Query 018820
Match_columns 350
No_of_seqs 236 out of 2260
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 04:18:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018820.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018820hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1411 Aspartate aminotransfe 100.0 4.2E-67 9.1E-72 475.1 23.3 304 46-350 25-328 (427)
2 COG1448 TyrB Aspartate/tyrosin 100.0 6.2E-66 1.4E-70 476.6 26.4 301 48-350 1-301 (396)
3 KOG1412 Aspartate aminotransfe 100.0 2.8E-62 6E-67 438.3 24.5 306 45-350 2-308 (410)
4 PLN02397 aspartate transaminas 100.0 4.1E-49 9E-54 387.4 33.2 303 46-349 21-323 (423)
5 PTZ00376 aspartate aminotransf 100.0 8.7E-49 1.9E-53 383.2 30.3 302 47-349 3-305 (404)
6 PRK09257 aromatic amino acid a 100.0 4.5E-48 9.7E-53 377.2 31.7 300 48-349 1-300 (396)
7 COG0436 Aspartate/tyrosine/aro 100.0 1.9E-46 4.2E-51 363.8 27.8 256 73-350 28-285 (393)
8 PLN02368 alanine transaminase 100.0 2.2E-41 4.7E-46 330.3 26.7 266 71-349 36-341 (407)
9 PLN00143 tyrosine/nicotianamin 100.0 1E-40 2.2E-45 326.8 28.0 275 60-349 19-296 (409)
10 PLN00175 aminotransferase fami 100.0 1.1E-40 2.4E-45 326.8 28.0 274 48-349 32-306 (413)
11 KOG0257 Kynurenine aminotransf 100.0 3E-41 6.4E-46 315.4 22.1 247 78-348 36-291 (420)
12 PLN02187 rooty/superroot1 100.0 3E-40 6.5E-45 327.6 29.1 277 59-349 48-330 (462)
13 PRK07681 aspartate aminotransf 100.0 3.7E-40 8E-45 321.8 26.3 255 71-349 30-286 (399)
14 PRK06348 aspartate aminotransf 100.0 3.9E-40 8.5E-45 320.1 26.3 269 55-349 13-281 (384)
15 PTZ00377 alanine aminotransfer 100.0 5.8E-40 1.3E-44 327.7 26.6 267 71-349 44-349 (481)
16 PRK08636 aspartate aminotransf 100.0 7.7E-40 1.7E-44 320.0 26.7 277 51-348 9-294 (403)
17 PRK09147 succinyldiaminopimela 100.0 1.2E-39 2.7E-44 317.8 27.5 272 52-348 5-291 (396)
18 PRK08637 hypothetical protein; 100.0 2.9E-39 6.3E-44 314.4 29.1 266 72-349 2-284 (388)
19 PRK13355 bifunctional HTH-doma 100.0 1.3E-39 2.9E-44 327.7 27.3 261 71-349 144-405 (517)
20 PLN02656 tyrosine transaminase 100.0 2.5E-39 5.5E-44 316.9 28.5 265 70-349 28-295 (409)
21 PRK07366 succinyldiaminopimela 100.0 1.7E-39 3.8E-44 315.9 26.5 255 71-346 28-284 (388)
22 PRK08068 transaminase; Reviewe 100.0 1.6E-39 3.6E-44 316.2 26.3 253 71-348 30-286 (389)
23 PRK12414 putative aminotransfe 100.0 2.1E-39 4.5E-44 315.1 26.8 273 48-349 7-282 (384)
24 PRK06207 aspartate aminotransf 100.0 2.9E-39 6.2E-44 316.1 27.5 254 72-349 38-298 (405)
25 TIGR01264 tyr_amTase_E tyrosin 100.0 3.1E-39 6.7E-44 315.5 27.5 276 58-349 14-292 (401)
26 TIGR03540 DapC_direct LL-diami 100.0 2.6E-39 5.7E-44 314.0 26.4 254 71-349 27-284 (383)
27 PRK09276 LL-diaminopimelate am 100.0 3.6E-39 7.8E-44 313.3 26.2 254 71-349 29-286 (385)
28 PLN00145 tyrosine/nicotianamin 100.0 1.2E-38 2.6E-43 313.8 29.1 263 72-349 51-316 (430)
29 PRK08960 hypothetical protein; 100.0 6.9E-39 1.5E-43 311.6 26.3 270 52-349 9-281 (387)
30 PLN02231 alanine transaminase 100.0 1.3E-38 2.9E-43 319.8 28.3 263 71-349 127-401 (534)
31 PRK05942 aspartate aminotransf 100.0 1E-38 2.2E-43 311.2 26.5 252 71-348 33-289 (394)
32 PRK06290 aspartate aminotransf 100.0 1.6E-38 3.6E-43 311.0 26.9 251 72-349 43-298 (410)
33 PRK06855 aminotransferase; Val 100.0 2.9E-38 6.2E-43 311.5 28.7 264 71-349 30-297 (433)
34 TIGR03538 DapC_gpp succinyldia 100.0 2.3E-38 5E-43 308.6 27.6 257 71-349 26-291 (393)
35 PRK09148 aminotransferase; Val 100.0 1.8E-38 3.9E-43 310.5 26.8 253 71-349 28-285 (405)
36 PTZ00433 tyrosine aminotransfe 100.0 3.2E-38 6.9E-43 309.4 27.9 273 62-349 21-301 (412)
37 PRK07309 aromatic amino acid a 100.0 5.2E-38 1.1E-42 305.9 28.1 275 50-349 9-284 (391)
38 PRK07683 aminotransferase A; V 100.0 3.6E-38 7.8E-43 306.7 26.6 253 72-349 27-280 (387)
39 PLN02450 1-aminocyclopropane-1 100.0 7.2E-38 1.6E-42 311.1 27.5 255 74-349 39-318 (468)
40 PRK07682 hypothetical protein; 100.0 4.4E-38 9.6E-43 304.9 25.2 250 73-349 20-273 (378)
41 PRK07337 aminotransferase; Val 100.0 5.1E-38 1.1E-42 305.6 25.4 251 71-349 28-279 (388)
42 PRK07550 hypothetical protein; 100.0 1E-37 2.2E-42 303.3 27.3 271 57-349 11-283 (386)
43 PRK07590 L,L-diaminopimelate a 100.0 3.6E-38 7.8E-43 308.8 24.1 259 62-349 22-308 (409)
44 PRK07324 transaminase; Validat 100.0 4.9E-38 1.1E-42 304.3 24.3 246 71-349 24-269 (373)
45 PRK08912 hypothetical protein; 100.0 9.4E-38 2E-42 303.6 26.0 250 72-348 25-278 (387)
46 PRK09082 methionine aminotrans 100.0 6.7E-38 1.5E-42 304.6 24.5 261 60-348 19-282 (386)
47 COG1167 ARO8 Transcriptional r 100.0 1.1E-37 2.3E-42 308.7 25.6 257 71-349 87-345 (459)
48 PRK06108 aspartate aminotransf 100.0 1.8E-37 3.8E-42 300.7 26.6 256 72-349 23-279 (382)
49 PRK06107 aspartate aminotransf 100.0 1.4E-37 3.1E-42 303.9 25.9 256 71-349 31-288 (402)
50 PRK05839 hypothetical protein; 100.0 1.8E-37 3.8E-42 300.5 26.0 261 63-349 14-279 (374)
51 PRK05957 aspartate aminotransf 100.0 2.8E-37 6E-42 300.6 27.0 254 72-349 26-280 (389)
52 PLN02607 1-aminocyclopropane-1 100.0 3.4E-37 7.4E-42 304.3 27.2 260 71-350 44-326 (447)
53 PLN02376 1-aminocyclopropane-1 100.0 6.6E-37 1.4E-41 305.7 27.9 260 74-349 47-325 (496)
54 PRK07777 aminotransferase; Val 100.0 9.3E-37 2E-41 296.6 27.1 269 52-349 6-279 (387)
55 TIGR03537 DapC succinyldiamino 100.0 7.7E-37 1.7E-41 293.4 26.0 248 75-349 2-253 (350)
56 PRK08361 aspartate aminotransf 100.0 5.3E-37 1.1E-41 298.8 24.8 267 52-349 14-284 (391)
57 PRK08175 aminotransferase; Val 100.0 1.1E-36 2.5E-41 296.9 27.2 257 71-349 27-284 (395)
58 PRK09265 aminotransferase AlaT 100.0 1.9E-36 4.2E-41 296.1 28.4 261 71-349 31-292 (404)
59 TIGR01265 tyr_nico_aTase tyros 100.0 1.8E-36 4E-41 296.2 27.5 277 58-349 14-294 (403)
60 PRK15481 transcriptional regul 100.0 4.2E-37 9.1E-42 303.2 23.2 244 72-349 84-328 (431)
61 PF00155 Aminotran_1_2: Aminot 100.0 5.7E-37 1.2E-41 295.0 21.5 260 74-349 2-266 (363)
62 TIGR03542 DAPAT_plant LL-diami 100.0 1.8E-36 3.8E-41 296.2 24.7 253 71-349 31-301 (402)
63 PRK05764 aspartate aminotransf 100.0 4E-36 8.8E-41 292.5 26.4 277 48-348 4-284 (393)
64 PRK08363 alanine aminotransfer 100.0 6.6E-36 1.4E-40 291.7 27.9 261 71-349 28-289 (398)
65 PRK07865 N-succinyldiaminopime 100.0 2.5E-36 5.4E-41 291.3 23.2 261 48-349 3-270 (364)
66 KOG0259 Tyrosine aminotransfer 100.0 7.7E-36 1.7E-40 274.9 24.7 276 58-349 42-325 (447)
67 PRK07568 aspartate aminotransf 100.0 1.1E-35 2.3E-40 289.9 27.3 253 72-349 29-282 (397)
68 PRK09275 aspartate aminotransf 100.0 2.2E-36 4.7E-41 300.9 22.7 245 74-342 101-388 (527)
69 PRK02610 histidinol-phosphate 100.0 9.1E-36 2E-40 288.5 26.2 248 73-349 28-279 (374)
70 PRK01533 histidinol-phosphate 100.0 7.5E-36 1.6E-40 288.3 21.4 240 72-349 28-267 (366)
71 PRK06836 aspartate aminotransf 100.0 7.1E-35 1.5E-39 284.2 27.6 258 72-349 32-298 (394)
72 PRK06358 threonine-phosphate d 100.0 1.1E-34 2.3E-39 279.1 25.4 250 63-349 10-259 (354)
73 PRK14809 histidinol-phosphate 100.0 1.4E-34 3.1E-39 278.3 25.8 247 63-349 21-267 (357)
74 PRK09440 avtA valine--pyruvate 100.0 6.2E-35 1.3E-39 286.4 23.1 249 72-349 29-295 (416)
75 TIGR03539 DapC_actino succinyl 100.0 2.1E-34 4.6E-39 277.3 23.1 250 59-349 8-264 (357)
76 TIGR03801 asp_4_decarbox aspar 100.0 1.8E-34 3.8E-39 286.9 22.7 219 74-316 95-329 (521)
77 PRK03317 histidinol-phosphate 100.0 3.9E-34 8.5E-39 276.4 23.5 246 74-349 27-273 (368)
78 PRK03158 histidinol-phosphate 100.0 2.7E-34 5.9E-39 276.5 22.1 239 73-349 29-267 (359)
79 PRK05166 histidinol-phosphate 100.0 3.6E-34 7.8E-39 277.0 22.9 243 72-349 35-277 (371)
80 PRK09105 putative aminotransfe 100.0 4.4E-34 9.6E-39 276.3 22.4 236 72-349 42-277 (370)
81 PRK08056 threonine-phosphate d 100.0 2.4E-33 5.2E-38 269.8 24.7 249 62-349 10-258 (356)
82 PRK05387 histidinol-phosphate 100.0 1.9E-33 4E-38 269.9 22.9 234 73-349 24-258 (353)
83 PRK08153 histidinol-phosphate 100.0 3.5E-33 7.6E-38 270.0 23.6 238 72-349 31-268 (369)
84 PRK03967 histidinol-phosphate 100.0 6.6E-33 1.4E-37 264.9 24.4 232 73-349 18-249 (337)
85 PRK07392 threonine-phosphate d 100.0 4.9E-33 1.1E-37 268.0 23.7 237 72-349 21-261 (360)
86 COG1168 MalY Bifunctional PLP- 100.0 1.2E-32 2.6E-37 255.4 25.2 255 72-348 24-280 (388)
87 PLN03026 histidinol-phosphate 100.0 8E-33 1.7E-37 268.5 25.2 234 72-349 51-285 (380)
88 COG0079 HisC Histidinol-phosph 100.0 5.8E-33 1.2E-37 265.6 23.4 235 74-349 23-257 (356)
89 PRK04870 histidinol-phosphate 100.0 7.1E-33 1.5E-37 266.4 23.3 238 72-349 25-262 (356)
90 PRK14808 histidinol-phosphate 100.0 1.7E-32 3.8E-37 261.8 24.3 230 72-349 18-247 (335)
91 PRK14807 histidinol-phosphate 100.0 7.5E-32 1.6E-36 259.0 25.2 236 73-349 22-258 (351)
92 KOG0256 1-aminocyclopropane-1- 100.0 4.8E-32 1E-36 251.9 21.7 226 111-350 115-350 (471)
93 PRK06225 aspartate aminotransf 100.0 1.2E-31 2.6E-36 260.1 25.1 243 72-348 27-270 (380)
94 PRK08354 putative aminotransfe 100.0 6.3E-32 1.4E-36 255.3 22.2 218 72-349 7-224 (311)
95 PRK03321 putative aminotransfe 100.0 3.9E-32 8.4E-37 260.8 20.5 239 73-348 22-260 (352)
96 PRK01688 histidinol-phosphate 100.0 4.8E-32 1E-36 260.4 19.1 229 74-349 29-258 (351)
97 PRK04781 histidinol-phosphate 100.0 1.3E-31 2.9E-36 258.5 21.0 210 111-349 54-265 (364)
98 PLN02672 methionine S-methyltr 100.0 5E-31 1.1E-35 277.4 26.9 229 71-320 695-933 (1082)
99 PRK05664 threonine-phosphate d 100.0 3E-31 6.4E-36 252.8 22.9 218 73-349 20-237 (330)
100 PRK02731 histidinol-phosphate 100.0 4.8E-31 1E-35 254.5 23.5 240 72-349 31-270 (367)
101 TIGR01140 L_thr_O3P_dcar L-thr 100.0 8.8E-31 1.9E-35 249.5 21.6 236 59-349 4-239 (330)
102 PRK04635 histidinol-phosphate 100.0 3.6E-31 7.7E-36 254.6 18.9 228 73-349 31-259 (354)
103 PRK06959 putative threonine-ph 100.0 5E-31 1.1E-35 252.1 19.5 220 73-349 24-243 (339)
104 TIGR01141 hisC histidinol-phos 100.0 1.9E-30 4.1E-35 248.4 22.5 237 73-349 19-255 (346)
105 PRK06425 histidinol-phosphate 100.0 1.3E-30 2.9E-35 248.5 21.2 204 74-329 17-220 (332)
106 PRK07908 hypothetical protein; 100.0 3.8E-30 8.3E-35 246.9 24.5 229 71-348 20-248 (349)
107 PRK00950 histidinol-phosphate 100.0 2.2E-29 4.8E-34 242.4 24.8 236 72-349 33-268 (361)
108 KOG0634 Aromatic amino acid am 100.0 7.9E-28 1.7E-32 225.5 20.9 224 110-348 93-340 (472)
109 cd00609 AAT_like Aspartate ami 99.9 4.4E-25 9.6E-30 209.9 24.3 250 76-349 1-252 (350)
110 PRK13238 tnaA tryptophanase/L- 99.9 9.3E-25 2E-29 216.2 22.6 250 71-347 34-309 (460)
111 KOG0258 Alanine aminotransfera 99.9 3.1E-24 6.8E-29 198.7 20.5 250 91-349 87-346 (475)
112 COG3977 Alanine-alpha-ketoisov 99.9 4.7E-23 1E-27 185.2 17.5 267 59-349 15-295 (417)
113 PRK07049 methionine gamma-lyas 99.9 1.2E-21 2.5E-26 192.7 22.7 197 116-348 82-288 (427)
114 KOG0633 Histidinol phosphate a 99.9 7.9E-23 1.7E-27 180.6 10.9 190 136-349 82-272 (375)
115 cd00617 Tnase_like Tryptophana 99.9 1.9E-21 4.1E-26 190.5 21.7 224 71-321 9-257 (431)
116 PRK06939 2-amino-3-ketobutyrat 99.9 3.9E-20 8.4E-25 180.0 23.2 224 71-327 40-267 (397)
117 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.4E-20 1.2E-24 178.5 24.0 223 71-327 31-255 (385)
118 TIGR00858 bioF 8-amino-7-oxono 99.9 6.9E-20 1.5E-24 175.5 24.1 221 71-328 14-240 (360)
119 TIGR01822 2am3keto_CoA 2-amino 99.9 1.7E-19 3.7E-24 175.5 24.1 217 71-327 36-263 (393)
120 PRK06234 methionine gamma-lyas 99.8 2.3E-19 5E-24 175.3 22.9 192 113-347 58-260 (400)
121 PRK10534 L-threonine aldolase; 99.8 4.4E-20 9.5E-25 175.9 17.2 232 76-347 2-242 (333)
122 PLN02242 methionine gamma-lyas 99.8 1.5E-19 3.3E-24 177.2 19.2 188 116-346 75-270 (418)
123 cd06502 TA_like Low-specificit 99.8 3.5E-19 7.7E-24 169.5 19.4 224 93-349 11-243 (338)
124 PLN02721 threonine aldolase 99.8 5.7E-19 1.2E-23 169.1 20.8 210 74-316 6-224 (353)
125 TIGR00707 argD acetylornithine 99.8 7.7E-19 1.7E-23 170.1 21.8 246 72-348 26-284 (379)
126 TIGR03576 pyridox_MJ0158 pyrid 99.8 6.1E-19 1.3E-23 169.0 20.8 191 119-349 56-249 (346)
127 PRK05958 8-amino-7-oxononanoat 99.8 4.6E-18 9.9E-23 164.6 23.9 219 71-327 37-261 (385)
128 PRK02627 acetylornithine amino 99.8 2E-18 4.3E-23 168.2 21.3 247 71-348 37-296 (396)
129 TIGR03392 FeS_syn_CsdA cystein 99.8 7.3E-18 1.6E-22 164.6 23.3 204 74-312 16-232 (398)
130 TIGR02080 O_succ_thio_ly O-suc 99.8 6.5E-18 1.4E-22 164.0 20.2 192 115-345 49-242 (382)
131 PLN02822 serine palmitoyltrans 99.8 5E-18 1.1E-22 169.4 19.6 240 71-347 107-360 (481)
132 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8.3E-18 1.8E-22 162.1 20.1 165 119-312 46-215 (361)
133 PRK08045 cystathionine gamma-s 99.8 1E-17 2.3E-22 162.7 20.6 192 115-348 50-246 (386)
134 PRK08249 cystathionine gamma-s 99.8 7.8E-18 1.7E-22 164.3 19.5 189 116-346 63-255 (398)
135 PRK08133 O-succinylhomoserine 99.8 1.2E-17 2.5E-22 162.8 20.2 183 119-343 63-249 (390)
136 cd06454 KBL_like KBL_like; thi 99.8 1.9E-17 4.1E-22 158.3 21.0 164 119-312 48-214 (349)
137 PLN02483 serine palmitoyltrans 99.8 3.6E-17 7.9E-22 163.5 23.3 224 72-329 99-335 (489)
138 PRK07504 O-succinylhomoserine 99.8 1.7E-17 3.7E-22 162.0 20.0 190 117-347 65-258 (398)
139 PRK03244 argD acetylornithine 99.8 1.9E-17 4.2E-22 161.6 20.1 241 71-348 41-297 (398)
140 PRK07503 methionine gamma-lyas 99.8 1.9E-17 4.1E-22 161.9 20.0 188 117-347 65-259 (403)
141 PRK07811 cystathionine gamma-s 99.8 2.6E-17 5.6E-22 160.2 20.5 191 115-347 59-254 (388)
142 PRK06460 hypothetical protein; 99.8 1.9E-17 4.1E-22 160.6 19.3 184 116-342 44-232 (376)
143 PRK10874 cysteine sulfinate de 99.8 4.3E-17 9.2E-22 159.3 22.0 165 119-312 65-235 (401)
144 PRK13392 5-aminolevulinate syn 99.8 3.8E-17 8.3E-22 160.2 21.2 239 73-348 46-293 (410)
145 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 2.8E-17 6.1E-22 159.1 19.9 178 119-329 53-234 (370)
146 PF12897 Aminotran_MocR: Alani 99.8 3.3E-17 7.1E-22 153.2 19.3 220 109-349 60-300 (425)
147 cd00378 SHMT Serine-glycine hy 99.8 2.4E-17 5.2E-22 161.0 19.5 206 73-316 19-241 (402)
148 TIGR00713 hemL glutamate-1-sem 99.8 5.3E-17 1.1E-21 159.9 21.3 248 71-348 46-311 (423)
149 PRK08776 cystathionine gamma-s 99.8 3.7E-17 8E-22 159.8 19.9 188 119-348 62-254 (405)
150 PRK01278 argD acetylornithine 99.8 6.4E-17 1.4E-21 157.5 21.4 247 71-347 29-288 (389)
151 cd00613 GDC-P Glycine cleavage 99.8 5.5E-17 1.2E-21 158.1 20.4 200 74-312 21-239 (398)
152 cd00610 OAT_like Acetyl ornith 99.8 9.8E-17 2.1E-21 157.0 21.2 252 71-347 34-306 (413)
153 PRK07050 cystathionine beta-ly 99.8 1.5E-16 3.2E-21 155.2 21.8 189 116-346 64-257 (394)
154 PRK06767 methionine gamma-lyas 99.7 1.4E-16 3E-21 155.1 20.9 191 115-347 59-254 (386)
155 TIGR01328 met_gam_lyase methio 99.7 9E-17 2E-21 156.5 19.2 190 118-347 60-253 (391)
156 TIGR01979 sufS cysteine desulf 99.7 4.3E-16 9.3E-21 152.2 22.9 206 72-312 16-234 (403)
157 PRK07582 cystathionine gamma-l 99.7 1.1E-16 2.5E-21 154.6 18.4 188 115-348 49-241 (366)
158 TIGR01325 O_suc_HS_sulf O-succ 99.7 2.9E-16 6.3E-21 152.5 20.9 185 118-344 55-243 (380)
159 PRK08861 cystathionine gamma-s 99.7 1.9E-16 4.2E-21 153.7 19.5 191 115-347 51-246 (388)
160 PRK09295 bifunctional cysteine 99.7 2.7E-16 6E-21 153.9 20.3 165 119-312 69-239 (406)
161 PRK08574 cystathionine gamma-s 99.7 3.2E-16 7E-21 152.3 20.4 187 116-345 52-243 (385)
162 PRK08247 cystathionine gamma-s 99.7 4.8E-16 1E-20 150.3 21.4 189 116-347 51-244 (366)
163 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.9E-16 6.2E-21 154.4 19.9 156 117-308 57-216 (418)
164 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.4E-16 3.1E-21 154.3 17.4 154 140-322 46-205 (376)
165 PRK07179 hypothetical protein; 99.7 1.6E-15 3.5E-20 148.6 24.6 220 71-327 52-273 (407)
166 TIGR01976 am_tr_V_VC1184 cyste 99.7 4.4E-16 9.4E-21 151.8 20.2 203 75-312 18-230 (397)
167 PRK07810 O-succinylhomoserine 99.7 3.8E-16 8.3E-21 152.6 19.4 191 116-348 69-264 (403)
168 cd06453 SufS_like Cysteine des 99.7 6E-16 1.3E-20 149.5 20.5 164 118-312 44-214 (373)
169 cd00614 CGS_like CGS_like: Cys 99.7 5.9E-16 1.3E-20 149.8 20.5 191 115-347 38-233 (369)
170 PRK02948 cysteine desulfurase; 99.7 2.2E-16 4.7E-21 153.2 17.3 162 119-308 45-211 (381)
171 PLN02855 Bifunctional selenocy 99.7 6.3E-16 1.4E-20 152.3 20.4 165 119-312 78-248 (424)
172 PRK11658 UDP-4-amino-4-deoxy-L 99.7 7E-16 1.5E-20 149.8 20.2 169 118-321 34-204 (379)
173 cd00615 Orn_deC_like Ornithine 99.7 1.6E-16 3.4E-21 149.2 15.0 172 113-308 55-231 (294)
174 cd06451 AGAT_like Alanine-glyo 99.7 9.6E-16 2.1E-20 147.2 20.2 164 119-312 34-200 (356)
175 TIGR01437 selA_rel uncharacter 99.7 2.3E-15 5E-20 145.3 22.2 192 74-312 9-222 (363)
176 PRK13479 2-aminoethylphosphona 99.7 1.1E-15 2.5E-20 147.5 19.9 167 118-312 38-207 (368)
177 PRK09028 cystathionine beta-ly 99.7 1.3E-15 2.9E-20 147.9 19.7 194 111-347 53-253 (394)
178 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 3.1E-15 6.7E-20 143.2 21.9 193 88-312 6-201 (355)
