: 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADS 135
+N +GA EEG + L V+ E+ L S Y PI G+ +F + K G
Sbjct: 41 VNGTLGAIHDEEGNLVFLKTVK--EEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFR 98
Query: 136 PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ--RTIYIPQPTWGNHPKVFTLAGLSVK 193
P E + ++ GTG G L +Y + + WG + + + G ++
Sbjct: 99 P---EGHIRSIATAGGTG----GIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLV 151
Query: 194 SYRYYDPATRGLN--FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251
+Y +D + FQ + +L + +V+ + +NPTG + W+ I ++
Sbjct: 152 TYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKD 211
Query: 252 ------KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGER 303
++ D AY + SG D F E Y +K YG+R
Sbjct: 212 LVAIGRNNVIIGIDVAYLDY-SGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTXYGQR 270
Query: 304 VGALSIVCKTADVAGRVESQVKLVIRPMYSN 334
VGA + ++A K R +SN
Sbjct: 271 VGAXIGISDDEEIADEFFEVNKSTSRATWSN 301
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 41/261 (15%)
Query: 113 YLPIVGLAEFNKLSAKLILGADSPAI---RENRVTTVQCLSGTGSLRVGAEFLARHYHQR 169
Y P G+ E L + +L D+P + +R L+ SL VG F+ +
Sbjct: 84 YAPPQGIEELRDLWQQKML-RDNPELSIDNMSRPIVTNALTHGLSL-VGDLFVNQ---DD 138
Query: 170 TIYIPQPTWGNHPKVF-TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228
TI +P+ WGN+ VF T G ++++Y +D L+E L S ++++
Sbjct: 139 TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGH-YTTDSLVEALQSYNKDKVIMILNY 197
Query: 229 AHNPTGVDPTLQQWERIRQLMRS---KG--LLPFFDSAYQGFASGSLDSDAQSVRMFVA- 282
+NPTG PT ++ I + +++ KG ++ D AY G D + +F A
Sbjct: 198 PNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL----FYEDVYTQSLFTAL 253
Query: 283 -------------DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIR 329
DG K +G RVG ++ +E++VK +IR
Sbjct: 254 TNLHSNAILPIRLDGA--------TKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIR 305
Query: 330 PMYSNPPIHGASIVAAILRDR 350
S+ P+ S V +L++
Sbjct: 306 SNISSGPLPTQSAVKHVLKNN 326
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 34/277 (12%)
Query: 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADS 135
+N +G ++GK + L V + DRS + Y PI G ++ K+ + G
Sbjct: 40 INAALGTLLDDKGKIIALPSVYDRLDEX--DRSHIASYAPIEGEKDYRKIVIDTLFGPYK 97
Query: 136 PAIRENRVTTVQCLSGTGSLRV--------GAEFLARHYHQRTIYIPQPTWGNHPKVFTL 187
P E ++ + GTG++R G + Y+ W + K+
Sbjct: 98 P---EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYY----------WAPYRKICEE 144
Query: 188 AGLSVKSYRYY-DPATRGLNFQGLLEDLGSAPAGAIV-LLHACAHNPTGVDPTLQQWERI 245
G + K++ ++ D ++ D G + I L+++ +NPTG + ++W+ +
Sbjct: 145 FGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEV 204
Query: 246 RQLM------RSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF--IAQSYAKNL 297
+ + K + D AY FA G D + F F +A S +K+
Sbjct: 205 ITFLKEKAEDKDKKITLIVDVAYLEFA-GDGDQQRKFFEKFSNLPRNLFVVVAFSXSKSH 263
Query: 298 GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSN 334
YG R GA + + ++ E+ + R +SN
Sbjct: 264 TAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSN 300
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 208 QGLLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266
G DL + I+ C+ +NPTG T +Q ++ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYX 244
Query: 267 SGSLDSDAQSVRMFVADGGECFIAQ--SYAKNLGLYGERVGALSI 309
S D + +S+ F G E + S++K G G R+G I
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAXETASFSKYAGFTGVRLGWTVI 284
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 208 QGLLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266
G DL + I+ C+ +NPTG T +Q ++ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 267 SGSLDSDAQSVRMFVADGGE--CFIAQSYAKNLGLYGERVG 305
S D + +S+ F G E S++K G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSKYAGFTGVRLG 280
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 210 LLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268
DL P ++ C+ +NPTG + +Q ++ ++ G + FDSAY F
Sbjct: 203 FFPDLAMTPRTDVIFF--CSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIE- 259
Query: 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305
D +S+ S++K G G R+G
Sbjct: 260 --DGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLG 294
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 208 QGLLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266
G DL + I+ C+ +NPTG T +Q ++ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 267 SGSLDSDAQSVRMFVADGGE--CFIAQSYAKNLGLYGERVG 305
S D + +S+ F G E S+++ G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSQYAGFTGVRLG 280
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 208 QGLLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266
G DL + I+ C+ +NPTG T +Q ++ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 267 SGSLDSDAQSVRMFVADGGE--CFIAQSYAKNLGLYGERVG 305
S D + +S+ F G E S++ G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSNYAGFTGVRLG 280
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 171 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--PAGAIVLLHAC 228
+ IP P W ++P++ LA + P T F+ E + A P +++ +
Sbjct: 117 VIIPAPFWVSYPEMVKLA----EGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNT- 171
Query: 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG---G 285
NPTG+ T + I Q+ GL D Y+ L DAQ + + A
Sbjct: 172 PSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI----LYDDAQHLSIGAASPEAYE 227
Query: 286 ECFIAQSYAKNLGLYGERVGALS 308
+ +AK + G RVG L+
Sbjct: 228 RSVVCSGFAKTYAMTGWRVGFLA 250