179 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 4.6E-15 1E-19 144.5 23.0 167 118-312 64-234 (387)
180 cd06450 DOPA_deC_like DOPA dec 99.7 6.9E-16 1.5E-20 147.4 15.9 198 93-308 12-228 (345)
181 PRK05939 hypothetical protein; 99.7 7.4E-15 1.6E-19 143.3 22.5 160 111-308 39-205 (397)
182 PRK02936 argD acetylornithine 99.7 1E-14 2.2E-19 141.4 23.4 247 71-348 27-281 (377)
183 PRK00451 glycine dehydrogenase 99.7 1.7E-15 3.7E-20 150.2 17.6 198 74-312 69-283 (447)
184 PRK09064 5-aminolevulinate syn 99.7 1.2E-14 2.5E-19 142.5 22.8 219 73-329 46-272 (407)
185 PRK05093 argD bifunctional N-s 99.7 9.5E-15 2.1E-19 143.0 21.7 180 140-347 97-297 (403)
186 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 4.9E-15 1.1E-19 143.7 19.2 169 120-319 30-201 (375)
187 PRK08248 O-acetylhomoserine am 99.7 8.2E-15 1.8E-19 144.3 20.7 154 119-308 66-223 (431)
188 cd01494 AAT_I Aspartate aminot 99.7 4.2E-15 9.2E-20 126.4 16.2 164 120-308 3-168 (170)
189 PLN02409 serine--glyoxylate am 99.7 1.2E-14 2.7E-19 142.2 21.6 172 117-312 38-215 (401)
190 PRK08088 4-aminobutyrate amino 99.7 1.7E-14 3.6E-19 142.3 22.5 252 71-348 39-313 (425)
191 PRK07671 cystathionine beta-ly 99.7 7.6E-15 1.6E-19 142.4 19.7 183 119-344 52-239 (377)
192 PRK06702 O-acetylhomoserine am 99.7 5E-15 1.1E-19 145.2 17.8 193 119-348 63-287 (432)
193 TIGR01821 5aminolev_synth 5-am 99.6 2.2E-14 4.8E-19 140.3 22.1 239 73-347 45-291 (402)
194 PRK06084 O-acetylhomoserine am 99.6 9.6E-15 2.1E-19 143.6 19.5 155 118-308 59-217 (425)
195 PRK08064 cystathionine beta-ly 99.6 1.2E-14 2.6E-19 141.6 20.0 181 119-342 56-241 (390)
196 TIGR03403 nifS_epsilon cystein 99.6 3.4E-15 7.4E-20 145.0 16.1 169 116-308 38-213 (382)
197 PRK04073 rocD ornithine--oxo-a 99.6 3.9E-14 8.5E-19 138.3 23.2 183 140-348 97-301 (396)
198 TIGR01329 cysta_beta_ly_E cyst 99.6 2.4E-14 5.2E-19 139.0 20.3 191 111-344 39-236 (378)
199 PRK07269 cystathionine gamma-s 99.6 1.7E-14 3.7E-19 139.2 18.9 193 115-348 52-245 (364)
200 PLN02509 cystathionine beta-ly 99.6 3.4E-14 7.3E-19 140.6 20.2 164 110-308 124-292 (464)
201 TIGR01324 cysta_beta_ly_B cyst 99.6 6.2E-14 1.3E-18 135.9 21.5 191 111-345 42-240 (377)
202 PRK06176 cystathionine gamma-s 99.6 2.9E-14 6.2E-19 138.5 18.6 159 119-315 52-214 (380)
203 PRK13393 5-aminolevulinate syn 99.6 1.4E-13 3E-18 134.9 23.5 239 73-347 45-291 (406)
204 TIGR01977 am_tr_V_EF2568 cyste 99.6 5E-14 1.1E-18 136.2 20.0 164 117-308 44-211 (376)
205 TIGR02326 transamin_PhnW 2-ami 99.6 5.8E-14 1.3E-18 135.3 19.9 165 120-312 38-205 (363)
206 PRK05967 cystathionine beta-ly 99.6 5E-14 1.1E-18 136.8 19.0 170 140-345 80-254 (395)
207 PRK07505 hypothetical protein; 99.6 2.1E-13 4.6E-18 133.4 23.2 194 119-346 93-295 (402)
208 PRK12381 bifunctional succinyl 99.6 2E-13 4.4E-18 133.8 22.8 186 140-347 96-296 (406)
209 PRK05968 hypothetical protein; 99.6 1E-13 2.2E-18 135.1 20.5 185 119-347 65-255 (389)
210 PLN03227 serine palmitoyltrans 99.6 1.7E-13 3.8E-18 133.6 22.1 183 113-326 39-231 (392)
211 PRK04260 acetylornithine amino 99.6 2.7E-13 5.9E-18 131.4 23.3 241 72-348 28-279 (375)
212 PRK14012 cysteine desulfurase; 99.6 6.1E-14 1.3E-18 137.3 18.0 166 118-313 50-220 (404)
213 PRK00011 glyA serine hydroxyme 99.6 1.2E-13 2.6E-18 135.6 20.1 150 141-316 89-245 (416)
214 TIGR03812 tyr_de_CO2_Arch tyro 99.6 6.9E-14 1.5E-18 135.1 17.9 175 120-315 62-242 (373)
215 TIGR03531 selenium_SpcS O-phos 99.6 2.3E-13 5E-18 133.6 21.3 184 141-347 124-316 (444)
216 TIGR03588 PseC UDP-4-keto-6-de 99.6 1.9E-13 4.2E-18 132.7 20.1 178 113-321 25-207 (380)
217 PRK00854 rocD ornithine--oxo-a 99.6 5.4E-13 1.2E-17 130.4 23.0 196 119-348 85-302 (401)
218 PRK15407 lipopolysaccharide bi 99.6 2.3E-13 5E-18 134.4 20.2 206 77-321 27-243 (438)
219 PRK13520 L-tyrosine decarboxyl 99.5 3.9E-13 8.5E-18 129.6 19.2 174 120-315 62-237 (371)
220 PTZ00125 ornithine aminotransf 99.5 1.5E-12 3.2E-17 127.2 23.3 188 141-347 89-292 (400)
221 TIGR02006 IscS cysteine desulf 99.5 3.7E-13 8.1E-18 131.7 18.7 163 118-308 48-215 (402)
222 TIGR03235 DNA_S_dndA cysteine 99.5 4E-13 8.6E-18 129.1 17.1 164 119-312 44-213 (353)
223 PRK05994 O-acetylhomoserine am 99.5 4.1E-13 8.9E-18 132.3 16.5 155 119-309 65-223 (427)
224 PRK00062 glutamate-1-semialdeh 99.5 2.4E-12 5.2E-17 127.0 21.5 242 71-347 48-312 (426)
225 PRK09792 4-aminobutyrate trans 99.5 5.8E-12 1.3E-16 124.0 23.4 186 141-344 102-308 (421)
226 PRK04366 glycine dehydrogenase 99.5 1.3E-12 2.8E-17 130.8 18.8 203 76-308 71-288 (481)
227 PRK08360 4-aminobutyrate amino 99.5 1.3E-11 2.8E-16 122.2 24.3 254 71-348 39-318 (443)
228 cd00616 AHBA_syn 3-amino-5-hyd 99.5 2.7E-12 5.9E-17 122.8 18.8 171 115-320 16-189 (352)
229 PLN00144 acetylornithine trans 99.5 5.6E-12 1.2E-16 122.6 21.2 193 122-344 58-277 (382)
230 PRK04612 argD acetylornithine 99.4 2.1E-11 4.5E-16 119.5 23.3 202 123-348 84-301 (408)
231 TIGR03402 FeS_nifS cysteine de 99.4 4.2E-12 9.2E-17 123.1 17.9 162 119-308 44-209 (379)
232 TIGR01885 Orn_aminotrans ornit 99.4 3.6E-11 7.8E-16 117.7 23.6 197 120-347 82-300 (401)
233 TIGR03246 arg_catab_astC succi 99.4 3E-11 6.5E-16 118.1 22.6 180 140-347 92-292 (397)
234 TIGR00700 GABAtrnsam 4-aminobu 99.4 4E-11 8.6E-16 118.1 22.9 190 141-347 95-310 (420)
235 PLN02624 ornithine-delta-amino 99.4 6.2E-11 1.4E-15 118.4 24.5 243 72-347 74-338 (474)
236 PRK06777 4-aminobutyrate amino 99.4 5.4E-11 1.2E-15 117.2 23.0 191 140-348 101-312 (421)
237 PRK06918 4-aminobutyrate amino 99.4 5.2E-11 1.1E-15 118.3 22.2 189 141-347 116-332 (451)
238 PF01041 DegT_DnrJ_EryC1: DegT 99.4 1.8E-11 4E-16 118.2 16.8 169 119-321 27-197 (363)
239 PLN02651 cysteine desulfurase 99.4 2E-11 4.3E-16 117.9 17.0 162 119-308 45-211 (364)
240 PRK05937 8-amino-7-oxononanoat 99.4 1.1E-10 2.5E-15 113.0 22.2 206 73-303 4-220 (370)
241 PRK08134 O-acetylhomoserine am 99.4 1.7E-11 3.7E-16 120.9 16.5 162 111-308 56-223 (433)
242 PRK07495 4-aminobutyrate amino 99.3 1.3E-10 2.8E-15 114.5 21.1 186 141-345 102-309 (425)
243 COG0399 WecE Predicted pyridox 99.3 5.4E-11 1.2E-15 113.8 17.4 170 119-321 36-206 (374)
244 PLN02955 8-amino-7-oxononanoat 99.3 1.2E-09 2.7E-14 107.7 24.0 222 72-330 101-344 (476)
245 PRK07812 O-acetylhomoserine am 99.3 4.1E-10 8.8E-15 111.1 20.3 163 112-309 62-230 (436)
246 PRK08114 cystathionine beta-ly 99.3 5E-10 1.1E-14 108.9 19.2 183 120-345 65-254 (395)
247 PF01053 Cys_Met_Meta_PP: Cys/ 99.3 3.2E-10 6.9E-15 110.0 17.8 196 111-347 47-250 (386)
248 COG0520 csdA Selenocysteine ly 99.2 1.9E-09 4.1E-14 105.4 21.6 167 118-312 67-238 (405)
249 PRK08117 4-aminobutyrate amino 99.2 1.9E-09 4.1E-14 106.7 21.8 192 140-348 103-321 (433)
250 PRK05613 O-acetylhomoserine am 99.2 1.8E-09 3.9E-14 106.6 20.3 163 111-308 61-229 (437)
251 TIGR02618 tyr_phenol_ly tyrosi 99.2 2.1E-09 4.5E-14 105.0 20.0 204 94-322 50-276 (450)
252 TIGR00709 dat 2,4-diaminobutyr 99.2 1E-08 2.3E-13 101.6 23.6 183 148-347 108-318 (442)
253 COG0626 MetC Cystathionine bet 99.2 4.6E-09 9.9E-14 101.3 20.3 186 119-345 65-256 (396)
254 PRK04311 selenocysteine syntha 99.2 8.2E-09 1.8E-13 102.5 22.5 208 74-308 80-304 (464)
255 KOG1549 Cysteine desulfurase N 99.1 3E-09 6.5E-14 101.9 17.7 207 71-308 40-254 (428)
256 PRK06058 4-aminobutyrate amino 99.1 2E-08 4.4E-13 99.6 23.5 253 71-347 54-332 (443)
257 PRK06434 cystathionine gamma-l 99.1 4.9E-09 1.1E-13 101.9 18.0 188 111-344 56-251 (384)
258 PF01212 Beta_elim_lyase: Beta 99.1 2.5E-09 5.4E-14 100.0 14.7 204 93-323 8-218 (290)
259 TIGR02407 ectoine_ectB diamino 99.1 3E-08 6.5E-13 97.5 21.5 155 148-312 105-278 (412)
260 KOG0053 Cystathionine beta-lya 99.0 9.1E-09 2E-13 98.4 16.8 172 141-345 93-268 (409)
261 PRK05964 adenosylmethionine--8 99.0 3.5E-08 7.7E-13 97.3 21.8 169 140-324 102-291 (423)
262 TIGR00474 selA seryl-tRNA(sec) 99.0 3.4E-08 7.4E-13 97.8 21.2 210 74-312 75-301 (454)
263 PRK13237 tyrosine phenol-lyase 99.0 1.9E-08 4.2E-13 98.5 18.5 188 112-321 73-282 (460)
264 COG0156 BioF 7-keto-8-aminopel 99.0 8.7E-08 1.9E-12 92.6 22.8 222 72-330 38-267 (388)
265 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 1.3E-09 2.8E-14 105.8 9.6 195 116-328 64-272 (417)
266 PF00266 Aminotran_5: Aminotra 99.0 5E-08 1.1E-12 94.4 20.5 165 119-312 45-214 (371)
267 PLN02994 1-aminocyclopropane-1 99.0 1.2E-09 2.7E-14 92.3 8.1 64 113-180 88-153 (153)
268 PRK08593 4-aminobutyrate amino 99.0 1.2E-07 2.7E-12 94.0 23.5 188 141-346 104-319 (445)
269 PRK09264 diaminobutyrate--2-ox 99.0 9.7E-08 2.1E-12 94.3 22.2 161 142-312 104-282 (425)
270 PRK06541 hypothetical protein; 98.9 3.1E-07 6.8E-12 91.5 24.3 160 140-312 112-305 (460)
271 PF06838 Met_gamma_lyase: Meth 98.9 9.9E-08 2.2E-12 89.6 18.4 178 118-322 55-247 (403)
272 PLN03032 serine decarboxylase; 98.9 2.9E-08 6.3E-13 96.0 15.5 159 140-312 83-248 (374)
273 PRK02769 histidine decarboxyla 98.9 6.8E-08 1.5E-12 93.8 17.4 153 148-312 90-245 (380)
274 PRK03715 argD acetylornithine 98.9 2.3E-07 4.9E-12 90.8 21.2 216 71-312 34-262 (395)
275 TIGR01814 kynureninase kynuren 98.9 6.5E-08 1.4E-12 94.9 16.7 143 140-301 86-240 (406)
276 PRK13034 serine hydroxymethylt 98.9 1.2E-07 2.6E-12 93.4 18.4 218 59-314 15-246 (416)
277 PRK05769 4-aminobutyrate amino 98.8 8.9E-07 1.9E-11 87.8 23.1 189 141-347 116-333 (441)
278 COG2873 MET17 O-acetylhomoseri 98.8 8.6E-08 1.9E-12 89.9 13.2 159 119-313 64-226 (426)
279 PRK13580 serine hydroxymethylt 98.8 3.9E-07 8.4E-12 90.4 18.5 239 59-338 36-320 (493)
280 TIGR03372 putres_am_tran putre 98.8 1.7E-06 3.7E-11 85.7 22.3 213 71-312 73-308 (442)
281 PRK15029 arginine decarboxylas 98.8 1.8E-07 3.9E-12 97.3 15.7 194 116-328 203-419 (755)
282 PF04864 Alliinase_C: Allinase 98.8 4.5E-08 9.7E-13 91.2 9.9 190 119-347 45-240 (363)
283 PLN02482 glutamate-1-semialdeh 98.7 2.9E-06 6.3E-11 84.8 22.5 218 71-324 97-335 (474)
284 PRK00615 glutamate-1-semialdeh 98.7 2.4E-06 5.3E-11 84.4 21.7 165 141-324 111-290 (433)
285 PRK04013 argD acetylornithine/ 98.7 1.8E-06 3.8E-11 83.5 20.2 206 71-308 22-242 (364)
286 PLN03226 serine hydroxymethylt 98.7 1.7E-06 3.7E-11 86.5 20.7 149 140-308 97-257 (475)
287 COG0076 GadB Glutamate decarbo 98.7 1.4E-06 3.1E-11 86.4 19.7 211 90-320 72-298 (460)
288 COG1104 NifS Cysteine sulfinat 98.7 2.3E-07 5E-12 88.7 12.9 139 107-261 32-179 (386)
289 PRK12389 glutamate-1-semialdeh 98.7 7.5E-06 1.6E-10 81.0 23.5 167 140-324 109-289 (428)
290 COG2008 GLY1 Threonine aldolas 98.6 2.5E-06 5.4E-11 80.1 17.7 201 93-321 13-221 (342)
291 PRK11522 putrescine--2-oxoglut 98.6 5.7E-06 1.2E-10 82.5 20.9 160 140-312 141-315 (459)
292 PRK05639 4-aminobutyrate amino 98.6 1.2E-05 2.5E-10 80.2 23.1 160 141-312 114-305 (457)
293 TIGR01788 Glu-decarb-GAD gluta 98.6 1.2E-06 2.5E-11 86.6 15.6 157 141-314 100-277 (431)
294 PLN02263 serine decarboxylase 98.6 1.8E-06 3.9E-11 85.4 16.8 197 94-308 105-313 (470)
295 PRK15400 lysine decarboxylase 98.6 1.2E-06 2.6E-11 90.5 14.3 176 115-308 192-378 (714)
296 COG0075 Serine-pyruvate aminot 98.5 2.3E-06 5E-11 82.3 14.9 107 148-262 62-170 (383)
297 PLN02414 glycine dehydrogenase 98.5 4.5E-06 9.7E-11 89.4 18.4 173 110-308 554-746 (993)
298 PRK15399 lysine decarboxylase 98.5 5.4E-06 1.2E-10 85.6 17.8 191 116-326 193-395 (713)
299 COG0160 GabT 4-aminobutyrate a 98.5 2.8E-05 6.1E-10 76.3 21.6 253 71-347 54-334 (447)
300 PLN02271 serine hydroxymethylt 98.5 8.7E-06 1.9E-10 81.6 18.1 204 73-308 148-372 (586)
301 PF00464 SHMT: Serine hydroxym 98.5 3.8E-06 8.2E-11 81.5 15.1 206 73-312 20-245 (399)
302 PRK05965 hypothetical protein; 98.5 5.8E-05 1.2E-09 75.4 23.9 160 140-312 107-299 (459)
303 COG4992 ArgD Ornithine/acetylo 98.5 2.9E-05 6.2E-10 74.5 20.5 240 71-347 40-297 (404)
304 PRK07482 hypothetical protein; 98.5 5.8E-05 1.3E-09 75.4 23.5 223 71-312 48-304 (461)
305 COG0001 HemL Glutamate-1-semia 98.4 1.9E-05 4E-10 76.5 18.5 218 72-325 52-290 (432)
306 PRK13360 omega amino acid--pyr 98.4 4.5E-05 9.8E-10 75.7 21.5 160 140-312 106-299 (442)
307 PRK06082 4-aminobutyrate amino 98.4 0.0001 2.3E-09 73.5 24.1 159 141-312 131-312 (459)
308 PRK06062 hypothetical protein; 98.4 7.5E-05 1.6E-09 74.4 23.0 161 140-312 112-298 (451)
309 PRK07986 adenosylmethionine--8 98.4 2.5E-05 5.4E-10 77.2 19.5 159 140-308 103-287 (428)
310 PF00282 Pyridoxal_deC: Pyrido 98.4 7.6E-06 1.6E-10 79.4 15.2 206 91-317 51-281 (373)
311 PTZ00094 serine hydroxymethylt 98.4 9.5E-06 2.1E-10 80.8 16.3 213 60-308 22-256 (452)
312 PRK06943 adenosylmethionine--8 98.4 9.2E-05 2E-09 73.8 22.8 159 141-312 115-306 (453)
313 PRK06173 adenosylmethionine--8 98.4 8.6E-05 1.9E-09 73.5 22.2 158 140-308 104-289 (429)
314 PRK07030 adenosylmethionine--8 98.4 0.00017 3.6E-09 72.2 23.9 160 140-312 107-299 (466)
315 PRK07678 aminotransferase; Val 98.4 0.00018 3.9E-09 71.6 24.0 159 141-312 106-297 (451)
316 PRK06209 glutamate-1-semialdeh 98.4 6.9E-05 1.5E-09 74.2 20.9 148 141-312 105-265 (431)
317 PRK07046 aminotransferase; Val 98.4 0.00015 3.3E-09 72.2 23.3 148 140-308 130-297 (453)
318 PRK06916 adenosylmethionine--8 98.4 0.0001 2.2E-09 73.6 22.1 160 141-312 117-308 (460)
319 PRK12403 putative aminotransfe 98.3 0.00017 3.7E-09 72.0 23.6 160 141-312 116-306 (460)
320 COG4100 Cystathionine beta-lya 98.3 1.6E-05 3.4E-10 72.8 14.5 155 117-298 65-236 (416)
321 PRK13578 ornithine decarboxyla 98.3 1.4E-05 3.1E-10 82.7 16.1 177 115-308 171-366 (720)
322 PLN02590 probable tyrosine dec 98.3 7.5E-05 1.6E-09 75.6 20.6 207 92-316 143-373 (539)
323 TIGR00461 gcvP glycine dehydro 98.3 4.4E-05 9.6E-10 81.1 19.0 206 74-308 486-708 (939)
324 COG1982 LdcC Arginine/lysine/o 98.3 1.5E-05 3.2E-10 79.6 14.5 190 116-328 68-264 (557)
325 PLN02760 4-aminobutyrate:pyruv 98.3 0.00024 5.2E-09 71.7 23.5 230 71-324 87-351 (504)
326 TIGR00508 bioA adenosylmethion 98.3 0.00019 4.1E-09 71.0 22.3 156 141-308 106-290 (427)
327 PRK09221 beta alanine--pyruvat 98.3 0.00019 4.1E-09 71.4 22.2 160 140-312 109-302 (445)
328 PRK06917 hypothetical protein; 98.3 0.00041 8.9E-09 69.0 24.6 159 141-312 92-284 (447)
329 PLN02880 tyrosine decarboxylas 98.3 0.00011 2.4E-09 73.9 20.5 206 93-315 96-324 (490)
330 KOG1368 Threonine aldolase [Am 98.3 4.4E-05 9.5E-10 70.0 15.7 194 93-316 35-241 (384)
331 PRK06931 diaminobutyrate--2-ox 98.3 0.00039 8.4E-09 69.4 24.0 151 148-308 127-306 (459)
332 PRK06938 diaminobutyrate--2-ox 98.2 0.00035 7.5E-09 69.9 23.0 159 142-312 128-314 (464)
333 PRK07483 hypothetical protein; 98.2 0.00042 9E-09 68.9 23.2 161 140-312 90-284 (443)
334 PRK05630 adenosylmethionine--8 98.2 0.00015 3.2E-09 71.7 19.8 156 140-312 100-285 (422)
335 cd00611 PSAT_like Phosphoserin 98.2 5.3E-05 1.1E-09 73.0 16.3 154 119-308 46-204 (355)
336 TIGR03799 NOD_PanD_pyr putativ 98.2 4.8E-05 1E-09 76.9 16.5 135 169-316 210-351 (522)
337 PRK08742 adenosylmethionine--8 98.2 0.00052 1.1E-08 68.7 23.7 160 141-312 130-321 (472)
338 PRK07481 hypothetical protein; 98.2 0.00048 1E-08 68.6 23.4 161 140-312 104-297 (449)
339 PF00202 Aminotran_3: Aminotra 98.2 5.9E-05 1.3E-09 72.3 16.2 242 72-347 15-290 (339)
340 PRK07036 hypothetical protein; 98.2 0.00056 1.2E-08 68.4 23.7 177 121-312 95-305 (466)
341 TIGR01364 serC_1 phosphoserine 98.2 0.00018 3.8E-09 69.3 19.1 180 92-308 4-196 (349)
342 COG0112 GlyA Glycine/serine hy 98.2 9.2E-05 2E-09 70.4 16.4 231 59-331 13-257 (413)
343 PRK07480 putative aminotransfe 98.2 0.00078 1.7E-08 67.2 23.8 160 140-312 111-303 (456)
344 COG1103 Archaea-specific pyrid 98.2 5.6E-05 1.2E-09 68.4 13.7 175 119-322 63-241 (382)
345 PRK06105 aminotransferase; Pro 98.2 0.00075 1.6E-08 67.4 23.3 223 71-312 46-302 (460)
346 PRK05367 glycine dehydrogenase 98.2 6.2E-05 1.3E-09 80.9 16.4 176 111-308 529-720 (954)
347 PRK06149 hypothetical protein; 98.1 0.00057 1.2E-08 74.3 23.5 191 140-347 641-859 (972)
348 PLN02724 Molybdenum cofactor s 98.1 0.00018 3.9E-09 76.7 18.6 209 75-308 35-274 (805)
349 PRK06148 hypothetical protein; 98.1 0.00075 1.6E-08 73.6 23.1 160 141-312 681-868 (1013)
350 TIGR02617 tnaA_trp_ase tryptop 98.0 0.00022 4.8E-09 69.7 16.0 205 74-315 42-281 (467)
351 PRK12566 glycine dehydrogenase 98.0 0.00021 4.6E-09 75.7 17.0 166 111-298 530-707 (954)
352 PRK08297 L-lysine aminotransfe 97.9 0.0025 5.4E-08 63.4 22.2 126 140-267 110-273 (443)
353 PRK05367 glycine dehydrogenase 97.9 0.00024 5.2E-09 76.5 15.8 150 75-260 78-242 (954)
354 KOG1359 Glycine C-acetyltransf 97.9 0.0003 6.5E-09 64.5 13.1 219 72-331 66-290 (417)
355 COG1921 SelA Selenocysteine sy 97.8 0.005 1.1E-07 59.3 20.5 233 74-340 21-261 (395)
356 PRK03080 phosphoserine aminotr 97.8 0.00035 7.6E-09 67.9 12.6 152 119-308 50-206 (378)
357 KOG2862 Alanine-glyoxylate ami 97.7 0.00063 1.4E-08 62.9 12.8 113 141-263 69-183 (385)
358 KOG1401 Acetylornithine aminot 97.7 0.014 3.1E-07 55.9 22.2 222 71-312 54-289 (433)
359 PRK05355 3-phosphoserine/phosp 97.7 0.0021 4.5E-08 62.2 17.1 138 141-308 67-207 (360)
360 TIGR03811 tyr_de_CO2_Ent tyros 97.5 0.0072 1.6E-07 62.1 18.8 95 170-266 224-326 (608)
361 PLN02414 glycine dehydrogenase 97.5 0.002 4.3E-08 69.5 15.1 145 76-258 106-268 (993)
362 TIGR03251 LAT_fam L-lysine 6-t 97.4 0.0059 1.3E-07 60.5 16.1 127 140-268 103-267 (431)
363 COG1003 GcvP Glycine cleavage 97.4 0.0038 8.3E-08 60.3 13.8 140 110-262 95-243 (496)
364 PLN02974 adenosylmethionine-8- 97.4 0.038 8.3E-07 58.9 22.6 102 208-324 567-676 (817)
365 KOG1360 5-aminolevulinate synt 97.3 0.012 2.6E-07 56.3 15.1 240 46-322 146-394 (570)
366 KOG1383 Glutamate decarboxylas 97.0 0.004 8.7E-08 60.6 9.6 193 55-267 61-263 (491)
367 KOG1404 Alanine-glyoxylate ami 97.0 0.058 1.3E-06 51.7 16.5 175 119-312 94-295 (442)
368 PF03841 SelA: L-seryl-tRNA se 96.9 0.0029 6.2E-08 60.4 7.4 163 141-326 63-235 (367)
369 TIGR00699 GABAtrns_euk 4-amino 96.9 0.061 1.3E-06 53.8 17.2 126 140-267 122-299 (464)
370 PF05889 SLA_LP_auto_ag: Solub 96.9 0.0064 1.4E-07 58.5 9.3 164 141-317 75-242 (389)
371 TIGR01366 serC_3 phosphoserine 96.6 0.015 3.2E-07 56.3 9.8 145 119-301 43-191 (361)
372 PLN02452 phosphoserine transam 96.4 0.29 6.4E-06 47.4 17.7 137 142-308 72-211 (365)
373 COG0403 GcvP Glycine cleavage 96.4 0.22 4.8E-06 48.4 16.2 153 76-258 78-245 (450)
374 PF02347 GDC-P: Glycine cleava 96.3 0.12 2.6E-06 50.9 14.3 152 74-258 66-231 (429)
375 TIGR00461 gcvP glycine dehydro 96.3 0.17 3.6E-06 54.6 16.3 147 76-259 67-229 (939)
376 PLN02672 methionine S-methyltr 96.2 0.15 3.3E-06 55.7 15.9 213 110-343 419-642 (1082)
377 KOG1357 Serine palmitoyltransf 96.0 0.12 2.6E-06 50.4 12.3 192 119-345 184-390 (519)
378 PRK12462 phosphoserine aminotr 95.8 0.45 9.7E-06 46.1 15.4 189 74-303 4-206 (364)
379 KOG0628 Aromatic-L-amino-acid/ 95.7 0.017 3.8E-07 56.2 5.3 94 170-268 184-280 (511)
380 COG3033 TnaA Tryptophanase [Am 95.5 0.2 4.3E-06 47.7 11.3 141 111-261 73-227 (471)
381 COG3844 Kynureninase [Amino ac 95.4 0.49 1.1E-05 44.6 13.4 108 140-264 93-207 (407)
382 COG0161 BioA Adenosylmethionin 95.2 1.9 4.2E-05 42.7 17.8 160 140-308 105-297 (449)
383 TIGR01365 serC_2 phosphoserine 95.2 0.75 1.6E-05 44.8 14.9 125 147-301 63-191 (374)
384 KOG1358 Serine palmitoyltransf 93.5 1.1 2.5E-05 43.1 11.4 169 71-264 92-274 (467)
385 KOG3843 Predicted serine hydro 92.5 2.2 4.7E-05 39.1 11.3 138 186-338 121-261 (432)
386 PRK12566 glycine dehydrogenase 91.7 4.1 9E-05 44.1 14.1 186 74-308 80-285 (954)
387 KOG2040 Glycine dehydrogenase 91.2 4.3 9.3E-05 41.8 12.8 143 110-262 568-719 (1001)
388 KOG1402 Ornithine aminotransfe 91.1 1.6 3.5E-05 41.2 9.1 125 206-346 195-320 (427)
389 KOG0629 Glutamate decarboxylas 90.4 0.56 1.2E-05 45.6 5.6 116 140-264 160-294 (510)
390 KOG1403 Predicted alanine-glyo 83.7 33 0.00073 32.3 12.8 199 92-308 63-291 (452)
391 KOG2467 Glycine/serine hydroxy 81.1 16 0.00035 35.2 10.0 224 52-310 21-265 (477)
392 cd06568 GH20_SpHex_like A subg 76.7 6.6 0.00014 37.5 6.3 69 183-258 25-93 (329)
393 TIGR00623 sula cell division i 75.6 51 0.0011 28.2 10.7 83 166-255 58-140 (168)
394 cd02742 GH20_hexosaminidase Be 73.8 9.6 0.00021 35.8 6.5 67 184-258 24-90 (303)
395 PRK10595 SOS cell division inh 70.3 68 0.0015 27.4 10.7 83 166-255 54-136 (164)
396 PF14258 DUF4350: Domain of un 70.0 31 0.00068 24.4 7.1 23 237-259 47-70 (70)
397 PF02662 FlpD: Methyl-viologen 69.5 19 0.00042 29.1 6.5 60 189-254 28-91 (124)
398 cd06562 GH20_HexA_HexB-like Be 67.7 12 0.00027 35.9 5.9 64 183-258 25-88 (348)
399 cd06570 GH20_chitobiase-like_1 67.3 13 0.00028 35.2 5.8 61 184-258 26-86 (311)
400 KOG1209 1-Acyl dihydroxyaceton 67.0 41 0.00089 30.2 8.3 88 140-234 7-94 (289)
401 PF05368 NmrA: NmrA-like famil 65.1 51 0.0011 29.1 9.1 90 151-257 8-98 (233)
402 COG1105 FruK Fructose-1-phosph 63.1 1.4E+02 0.003 28.3 11.9 56 203-262 109-168 (310)
403 COG1648 CysG Siroheme synthase 61.6 45 0.00098 29.6 7.8 88 140-256 12-100 (210)
404 PF04002 RadC: RadC-like JAB d 61.4 22 0.00048 28.6 5.4 61 204-267 50-119 (123)
405 cd06563 GH20_chitobiase-like T 59.5 25 0.00054 33.9 6.3 74 185-258 27-104 (357)
406 cd00952 CHBPH_aldolase Trans-o 59.5 89 0.0019 29.4 10.0 84 149-260 87-171 (309)
407 cd06569 GH20_Sm-chitobiase-lik 59.5 27 0.00059 34.8 6.7 74 185-258 31-115 (445)
408 KOG2741 Dimeric dihydrodiol de 59.1 42 0.00091 32.1 7.5 76 177-266 60-135 (351)
409 PLN02970 serine racemase 59.1 1E+02 0.0023 29.2 10.5 79 113-197 50-129 (328)
410 COG1932 SerC Phosphoserine ami 58.7 1E+02 0.0023 29.7 10.0 229 73-346 4-255 (365)
411 PF10087 DUF2325: Uncharacteri 58.6 79 0.0017 24.0 8.7 71 176-258 10-80 (97)
412 PRK07476 eutB threonine dehydr 57.5 1E+02 0.0022 29.1 10.1 52 143-197 70-121 (322)
413 COG0157 NadC Nicotinate-nucleo 57.4 70 0.0015 29.7 8.4 123 142-297 126-268 (280)
414 PF00728 Glyco_hydro_20: Glyco 57.4 8.5 0.00018 36.7 2.7 66 184-258 26-91 (351)
415 TIGR00683 nanA N-acetylneurami 57.2 97 0.0021 28.8 9.7 94 123-247 56-154 (290)
416 PRK08246 threonine dehydratase 56.5 1.3E+02 0.0027 28.4 10.4 75 115-196 47-121 (310)
417 TIGR03815 CpaE_hom_Actino heli 56.5 1.8E+02 0.0038 27.4 13.0 153 93-261 54-213 (322)
418 KOG2865 NADH:ubiquinone oxidor 55.3 77 0.0017 29.9 8.2 103 140-254 60-169 (391)
419 PRK05638 threonine synthase; V 54.0 1.2E+02 0.0026 30.1 10.4 78 113-196 88-165 (442)
420 COG2515 Acd 1-aminocyclopropan 53.7 1E+02 0.0022 29.1 8.8 105 142-251 65-177 (323)
421 PRK08638 threonine dehydratase 52.5 1.3E+02 0.0028 28.6 9.9 77 115-196 52-128 (333)
422 cd07476 Peptidases_S8_thiazoli 52.0 51 0.0011 30.3 6.8 69 189-258 74-143 (267)
423 PRK08265 short chain dehydroge 50.4 1.7E+02 0.0036 26.2 10.0 94 148-247 11-108 (261)
424 TIGR00674 dapA dihydrodipicoli 49.7 1.2E+02 0.0027 27.9 9.2 34 219-259 124-159 (285)
425 TIGR01470 cysG_Nterm siroheme 49.7 1.7E+02 0.0037 25.7 9.6 93 140-260 9-102 (205)
426 cd01563 Thr-synth_1 Threonine 48.4 1.9E+02 0.0042 27.1 10.4 54 141-197 71-124 (324)
427 cd01562 Thr-dehyd Threonine de 48.1 2E+02 0.0044 26.5 10.4 54 141-197 66-119 (304)
428 PF04412 DUF521: Protein of un 47.7 48 0.001 32.6 6.1 28 220-253 289-316 (400)
429 PRK13352 thiamine biosynthesis 46.7 2.2E+02 0.0048 28.1 10.3 154 73-260 60-226 (431)
430 TIGR00649 MG423 conserved hypo 46.0 3E+02 0.0065 27.0 12.4 74 167-254 318-401 (422)
431 PRK06815 hypothetical protein; 45.6 2.2E+02 0.0048 26.7 10.3 80 113-197 43-122 (317)
432 TIGR02884 spore_pdaA delta-lac 44.2 1.8E+02 0.0038 25.9 8.9 69 182-257 145-218 (224)
433 PRK05678 succinyl-CoA syntheta 43.2 2.6E+02 0.0056 26.2 10.1 49 207-264 79-127 (291)
434 PRK08329 threonine synthase; V 43.2 2E+02 0.0044 27.4 9.7 54 141-197 105-158 (347)
435 COG0031 CysK Cysteine synthase 43.1 1.4E+02 0.0029 28.2 8.1 56 138-197 59-116 (300)
436 KOG1201 Hydroxysteroid 17-beta 43.1 2.9E+02 0.0063 26.0 12.0 101 140-248 38-144 (300)
437 smart00642 Aamy Alpha-amylase 42.2 32 0.00069 29.2 3.6 28 238-265 68-95 (166)
438 PRK06721 threonine synthase; R 42.0 2.7E+02 0.0058 26.7 10.3 75 116-196 54-129 (352)
439 cd06449 ACCD Aminocyclopropane 40.7 1.9E+02 0.0041 27.0 9.0 17 181-197 100-116 (307)
440 COG2102 Predicted ATPases of P 39.9 1.6E+02 0.0035 26.4 7.7 71 181-257 104-177 (223)
441 COG0296 GlgB 1,4-alpha-glucan 39.6 47 0.001 34.6 4.9 37 229-268 206-242 (628)
442 cd06564 GH20_DspB_LnbB-like Gl 39.5 33 0.00071 32.6 3.6 26 232-257 74-99 (326)
443 PRK06500 short chain dehydroge 39.1 2.6E+02 0.0057 24.4 9.4 48 148-197 11-59 (249)
444 PRK11864 2-ketoisovalerate fer 38.9 2.7E+02 0.0058 26.3 9.4 72 181-259 163-236 (300)
445 PF08672 APC2: Anaphase promot 38.7 30 0.00064 24.2 2.3 34 229-262 25-58 (60)
446 TIGR01244 conserved hypothetic 38.5 28 0.00061 28.4 2.6 65 184-253 52-125 (135)
447 PRK11865 pyruvate ferredoxin o 38.5 3.1E+02 0.0067 25.8 9.8 71 182-259 168-240 (299)
448 cd06448 L-Ser-dehyd Serine deh 38.3 3.4E+02 0.0075 25.5 11.3 53 141-197 52-105 (316)
449 TIGR01127 ilvA_1Cterm threonin 38.3 2.6E+02 0.0057 26.9 9.8 79 113-196 23-101 (380)
450 PRK08198 threonine dehydratase 37.1 2.1E+02 0.0045 27.9 8.9 80 112-196 44-123 (404)
451 TIGR02873 spore_ylxY probable 36.9 2.3E+02 0.0051 26.1 8.7 67 183-257 193-261 (268)
452 PF00128 Alpha-amylase: Alpha 36.9 29 0.00063 31.7 2.7 30 238-267 50-79 (316)
453 TIGR02026 BchE magnesium-proto 36.7 2E+02 0.0044 29.0 9.0 63 185-258 32-97 (497)
454 PLN02417 dihydrodipicolinate s 36.6 3E+02 0.0064 25.4 9.4 34 223-260 128-161 (280)
455 PF04019 DUF359: Protein of un 36.1 2.3E+02 0.005 22.8 7.9 59 230-305 40-99 (121)
456 cd01422 MGS Methylglyoxal synt 35.5 1.9E+02 0.0041 22.8 6.9 70 181-258 36-106 (115)
457 cd01561 CBS_like CBS_like: Thi 35.5 2.6E+02 0.0056 25.8 9.0 54 141-197 54-107 (291)
458 COG0065 LeuC 3-isopropylmalate 35.1 81 0.0018 30.8 5.4 71 223-298 59-129 (423)
459 TIGR02104 pulA_typeI pullulana 34.8 40 0.00087 35.0 3.6 36 228-266 220-255 (605)
460 PF04273 DUF442: Putative phos 34.6 39 0.00084 26.7 2.7 60 166-228 25-94 (110)
461 PRK06381 threonine synthase; V 33.5 3.3E+02 0.0072 25.4 9.5 76 116-197 42-117 (319)
462 cd00640 Trp-synth-beta_II Tryp 33.4 2.2E+02 0.0048 25.3 7.9 49 148-197 56-104 (244)
463 TIGR00190 thiC thiamine biosyn 33.2 3.9E+02 0.0084 26.3 9.6 151 73-260 60-223 (423)
464 TIGR01275 ACC_deam_rel pyridox 33.1 2.3E+02 0.0049 26.4 8.2 28 169-196 84-112 (311)
465 PRK07048 serine/threonine dehy 32.8 4E+02 0.0086 25.0 9.8 54 141-197 73-126 (321)
466 COG1679 Predicted aconitase [G 32.7 81 0.0018 30.6 4.9 34 214-253 283-316 (403)
467 PRK11579 putative oxidoreducta 32.5 4.1E+02 0.0088 25.1 10.0 71 176-259 51-121 (346)
468 PLN02556 cysteine synthase/L-3 31.9 3.5E+02 0.0076 26.2 9.4 80 148-234 117-197 (368)
469 PF13872 AAA_34: P-loop contai 31.7 34 0.00074 32.2 2.3 66 239-305 158-234 (303)
470 PF14097 SpoVAE: Stage V sporu 31.3 2.7E+02 0.0059 23.9 7.3 77 225-308 28-107 (180)
471 PF01408 GFO_IDH_MocA: Oxidore 31.1 1.2E+02 0.0026 23.4 5.1 19 238-256 98-116 (120)
472 COG4821 Uncharacterized protei 30.8 1.5E+02 0.0033 26.3 5.9 41 211-259 97-137 (243)
473 TIGR03573 WbuX N-acetyl sugar 30.4 4.9E+02 0.011 24.8 12.4 126 118-266 41-178 (343)
474 PF02310 B12-binding: B12 bind 29.9 2.6E+02 0.0056 21.5 8.4 63 183-258 22-86 (121)
475 cd04728 ThiG Thiazole synthase 29.8 4.2E+02 0.0091 24.3 8.8 76 169-252 10-88 (248)
476 PRK08197 threonine synthase; V 29.6 4.4E+02 0.0096 25.6 9.8 54 141-197 128-181 (394)
477 PF13684 Dak1_2: Dihydroxyacet 29.5 2.9E+02 0.0063 26.1 8.2 68 180-257 107-174 (313)
478 PLN02565 cysteine synthase 29.5 4.4E+02 0.0096 24.9 9.5 81 112-196 37-120 (322)
479 PRK07334 threonine dehydratase 29.5 2.2E+02 0.0048 27.8 7.7 76 115-196 48-124 (403)
480 TIGR02012 tigrfam_recA protein 29.3 5E+02 0.011 24.7 10.9 138 116-263 37-193 (321)
481 COG1204 Superfamily II helicas 29.3 2.9E+02 0.0064 29.7 9.0 58 140-197 47-111 (766)
482 PRK14045 1-aminocyclopropane-1 29.2 3.1E+02 0.0066 26.0 8.4 15 183-197 113-127 (329)
483 TIGR02764 spore_ybaN_pdaB poly 28.8 3.4E+02 0.0073 23.1 8.0 71 182-257 113-185 (191)
484 cd00377 ICL_PEPM Members of th 28.7 2.4E+02 0.0051 25.6 7.2 95 165-262 5-108 (243)
485 PF04413 Glycos_transf_N: 3-De 28.5 3.8E+02 0.0083 23.0 9.4 98 142-258 22-123 (186)
486 PRK09354 recA recombinase A; P 28.5 5.4E+02 0.012 24.8 10.8 138 116-263 42-198 (349)
487 KOG1405 4-aminobutyrate aminot 28.2 1.8E+02 0.0038 28.3 6.3 89 207-301 255-348 (484)
488 PRK06483 dihydromonapterin red 28.2 4E+02 0.0086 23.1 10.0 91 148-247 7-103 (236)
489 cd00954 NAL N-Acetylneuraminic 28.2 2.3E+02 0.005 26.2 7.3 61 181-247 88-154 (288)
490 cd06565 GH20_GcnA-like Glycosy 28.2 60 0.0013 30.5 3.3 25 234-258 54-78 (301)
491 PRK06382 threonine dehydratase 28.0 3.3E+02 0.0072 26.6 8.6 77 115-196 50-126 (406)
492 PRK11761 cysM cysteine synthas 27.9 4.3E+02 0.0094 24.5 9.1 53 141-197 64-117 (296)
493 PRK00208 thiG thiazole synthas 27.5 4.7E+02 0.01 24.0 8.7 74 169-251 11-87 (250)
494 COG2062 SixA Phosphohistidine 27.4 1.8E+02 0.0039 24.8 5.7 28 203-233 83-112 (163)
495 PF00117 GATase: Glutamine ami 27.3 3.2E+02 0.0069 23.1 7.6 63 182-257 14-76 (192)
496 TIGR02079 THD1 threonine dehyd 26.8 5.7E+02 0.012 25.1 10.0 77 116-197 42-118 (409)
497 COG0505 CarA Carbamoylphosphat 26.8 1.6E+02 0.0035 28.4 5.8 60 167-237 178-238 (368)
498 TIGR01137 cysta_beta cystathio 26.8 4.4E+02 0.0095 26.0 9.4 78 117-197 38-116 (454)
499 PF03460 NIR_SIR_ferr: Nitrite 26.4 25 0.00055 24.8 0.4 24 230-254 15-38 (69)
500 cd07484 Peptidases_S8_Thermita 26.4 1.8E+02 0.0038 26.2 6.0 64 189-258 94-158 (260)
No 1
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-67 Score=475.14 Aligned_cols=304 Identities=72% Similarity=1.162 Sum_probs=297.1
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
.|.|++|+.+|||||++++++|++|+++.+|||++|.|||++|+|+++++|++|++++.. ...+.+|.|+.|+++|.+.
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-~~ldKEYlpI~Gl~eF~k~ 103 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLAS-LSLDKEYLPITGLAEFNKL 103 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhh-hcccchhccccchHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999884 5678899999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
.+++.+|.+++.+++++|+.+||.+||+|+++++.|++.+.++..|++|+|+|.||..+++.+|+.++.|.||++.+.++
T Consensus 104 sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gl 183 (427)
T KOG1411|consen 104 SAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGL 183 (427)
T ss_pred HHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++++.+.+.+++.+..+++|.|+|||||++++.|+|++|.++.++++++.++|.+|++|.+|++++|+.++|.|.+++.
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
++++++||+|++|++|+|+|.+.+||.+.++..++.+|++.++|++||+||.++++|++.||+||
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~ 328 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDP 328 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 2
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-66 Score=476.65 Aligned_cols=301 Identities=54% Similarity=0.989 Sum_probs=291.1
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+|++|+..|+|||+++.+.|++|++++||||++|.|+|++|+++++++|++|++.+.++ ...+.|.|+.|+++++++++
T Consensus 1 ~F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~-~~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 1 MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ-EKTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred CccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc-ccccccCCcCCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999844 36788999999999999999
Q ss_pred HHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCH
Q 018820 128 KLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 128 ~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
+++||.+++.+.+++|..+||.|||+||++++.|++...+..+|++++|+|+||..+|..+|+++.+|||||.++.++|+
T Consensus 80 ~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 80 KLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred HHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccH
Confidence 99999998888899999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+.+.+++.+++.++++|+|+|||||.++|.+||++|+++.+++++++++|.||++|..| +++|++.+|.|+..+..+
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~ 238 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcE
Confidence 9999999999999999999999999999999999999999999999999999999999987 889999999999888889
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
++++||||+|||||+|||++.+++.|.+.+.++.+|++.++|.+|||||.+|+++++.+|+||
T Consensus 239 lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p 301 (396)
T COG1448 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNP 301 (396)
T ss_pred EEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCH
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 3
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-62 Score=438.35 Aligned_cols=306 Identities=52% Similarity=0.924 Sum_probs=297.0
Q ss_pred ccccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 018820 45 NDSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNK 124 (350)
Q Consensus 45 ~~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ 124 (350)
++++|..++.+|++.+|.+.+.|++|..|.++||++|+||+++|+||++|+|++++..+.++...+|+|.|+.|++.|++
T Consensus 2 ~~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~ 81 (410)
T KOG1412|consen 2 SMSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTK 81 (410)
T ss_pred CcchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhh
Confidence 36899999999999999999999999999999999999999999999999999999999877888999999999999999
Q ss_pred HHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcC-CeEEEEEeecCCCC
Q 018820 125 LSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAG-LSVKSYRYYDPATR 203 (350)
Q Consensus 125 aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G-~~~~~v~~~~~~~~ 203 (350)
+.++.++|.++++++++++..||+.|||+|+++++.|++.+.+..+|++++|+|++|..+++.+| .++..|++|+.++.