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 161 FLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL--GSAP 218
LA H TI +P P++ H +AG V+S P G++F LE S P
Sbjct: 116 MLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV----PLVPGIDFFNELERAIRESIP 171
Query: 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262
+++L NPT L +ER+ L + ++ D AY
Sbjct: 172 KPRMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAY 214
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 211 LEDLGSAPAG----AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLL-----PFFDSA 261
L DL + P G A VLL +NPTG +E L R GL P+ D
Sbjct: 145 LADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQV 204
Query: 262 YQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305
Y+G A L R+ E F S +K+ L G R+G
Sbjct: 205 YEGEAPSPLALPGAKERVV-----ELF---SLSKSYNLAGFRLG 240
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 222 IVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280
I +L C+ +NPTG Q I +L FD+AY F S D
Sbjct: 164 IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFIS---DPSLPKSIFE 220
Query: 281 VADGGECFIA-QSYAKNLGLYGERVG 305
+ D C I S++K LG G R+G
Sbjct: 221 IPDARFCAIEINSFSKPLGFAGIRLG 246
>pdb|2WD6|A Chain A, Crystal Structure Of The Variable Domain Of The
Streptococcus Gordonii Surface Protein Sspb
pdb|2WD6|B Chain B, Crystal Structure Of The Variable Domain Of The
Streptococcus Gordonii Surface Protein Sspb
Length = 349
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA-QSVRMF 280
T ++ ++ ++ QLM G L F S +G SG++D DA +SVR F
Sbjct: 173 TNINVKVKFYDEEGQLMNLTGGLVNFSSLNRGNGSGAIDKDAIESVRNF 221
>pdb|2DRQ|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase D263g Mutant
Length = 396
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|1WU6|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase E70a Mutant Complexed With Xylobiose
Length = 396
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|2DRS|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase D263s Mutant
Length = 396
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|1WU4|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase
pdb|1WU5|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase Complexed With Xylose
Length = 396
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|2DRR|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase D263n Mutant
Length = 396
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|2DRO|A Chain A, Crystal Structure Of Reducing-End-Xylose Releasing
Exo-Oligoxylanase D263c Mutant
Length = 396
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 177 TWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233
+WG P + F LA L S+R+ D + N+ A LLH C HN
Sbjct: 122 SWGPAPDGEEYFALA-LFFASHRWGDGDEQPFNYS----------EQARKLLHTCVHNGE 170
Query: 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263
G P W R +L++ + F D +Y
Sbjct: 171 G-GPGHPMWNRDNKLIKFIPEVEFSDPSYH 199
>pdb|4GMO|A Chain A, Crystal Structure Of Syo1
Length = 684
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 50 SHVVRAPEDPI-------LGVTVAYNKDPSPVKLNLGVGAY 83
S+ + PEDP +GV + DP+P+++N VG +
Sbjct: 542 SNSIEEPEDPFQGLGVKCIGVVGSLAHDPAPIEVNREVGVF 582
>pdb|4GMN|A Chain A, Structural Basis Of Rpl5 Recognition By Syo1
Length = 676
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 50 SHVVRAPEDPI-------LGVTVAYNKDPSPVKLNLGVGAY 83
S+ + PEDP +GV + DP+P+++N VG +
Sbjct: 542 SNSIEEPEDPFQGLGVKCIGVVGSLAHDPAPIEVNREVGVF 582
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG--FASGSLDSDAQSVRMFVAD-GGEC 287
NP G T + + + KG+ D Y G F+S S S + ++ D E
Sbjct: 202 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 261
Query: 288 F----IAQSYAKNLGLYGERVGAL-----SIVCKTADVA--GRVESQVKLVIRPMYSNPP 336
+ + S +K+LGL G RVGA+ +V ++ G V SQ + ++ M S+
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321
Query: 337 I 337
+
Sbjct: 322 L 322
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG--FASGSLDSDAQSVRMFVADGGE-- 286
NP G T + + + KG+ D Y G F+S S S + ++ D
Sbjct: 202 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 261
Query: 287 ---CFIAQSYAKNLGLYGERVGAL-----SIVCKTADVA--GRVESQVKLVIRPMYSNPP 336
+ S +K+LGL G RVGA+ +V ++ G V SQ + ++ M S+
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321
Query: 337 I 337
+
Sbjct: 322 L 322
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG--FASGSLDSDAQSVRMFVAD-GGEC 287
NP G T + + + KG+ D Y G F+S S S + ++ D E
Sbjct: 200 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 259
Query: 288 F----IAQSYAKNLGLYGERVGAL-----SIVCKTADVA--GRVESQVKLVIRPMYSNPP 336
+ + S +K+LGL G RVGA+ +V ++ G V SQ + ++ M S+
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 319
Query: 337 I 337
+
Sbjct: 320 L 320
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 210 LLEDLGSAPAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268
DL A I+ C+ +NPTG T Q + R G + +D+AY + S
Sbjct: 200 FFPDLSKAKRTDIIFF--CSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYIS- 256
Query: 269 SLDSDAQSVRMFVADGGECFIAQ-SYAKNLGLYGERVG 305
+ D + E I S++K G G R+G
Sbjct: 257 --NPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLG 292
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,317,352
Number of Sequences: 62578
Number of extensions: 431639
Number of successful extensions: 1303
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1109
Number of HSP's gapped (non-prelim): 88
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)