T Consensus 82 ~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k 161 (410)
T KOG1412|consen 82 AATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENK 161 (410)
T ss_pred hhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCc
Confidence 99999999999999999999999999999999999999998888999999999999999999999 57899999999999
Q ss_pred CCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc
Q 018820 204 GLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD 283 (350)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~ 283 (350)
++|++.+...++.+|.+++++++.|.|||||.++|+|||.+|++..++++++.++|-+|++|++||++.|+|++|.|.++
T Consensus 162 ~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~ 241 (410)
T KOG1412|consen 162 CVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ 241 (410)
T ss_pred eecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
+.++++++||+|+||+++.|+|.+.+|..++.....+.+||..++|..||+||.+|++|++.+|++|
T Consensus 242 g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP 308 (410)
T KOG1412|consen 242 GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTP 308 (410)
T ss_pred CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 4
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.1e-49 Score=387.43 Aligned_cols=303 Identities=77% Similarity=1.208 Sum_probs=252.7
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
.++|+++...++++|+.+.+.++++..+.+|+|+.|.+.+++++|+..+.++++...+. ......+|+|..|.++||++
T Consensus 21 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~-~~~~~~~Y~~~~G~~~LR~a 99 (423)
T PLN02397 21 SSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLL-AGSRNKEYLPIEGLAEFNKL 99 (423)
T ss_pred hhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhh-ccCCCCCCCCcCCCHHHHHH
Confidence 46799999999999999999888888889999999975477777777889999887774 23445679999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+++|+++.......+++|..+++.+++++..++..++..+.|||+|++++|+|++|..+++.+|++++.||+.+++++++
T Consensus 100 ia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~ 179 (423)
T PLN02397 100 SAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGL 179 (423)
T ss_pred HHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCcc
Confidence 99998776554444566765667777778766656676677999999999999999999999999999999855556899
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++.+++.++..+++.+++++++||||||.+++.++|++|+++|++||++||+||+|.+|.+++..++..++..+...++
T Consensus 180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 259 (423)
T PLN02397 180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGH 259 (423)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCC
Confidence 99999988875444567999999999999999999999999999999999999999999998641112344445544456
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+++||||+|+++|||+||+++++++++.+.++.+++..+.+..+++++.+.|.++..+|++
T Consensus 260 ~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~ 323 (423)
T PLN02397 260 EILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGD 323 (423)
T ss_pred cEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence 8999999999999999999999765777777777888888888888888999999999998876
No 5
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-49 Score=383.24 Aligned_cols=302 Identities=58% Similarity=1.006 Sum_probs=247.7
Q ss_pred ccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 018820 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLS 126 (350)
Q Consensus 47 ~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ai 126 (350)
++|.++...++++|+.+.+.++++..+++|||++|.|.+++++..+.+.++++...+.. .....+|+|..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~Y~~~~G~~~lR~ai 81 (404)
T PTZ00376 3 SLFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE-KNLDKEYLPIEGLQSFIEAA 81 (404)
T ss_pred hhhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhcc-ccCCCCCCCCCCCHHHHHHH
Confidence 56888888888888888887776556789999999975566666778888888777652 23346799999999999999
Q ss_pred HHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHH-HHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 127 AKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFL-ARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 127 a~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
++|+++.....+.+++|++.+|.|+++|+.++..++ +++.+||+|++++|+|+.|..+++.+|++++.||+.+++++++
T Consensus 82 a~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~ 161 (404)
T PTZ00376 82 QKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGL 161 (404)
T ss_pred HHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCc
Confidence 999877654445688998666999999998764433 4567999999999999999999999999999999955556899
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++.+++.+++..++..++++||||||||.+++.++|++|+++|++|+++||+||+|.+|.+++.+.+..++..+....+
T Consensus 162 d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 241 (404)
T PTZ00376 162 DFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGV 241 (404)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCC
Confidence 99999999875433456888999999999999999999999999999999999999999998632112234444444445
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+++||||.|+++|||+||++++..+++..+++++++.+..+..+++++.++|.++..+|++
T Consensus 242 ~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 305 (404)
T PTZ00376 242 EFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSD 305 (404)
T ss_pred cEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCC
Confidence 8999999999999999999998754567777777888888777778888899999999999875
No 6
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.5e-48 Score=377.23 Aligned_cols=300 Identities=53% Similarity=0.944 Sum_probs=242.9
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+|.++...+++++..+...++++..+++|||++|.|.+++++++..+.++++...+..+ ....+|++..|.++||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-~~~~~Y~~~~G~~~lR~aia 79 (396)
T PRK09257 1 MFEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-ETTKNYLPIEGLAAYRQAVQ 79 (396)
T ss_pred CcccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhccc-ccCCCcCCCCCCHHHHHHHH
Confidence 37788888888888877777765567899999998744444343357788887776522 23457999999999999999
Q ss_pred HHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCH
Q 018820 128 KLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 128 ~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
+|+.+.....+.+++|.++.|+|+++|+.+++.++..+.+||+|++++|+|+.|..+++..|++++.+|+.+++++++|+
T Consensus 80 ~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 80 ELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred HHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 99877655444588872233999999999876555556899999999999999999999999999999985555689999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++.++....+.++++++|||||||.+++.+++++|+++|++||++||+||+|.+|.++. +.+..++..+....+++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcCCcE
Confidence 99999887544445788889999999999999999999999999999999999999998641 12334444454445689
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+++||||+|+++|||+||+++++++++.+.+++++++...+..+++++.+.|.+++.+|++
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 300 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILND 300 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCC
Confidence 99999999999999999999854566666677888887877778888999999999999875
No 7
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-46 Score=363.82 Aligned_cols=256 Identities=16% Similarity=0.217 Sum_probs=211.0
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCc-EEEEecCCc
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENR-VTTVQCLSG 151 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~-v~~~~t~G~ 151 (350)
.++|+|++|+| |...| .++++.+.+.+. .... .|.|.+|+++||+++++++.......+.+++ |++ |+|+
T Consensus 28 ~~vi~l~iG~P-d~~~p---~~i~~a~~~a~~--~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga 98 (393)
T COG0436 28 EDVIDLSIGEP-DFPTP---EHIIEAAIEALE--EGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGA 98 (393)
T ss_pred CCEEEeCCCCC-CCCCC---HHHHHHHHHHHh--cccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCH
Confidence 57999999999 65443 555555555555 2222 5889999999999999995433221233444 999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
++|+.+ .+++++.|||+|++++|.|+.|..+.+.+|++++.+++..+ ++|.+|++.+++.+.++++ ++++|+||
T Consensus 99 ~~al~~--~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk---~i~ln~P~ 173 (393)
T COG0436 99 KEALFL--AFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTK---AIILNSPN 173 (393)
T ss_pred HHHHHH--HHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccce---EEEEeCCC
Confidence 999998 56778999999999999999999999999999999998433 4799999999999987555 89999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++++++++|+++|++||++||+||+|.+|.|++ ....++..+....+++|+++||||+|+|+|||+||++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~--~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v-- 249 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDG--AEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV-- 249 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCC--CCcCCHhhcCCCcceEEEEecccccccccccceeEee--
Confidence 999999999999999999999999999999999999985 2223444443334689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
+++ ..+++.+.+++....+|++.++|.++..+|+.+
T Consensus 250 ~~~----~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 250 GPP----EELIAALRKLKSYLTSCAPTPAQYAAIAALNGP 285 (393)
T ss_pred cCh----HHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCc
Confidence 775 356666667888888999999999999999863
No 8
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.2e-41 Score=330.27 Aligned_cols=266 Identities=15% Similarity=0.129 Sum_probs=204.7
Q ss_pred CCCCeEEeecccccCCC------C---------------C-----ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 018820 71 PSPVKLNLGVGAYRTEE------G---------------K-----PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNK 124 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~------~---------------~-----p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ 124 (350)
.+.++|+|++|+| |.. . . ..+.+.++++...+.........|++..|.++||+
T Consensus 36 ~g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~ 114 (407)
T PLN02368 36 EGKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRK 114 (407)
T ss_pred HhhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Confidence 4678999999999 421 0 0 12467778887765422223467999999999999
Q ss_pred HHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCC
Q 018820 125 LSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATR 203 (350)
Q Consensus 125 aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 203 (350)
++++|+.......+.+++|++ |+|+++++.++ +.+++ .+||.|++++|+|+.|..+++..|++++++++..+++|
T Consensus 115 aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~ 190 (407)
T PLN02368 115 EVAEFIERRDGYPSDPELIFL--TDGASKGVMQI--LNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENW 190 (407)
T ss_pred HHHHHHHHhcCCCCChhhEEE--cccHHHHHHHH--HHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCC
Confidence 999996433222345889999 99999999884 44455 69999999999999999999999999999998444568
Q ss_pred CCCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 204 GLNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 204 ~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
++|++.+++.++.. ..+..+++++|||||||.+++.+++++|+++|++||++||+||+|.+|.|++. ....+...+
T Consensus 191 ~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~-~~~~s~~~~ 269 (407)
T PLN02368 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE-RPFISAKKV 269 (407)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCcccHHHH
Confidence 99999999988641 11345788999999999999999999999999999999999999999998641 111233332
Q ss_pred h-h------cCCcEEEEecccccc-CccCcceeEEEEee--CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 V-A------DGGECFIAQSYAKNL-GLYGERVGALSIVC--KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 ~-~------~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
. . ...++|+++||||.| +++|||+||++ + .+ +.+++++.+.... ..+++.++|.++..+|++
T Consensus 270 ~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i--~~~~~----~~li~~~~~~~~~-~~~~~~~~Q~aa~~~l~~ 341 (407)
T PLN02368 270 LMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFE--MTNIP----PKTVEEIYKVASI-ALSPNVSGQIFMGLMVNP 341 (407)
T ss_pred HhhhcccccccceEEEEecCCcccccCCccceEEEE--EeCCC----HHHHHHHHHHhcc-cCCCCcHHHHHHHHHhCC
Confidence 1 1 134899999999998 89999999988 5 33 3455556565433 446899999999999874
No 9
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=326.75 Aligned_cols=275 Identities=15% Similarity=0.202 Sum_probs=207.0
Q ss_pred cccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCcc
Q 018820 60 ILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIR 139 (350)
Q Consensus 60 i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~ 139 (350)
+..+.+.+.++.++++|+|++|.| ++.+...+.+.+.++....... .....|+|..|.++||+++++|+.......+.
T Consensus 19 ~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~ 96 (409)
T PLN00143 19 VKFLKENFNEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRS-AKFNSYAPTGGILPARRAIADYLSNDLPYQLS 96 (409)
T ss_pred HHHHHHhcccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhC-cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Confidence 333444566778899999999999 5211112344555554443312 22356999999999999999997543222355
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
+++|++ |+|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.++.++
T Consensus 97 ~~~I~i--t~G~~~al~~~--~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~- 171 (409)
T PLN00143 97 PDDVYL--TLGCKHAAEII--IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENT- 171 (409)
T ss_pred HhhEEE--ecChHHHHHHH--HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCC-
Confidence 899999 99999999984 4556789999999999999999999999999999998434568899999988775433
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
.+++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ....++..+ ....++|+++||||.|++
T Consensus 172 --~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~~~~~~~-~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 172 --IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS--KPFVPMGLF-ASIVPVITLGSISKRWMI 246 (409)
T ss_pred --EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC--CCCcchhhh-cccCcEEEEccchhhcCC
Confidence 377788999999999999999999999999999999999999999864 221233333 233589999999999999
Q ss_pred cCcceeEEEEeeCChh-HHH--HHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 300 YGERVGALSIVCKTAD-VAG--RVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 300 ~G~RvG~l~~v~~~~~-~~~--~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||||+||++ +++++ ..+ .+..++.+.... ...++.+.|.++..+|++
T Consensus 247 pGlRvG~~v--~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 296 (409)
T PLN00143 247 PGWGLGWLV--TCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEK 296 (409)
T ss_pred CccceEEEE--eeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhc
Confidence 999999988 75443 221 234444444332 334578899999988864
No 10
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=326.76 Aligned_cols=274 Identities=19% Similarity=0.177 Sum_probs=213.6
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+-.++...+.+.+..+.+... .++.|+|++|.| +.. +.+.++++..+...+ ....|++..|.++||++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P-~~~----~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~Lr~aia 101 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLAI---KHGAINLGQGFP-NFD----GPDFVKEAAIQAIRD--GKNQYARGFGVPELNSAIA 101 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHhh---cCCeEecCCCCC-CCC----CCHHHHHHHHHHHhc--CCCCcCCCCCCHHHHHHHH
Confidence 345566666655434444333 357999999999 432 245566666555422 2367999999999999999
Q ss_pred HHHhCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCC
Q 018820 128 KLILGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 128 ~~~~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
+++.......+.++ +|++ |+|+++++.+ .+.+++.+||.|++++|+|+.|...++..|++++.|++ +++++.+|
T Consensus 102 ~~~~~~~g~~~~~~~~I~v--t~G~~~al~~--~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~ 176 (413)
T PLN00175 102 ERFKKDTGLVVDPEKEVTV--TSGCTEAIAA--TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTL-RPPDFAVP 176 (413)
T ss_pred HHHHHHhCCCCCCCCCEEE--eCCHHHHHHH--HHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEEC-CcccCCCC
Confidence 99642211123355 7998 9999999988 44566889999999999999999999999999999998 55558899
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~ 286 (350)
++.+++.+..++ .++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ +..++..+....++
T Consensus 177 ~~~l~~~~~~~~---k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~ 250 (413)
T PLN00175 177 EDELKAAFTSKT---RAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYER 250 (413)
T ss_pred HHHHHHhcCcCc---eEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCc
Confidence 999999886543 377889999999999999999999999999999999999999998863 22233333333468
Q ss_pred EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 287 vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+++||||.|+++|||+||++ ++ ++++..+.........+++.+.|.++..+|++
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v--~~-----~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~ 306 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAI--AP-----PHLTWGVRQAHSFLTFATATPMQWAAVAALRA 306 (413)
T ss_pred EEEEecchhhccCcchheeeeE--eC-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999988 77 56777777776666678899999999999865
No 11
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-41 Score=315.41 Aligned_cols=247 Identities=18% Similarity=0.183 Sum_probs=204.7
Q ss_pred eecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhH
Q 018820 78 LGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGS 154 (350)
Q Consensus 78 l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~a 154 (350)
|++|.+ |++. ++.+.++.+.+..++ ..++|.+..|+|+||+++++. ++|....+ .++|++ |.|+.++
T Consensus 36 LgqGfp-~~~~----P~fv~ea~~~~~~~~-~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~--~~eVlV--T~GA~~a 105 (420)
T KOG0257|consen 36 LGQGFP-DFPP----PKFVTEAAKNAAKEP-STNQYTRGYGLPQLRKALAKAYSEFYGGLLDP--DDEVLV--TAGANEA 105 (420)
T ss_pred ccCCCC-CCCC----cHHHHHHHHHHhccc-hhccccccCCchHHHHHHHHHHHHHhccccCC--cccEEE--ecCchHH
Confidence 999999 6543 344555555554333 457899999999999999998 45554443 788999 9999999
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee------cCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 155 LRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY------DPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 155 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~------~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
+.. .|++++++||+|++.+|.|+.|...++.+|.+++.++.. ..++|.+|++.++..+..+++ +|++|+
T Consensus 106 i~~--~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk---~Ii~nt 180 (420)
T KOG0257|consen 106 ISS--ALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTK---AIILNT 180 (420)
T ss_pred HHH--HHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCcc---EEEEeC
Confidence 987 677889999999999999999999999999999999984 255699999999999988777 999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+.+++|+++|+++|++||+++|+||+|..|.|++ .+...+..+....+++|.++||||+||+.|||+||++
T Consensus 181 PhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~i 258 (420)
T KOG0257|consen 181 PHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAI 258 (420)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecCCchhheEEEeccccceeeeeeeeeeeee
Confidence 99999999999999999999999999999999999999986 2223333444455699999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+ +.+.+.+..++.......++..|.++...+.
T Consensus 259 --gp-----~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 259 --GP-----KHLYSALFPVHQNFVFTCPTPIQEASAAAFA 291 (420)
T ss_pred --ch-----HHhhhhHHHHhhccccccCcHHHHHHHHHHh
Confidence 76 6777877777776666677777777666554
No 12
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3e-40 Score=327.64 Aligned_cols=277 Identities=14% Similarity=0.175 Sum_probs=207.7
Q ss_pred ccccchHhh----ccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCC
Q 018820 59 PILGVTVAY----NKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD 134 (350)
Q Consensus 59 ~i~~~~~~~----~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~ 134 (350)
+|.++...+ ..+...++|+|++|+| +..+.+.+.+.+.++....... .....|.|..|.++||+++|+|+....
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lR~aiA~~~~~~~ 125 (462)
T PLN02187 48 TLRGVIYMLFDNCGKDVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRS-GKGNSYGPGAGILPARRAVADYMNRDL 125 (462)
T ss_pred hHhhHHHHHHhhcccCCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCChHHHHHHHHHHHHHhc
Confidence 455554433 3334678999999988 4322122233344444443322 334679999999999999999964322
Q ss_pred CCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 135 ~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
...+.+++|++ |+|+++++.++ +.+++.|||.|++++|+|+.|...++..|++++.+++.+++++++|++.+++.+
T Consensus 126 ~~~~~~~~I~i--t~G~~~al~~~--~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~ 201 (462)
T PLN02187 126 PHKLTPEDIFL--TAGCNQGIEIV--FESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIA 201 (462)
T ss_pred CCCCCcccEEE--eCCHHHHHHHH--HHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhc
Confidence 22355899999 99999999984 445578999999999999999999999999999999844456999999999887
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
..++ .+++++|||||||.+++.+++++|+++|++||++||+||+|.+|.+++ ....++..+.. ..++|+++|||
T Consensus 202 ~~~~---~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~--~~~~s~~~~~~-~~~vi~l~SfS 275 (462)
T PLN02187 202 DENT---VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGD--NPFVSMGKFAS-IVPVLTLAGIS 275 (462)
T ss_pred CCCc---EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCceeHHHhcc-CCcEEEEecch
Confidence 6543 378889999999999999999999999999999999999999998864 22223444432 24799999999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhccc--ccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPM--YSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~q~i~~~~L~~ 349 (350)
|.|++||||+||++ +++++..-++++.+..+.... ..+++.+.|.++..+|++
T Consensus 276 K~f~~pGlRiG~~v--~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~ 330 (462)
T PLN02187 276 KGWVVPGWKIGWIA--LNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK 330 (462)
T ss_pred hhcCCccceeEEEE--ecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence 99999999999988 765543223344555544433 235689999999999863
No 13
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-40 Score=321.81 Aligned_cols=255 Identities=13% Similarity=0.144 Sum_probs=200.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccC-CcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRE-NRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~-~~v~~~~t~ 149 (350)
.+++.|+|++|.| +. .+.+.+++++...... ...+.|. ..|.++||+++|+++.......+.+ ++|++ |+
T Consensus 30 ~~~~~i~l~~g~p-~~----~~~~~~~~~~~~~~~~-~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~ 100 (399)
T PRK07681 30 AGHKMIDLSIGNP-DM----PPADFVREEMVHTANQ-KESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLL--LM 100 (399)
T ss_pred cCCCeEEeCCCCC-CC----CCCHHHHHHHHHHHhc-cccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE--CC
Confidence 3568999999988 42 2255667766665422 2234464 5899999999999964322222446 79999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
|+++++.++ +.+++.+||.|++++|+|+.|..+++..|+++++||+ ++ +++.+|++.+++.+..++ .+++++|
T Consensus 101 G~~~al~~~--~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~~~~~~---k~v~l~~ 174 (399)
T PRK07681 101 GSQDGLVHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPL-KKENDFLPDLELIPEEIADKA---KMMILNF 174 (399)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEec-CCCCCCcCCHHHHHHhccccc---eEEEEeC
Confidence 999999884 4456789999999999999999999999999999999 54 357889999988875433 3778889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....+...+....+++|+++||||.||++|+|+||++
T Consensus 175 P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i 252 (399)
T PRK07681 175 PGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI 252 (399)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC--CCCCChhhCCCCcccEEEEeecccccCCccceeEEEe
Confidence 99999999999999999999999999999999999998764 2212222222223589999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++++.+.........+++.+.|.++..+|++
T Consensus 253 --~~-----~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 286 (399)
T PRK07681 253 --GN-----EEIVRALTQFKSNTDYGVFLPIQKAACAALRN 286 (399)
T ss_pred --cC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 76 56777777666655567889999999999875
No 14
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-40 Score=320.07 Aligned_cols=269 Identities=14% Similarity=0.155 Sum_probs=208.3
Q ss_pred CCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCC
Q 018820 55 APEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD 134 (350)
Q Consensus 55 ~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~ 134 (350)
.....+..+.+..++ .++.|+|++|.| +.. +....++++...+. . ....|++..|.++||+++++++....
T Consensus 13 ~~~~~~~~~~~~~~~--~~~~i~l~~g~p-~~~---~~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~~~~~~~ 83 (384)
T PRK06348 13 MEVNIMAEIATLAKK--FPDIIDLSLGDP-DLI---TDESIINAAFEDAK--K-GHTRYTDSGGDVELIEEIIKYYSKNY 83 (384)
T ss_pred CCccHHHHHHHHHHh--cCCcEEcCCCCC-CCC---CCHHHHHHHHHHHh--c-CCCCCCCCCCcHHHHHHHHHHHHHHh
Confidence 333344344444332 457899999988 422 22344444544443 2 24679999999999999999964322
Q ss_pred CCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 135 ~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
...+.+++|++ |+|+++++.++ +.+++.+||+|++++|+|++|...++..|.+++.+++.+++++.+|++.+++.+
T Consensus 84 ~~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 159 (384)
T PRK06348 84 DLSFKRNEIMA--TVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALI 159 (384)
T ss_pred CCCCChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhh
Confidence 22244899999 99999999884 455578999999999999999999999999999998844556889999999988
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
+.+++ ++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ...+...+....+++|+++|||
T Consensus 160 ~~~~~---~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfS 233 (384)
T PRK06348 160 TSKTK---AIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFS 233 (384)
T ss_pred CcCcc---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecch
Confidence 65433 66778999999999999999999999999999999999999998863 2223333432246899999999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|.+|+||+|+||++ ++ +.+++.+..+......+++.++|.++..+|.+
T Consensus 234 K~~~l~GlRiG~~v--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 281 (384)
T PRK06348 234 KDFAMTGWRIGYVI--AP-----DYIIETAKIINEGICFSAPTISQRAAIYALKH 281 (384)
T ss_pred hccCCccccceeee--cC-----HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC
Confidence 99999999999988 87 56777777777666567899999999888764
No 15
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.8e-40 Score=327.65 Aligned_cols=267 Identities=19% Similarity=0.145 Sum_probs=201.0
Q ss_pred CCCCeEEeecccccC---------------CCCC----------ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 71 PSPVKLNLGVGAYRT---------------EEGK----------PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~---------------~~~~----------p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
++.++|+|++|+|.+ ...| .++..+++++.+.+.........|++..|.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 346899999999921 2221 113456665544333212234669999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+|+++.......+.+++|++ |+|+++++.+++ .+++ .+||.|++++|+|+.|..+++.+|++++.|++..+++|+
T Consensus 124 ia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~--~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~ 199 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFL--TDGASSGIKLLL--QLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWS 199 (481)
T ss_pred HHHHHHHhcCCCCChhhEEE--cCCHHHHHHHHH--HHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCC
Confidence 99996533223345899999 999999999844 4456 699999999999999999999999999999983345689
Q ss_pred CCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-
Q 018820 205 LNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF- 280 (350)
Q Consensus 205 ~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~- 280 (350)
+|++.+++.++.. ..+..+++++|||||||.+++.+++++|+++|++||++||+||+|.+|.|++. ....++..+
T Consensus 200 ~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~ 278 (481)
T PTZ00377 200 LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVL 278 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHH
Confidence 9999999988641 11234677779999999999999999999999999999999999999988421 111232222
Q ss_pred ---hhc---CCcEEEEeccccc-cCccCcceeEEEEee--CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 ---VAD---GGECFIAQSYAKN-LGLYGERVGALSIVC--KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 ---~~~---~~~vi~~~S~SK~-~gl~G~RvG~l~~v~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
... +.++|+++||||. ++++|||+||++ + .+ +.+++++.+++. ...+++.++|.++..+|++
T Consensus 279 ~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~--~~~~p----~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 279 LELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFE--LTNIP----PEVREQIYKLAS-INLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred HhhcccccCCeEEEEEecCCcccccCCcCceEEEE--EeCCC----HHHHHHHHHHhh-eecCCChHHHHHHHHHhCC
Confidence 111 2379999999998 599999999988 5 23 456666666554 3446889999999999864
No 16
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-40 Score=320.00 Aligned_cols=277 Identities=14% Similarity=0.136 Sum_probs=204.3
Q ss_pred CCCCCCCCccccchH---hhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 51 HVVRAPEDPILGVTV---AYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~---~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
++...+.+++..+.+ ++++ .+++.++|++|.| +.. .+...++++.+.+. ......|++.+|.++||+++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~g~p-~~~---~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lR~~ia 81 (403)
T PRK08636 9 KIKRLPKYVFAEVNELKMAARR-AGEDIIDFSMGNP-DGP---TPQHIIDKLCESAQ--KPKTHGYSVSKGIYKLRLAIC 81 (403)
T ss_pred HHHhCCccHHHHHHHHHHHHHh-cCCCEEEcCCcCC-CCC---CCHHHHHHHHHHhc--CCccCCCCCCCCCHHHHHHHH
Confidence 344444444433333 3333 3567899999988 432 23455666555544 223467999999999999999
Q ss_pred HHHhCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec-CCCCCC
Q 018820 128 KLILGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD-PATRGL 205 (350)
Q Consensus 128 ~~~~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~ 205 (350)
+|+.......+.++ +|++ |+|+++++.++ +.+++.+||.|++++|+|+.|..+++..|+++++||+ + ++++++
T Consensus 82 ~~l~~~~~~~~~~~~~I~i--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~ 156 (403)
T PRK08636 82 NWYKRKYNVDLDPETEVVA--TMGSKEGYVHL--VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPL-EYNEDFEL 156 (403)
T ss_pred HHHHHHhCCCCCCCCeEEE--CCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEec-cccccCcc
Confidence 99632211123366 7999 99999999884 4566889999999999999999999999999999998 4 345889
Q ss_pred CHHHH----HHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh
Q 018820 206 NFQGL----LEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV 281 (350)
Q Consensus 206 d~~~l----~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~ 281 (350)
|++.+ ++.+++...+..+++++|||||||.++|.+++++|+++|++|+++||+||+|.+|.+++ ...+++..+.
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~ 234 (403)
T PRK08636 157 DEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVE 234 (403)
T ss_pred ChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCC
Confidence 98865 44444433345688889999999999999999999999999999999999999998763 2223333332
Q ss_pred hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 282 ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 282 ~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
...+++|+++||||.||+||+|+||++ ++ +++++.+.++......+++.+.|.++..+++
T Consensus 235 ~~~~~~i~~~S~SK~~~~~GlRiG~iv--~~-----~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~ 294 (403)
T PRK08636 235 GAKDVAVESYTLSKSYNMAGWRVGFVV--GN-----KKLVGALKKIKSWLDYGMFTPIQVAATIALD 294 (403)
T ss_pred CccccEEEEEecccccCCccceeeeee--CC-----HHHHHHHHHHHHHhcccCChHHHHHHHHHHh
Confidence 223578899999999999999999987 76 5666666665554444566778887776664
No 17
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.2e-39 Score=317.77 Aligned_cols=272 Identities=14% Similarity=0.129 Sum_probs=204.7
Q ss_pred CCCCCCCccccchHhhc---cCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHH
Q 018820 52 VVRAPEDPILGVTVAYN---KDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAK 128 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~---~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~ 128 (350)
+.+.+.+.+..+.+.++ +..+.+.|+|++|.| +.. +.+.++++..... . ....|++..|.++||+++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p-~~~----~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~ 76 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEP-KHP----TPAFIKDALAANL--D-GLASYPTTAGLPALREAIAA 76 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCC-CCC----CCHHHHHHHHHHh--h-hhcCCCCCCCCHHHHHHHHH
Confidence 34445555544444443 334678999999998 422 2456666666544 2 24679999999999999999
Q ss_pred HHh---CCCCCCccC-CcEEEEecCCchhHHHHHHHHHHHhcC---CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC
Q 018820 129 LIL---GADSPAIRE-NRVTTVQCLSGTGSLRVGAEFLARHYH---QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA 201 (350)
Q Consensus 129 ~~~---g~~~~~~~~-~~v~~~~t~G~~~al~l~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~ 201 (350)
|+. |.+ .+.+ ++|++ |+|+++++.++ +.+++.+ ||.|++++|+|+.|..+++..|++++.+|+..++
T Consensus 77 ~~~~~~g~~--~~~~~~~i~i--t~G~~~al~~~--~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~ 150 (396)
T PRK09147 77 WLERRYGLP--ALDPATQVLP--VNGSREALFAF--AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPAN 150 (396)
T ss_pred HHHHHhCCC--cCCccceEEE--CCChHHHHHHH--HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccc
Confidence 963 433 0235 48999 99999999884 4455788 8999999999999999999999999999993344
Q ss_pred CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHH-HHHH
Q 018820 202 TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQS-VRMF 280 (350)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~-~~~~ 280 (350)
+|++|++.+++.+.+++ .+++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++. ....+ ....
T Consensus 151 ~~~~d~~~l~~~~~~~~---k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~ 226 (396)
T PRK09147 151 NFAPDFDAVPAEVWART---QLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEA-APPLGLLEAA 226 (396)
T ss_pred cCccCHHHHHHHHhhcc---EEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCC-CCCchhhhhc
Confidence 68999999988775433 3777899999999999999999999999999999999999999987641 11111 1111
Q ss_pred h----hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 281 V----ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 281 ~----~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
. ...+++|+++||||.|+++|+|+||++ ++ +.+++++.+.......+++.+.|.++...+.
T Consensus 227 ~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~--~~-----~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 227 AELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA--GD-----AALLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred cccCccccccEEEEeccccccCCccceeeeec--CC-----HHHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 1 123589999999999999999999988 77 5666666665544445678888888766664
No 18
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=314.41 Aligned_cols=266 Identities=23% Similarity=0.304 Sum_probs=204.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCC--CCccCCcEEEEecC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADS--PAIRENRVTTVQCL 149 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~--~~~~~~~v~~~~t~ 149 (350)
..+|+|.++|.+. +++.+++.+.++++...+. ....+.|++.+|.++||+++++++..... .+...++|++ |+
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~i--t~ 76 (388)
T PRK08637 2 KATKYNATIGMAT-EKGGPMYLSSLQDLLNDLT--PDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIV--TN 76 (388)
T ss_pred CccceecceeeEe-cCCCcchHHHHHHHHHhhc--cccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeE--cc
Confidence 3578999999994 5556788888888877754 34557899999999999999999765432 1111367888 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEec
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHA 227 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~ 227 (350)
|+++++.+++ .+++.+||.|++++|+|+.|...+. ..|++++.||+ ..+++++|++.+++.++. ..+...+++++
T Consensus 77 G~~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~-~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~ 153 (388)
T PRK08637 77 ALTHGLSLVA--DLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPI-FDEDGGFDTDALKEALQAAYNKGKVIVILN 153 (388)
T ss_pred chHHHHHHHH--HHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecc-cCCCCcCCHHHHHHHHHhhccCCCEEEEEe
Confidence 9999998854 4457899999999999999999865 68999999998 433467999999998862 12335578899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-----cCcEEEEccCCCCCCCCCCCCchHHH-HHHhhcCCcE--EEEeccccccCc
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRS-----KGLLPFFDSAYQGFASGSLDSDAQSV-RMFVADGGEC--FIAQSYAKNLGL 299 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~-----~~~~ii~DeaY~~~~~~~~~~~~~~~-~~~~~~~~~v--i~~~S~SK~~gl 299 (350)
|||||||.+++.+++++|+++|++ |+++||+||+|.+|.+++ +...+. ..+.+..+++ ++++||||.|++
T Consensus 154 ~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~--~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~ 231 (388)
T PRK08637 154 FPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYED--SYKESLFAALANLHSNILAVKLDGATKEEFV 231 (388)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCC--ccchhhHHHhhcccccceEEEeccccccCCC
Confidence 999999999999999999999875 899999999999999864 222222 2333333464 556799999999
Q ss_pred cCcceeEEEEeeC-----ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 300 YGERVGALSIVCK-----TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 300 ~G~RvG~l~~v~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||+|+||++ ++ +++..+.+...+....+..++++|.+.|.++..+|++
T Consensus 232 pGlRlG~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 284 (388)
T PRK08637 232 WGFRVGFIT--FGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNS 284 (388)
T ss_pred cccceEEEE--EccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCC
Confidence 999999988 54 3445555544433333444568899999999999976
No 19
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=327.67 Aligned_cols=261 Identities=18% Similarity=0.194 Sum_probs=203.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+.++|+|++|+| +..+.+.+..+++++.+.+. . ...|++..|.++||+++++++.......+.+++|++ |+|
T Consensus 144 ~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~---~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~i--t~G 216 (517)
T PRK13355 144 AGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLT---D-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYT--GNG 216 (517)
T ss_pred cCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhh---c-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEE--eCc
Confidence 4678999999998 43333334555555555543 2 346999999999999999996444333356899999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+++..+++|.+|++.+++.+..+++ +++++|||
T Consensus 217 ~~eal~~~--~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k---~i~i~nP~ 291 (517)
T PRK13355 217 VSELINLS--MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTK---AIVIINPN 291 (517)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCce---EEEEECCC
Confidence 99999884 45568899999999999999999999999999999983334589999999998865443 78889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|++||++||+||+|.+|.+++ ....++..+. ....+|+++||||.|+++|||+||++
T Consensus 292 NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~--~~~~s~~~~~-~~~~vi~~~S~SK~~~~~G~RiG~~i-- 366 (517)
T PRK13355 292 NPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG--LEHTSIASLA-PDLFCVTFSGLSKSHMIAGYRIGWMI-- 366 (517)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC--CCcccHHHhC-CCCeEEEEecchhhccCcccceEEEE--
Confidence 999999999999999999999999999999999999864 2223333332 22358889999999999999999988
Q ss_pred eC-ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CK-TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++.++.++..+..+. ....+++.++|.++..+|++
T Consensus 367 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~ 405 (517)
T PRK13355 367 LSGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGG 405 (517)
T ss_pred eeCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcC
Confidence 54 4444455665554433 33346888999999888864
No 20
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.5e-39 Score=316.91 Aligned_cols=265 Identities=16% Similarity=0.171 Sum_probs=203.7
Q ss_pred CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 70 DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 70 ~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
..+.++|+|++|+| +......+.+.++++...... ......|+|..|.++||+++++++.......+.+++|++ |+
T Consensus 28 ~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~ 103 (409)
T PLN02656 28 ENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQ-SNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TS 103 (409)
T ss_pred ccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eC
Confidence 35678999999999 421112334566666655442 233467999999999999999996433222345889999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|+++++.+++ .+++.+||.|++++|+|+.|....+..|++++.+++.+++++.+|++.+++.++.++ .++++++|
T Consensus 104 G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~---~~v~l~~P 178 (409)
T PLN02656 104 GCTQAIDVAL--SMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNT---VALVIINP 178 (409)
T ss_pred ChHHHHHHHH--HHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCc---eEEEEECC
Confidence 9999998844 445789999999999999999999999999999998434568899999998876543 37788899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||.+++.+++++|+++|++++++||+||+|.+|.+++ +...+...+ ....++|+++||||.|+++|||+||++
T Consensus 179 ~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i- 254 (409)
T PLN02656 179 GNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS--NPFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFV- 254 (409)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCcccHHHh-cccCcEEEEcccchhccCcceeEEEEE-
Confidence 9999999999999999999999999999999999999864 222233333 234589999999999999999999988
Q ss_pred eeCChhHH---HHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 310 VCKTADVA---GRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 310 v~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++.+ ..+++++.+.... +.+++.+.|.++..+|++
T Consensus 255 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~ 295 (409)
T PLN02656 255 -TTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQ 295 (409)
T ss_pred -EeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhc
Confidence 7643211 2455555554443 456789999999999863
No 21
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.7e-39 Score=315.88 Aligned_cols=255 Identities=15% Similarity=0.105 Sum_probs=191.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN-RVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~ 149 (350)
.+.+.|+|++|++ +.. + .+.+.++......+ ....+|++..|.++||+++|+|+.......+.++ +|++ |+
T Consensus 28 ~~~~~i~l~~~~~-~~~---~-~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~ 99 (388)
T PRK07366 28 AGKELIDLSLGSS-DLP---A-PAHALEAIAQSLHD-PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LI 99 (388)
T ss_pred cCCCeEEeCCCCC-CCC---C-CHHHHHHHHHHHhC-cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CC
Confidence 4567999999998 322 1 34455555444312 2346799999999999999999643222224476 6999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+..++ .++++++|
T Consensus 100 Gs~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~---k~i~l~~p 174 (388)
T PRK07366 100 GSQEGTAHL--PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQA---RLMVLSYP 174 (388)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccc---eEEEEeCC
Confidence 999999884 4455789999999999999999999999999999999323457889999887765433 37788999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||.+++.+++++|+++|++|+++||+||+|.+|.+++. ...+++..+.....++|+++||||.||+||+|+||++
T Consensus 175 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v- 252 (388)
T PRK07366 175 HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI- 252 (388)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehc-
Confidence 99999999999999999999999999999999999988641 1122333332233479999999999999999999988
Q ss_pred eeCChhHHHHHHHHHHHhhcccccCC-ChhHHHHHHHH
Q 018820 310 VCKTADVAGRVESQVKLVIRPMYSNP-PIHGASIVAAI 346 (350)
Q Consensus 310 v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~q~i~~~~ 346 (350)
++ +++++++.++......+. +...+.+++.+
T Consensus 253 -~~-----~~li~~l~~~~~~~~~~~~~~~~~~a~~~l 284 (388)
T PRK07366 253 -GN-----AQLIQALRQVKAVVDFNQYRGILNGAIAAL 284 (388)
T ss_pred -CC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHH
Confidence 76 567777766665444444 33344444444
No 22
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.6e-39 Score=316.21 Aligned_cols=253 Identities=15% Similarity=0.144 Sum_probs=196.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~ 146 (350)
.+++.|+|+.|.| +.. ..+.+.++...... .....+|+|..|.++||+++++|+. |.+ +.++ +|++
T Consensus 30 ~~~~~i~l~~~~p-~~~----~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~---~~~~~~i~i- 99 (389)
T PRK08068 30 EGHDVINLGQGNP-DQP----TPEHIVEALQEAAE-NPANHKYSPFRGYPFLKEAAADFYKREYGVT---LDPETEVAI- 99 (389)
T ss_pred cCCCeEEecCCCC-CCC----CCHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCCCccEEE-
Confidence 3567899999988 422 23445555555431 2334679999999999999999963 443 3366 7998
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+...+ .++++
T Consensus 100 -t~G~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~---~~v~l 173 (389)
T PRK08068 100 -LFGGKAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKA---KLMYL 173 (389)
T ss_pred -cCCcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccc---eEEEE
Confidence 99999999883 4556789999999999999999999999999999999333468889999998885433 37888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+|||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....+........+++|+++||||.||++|+|+||
T Consensus 174 ~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 174 NYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG--QKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred ECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC--CCCcChhhCCCccCCEEEEecchhccCCccceeEe
Confidence 9999999999999999999999999999999999999988753 11112211222235899999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ ++ +.+++++.+.......+++...|.++..+|.
T Consensus 252 ~~--~~-----~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 286 (389)
T PRK08068 252 AV--GN-----ESVIEAINLLQDHLFVSLFGAIQDAAIEALL 286 (389)
T ss_pred Ee--cC-----HHHHHHHHHHHhhccCCCChHHHHHHHHHHh
Confidence 88 76 5677777777666556666667777777664
No 23
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.1e-39 Score=315.06 Aligned_cols=273 Identities=17% Similarity=0.202 Sum_probs=212.4
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
.+.+++..+.+ ++....... ..++.|+|+.|.| +. .+.+.+.++..+.... ....|+|.+|.++||++++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~~~--~~~~~i~l~~g~p-~~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia 76 (384)
T PRK12414 7 PRSKLPDVGTT-IFTVIGQLA--AQHDALNLSQGAP-NF----APDPALVEGVARAMRD--GHNQYAPMAGIAALREALA 76 (384)
T ss_pred HHHhcccCCcc-HHHHHHHHH--HhCCeEEcCCCCC-CC----CCCHHHHHHHHHHHHh--CCCCcCCCCCcHHHHHHHH
Confidence 45566666553 444444433 2467999999998 32 2256666666654422 2367999999999999999
Q ss_pred HHH---hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 128 KLI---LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 128 ~~~---~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+++ +|.+..+ +++|++ |+|+++++.++ +.+++.+||+|++++|+|..|..+++..|++++.+++ +++++.
T Consensus 77 ~~l~~~~g~~~~~--~~~i~i--t~g~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~ 149 (384)
T PRK12414 77 EKTERLYGARYDP--ASEVTV--IASASEGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKL-SPEDFR 149 (384)
T ss_pred HHHHHHhCCCCCC--CCcEEE--ECChHHHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEec-Cccccc
Confidence 984 4543321 368999 99999999884 4556789999999999999999999999999999998 655688
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.++.. ..++++++||||||.+++.+++++|+++|++|++++|+||+|.+|.+++ ....++..+....
T Consensus 150 ~d~~~l~~~l~~~---~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~--~~~~~~~~~~~~~ 224 (384)
T PRK12414 150 VNWDEVAAAITPR---TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDG--ARHHSMARHRELA 224 (384)
T ss_pred cCHHHHHhhcCcc---cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCC--CCccCcccCcCcc
Confidence 9999999988643 3377889999999999999999999999999999999999999998864 1112232222223
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++|+++||||.||++|+|+||++ ++ +++++.+.++......+++.+.|.++..+|.+
T Consensus 225 ~~~i~~~SfSK~~~~pGlRiG~~v--~~-----~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~ 282 (384)
T PRK12414 225 ERSVIVSSFGKSYHVTGWRVGYCL--AP-----AELMDEIRKVHQFMVFSADTPMQHAFAEALAE 282 (384)
T ss_pred CcEEEEecccccccCccceEEEEe--cC-----HHHHHHHHHHHhheecCCCcHHHHHHHHHhcC
Confidence 589999999999999999999988 77 56777777766655567889999999999875
No 24
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-39 Score=316.14 Aligned_cols=254 Identities=16% Similarity=0.181 Sum_probs=200.6
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccC-CcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRE-NRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~-~~v~~~~ 147 (350)
..+.|+|++|.+ +..+ ++....++..+.+. ......|++..|.++||+++++++ +|.+ +.+ ++|++
T Consensus 38 ~~~~i~l~~g~~-~~~~--p~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~---~~~~~~I~i-- 107 (405)
T PRK06207 38 PGRPVDFSHGDV-DAHE--PTPGAFELFSAGVE--RGGVQAYTEYRGDADIRELLAARLAAFTGAP---VDAADELII-- 107 (405)
T ss_pred CCCceecCCcCC-CCCC--CCHHHHHHHHHHHh--cCCCccCCCCCCCHHHHHHHHHHHHHHhCCC---CCCCCCEEE--
Confidence 456899999998 4222 22334444444443 223457999999999999999995 3433 336 89999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee---cCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY---DPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~---~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|+|+++++.++ +.+++.+||.|++++|+|+.|..+++..|++++.+++. .++++++|++.+++.+...++ ++
T Consensus 108 t~Ga~~al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k---~v 182 (405)
T PRK06207 108 TPGTQGALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVR---VF 182 (405)
T ss_pred eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCe---EE
Confidence 99999999884 44567899999999999999999999999999999972 123588999999998865443 78
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
++++||||||.+++.+++++|+++|++||++||+||+|.+|.+++ ....++..+....+++|+++||||.|+++|+|+
T Consensus 183 ~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRi 260 (405)
T PRK06207 183 LFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG--TSYTHLRALPIDPENVITIMGPSKTESLSGYRL 260 (405)
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCchhcCCCCcCcEEEEecchhhccCcccce
Confidence 889999999999999999999999999999999999999998864 111223333223468999999999999999999
Q ss_pred eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 305 GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 305 G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 261 G~ii--~~-----~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 298 (405)
T PRK06207 261 GVAF--GS-----PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE 298 (405)
T ss_pred EEEE--cC-----HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC
Confidence 9987 77 56777777776666667888999999998864
No 25
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3.1e-39 Score=315.47 Aligned_cols=276 Identities=17% Similarity=0.197 Sum_probs=211.8
Q ss_pred CccccchHhhccCC--CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCC
Q 018820 58 DPILGVTVAYNKDP--SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADS 135 (350)
Q Consensus 58 ~~i~~~~~~~~~~~--~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~ 135 (350)
+++..+.+.++++. +.+.++|++|.| +..++..+.+.+.++......+ .....|.|..|.++||+++++++...+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~aia~~~~~~~~ 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDS-GKYNGYAPTVGALSAREAIASYYHNPDG 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhc-cCCCCCCCCCCCHHHHHHHHHHHhhcCC
Confidence 45555555555543 346799999999 4322344466677776665422 2335699999999999999999754332
Q ss_pred CCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 136 PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 136 ~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
.+.+++|++ |+|+++++.++. .+++.+||+|++++|+|..|..+++..|++++.+++..++++++|++.+++.+.
T Consensus 92 -~~~~~~i~~--t~G~~~al~~~~--~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~ 166 (401)
T TIGR01264 92 -PIEADDVVL--CSGCSHAIEMCI--AALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID 166 (401)
T ss_pred -CCCHHHEEE--CcChHHHHHHHH--HHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc
Confidence 256889999 999999998854 455789999999999999999999999999999998334468899999998876
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
..++ ++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+.. ..++|+++||||
T Consensus 167 ~~~~---~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~vi~~~SfSK 240 (401)
T TIGR01264 167 EKTA---ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG--ATFEPLASLSS-TVPILSCGGLAK 240 (401)
T ss_pred cCce---EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC--cccccHHHcCC-CCcEEEEccCcc
Confidence 5433 67889999999999999999999999999999999999999998764 22233333322 236999999999
Q ss_pred ccCccCcceeEEEEeeCCh-hHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 296 NLGLYGERVGALSIVCKTA-DVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 296 ~~gl~G~RvG~l~~v~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.|+++|+|+||++ ++++ +.+..+++.+..+.. ...+++.+.|.++..+|++
T Consensus 241 ~~~~~GlRiG~iv--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 292 (401)
T TIGR01264 241 RWLVPGWRLGWII--IHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLR 292 (401)
T ss_pred cCCCccceEEEEE--ecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHh
Confidence 9999999999988 7753 234456666665543 3456788999999988864
No 26
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.6e-39 Score=314.05 Aligned_cols=254 Identities=15% Similarity=0.132 Sum_probs=198.1
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~ 146 (350)
.++++++|+.|.| +.. +.+.+.++...... ....++|++..|.++||+++++|+. |.+. .++ +|++
T Consensus 27 ~~~~~~~l~~~~~-~~~----~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~---~~~~~vi~- 96 (383)
T TIGR03540 27 EGVDVISLGIGDP-DLP----TPKHIVEALCKAAE-NPENHRYPSYEGMLAYRQAVADWYKRRFGVEL---DPETEVLS- 96 (383)
T ss_pred cCCCeEEeCCCCC-CCC----CCHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCC---CCCCeEEE-
Confidence 4678999999988 422 24555555554432 2234679999999999999999964 3332 244 6888
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++ +..++.+||.|++++|+|+.|..+++..|++++.||+.+++++.+|++.+++.+..++ .++++
T Consensus 97 -t~G~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~---~~v~i 170 (383)
T TIGR03540 97 -LIGSKEGIAHI--PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKA---KLMFI 170 (383)
T ss_pred -CCCcHHHHHHH--HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccc---eEEEE
Confidence 99999999884 3455789999999999999999999999999999998334467789999998876533 37788
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
++||||||.+++.+++++|+++|++||++||+||+|.+|.+++ ....+...+.....++|+++||||.||++|+|+||
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~ 248 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG--YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGM 248 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC--CCCcCcccCCCcccCEEEEEecccccCCccceeeE
Confidence 8999999999999999999999999999999999999998753 22223333322235789999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ ++ +.+++++.........+++.+.|.++..+|++
T Consensus 249 ~i--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (383)
T TIGR03540 249 AV--GN-----ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG 284 (383)
T ss_pred Ee--CC-----HHHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 87 76 45666666655545557778889998888865
No 27
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-39 Score=313.27 Aligned_cols=254 Identities=17% Similarity=0.149 Sum_probs=198.1
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~ 146 (350)
.+++.++|+.|.| +. .+.+.+.++....... .....|++..|.++||+++++|+. |.+.. ++ +|++
T Consensus 29 ~~~~~i~l~~~~~-~~----~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~---~~~~ii~- 98 (385)
T PRK09276 29 RGVDVISLGIGDP-DL----PTPDHIIEAMCKAVED-PENHQYPSYEGMLEFRKAVADWYKRRFGVELD---PETEVIS- 98 (385)
T ss_pred cCCCEEEecCCCC-CC----CCCHHHHHHHHHHHhC-CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---CCCcEEE-
Confidence 4677999999988 42 2245566666554422 234679999999999999999964 44333 55 5888
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++. ..++.+||.|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+..++ .++++
T Consensus 99 -t~G~~~~i~~~~--~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~---~~v~l 172 (385)
T PRK09276 99 -LIGSKEGIAHIP--LAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKA---KLMFI 172 (385)
T ss_pred -ccCcHHHHHHHH--HHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccc---eEEEE
Confidence 999999998843 445789999999999999999999999999999998434467789999988776433 37888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ....++..+....+++|+++||||.||++|+|+||
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 173 NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG--YKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC--CCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 8999999999999999999999999999999999999998753 22223333322235789999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ ++ +.+++.+.+.......+++.+.|.++..+|++
T Consensus 251 ~i--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 286 (385)
T PRK09276 251 AV--GN-----ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG 286 (385)
T ss_pred ee--CC-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC
Confidence 88 76 45666666665555556777888888888754
No 28
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=313.81 Aligned_cols=263 Identities=14% Similarity=0.187 Sum_probs=201.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+.++|+|++|+| +..+...+.+.++++...... ......|++..|.++||+++++++.......+.+++|++ |+|+
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALR-SGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGC 126 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHH-cCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCH
Confidence 558999999998 322112223344454444331 223347999999999999999997543333355899999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. ..+..+||+|++++|+|+.|.......|++++.+++..+++|.+|++.+++.+..+++ +++++||||
T Consensus 127 ~~al~l~~--~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~i~i~~P~N 201 (430)
T PLN00145 127 AQAIEIIM--SVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTV---AMVIINPNN 201 (430)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCce---EEEEeCCCC
Confidence 99999854 4446899999999999999999999999999999974455689999999988765443 788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+. ...++|+++||||.|++||||+||++ +
T Consensus 202 PtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK~~~~pG~RlG~iv--~ 276 (430)
T PLN00145 202 PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS--KPFVPMGVFG-EVAPVLTLGSISKRWVVPGWRLGWIA--T 276 (430)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC--CCccchhhhc-ccCcEEEEeccccccCCCCeeEEEEE--E
Confidence 99999999999999999999999999999999999864 2223333342 34589999999999999999999988 6
Q ss_pred CChh-HHH--HHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTAD-VAG--RVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~-~~~--~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++++ ... .++..++... ..+.+++.+.|.++..+|.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 277 CDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred ecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhc
Confidence 4433 222 2344455443 34556789999999888864
No 29
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=311.61 Aligned_cols=270 Identities=16% Similarity=0.210 Sum_probs=207.9
Q ss_pred CCCCCCCccccchHhhcc--CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 018820 52 VVRAPEDPILGVTVAYNK--DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL 129 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~ 129 (350)
+.+..+..+..+.+...+ ...++.++|+.|.+ +. + +.+.+.++..+.... ....|.+..|.++||++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~---~-~~~~v~~a~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~ 81 (387)
T PRK08960 9 SRDIEPFHVMALLARANELEAAGHDVIHLEIGEP-DF---T-TAEPIVAAGQAALAA--GHTRYTAARGLPALREAIAGF 81 (387)
T ss_pred HHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCC-CC---C-CCHHHHHHHHHHHhc--CCCccCCCCCCHHHHHHHHHH
Confidence 334444455554443321 14568999999999 32 2 245555655554422 235699999999999999999
Q ss_pred HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHH
Q 018820 130 ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQ 208 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~ 208 (350)
+.......+.+++|++ |+|+++++.+++ ..++.+||.|++++|+|+.|...++..|.+++.+++ +++ ++.+|++
T Consensus 82 ~~~~~g~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~ 156 (387)
T PRK08960 82 YAQRYGVDVDPERILV--TPGGSGALLLAS--SLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPV-GPDSRYQLTPA 156 (387)
T ss_pred HHHHhCCCCChhhEEE--ccCcHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEec-CcccCCCCCHH
Confidence 6321111234899999 999999998854 445789999999999999999999999999999998 544 5789999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.+++++ .++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ +..+. ....+++|
T Consensus 157 ~l~~~~~~~~---~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi 227 (387)
T PRK08960 157 LVERHWNADT---VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAF 227 (387)
T ss_pred HHHHHhCccc---eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEE
Confidence 9999876543 377889999999999999999999999999999999999999998753 11222 22345899
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++||||.||++|+|+||++ ++ +.+++.+..+......+++.+.|.++..+|++
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~--~~-----~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLV--AP-----PAAVPELEKLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred EEeecccccCCcccEEEEEE--cC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 99999999999999999988 87 56777777776666667899999998888753
No 30
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.3e-38 Score=319.83 Aligned_cols=263 Identities=18% Similarity=0.153 Sum_probs=202.1
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
..++.|+|+.|.+ .++.++++++.+.+.... .....|++..|.++||+++|+|+...+...+.+++|++ |+
T Consensus 127 ~~p~~i~~~~~~~------~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 127 DHPSLLDKSETHG------LFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred cCCccCCCCCccc------cCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 3578899987655 334588888887665322 23577999999999999999997654444466899999 99
Q ss_pred CchhHHHHHHHHHHHh-cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC---CCcEEEE
Q 018820 150 SGTGSLRVGAEFLARH-YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP---AGAIVLL 225 (350)
Q Consensus 150 G~~~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~l~ 225 (350)
|+++++.++. ..++ .+||.|+++.|+|+.|...++..|+++++|++.++++|++|++.+++.++... .+..+++
T Consensus 199 Ga~~ai~~~~--~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMMM--QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHHH--HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999854 3445 47999999999999999999999999999998323468999999999886521 1244777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh------cCCcEEEEecccccc-C
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA------DGGECFIAQSYAKNL-G 298 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~------~~~~vi~~~S~SK~~-g 298 (350)
++|||||||.+++.+++++|+++|+++|++||+||+|+++.|++. +...++..+.. ...++|+++||||.| |
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 789999999999999999999999999999999999999998531 22223433321 123699999999976 8
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|||+||+++...++ .+++++.++.. ...+++..+|.++..++++
T Consensus 356 ~pGlRiGy~~~~~~~~----~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 356 ECGKRGGYMEVTGFTS----DVREQIYKVAS-VNLCSNISGQILASLVMSP 401 (534)
T ss_pred CCccceEEEEEecCCH----HHHHHHHHHHh-hhcCCChHHHHHHHHHhCC
Confidence 9999999988322243 45555555443 3456788899998888864
No 31
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-38 Score=311.16 Aligned_cols=252 Identities=16% Similarity=0.190 Sum_probs=198.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~ 146 (350)
.++++|+|+.|.| +. +.+...++++.+.+. ......|++..|.++||+++++|+. +.+ +.++ +|++
T Consensus 33 ~g~~~i~l~~g~p-~~---~~p~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~---~~~~~~i~v- 102 (394)
T PRK05942 33 QGLDLIDLGMGNP-DG---AAPQPVIEAAIAALA--DPQNHGYPPFEGTASFRQAITDWYHRRYGVE---LDPDSEALP- 102 (394)
T ss_pred cCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHh--CCCCccCCCCCCCHHHHHHHHHHHHHHHCCC---cCCCCeEEE-
Confidence 4567999999988 32 223445665555554 2334679999999999999999963 433 3365 5888
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++ +.+++.+||+|++++|+|+.|...+...|++++++++ ++ +++.+|++.+++.+.+++ .+++
T Consensus 103 -t~G~~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~~~~~---k~i~ 175 (394)
T PRK05942 103 -LLGSKEGLTHL--ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIIL-KPENDWLIDLSSIPEEVAQQA---KILY 175 (394)
T ss_pred -ccChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeec-CCccCCccCHHHHHHhccccc---eEEE
Confidence 99999999884 3455789999999999999999999999999999998 54 457899999998886533 3788
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++..+.....++|+++||||.||++|+|+|
T Consensus 176 l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG 253 (394)
T PRK05942 176 FNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDG--YQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred EcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCC--CCCCChhhCCCccccEEEEecchhccCChhhhee
Confidence 88999999999999999999999999999999999999998754 1112333332223468999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
|++ ++ +.+++.++........+++...|.++..+|+
T Consensus 254 ~i~--~~-----~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 289 (394)
T PRK05942 254 FVV--GN-----RHIIQGLRTLKTNLDYGIFSALQKAAETALQ 289 (394)
T ss_pred eee--cC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 988 76 5666777666655555678889999888885
No 32
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-38 Score=311.03 Aligned_cols=251 Identities=15% Similarity=0.116 Sum_probs=197.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~~ 147 (350)
+.++|+|++|+| +.. +.+.+.+++..... ......|++ .|.++||+++|+|+. |.+ .+.++ +|++
T Consensus 43 ~~~~i~L~~g~p-~~~----~~~~~~~~l~~~~~-~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~--~~~~~~~I~i-- 111 (410)
T PRK06290 43 DMELIDMGVGEP-DEM----ADESVVEVLCEEAK-KPENRGYAD-NGIQEFKEAAARYMEKVFGVK--DIDPVTEVIH-- 111 (410)
T ss_pred CCCeEEcCCCCC-CCC----CCHHHHHHHHHHHh-CCCCCCCCC-CCcHHHHHHHHHHHHHHcCCC--cCCCcceEEE--
Confidence 446899999998 432 24445555544331 223355864 899999999999963 433 13355 7999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+|+ ++ +++.+|++.+++.+..++ .++++
T Consensus 112 t~Gs~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~~~d~~~l~~~~~~~~---k~i~l 185 (410)
T PRK06290 112 SIGSKPALAML--PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPL-LEENNFLPDLDSIPKDIKEKA---KLLYL 185 (410)
T ss_pred ccCHHHHHHHH--HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEec-CCCcCCcCCHHHHHHhhcccc---eEEEE
Confidence 99999999884 4455789999999999999999999999999999999 54 357889999998876533 37888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ .. .+...+....+++|+++||||.||++|+|+||
T Consensus 186 ~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~--~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 186 NYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG--KP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC--CC-cChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 8999999999999999999999999999999999999998763 11 22222322235789999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ ++ +.+++.+........++++.+.|.++..+|++
T Consensus 263 ii--~~-----~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 298 (410)
T PRK06290 263 VV--GN-----ELIVKAFATVKDNNDSGQFIAIQKAGIYALDH 298 (410)
T ss_pred EE--eC-----HHHHHHHHHHHhccccCCcHHHHHHHHHHhhC
Confidence 88 76 56777777777666677788999999998876
No 33
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=2.9e-38 Score=311.54 Aligned_cols=264 Identities=14% Similarity=0.146 Sum_probs=197.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+.++++|++|+| +..+ ..+++.++++...+..+ .....|.|..|.++||+++++|+.......+.+++|++ |+|
T Consensus 30 ~g~~~~~~~~G~p-~~~~-~~~p~~~~~a~~~~~~~-~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G 104 (433)
T PRK06855 30 LGVKITWENIGDP-IAKG-EKIPDWMKEIVAELVMD-DKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNG 104 (433)
T ss_pred ccccccccccCCC-cccC-CCCCHHHHHHHHHHhhc-CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCc
Confidence 3457899999998 3211 22345566665555422 33467999999999999999996433222355899999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
+++++.++. ..+.+||.|++++|+|+.|.... ...|++++.+++.++++|++|++.+++.++..++ ..++++++|
T Consensus 105 ~~~al~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~-~~~i~l~~P 180 (433)
T PRK06855 105 LGDAIAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPS-IAGILLINP 180 (433)
T ss_pred HHHHHHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCC-ceEEEEECC
Confidence 999998853 35789999999999999987653 4568999999983245688999999998864322 236777899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||.+++.+++++|+++|+++|++||+||+|.+|.|++ ....++..+.. ..++|+++||||.|++||||+||++
T Consensus 181 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii- 256 (433)
T PRK06855 181 DNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIE- 256 (433)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEE-
Confidence 9999999999999999999999999999999999998864 22234444432 2368999999999999999999988
Q ss_pred eeCC---hhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 310 VCKT---ADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 310 v~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++ ++.+..+.+.+..... ...+++.+.|.++..+|++
T Consensus 257 -~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~ 297 (433)
T PRK06855 257 -VYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSH 297 (433)
T ss_pred -EeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcC
Confidence 643 2223344454444433 2346788999999999875
No 34
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.3e-38 Score=308.56 Aligned_cols=257 Identities=18% Similarity=0.156 Sum_probs=196.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCC-CCC-CccC-CcEEEEe
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGA-DSP-AIRE-NRVTTVQ 147 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~-~~~-~~~~-~~v~~~~ 147 (350)
.+.+.|+|++|+| +.. +.+.+++++.... . ....|++..|.++||+++|+|+... +.. .+.+ ++|++
T Consensus 26 ~~~~~i~l~~~~p-~~~----~~~~~~~a~~~~~--~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i-- 95 (393)
T TIGR03538 26 ASKPPIALSIGEP-KHP----TPAFVLEALRENL--H-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLP-- 95 (393)
T ss_pred cCCCeEEecCCCC-CCC----CCHHHHHHHHHHh--h-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEE--
Confidence 4578999999998 432 2456666666544 2 2467999999999999999996332 111 1336 47998
Q ss_pred cCCchhHHHHHHHHHHHhcCCCE--EEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRT--IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~--Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++ +..++.+||. |++++|+|+.|..+++..|++++.+++.+++++.+|++.+++.+.++++ +++
T Consensus 96 t~Ga~~al~~~--~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k---~i~ 170 (393)
T TIGR03538 96 VNGTREALFAF--AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQ---LLF 170 (393)
T ss_pred CCCcHHHHHHH--HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcce---EEE
Confidence 99999999884 4455789986 9999999999999999999999999993344588999999988765433 677
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh----cCCcEEEEeccccccCccC
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA----DGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~----~~~~vi~~~S~SK~~gl~G 301 (350)
++|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++..........+.. ..+++|+++||||.|+++|
T Consensus 171 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G 250 (393)
T TIGR03538 171 VCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG 250 (393)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc
Confidence 789999999999999999999999999999999999999987531011111112211 2358999999999999999
Q ss_pred cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 302 ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 302 ~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+||++ ++ +.+++++.++......+++.+.|.++...+.+
T Consensus 251 lRvG~~i--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 251 LRSGFVA--GD-----AEILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred cceEEEe--cC-----HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 9999987 77 55666666655544456788888887776653
No 35
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.8e-38 Score=310.49 Aligned_cols=253 Identities=17% Similarity=0.174 Sum_probs=193.9
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~ 146 (350)
.+++.|+|+.|.| +.. + .+.+.++...... .....+|++..|.++||+++|+++. |... .++ +|++
T Consensus 28 ~~~~~i~l~~~~p-~~~---~-~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~---~~~~~I~i- 97 (405)
T PRK09148 28 AGADIIDLGMGNP-DLP---T-PQHIVDKLCETAQ-DPRTHRYSASKGIPGLRRAQAAYYARRFGVKL---NPDTQVVA- 97 (405)
T ss_pred cCCCeEEcCCCCC-CCC---C-CHHHHHHHHHHHc-CcccCCCCCCCCCHHHHHHHHHHHHHHhCCCC---CCCCcEEE-
Confidence 4567899999988 422 2 3444444444431 2234679999999999999999963 4433 365 8999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++ +..++.+||.|++++|+|+.|...++..|++++.|++ +.+ ++ ++.+++.++....+..+++
T Consensus 98 -t~G~~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~---~~~l~~~~~~~~~~~~~v~ 170 (405)
T PRK09148 98 -TLGSKEGFANM--AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPA-EPDEEF---FPALERAVRHSIPKPIALI 170 (405)
T ss_pred -cCChHHHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeC-CCCCCC---ccCHHHHHhhccccceEEE
Confidence 99999999884 4455789999999999999999999999999999998 433 23 3445555543323445888
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
+++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ....++..+....+++|+++||||.||+||+|+|
T Consensus 171 l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 171 VNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG--NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC--CCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 89999999999999999999999999999999999999998753 1112232232223478999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|++ ++ +.+++++.++......+++.+.|.++..+|++
T Consensus 249 ~~v--~~-----~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~ 285 (405)
T PRK09148 249 FAV--GN-----ERLIAALTRVKSYLDYGAFTPIQVAATAALNG 285 (405)
T ss_pred eee--CC-----HHHHHHHHHHHHHhccCCChHHHHHHHHHHhC
Confidence 988 76 56777777776655567788999999999874
No 36
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-38 Score=309.45 Aligned_cols=273 Identities=20% Similarity=0.200 Sum_probs=207.4
Q ss_pred cchHhhcc-CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCC------C
Q 018820 62 GVTVAYNK-DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGA------D 134 (350)
Q Consensus 62 ~~~~~~~~-~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~------~ 134 (350)
....++.+ ..++++|+|++|.| +.++...+.+.++++....... .....|++..|.++||+++|+|+... .
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~ 98 (412)
T PTZ00433 21 TVTDNAKPSPSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVDS-QECNGYPPTVGSPEAREAVATYWRNSFVHKESL 98 (412)
T ss_pred HHHHhhccCCCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCCCcHHHHHHHHHHHHhhccccccc
Confidence 44445543 25678999999999 4321123466677776665422 23467999999999999999996421 1
Q ss_pred CCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 135 ~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
...+.+++|++ |+|+++++.+++ .+++.+||+|++++|+|+.|..+++..|++++.+++.+++++++|++.+++.+
T Consensus 99 ~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 99 KSTIKKDNVVL--CSGVSHAILMAL--TALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred cCCCChhhEEE--eCChHHHHHHHH--HHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 12345899999 999999999854 45578999999999999999999999999999999833346899999999887
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
+..+ .+++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+.. ..++|+++|||
T Consensus 175 ~~~~---~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~~i~~~SfS 248 (412)
T PTZ00433 175 DDRT---KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFDT-TVPRVILGGTA 248 (412)
T ss_pred ccCc---eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhccC-CCceEEEccch
Confidence 6543 367789999999999999999999999999999999999999998864 22223333322 23689999999
Q ss_pred cccCccCcceeEEEEeeCChh-HHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTAD-VAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|.||+||+|+||++ +++++ ..+.+++.+.+... ...+++.+.|.++..+|.+
T Consensus 249 K~~~~pGlRlG~~i--~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 249 KNLVVPGWRLGWLL--LVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLN 301 (412)
T ss_pred hhcCCCCeeEEEEE--EeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhc
Confidence 99999999999988 63322 12346666666543 3346889999999888864
No 37
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=5.2e-38 Score=305.94 Aligned_cols=275 Identities=14% Similarity=0.183 Sum_probs=208.8
Q ss_pred cCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 018820 50 SHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL 129 (350)
Q Consensus 50 ~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~ 129 (350)
+++.....+.+..+.+... ..++.|+|+.|.+ +. .+.+.++++...... .....|.|..|.++||++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~-~~----~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~ 79 (391)
T PRK07309 9 KQLDKIEVSLIRQFDQSIS--DIPGILKLTLGEP-DF----TTPDHVKEAAKRAID--ANQSHYTGMAGLLELRQAAADF 79 (391)
T ss_pred hhhhhcCccHHHHHHHHHH--hcCCeEEcCCCCC-CC----CCCHHHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHH
Confidence 3344444443333333222 2367999999998 42 224566666665441 2234699999999999999999
Q ss_pred HhCCCCCCcc-CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHH
Q 018820 130 ILGADSPAIR-ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQ 208 (350)
Q Consensus 130 ~~g~~~~~~~-~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 208 (350)
+.......+. +++|++ |+|+++++.++ +..++.+||.|++++|+|++|..+++..|++++.++. +++++.+|++
T Consensus 80 ~~~~~~~~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~ 154 (391)
T PRK07309 80 VKEKYNLDYAPENEILV--TIGATEALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPE 154 (391)
T ss_pred HHHHhCCCCCCCCcEEE--eCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHH
Confidence 6432111122 578998 99999999884 4455789999999999999999999999999999997 6656789999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.+++.+++..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ +...+...+ ..+++|
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~--~~~~~~~~~--~~~~~i 230 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTG--EPHVSIAEY--LPDQTI 230 (391)
T ss_pred HHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCC--CCCCCHHHh--ccCCEE
Confidence 9999887643334577888999999999999999999999999999999999999999853 222233222 236899
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++||||.||++|+|+||++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 231 ~~~S~SK~~g~~GlRvG~~v--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK07309 231 LINGLSKSHAMTGWRIGLIF--AP-----AEFTAQLIKSHQYLVTAATTMAQFAAVEALTN 284 (391)
T ss_pred EEecChhhccCccceeEEEE--eC-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHhC
Confidence 99999999999999999988 77 55666666554444557888999999998875
No 38
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3.6e-38 Score=306.66 Aligned_cols=253 Identities=13% Similarity=0.176 Sum_probs=199.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN-RVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~G 150 (350)
.++.|+|++|.| +. ++.+.++++...... .....|.+..|.++||+++++++.......+.++ +|++ |+|
T Consensus 27 ~~~~i~l~~~~p-~~----~~~~~~~~a~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~--t~G 97 (387)
T PRK07683 27 YDNLISLTIGQP-DF----PTPSHVKEAAKRAIT--ENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIV--TIG 97 (387)
T ss_pred cCCeEEecCCCC-CC----CCCHHHHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCC
Confidence 467899999988 42 224556666666552 2346799999999999999999642211123366 8999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++|+.++. ..++.+||.|++++|+|++|..+++..|++++.++. +++++.+|.+.+++.+..++ .++++++||
T Consensus 98 ~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~---~~i~i~~p~ 171 (387)
T PRK07683 98 ASEAIDIAF--RTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDT-RSTGFRLTAEALENAITEKT---RCVVLPYPS 171 (387)
T ss_pred hHHHHHHHH--HHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeec-CcccCCCCHHHHHHhcCcCc---eEEEEeCCC
Confidence 999998843 445789999999999999999999999999999998 66677788899998876543 367889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|+++.+++ + ..+...+.+...++|+++||||.||+||+|+||++
T Consensus 172 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~-- 246 (387)
T PRK07683 172 NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ--P-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLF-- 246 (387)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC--C-cCChhhccCCcCCeEEEeeccccccCccceeEEEE--
Confidence 999999999999999999999999999999999998753 1 12333332234589999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++.+.......+++.+.|.++..+|.+
T Consensus 247 ~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 280 (387)
T PRK07683 247 AP-----SYLAKHILKVHQYNVTCASSISQYAALEALTA 280 (387)
T ss_pred cC-----HHHHHHHHHHHHhccCCCChHHHHHHHHHHhC
Confidence 77 55666666655444556778899999988864
No 39
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.2e-38 Score=311.10 Aligned_cols=255 Identities=16% Similarity=0.206 Sum_probs=195.5
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhc----------CCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND----------RSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRE 140 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~----------~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~ 140 (350)
+.|+|+++++ +...+.+++.++..... ......|++..|.++||+++|+|+. +... .+.+
T Consensus 39 g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~-~v~~ 111 (468)
T PLN02450 39 GIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKV-TFDP 111 (468)
T ss_pred eeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCC-CcCh
Confidence 6999999988 33346666666553210 0123459889999999999999964 3221 2458
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHHHhhcC--
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-- 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 217 (350)
++|++ |+|+++++.++ +.+++.+||.|++++|+|+.|...+. ..|+++++||+.+++++.+|++.+++.+++.
T Consensus 112 ~~Iii--t~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~ 187 (468)
T PLN02450 112 NKLVL--TAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQK 187 (468)
T ss_pred HHeEE--ccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHh
Confidence 99999 99999999884 45668899999999999999998888 5899999999833567888999999887652
Q ss_pred -CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHH-HHHHhh-------cCCcEE
Q 018820 218 -PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQS-VRMFVA-------DGGECF 288 (350)
Q Consensus 218 -~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~-~~~~~~-------~~~~vi 288 (350)
..+..+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...+ ...+.. ..++++
T Consensus 188 ~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~vi 265 (468)
T PLN02450 188 LNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNRVH 265 (468)
T ss_pred cCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCcEE
Confidence 22344778889999999999999999999999999999999999999887641 1112 222211 245899
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++||||.|+++|+|+||++ ++++. ++..+.+.. .+.+++.+.|.++..+|+|
T Consensus 266 ~l~S~SK~~~l~GlRiG~li--~~~~~----l~~~~~~~~--~~~~~s~~~Q~a~~~~L~~ 318 (468)
T PLN02450 266 IVYSLSKDLGLPGFRVGAIY--SNDEM----VVSAATKMS--SFGLVSSQTQYLLSALLSD 318 (468)
T ss_pred EEEeccccCCCCCccEEEEE--ECCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCC
Confidence 99999999999999999988 87543 333344432 3345788999999999987
No 40
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4.4e-38 Score=304.92 Aligned_cols=250 Identities=16% Similarity=0.169 Sum_probs=198.0
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccC-CcEEEEec
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRE-NRVTTVQC 148 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~-~~v~~~~t 148 (350)
++.|+|+.|.| +.. +.+.+.++...... . ....|.+..|.++||+++|+++. |... .+ ++|++ |
T Consensus 20 ~~~i~l~~~~~-~~~----~~~~~~~~~~~~~~-~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~---~~~~~i~~--t 87 (378)
T PRK07682 20 EGVISLGVGEP-DFV----TPWNVREASIRSLE-Q-GYTSYTANAGLLELRQEIAKYLKKRFAVSY---DPNDEIIV--T 87 (378)
T ss_pred CCeEEeCCCCC-CCC----CCHHHHHHHHHHHh-c-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCC---CCCCcEEE--e
Confidence 57899999999 432 13344555444331 2 23569999999999999999964 4332 24 47999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
+|+++++.++ +.+++.+||+|++++|+|+.|...++..|.+++.+++..++++++|++.+++.+... ..++++++
T Consensus 88 ~G~~~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~v~~~~ 162 (378)
T PRK07682 88 VGASQALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAK---TKAILLCS 162 (378)
T ss_pred CChHHHHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcc---cEEEEEEC
Confidence 9999999884 455678999999999999999999999999999998722345889999999988653 33677889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+++.+++++|+++|++|++++|+||+|.+|.+++ . ..+...+....+++|+++||||.|+++|+|+||++
T Consensus 163 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~ 239 (378)
T PRK07682 163 PNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE--A-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA 239 (378)
T ss_pred CCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC--C-CCChhhcccccCCEEEEecCcccccChhhhhhhhh
Confidence 99999999999999999999999999999999999999863 1 12233333323689999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++.........+++.+.|.++..+|++
T Consensus 240 --~~-----~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 273 (378)
T PRK07682 240 --AP-----VYFSEAMLKIHQYSMMCAPTMAQFAALEALRA 273 (378)
T ss_pred --cC-----HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhC
Confidence 76 56677676666555667889999999999865
No 41
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=5.1e-38 Score=305.57 Aligned_cols=251 Identities=17% Similarity=0.239 Sum_probs=199.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
..++.++|+.|.+ +.. +.+.+.++...... .....|++..|.++||+++|+|+.......+.+++|++ |+|
T Consensus 28 ~~~~~i~l~~~~~-~~~----~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G 98 (388)
T PRK07337 28 AGRDIIHMGIGEP-DFT----APEPVVEAAARALR--RGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAG 98 (388)
T ss_pred cCCCEEEeCCcCC-CCC----CCHHHHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecC
Confidence 4678999999998 422 23445555554441 22356999999999999999996322111234889999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
+++++.+++ ..++.+||+|++++|+|+.+...++..|++++.+|+ ++ +++++|++.+++.+..+++ ++++++|
T Consensus 99 ~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~---~v~l~~p 172 (388)
T PRK07337 99 ASAALLLAC--LALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPS-GPAERFQLTAADVEAAWGERTR---GVLLASP 172 (388)
T ss_pred cHHHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeec-CCccCCcCCHHHHHhhcCccce---EEEEECC
Confidence 999998854 445789999999999999999999999999999998 54 4689999999998865433 6778999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||.+++.+++++|+++|+++++++|+||+|.+|.+++ . ..+. ...++++|+++||||.||++|+|+||++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~-~~~~---~~~~~~vi~~~S~SK~~~~~G~RiG~~~- 245 (388)
T PRK07337 173 SNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA--A-PVSA---LSLGDDVITINSFSKYFNMTGWRLGWLV- 245 (388)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC--C-CcCh---hhccCCEEEEEechhhcCCchhheeeee-
Confidence 9999999999999999999999999999999999998753 1 1111 1234689999999999999999999988
Q ss_pred eeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 310 VCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 310 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++++++.........+++.+.|.++..++.+
T Consensus 246 -~~-----~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 279 (388)
T PRK07337 246 -VP-----EALVGTFEKLAQNLFICASALAQHAALACFEP 279 (388)
T ss_pred -cC-----HHHHHHHHHHHHHhccCCChHHHHHHHHHhcc
Confidence 77 56777777777666677899999998888763
No 42
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1e-37 Score=303.28 Aligned_cols=271 Identities=17% Similarity=0.146 Sum_probs=207.1
Q ss_pred CCccccchHhhcc--CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCC
Q 018820 57 EDPILGVTVAYNK--DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD 134 (350)
Q Consensus 57 ~~~i~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~ 134 (350)
+..+..+.+.+.+ +++.+.|+|+.|.+ +. .+.+.+.+++..... ......|.+..|.++||+++++++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-~~----~~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~ 84 (386)
T PRK07550 11 PPPIPEVRAWLAGYDGADGPLIDLSQAVP-GY----PPPPELLRALAEAAA-DPAAHLYGPVEGLPELREAYAAHYSRLY 84 (386)
T ss_pred ChHHHHHHHHHHHHhhcCCCeEEeCCCCC-CC----CCCHHHHHHHHHHHh-CcCCcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 4445454443321 24567999999998 32 224556666665542 2334679999999999999999964322
Q ss_pred CCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 135 ~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
...+.+++|++ |+|+++++.++ +.+++.+||+|++++|+|++|..+++..|++++.|++.+++++.+|++.+++.+
T Consensus 85 g~~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~ 160 (386)
T PRK07550 85 GAAISPEQVHI--TSGCNQAFWAA--MVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALI 160 (386)
T ss_pred CCCCCcceEEE--ecCcHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHh
Confidence 22244799999 99999999884 344578999999999999999999999999999999832356778999999988
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
+..++ ++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ....+.......+.++|+++|||
T Consensus 161 ~~~~~---~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~S 235 (386)
T PRK07550 161 TPRTR---AIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG--GAPHDLFADPDWDDTLVHLYSFS 235 (386)
T ss_pred cccCc---EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC--CCCcchhhCCCccccEEEEecch
Confidence 76433 55667899999999999999999999999999999999999997642 11111111112245899999999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|.||++|+|+||++ ++ +++++++...+.....+++.++|.++..+|++
T Consensus 236 K~~g~~G~RiG~i~--~~-----~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 283 (386)
T PRK07550 236 KSYALTGHRVGAVV--AS-----PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN 283 (386)
T ss_pred hhccCcccceEeee--cC-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc
Confidence 99999999999988 76 56677777777666778899999999988864
No 43
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.6e-38 Score=308.80 Aligned_cols=259 Identities=16% Similarity=0.151 Sum_probs=187.7
Q ss_pred cchHhhccC-CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCC
Q 018820 62 GVTVAYNKD-PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND---RSRVKEYLPIVGLAEFNKLSAKLILGADSPA 137 (350)
Q Consensus 62 ~~~~~~~~~-~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~---~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~ 137 (350)
....++++. .+++.++|+.|++ +... .+.+.++......+ ......|.|..|.++||+++|+++.......
T Consensus 22 ~~~~~~~~~~~~~~~i~l~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 22 RRVNAFREANPEAKIIRLGIGDV-TQPL----PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHhhhcCCCceEEecCcCC-CCCC----CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 334444431 2567999999998 4332 33444444433311 1234679999999999999999964333223
Q ss_pred ccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe-----------EEEEEeecC-CCCCC
Q 018820 138 IRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS-----------VKSYRYYDP-ATRGL 205 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-----------~~~v~~~~~-~~~~~ 205 (350)
+.+++|++ |+|+++++.++. ..+.+||+|++++|+|+.|..+++..|++ ++.+|+ ++ +++.+
T Consensus 97 ~~~~~I~i--t~Ga~~al~~l~---~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~-~~~~~~~~ 170 (409)
T PRK07590 97 ISADEIFI--SDGAKCDTGNIL---DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPC-TAENNFVP 170 (409)
T ss_pred CChhhEEE--CCCHHHHHHHHH---HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeec-ccccCCcc
Confidence 55899999 999999998742 44679999999999999999999999997 889998 53 34555
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++. . +..+++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ....++..+....+
T Consensus 171 d~~~------~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~~ 239 (409)
T PRK07590 171 ELPE------E---KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP--SLPHSIYEIEGARE 239 (409)
T ss_pred cCcc------c---CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC--CCCcchhhCCCccc
Confidence 5321 2 23367778999999999999999999999999999999999999998753 11123333322234
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHH------------HHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVES------------QVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~------------~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+++||||.||+||+|+||++ ++ +.++. .........+.+++.+.|.++..+|++
T Consensus 240 ~vi~~~SfSK~~~~pGlRiG~~i--~~-----~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 240 CAIEFRSFSKTAGFTGTRCAYTV--VP-----KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred ceEEEecCccccCCcCceeEEEE--cC-----HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 79999999999999999999988 76 33433 122223334456888999999888764
No 44
>PRK07324 transaminase; Validated
Probab=100.00 E-value=4.9e-38 Score=304.25 Aligned_cols=246 Identities=16% Similarity=0.121 Sum_probs=199.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+.++++|++|++ +...+ .+. +++.+.+. . ....|++..|.++||+++++++.+ +.+++|++ |+|
T Consensus 24 ~~~~~~~~~~~e~-~~~~~---~~~-~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G 88 (373)
T PRK07324 24 AESCIDSLTLEEL-LALAG---KNP-EAFYQELG--Q-KKLTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNG 88 (373)
T ss_pred ccCCCCCCcHHHH-HhccC---cch-HHHHHHHh--c-CCccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCC
Confidence 4678999999999 55443 333 44444443 2 235799999999999999998643 23789999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+++.+||+|+++.|+|..|..+++..|++++.+|+..++++.+|++.+++.+..+++ ++++++||
T Consensus 89 ~~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k---li~i~~p~ 163 (373)
T PRK07324 89 ATGANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTK---LICINNAN 163 (373)
T ss_pred hHHHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCc---EEEEeCCC
Confidence 99999884 45568899999999999999999999999999999983334578999999888765444 78889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|++||+++|+||+|.+|.+++ ...++ ....+++|+++||||.||++|+|+||++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i~-- 235 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWIA-- 235 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEEe--
Confidence 999999999999999999999999999999999998763 11222 2234589999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++++.......+++.++|.++..+|++
T Consensus 236 ~~-----~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~ 269 (373)
T PRK07324 236 AN-----EEVIDILRKYRDYTMICAGVFDDMLASLALEH 269 (373)
T ss_pred cC-----HHHHHHHHHHhCcEEecCChHHHHHHHHHHcC
Confidence 76 56777777777666677888999988888764
No 45
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-38 Score=303.61 Aligned_cols=250 Identities=18% Similarity=0.173 Sum_probs=193.6
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCC-cEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIREN-RVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~-~v~~~~ 147 (350)
.+++|+|+.|.| +.. .+.+.++.+.+.+. .. ...|++..|.++||+++++++. |.+ +.++ +|++
T Consensus 25 ~~~~i~l~~g~p-~~~---~p~~~~~~~~~~~~--~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---~~~~~~i~~-- 92 (387)
T PRK08912 25 EHGAINLGQGFP-DDP---GPEDVRRAAADALL--DG-SNQYPPMMGLPELRQAVAAHYARFQGLD---LDPETEVMV-- 92 (387)
T ss_pred hCCeEEccCCCC-CCC---CCHHHHHHHHHHHh--cC-CCCCCCCCCcHHHHHHHHHHHHHHhCCC---CCCcccEEE--
Confidence 357999999999 432 23455555544443 22 3569999999999999999853 433 3366 8999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
|+|+++++.+ .+..++.+||+|++++|+|+.|..+++..|++++.+++ +++++++|++.+++.+...++ +++++
T Consensus 93 t~G~~~al~~--~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~---~v~l~ 166 (387)
T PRK08912 93 TSGATEALAA--ALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRL-EPPHWRLPRAALAAAFSPRTK---AVLLN 166 (387)
T ss_pred eCCcHHHHHH--HHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccCcCCHHHHHHHhCccce---EEEEe
Confidence 9999999987 44556789999999999999999999999999999998 655688999999998865433 67778
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
+||||||.+++.+++++|+++|++|++++|+||+|.+|.+++ ....+...+....+++|+++||||.||++|+|+||+
T Consensus 167 ~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 167 NPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDG--RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCC--CCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 999999999999999999999999999999999999998864 111222222222358999999999999999999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 308 SIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ ++ ..+++.+.........+.+...|.++...|.
T Consensus 245 ~--~~-----~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 278 (387)
T PRK08912 245 C--AA-----PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLG 278 (387)
T ss_pred e--cC-----HHHHHHHHHHHhhccccCChHHHHHHHHHHh
Confidence 8 76 4566666555554434455566776666553
No 46
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.7e-38 Score=304.61 Aligned_cols=261 Identities=18% Similarity=0.216 Sum_probs=203.7
Q ss_pred cccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCC
Q 018820 60 ILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSP 136 (350)
Q Consensus 60 i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~ 136 (350)
++....++.+ ..++|+|+.|.+ +... .+.+.++...... . ....|.+..|.++||+++++++ ++....
T Consensus 19 ~~~~~~~~~~--~~~~i~l~~g~~-~~~~----~~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~ 89 (386)
T PRK09082 19 IFTVMSALAA--EHGAINLSQGFP-DFDG----PPYLVEALAYAMA-A-GHNQYPPMTGVAALREAIAAKTARLYGRQYD 89 (386)
T ss_pred HHHHHHHHHh--hCCEEEecCCCC-CCCC----CHHHHHHHHHHHH-c-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC
Confidence 4444444443 357899999988 4332 3445555555441 2 2356999999999999999984 344322
Q ss_pred CccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 137 AIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 137 ~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+ +++|++ |+|+++++.++ +...+.+||+|++++|+|+.|...++..|++++.++. +++++.+|++.+++.++.
T Consensus 90 ~--~~~i~~--t~G~~~al~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~ 162 (386)
T PRK09082 90 A--DSEITV--TAGATEALFAA--ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVAL-QPPDFRVDWQRFAAAISP 162 (386)
T ss_pred C--CCcEEE--eCCHHHHHHHH--HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccccCCHHHHHHhcCc
Confidence 1 247998 99999999884 3455789999999999999999999999999999998 655788999999998865
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
++ .++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++ +...++..+....+++|+++||||.
T Consensus 163 ~~---~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~ 237 (386)
T PRK09082 163 RT---RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVLRHPELRERAFVVSSFGKT 237 (386)
T ss_pred cc---eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCC--CCCCChhhCcCccCcEEEEeechhh
Confidence 43 367788999999999999999999999999999999999999998863 2112333332334689999999999
Q ss_pred cCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 297 LGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||++|+|+||++ ++ +++++.+++.......+++.+.|.+++.+|+
T Consensus 238 ~~~~G~RiG~iv--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 282 (386)
T PRK09082 238 YHVTGWKVGYCV--AP-----AALSAEFRKVHQYNTFTVNTPAQLALADYLR 282 (386)
T ss_pred ccchhhhhhhhh--CC-----HHHHHHHHHHHhhhcCCCChHHHHHHHHHHh
Confidence 999999999988 77 5677777776665556789999999998886
No 47
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=308.69 Aligned_cols=257 Identities=18% Similarity=0.240 Sum_probs=214.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
..+..++|+.|.+ +.. .++...++++........ .. ...|.+..|.++||+++++++.......+.+++|++ |
T Consensus 87 ~~~~~i~f~~g~p-~~~--~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T 161 (459)
T COG1167 87 DDPSVIDFAGGLP-DPS--LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--T 161 (459)
T ss_pred CCCceecCCCCCC-Ccc--cCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--e
Confidence 3588999999987 432 566888888877765322 22 466888899999999999997622222345789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
+|+++|+.+++. .++.|||+|++++|+|.....+++.+|+++++||+ |+ .|+|++.+++.++..+ .++++++++
T Consensus 162 ~G~q~al~l~~~--~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~-d~--~G~~~e~le~~~~~~~-~k~~y~~P~ 235 (459)
T COG1167 162 SGAQQALDLLLR--LLLDPGDTVLVEDPTYPGALQALEALGARVIPVPV-DE--DGIDPEALEEALAQWK-PKAVYVTPT 235 (459)
T ss_pred CCHHHHHHHHHH--HhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCC-CC--CCCCHHHHHHHHhhcC-CcEEEECCC
Confidence 999999999554 44789999999999999999999999999999999 64 4799999999998763 367899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.|||||++++.+++++|+++|++||++||+||+|++|.+++ ...+++..+ ...++||+++||||++. ||+|+||++
T Consensus 236 ~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~l-d~~~rViy~gSFSK~l~-PglRlG~vv 311 (459)
T COG1167 236 FQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKAL-DAPGRVIYLGSFSKTLA-PGLRLGYVV 311 (459)
T ss_pred CCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhh-CCCCCEEEEeeehhhcc-cccceeeee
Confidence 99999999999999999999999999999999999999975 222233333 33579999999999997 999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++..........++.+.|.+++..|.+
T Consensus 312 --~p-----~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~ 345 (459)
T COG1167 312 --AP-----PELIEKLLRLKQAADLGPSSLSQAALAAFLLS 345 (459)
T ss_pred --CC-----HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHc
Confidence 88 78888888888888889999999999888763
No 48
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-37 Score=300.74 Aligned_cols=256 Identities=19% Similarity=0.180 Sum_probs=200.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.+++|+|++|.+ +.. +.+.++++......+ ....|.+..|.++||+++++++.......+.+++|++ |+|+
T Consensus 23 ~~~~i~l~~g~~-~~~----~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~ 93 (382)
T PRK06108 23 REGVLPLWFGES-DLP----TPDFIRDAAAAALAD--GETFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSG 93 (382)
T ss_pred cCCeEEecCCCC-CCC----CCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCCh
Confidence 457999999998 422 245666666665522 2345999999999999999995322111244889999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec-CCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD-PATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
++++.++ +..++.+||.|++++|+|+.|...++..|++++.+|+.+ ++++.+|++.+++.+..++ .++++++||
T Consensus 94 ~~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~---~~i~l~~p~ 168 (382)
T PRK06108 94 VQALMLA--AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRT---RALFINSPN 168 (382)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccc---eEEEEECCC
Confidence 9999884 345578999999999999999999999999999999832 2357799999998886433 377788999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.+|.++. ....++...+....+++++++||||.||++|+|+||++
T Consensus 169 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~-- 245 (382)
T PRK06108 169 NPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLV-- 245 (382)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeee--
Confidence 999999999999999999999999999999999998761 12222333333334689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++++.+.........+++.+.|.++..+|.+
T Consensus 246 ~~-----~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 279 (382)
T PRK06108 246 AP-----PALGQVLEKLIEYNTSCVAQFVQRAAVAALDE 279 (382)
T ss_pred CC-----HHHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 76 45666666665555677899999998888865
No 49
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=303.90 Aligned_cols=256 Identities=14% Similarity=0.162 Sum_probs=202.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.++++++|+.|.| +.. +.+.+.+++..... . ....|.+..|.++||+++++++.......+.+++|++ |+|
T Consensus 31 ~~~~~i~l~~g~p-~~~----~~~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G 101 (402)
T PRK06107 31 AGRSIVDLTVGEP-DFD----TPDHIKQAAVAAIE-R-GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGG 101 (402)
T ss_pred ccCCEEEcCCCCC-CCC----CCHHHHHHHHHHHH-c-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 4578999999998 322 24556777666552 2 2356999999999999999985322112234789999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++|+.++ +.+.+.+||+|++++|+|..|...+...|.+++.+++..++++.+|++.+++.+..+ ..++++++||
T Consensus 102 ~~~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~ 176 (402)
T PRK06107 102 AKQAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPR---TRWLILNAPS 176 (402)
T ss_pred HHHHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcC---ceEEEEECCC
Confidence 99999884 445578999999999999999999999999998888822345789999999988643 3367788999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhc-CcEEEEccCCCCCCCCCCCCchHHHHHHhh-cCCcEEEEeccccccCccCcceeEEE
Q 018820 231 NPTGVDPTLQQWERIRQLMRSK-GLLPFFDSAYQGFASGSLDSDAQSVRMFVA-DGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~-~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||.+++.++|++|+++|+++ ++++|+||+|.++.+++ ...+++..+.. ..+++|+++||||.|++||+|+||++
T Consensus 177 NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~ 254 (402)
T PRK06107 177 NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDD--EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA 254 (402)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCC--CCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence 9999999999999999999998 99999999999988754 12223333321 23589999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++.+.........+++.+.|.++..+|++
T Consensus 255 --~~-----~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 288 (402)
T PRK06107 255 --GP-----ADLIAAINKLQSQSSSCPSSISQAAAAAALNG 288 (402)
T ss_pred --cC-----HHHHHHHHHHHHhcccCCChHHHHHHHHHhcC
Confidence 77 56777777777666678999999999999863
No 50
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=300.49 Aligned_cols=261 Identities=13% Similarity=0.102 Sum_probs=191.5
Q ss_pred chHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCc
Q 018820 63 VTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENR 142 (350)
Q Consensus 63 ~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~ 142 (350)
+..+.++..+.++++|+.|.| +.. +.+.+.+++.... . ....|++..|.++||+++|+++.......+.+++
T Consensus 14 ~~~~~~~~~~~~~i~l~~~~p-~~~----~~~~~~~a~~~~~--~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~ 85 (374)
T PRK05839 14 LLKEITPNKEYKGLDLTIGEP-QFE----TPKFIQDALKNNA--H-LLNKYPKSAGEESLREAQRGFFKRRFKIELKENE 85 (374)
T ss_pred HHHHhhhcCCCCeEEcCCCCC-CCC----CCHHHHHHHHHHh--h-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcce
Confidence 333444322448999999998 322 1356666655543 2 2467999999999999999996332111244899
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
|++ |+|+++++.+++.++....+||.|++++|+|+.|...++..|++++++++..++++.+|++... + .. ..
T Consensus 86 I~i--t~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~---~k 157 (374)
T PRK05839 86 LIP--TFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QE---VD 157 (374)
T ss_pred EEE--ecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-cc---cc
Confidence 999 9999999987433221114789999999999999999999999999999832345666654432 2 22 23
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-----hcCCcEEEEecccccc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV-----ADGGECFIAQSYAKNL 297 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~-----~~~~~vi~~~S~SK~~ 297 (350)
+++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ..++...+. ...+++|+++||||.|
T Consensus 158 ~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~ 234 (374)
T PRK05839 158 LVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSISKRS 234 (374)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEecccccc
Confidence 77778999999999999999999999999999999999999987542 112221111 1235899999999999
Q ss_pred CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 298 GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 298 gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++||+|+||++ ++ +.+++++.........+.+.+.|.++...|.+
T Consensus 235 ~~~GlRiG~ii--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (374)
T PRK05839 235 SAPGLRSGFIA--GD-----ASILKKYKAYRTYLGCASPLPLQKAAAVAWLD 279 (374)
T ss_pred CCccceeEEEe--cC-----HHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence 99999999988 76 56666666665544456788888888766653
No 51
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-37 Score=300.61 Aligned_cols=254 Identities=16% Similarity=0.204 Sum_probs=200.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCcc-CCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIR-ENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~-~~~v~~~~t~G 150 (350)
.+++++|+.|.+ +. .+.+.+.++........ ....|.+..|.++||+++++++.......+. +++|++ |+|
T Consensus 26 ~~~~~~l~~g~~-~~----~~~~~~~~a~~~~~~~~-~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G 97 (389)
T PRK05957 26 NPGTISLGQGVV-SY----PPPPEAIEALNNFLANP-ENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAG 97 (389)
T ss_pred CCCeEEccCCCC-CC----CCCHHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCC
Confidence 367899999998 32 12455566665544222 3357999999999999999985322111122 678998 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+.+.+||.|++++|+|..|...++..|++++.++. + +++++|++.+++.++.+++ ++++++||
T Consensus 98 ~~~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~k---lv~~~~p~ 170 (389)
T PRK05957 98 SNMAFMNA--ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT-D-DNYQLQPEAIEQAITPKTR---AIVTISPN 170 (389)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec-C-CCCCcCHHHHHHhcCcCce---EEEEeCCC
Confidence 99999874 3445789999999999999999999999999999998 4 3578999999998865443 77788999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...+...+.+...++|+++||||.||++|+|+||++
T Consensus 171 NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~-- 246 (389)
T PRK05957 171 NPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMV-- 246 (389)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEe--
Confidence 9999999999999999999999999999999999988641 111222233334589999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++.........+++.+.|.++..+|++
T Consensus 247 ~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 280 (389)
T PRK05957 247 IP-----IHLLEAIKKIQDTILICPPVVSQYAALGALQV 280 (389)
T ss_pred cC-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence 76 56777777777666678889999999888865
No 52
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.4e-37 Score=304.35 Aligned_cols=260 Identities=17% Similarity=0.212 Sum_probs=195.1
Q ss_pred CCCC-eEEeecccccCCCCCccccHHHHHHHHHHhh----------cCCCCCCCCCCCCcHHHHHHHHHHHhCCC--CCC
Q 018820 71 PSPV-KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN----------DRSRVKEYLPIVGLAEFNKLSAKLILGAD--SPA 137 (350)
Q Consensus 71 ~~~~-~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~----------~~~~~~~Y~p~~G~~~lr~aia~~~~g~~--~~~ 137 (350)
.+|+ .|+|+..++. ...+.+.+.++.... ......-|.+..|.++||+++|+++.... ..+
T Consensus 44 ~np~g~i~l~~aeN~------l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~ 117 (447)
T PLN02607 44 HNPSGVIQMGLAENQ------VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKAR 117 (447)
T ss_pred cCCCceEEEechhhh------hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 4554 9999999882 223333333332110 01122348889999999999999964321 123
Q ss_pred ccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 138 IRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++|++ |+|+++++.++ +.+++.|||.|++++|+|++|...++ ..|+++++|++...+++.+|++.+++++++
T Consensus 118 v~p~~Ivi--t~G~t~al~~l--~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 118 FDPDRIVL--TAGATAANELL--TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred cCHHHeEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 66899999 99999999884 34567899999999999999998887 689999999983344578999999998865
Q ss_pred C---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-----c-CCcE
Q 018820 217 A---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-----D-GGEC 287 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-----~-~~~v 287 (350)
+ ..+..+++++|||||||.+++++++++|+++|++|++++|+||+|.++.+++ .+..++..+.. . .+++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCCcCcE
Confidence 2 2234477889999999999999999999999999999999999999988764 22223333321 1 3589
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
++++||||.||++|+|+||++ +.++ .++..++... .++++|.+.|.+++.+|+|+
T Consensus 272 ~vi~s~SK~fg~~GlRvG~iv--s~n~----~l~~~~~~~~--~~~~~s~~~q~~~~~~L~d~ 326 (447)
T PLN02607 272 HIVYSLSKDLGLPGFRVGTIY--SYND----KVVTTARRMS--SFTLVSSQTQHLLASMLSDE 326 (447)
T ss_pred EEEEcchhcCCCCcceEEEEE--EcCH----HHHHHHHHHh--hcCCCCHHHHHHHHHHhCCc
Confidence 999999999999999999988 7554 3444444433 34567889999999999873
No 53
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.6e-37 Score=305.66 Aligned_cols=260 Identities=17% Similarity=0.187 Sum_probs=191.7
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHH-Hh-h----cCCCCCCCCCCCCcHHHHHHHHHHHhCCCC--CCccCCcEEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LV-N----DRSRVKEYLPIVGLAEFNKLSAKLILGADS--PAIRENRVTT 145 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~-~----~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~--~~~~~~~v~~ 145 (350)
.+|+|+..++.- ...+..+.+++.... +. . .......|.+..|.++||+++|+|+..... ..+.+++|++
T Consensus 47 g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi 124 (496)
T PLN02376 47 GIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM 124 (496)
T ss_pred ceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence 599999998721 001123333332221 10 0 011234588899999999999999643211 2255899999
Q ss_pred EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCc
Q 018820 146 VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGA 221 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~ 221 (350)
|+|+++++.++ +.+++.|||.|++++|+|+.|...++ ..|++++++|+...+++++|++.++++++.. ..+.
T Consensus 125 --t~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~ 200 (496)
T PLN02376 125 --SGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKV 200 (496)
T ss_pred --ccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCe
Confidence 99999999984 45668999999999999999999888 6899999999933456899999998765421 2234
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-------CCcEEEEeccc
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-------GGECFIAQSYA 294 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-------~~~vi~~~S~S 294 (350)
.+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++ .+..++..+... .+++++++|||
T Consensus 201 k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~--~~~~si~~l~~~~~~~~~~~~~v~vv~S~S 278 (496)
T PLN02376 201 KGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG--GDFVSVAEVVNDVDISEVNVDLIHIVYSLS 278 (496)
T ss_pred eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC--CCcccHHHhhccccccccCCCeEEEEEecc
Confidence 577789999999999999999999999999999999999999998764 222344444221 13678899999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|.||+||+|+||++ ++++ .+.+.++... .+..++.+.|.+++.+|+|
T Consensus 279 K~~glpGlRvG~li--~~~~----~l~~~~~~~~--~~~~vs~~~Q~a~~~~L~d 325 (496)
T PLN02376 279 KDMGLPGFRVGIVY--SFND----SVVSCARKMS--SFGLVSSQTQLMLASMLSD 325 (496)
T ss_pred ccCCCCcceEEEEE--ECCH----HHHHHHHHHh--hcCCCCHHHHHHHHHHhCC
Confidence 99999999999988 7654 3333333333 3345789999999999986
No 54
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=9.3e-37 Score=296.63 Aligned_cols=269 Identities=17% Similarity=0.177 Sum_probs=202.2
Q ss_pred CCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-
Q 018820 52 VVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI- 130 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~- 130 (350)
+...+...|..+....+ .++++||++|.| +..++ ....+.+.+.+. . ....|++..|.++||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p-~~~~~---~~~~~~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~ 75 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFP-DEDGP---PEMLEAAQEAIA--G-GVNQYPPGPGIPELRAAIAAQRR 75 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCCC-CCCCC---HHHHHHHHHHHh--c-CCCCCCCCCCCHHHHHHHHHHHH
Confidence 44444444544444443 357999999999 55443 333333333333 2 2356999999999999999984
Q ss_pred --hCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCC
Q 018820 131 --LGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLN 206 (350)
Q Consensus 131 --~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d 206 (350)
+|.+.. ++ +|++ |+|+++++.+ .+.+++.+||.|+++.|+|+.|..+++..|++++.+++.+. .++.+|
T Consensus 76 ~~~g~~~~---~~~~i~~--t~G~~~al~~--~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d 148 (387)
T PRK07777 76 RRYGLEYD---PDTEVLV--TVGATEAIAA--AVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALD 148 (387)
T ss_pred HHhCCCCC---CCCcEEE--eCCcHHHHHH--HHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCC
Confidence 454433 44 7998 9999999987 34566789999999999999999999999999999998333 257799
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~ 286 (350)
++.+++.+.+++ .++++++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++ ....++..+.....+
T Consensus 149 ~~~l~~~~~~~~---~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~--~~~~~~~~~~~~~~~ 223 (387)
T PRK07777 149 LDALRAAVTPRT---RALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDG--ARHLPLATLPGMRER 223 (387)
T ss_pred HHHHHHhcCccc---EEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCC--CCcccHhhCCCCcCc
Confidence 999999886533 377788999999999999999999999999999999999999998854 211233333222358
Q ss_pred EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 287 vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+++||||.||++|+|+||++ ++ +++++.+.........+++...|.++..++.+
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (387)
T PRK07777 224 TVTISSAAKTFNVTGWKIGWAC--GP-----APLIAAVRAAKQYLTYVGGAPFQPAVAHALDH 279 (387)
T ss_pred EEEEeechhhccCcCceeEEEe--cC-----HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC
Confidence 9999999999999999999988 77 55666666665544445677788888877753
No 55
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=7.7e-37 Score=293.44 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=193.6
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecCCchh
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN-RVTTVQCLSGTG 153 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~G~~~ 153 (350)
+++|+.|.| + ..+.+.+++++.+.. . ....|++..|.++||+++++++.......+.++ +|++ |+|+++
T Consensus 2 ~~~~~~g~p-~----~~~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~ 71 (350)
T TIGR03537 2 LFDFGTGDP-K----EPTPPFIRKALIDAV--P-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKE 71 (350)
T ss_pred eEeccCCCC-C----CCCCHHHHHHHHHHH--h-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHH
Confidence 689999988 3 222566777766654 2 246799999999999999999632211123366 8999 999999
Q ss_pred HHHHHHHHHHHhcCC---CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 154 SLRVGAEFLARHYHQ---RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 154 al~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
++.++ +.+++.+| |.|++++|+|+.|...++..|++++.|++.+++++.+|++.+++.+.++++ ++++++||
T Consensus 72 ai~~~--~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~---~i~i~~p~ 146 (350)
T TIGR03537 72 AIFHF--PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETK---IVWINYPH 146 (350)
T ss_pred HHHHH--HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccE---EEEEeCCC
Confidence 99884 34556776 699999999999999999999999999983245678899999998866433 77788999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...+...+ ..+++|+++||||.+|++|+|+||++
T Consensus 147 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~-- 219 (350)
T TIGR03537 147 NPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE---PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVA-- 219 (350)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC---CCCchhhc--CcCCEEEEeecccccCCccccceeee--
Confidence 999999999999999999999999999999999987753 11122222 23589999999999999999999987
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+.+++..+......+++.+.|.++...+.+
T Consensus 220 ~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 253 (350)
T TIGR03537 220 GD-----EKLISFLRKLRANFGVASPDFVQAAAKAAWSD 253 (350)
T ss_pred cC-----HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCC
Confidence 66 55666666665555556777788877666543
No 56
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-37 Score=298.78 Aligned_cols=267 Identities=15% Similarity=0.177 Sum_probs=205.8
Q ss_pred CCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-
Q 018820 52 VVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI- 130 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~- 130 (350)
+.......+..+.+... ..++.|+|+.|.| +.. +.+.++++...... .....|.|..|.++||+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~-~~~----~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~ 84 (391)
T PRK08361 14 INLIQRSKIRELFERAS--KMENVISLGIGEP-DFD----TPKNIKEAAKRALD--EGWTHYTPNAGIPELREAIAEYYK 84 (391)
T ss_pred HHhCCccHHHHHHHHHH--hhcCeEEcCCCCC-CCC----CCHHHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHHHH
Confidence 33333334444444332 2357899999998 321 24667777666552 22356989999999999999995
Q ss_pred --hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCH
Q 018820 131 --LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNF 207 (350)
Q Consensus 131 --~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~ 207 (350)
+|.+ +.+++|++ |+|+++++.++ +.+++.+||.|++++|+|..+...++..|++++.+|+ +++ ++.+|+
T Consensus 85 ~~~g~~---~~~~~i~~--t~G~~~al~~~--~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~ 156 (391)
T PRK08361 85 KFYGVD---VDVDNVIV--TAGAYEATYLA--FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPL-REENEFQPDP 156 (391)
T ss_pred HHhCCC---CCcccEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEec-CCccCCCCCH
Confidence 3443 34789999 99999999884 4455789999999999999999999999999999998 544 578999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++.++..++ ++++++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++ ....+...+ ..+++
T Consensus 157 ~~l~~~i~~~~~---~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~--~~~~~ 229 (391)
T PRK08361 157 DELLELITKRTR---MIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG--AKHYPMIKY--APDNT 229 (391)
T ss_pred HHHHHhcccccE---EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC--CCCCCHhhc--CCCCE
Confidence 999998875433 77788999999999999999999999999999999999999998753 111222222 23589
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+++||||.||++|+|+||++ ++ +++++++.+.......+++.+.|.++..+|++
T Consensus 230 i~~~s~SK~~~~~GlRiG~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK08361 230 ILANSFSKTFAMTGWRLGFVI--AP-----EQVIKDMIKLHAYIIGNVASFVQIAGIEALRS 284 (391)
T ss_pred EEEecCchhcCCcHhhhhhhc--cC-----HHHHHHHHHHHhhhccCCChHHHHHHHHHhcC
Confidence 999999999999999999988 76 45666666655555567888999999888875
No 57
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.1e-36 Score=296.86 Aligned_cols=257 Identities=16% Similarity=0.143 Sum_probs=193.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN-RVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~ 149 (350)
.++++++|+.|.| +... +...+++..+.+. ......|++..|.++||+++++|+.......+.++ +|++ |+
T Consensus 27 ~~~~~i~l~~g~p-~~~~---~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~ 98 (395)
T PRK08175 27 RGEDIIDFSMGNP-DGPT---PPHIVEKLCEVAQ--RPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TI 98 (395)
T ss_pred cCCCeEEcCCCCC-CCCC---CHHHHHHHHHHHh--CCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cc
Confidence 4578999999988 4322 2334444444443 23346799999999999999999642211123355 7999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|+++++.+++ ..++.+||+|++++|+|+.|...++..|++++.|++ ++++ .+++.+++.++....+..++++++|
T Consensus 99 G~~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~--~~~~~l~~~l~~~~~~~~~v~i~~p 173 (395)
T PRK08175 99 GSKEGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL-VEGV--DFFNELERAIRESYPKPKMMILGFP 173 (395)
T ss_pred CcHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEec-ccCC--CcHHHHHHHHhhccCCceEEEEeCC
Confidence 9999998843 455789999999999999999999999999999998 5432 3477888877653223447778899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....+...+....+++|+++||||.||+||+|+||++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~- 250 (395)
T PRK08175 174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG--WKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV- 250 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCC--CCCcchhcCCCcccCEEEEeeccccccCcchhheeee-
Confidence 9999999999999999999999999999999999998753 2112222222223578999999999999999999987
Q ss_pred eeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 310 VCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 310 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++.++......+++.+.|.++..+|++
T Consensus 251 -~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (395)
T PRK08175 251 -GN-----PELVSALARIKSYHDYGTFTPLQVAAIAALEG 284 (395)
T ss_pred -CC-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence 76 45666676666544556677788887777753
No 58
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.9e-36 Score=296.10 Aligned_cols=261 Identities=15% Similarity=0.164 Sum_probs=198.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.++++|+|++|+| +.-+-+.+..++++..+.+. . ...|++..|.++||+++|+++.......+.+++|++ |+|
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G 103 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEAPDEILRDVIRNLP---T-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI--GNG 103 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhh---c-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE--eCC
Confidence 4568999999988 32111233444444444332 2 356999999999999999997543332355889999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+.+.+||.|++++|+|+.|..+++..|.+++.+++..++++.+|++.+++.+..+++ ++++++||
T Consensus 104 ~~~~l~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~---~v~l~~P~ 178 (404)
T PRK09265 104 VSELIVMA--MQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTK---AIVIINPN 178 (404)
T ss_pred hHHHHHHH--HHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccce---EEEEECCC
Confidence 99999884 34557899999999999999999999999999999872234577999999998865433 77888999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+. ...++|+++||||.||+||+|+||++
T Consensus 179 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK~~~~pGlRiG~~v-- 253 (404)
T PRK09265 179 NPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG--AVHISIASLA-PDLLCVTFNGLSKAYRVAGFRVGWMV-- 253 (404)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC--CCcCCHHHcC-CCceEEEEecchhhccCcccceEEEE--
Confidence 999999999999999999999999999999999998764 2212333332 22479999999999999999999988
Q ss_pred eC-ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CK-TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++..+.+++.+..+ .....+++.++|.++..+|.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~ 292 (404)
T PRK09265 254 LSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGG 292 (404)
T ss_pred EeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcC
Confidence 64 444344455555433 234457888999999988864
No 59
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.8e-36 Score=296.16 Aligned_cols=277 Identities=15% Similarity=0.185 Sum_probs=207.7
Q ss_pred CccccchHhhccC--CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCC
Q 018820 58 DPILGVTVAYNKD--PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADS 135 (350)
Q Consensus 58 ~~i~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~ 135 (350)
++|..+...+++. ++.++|+|+.|.| +......+.+.+.++...... ......|.+..|.++||+++++++.....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~l~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~ 91 (403)
T TIGR01265 14 NPIRAIVDNLKVKPNPEKPIIPLSHGDP-SVFGNLRTDPEAEEAVKDALR-SGKFNGYAPSVGALAAREAVAEYLSSDLP 91 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCCC-CccCCCCCCHHHHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence 3455555555542 3578999999998 311113335556666655442 22335699999999999999999653222
Q ss_pred CCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 136 PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 136 ~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
..+.+++|++ |+|+++++.++. .+++.+||+|++++|+|+.|...++..|++++.+++...+++++|++.+++.+.
T Consensus 92 ~~~~~~~ii~--t~G~t~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 167 (403)
T TIGR01265 92 GKLTADDVVL--TSGCSQAIEICI--EALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD 167 (403)
T ss_pred CCCCHHHEEE--ecChHHHHHHHH--HHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC
Confidence 2344789999 999999999854 445689999999999999999999999999999988333467899999998876
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
.+++ ++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+. ...++|+++||||
T Consensus 168 ~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK 241 (403)
T TIGR01265 168 EKTV---AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFA-SIVPVLSLGGISK 241 (403)
T ss_pred cCcc---EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhc-cCCcEEEEeeccc
Confidence 5443 67788999999999999999999999999999999999999998864 2222343442 2247999999999
Q ss_pred ccCccCcceeEEEEeeCCh-hHH-HHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 296 NLGLYGERVGALSIVCKTA-DVA-GRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 296 ~~gl~G~RvG~l~~v~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.|++||+|+||++ ++++ +.+ +++.+.++.... ...+++.+.|.++..+|.+
T Consensus 242 ~~~~pGlRiG~~v--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 294 (403)
T TIGR01265 242 RWVVPGWRLGWII--IHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILEN 294 (403)
T ss_pred ccCCCcceEEEEE--EeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHh
Confidence 9999999999988 7543 222 235555555543 2356889999999888853
No 60
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.2e-37 Score=303.19 Aligned_cols=244 Identities=17% Similarity=0.199 Sum_probs=191.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
....++|+.|.| +.. ..+.+.+++.... .. ...|++..|.++||+++++|+. .... .+++|++ |+|+
T Consensus 84 ~~~~i~L~~g~p-~~~----~~p~~~~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~~~-~~~~--~~~~Iii--t~G~ 150 (431)
T PRK15481 84 GTPLHDLAGGNP-DPQ----RLPDLSRYFARLS--RT-PRLYGDAPVSPELHAWAARWLR-DDCP--VAFEIDL--TSGA 150 (431)
T ss_pred cchhhhhhcCCC-Chh----HhHHHHHHHHHhh--hh-hhhcCCcCCCHHHHHHHHHHHh-hccC--CcCeEEE--ecCc
Confidence 346899999988 422 2344666655543 12 3469999999999999999953 2222 1568999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++ +.+++.+||.|++++|+|+.|..+++..|++++.+|+ +++ ++|++.+++.++..+ +++++.+||||
T Consensus 151 ~~al~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~--g~~~~~l~~~~~~~~--k~i~~~p~p~N 223 (431)
T PRK15481 151 IDAIERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DAE--GMQPEKLERALAQGA--RAVILTPRAHN 223 (431)
T ss_pred HHHHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeecc-CCC--CCCHHHHHHHHhcCC--CEEEECCCCCC
Confidence 9999884 4556789999999999999999999999999999998 553 589999999886533 33455569999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc-CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 232 PTGVDPTLQQWERIRQLMRSK-GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~-~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
|||.+++.+++++|+++|+++ +++||+||+|.+|.+++ . ... +....+++|+++||||.|+ +|+|+||++
T Consensus 224 PTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~--~-~~~---~~~~~~~vi~~~SfSK~~~-~GlRiG~~i-- 294 (431)
T PRK15481 224 PTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP--Y-HSV---IPQTTQRWALIRSVSKALG-PDLRLAFVA-- 294 (431)
T ss_pred CCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC--C-CCC---CcCCCCCEEEEeeeccccC-CCceeEEEe--
Confidence 999999999999999999999 99999999999998642 1 111 1113358999999999999 999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++++.........+++.+.|.++..+|++
T Consensus 295 ~~-----~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 328 (431)
T PRK15481 295 SD-----SATSARLRLRLNSGTQWVSHLLQDLVYACLTD 328 (431)
T ss_pred CC-----HHHHHHHHHHHhccccCCCHHHHHHHHHHHhC
Confidence 76 55666665554444456899999999999976
No 61
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=5.7e-37 Score=294.97 Aligned_cols=260 Identities=20% Similarity=0.239 Sum_probs=202.5
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecCCch
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN-RVTTVQCLSGT 152 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~G~~ 152 (350)
++|||+.|++....+.+.+...++++.+... .......|++..|.++||+++++++...+...+.++ +|++ ++|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAA-TSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHH-HHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhh-cccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 6899999999544344444445555544122 123457799999999999999999752223334466 8998 99988
Q ss_pred hHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC---CcEEEEecC
Q 018820 153 GSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA---GAIVLLHAC 228 (350)
Q Consensus 153 ~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~l~~~~ 228 (350)
+++.++. ... ..+||+|++++|+|+.|..+++..|++++++++..++++.+|++.+++.+++.+. +..++++++
T Consensus 79 ~~~~~~~--~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 156 (363)
T PF00155_consen 79 AALFLLL--RLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICN 156 (363)
T ss_dssp HHHHHHH--HHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEES
T ss_pred cchhhhh--hcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecc
Confidence 8887743 333 5689999999999999999999999999999986566789999999999987421 235888999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+++.+++++|+++|++++++||+||+|.++.+++ .+..+.........++|+++||||.||++|+|+||++
T Consensus 157 p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~ 234 (363)
T PF00155_consen 157 PNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD--PDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV 234 (363)
T ss_dssp SBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS--SHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEE
T ss_pred cccccccccccccccchhhhhcccccceeeeeceeccccCC--CccCcccccccccccceeeeecccccccccccccccc
Confidence 99999999999999999999999999999999999999875 3333333444455579999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.++++++........ +.+.|.++..++++
T Consensus 235 --~~-----~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~ 266 (363)
T PF00155_consen 235 --AP-----PELIERLRRFQRSGLS--SSPMQAAAAAALSD 266 (363)
T ss_dssp --EE-----HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHH
T ss_pred --ch-----hhhhhhhhhccccccc--cchhhHHHHHhhhc
Confidence 75 5777777777765443 88888888888764
No 62
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.8e-36 Score=296.19 Aligned_cols=253 Identities=17% Similarity=0.170 Sum_probs=183.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND---RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~---~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
.++++|+|+.|++ +.. +.+.+.++......+ .....+|.|..|.++||+++|+++++.. +.+++|++
T Consensus 31 ~~~~~i~l~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~---~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDT-TQP----LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR---IDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCC-CCC----CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---CCHHHEEE--
Confidence 4578999999988 322 234444444443311 1123569999999999999999865543 34899999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCC-----------eEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGL-----------SVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
|+|+++++.++. ..+.+||.|++++|+|..|..+++..|+ +++.+++.+++++.+|++.
T Consensus 101 t~Ga~~al~~l~---~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------- 170 (402)
T TIGR03542 101 SDGAKCDVFRLQ---SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------- 170 (402)
T ss_pred CCCcHHHHHHHH---HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-------
Confidence 999999998742 3457899999999999999999999999 9999988223345555321
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
. .+..+++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++..+....+++|+++||||.
T Consensus 171 ~-~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~ 247 (402)
T TIGR03542 171 E-PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDP--SLPHSIFEIPGAKECAIEFRSFSKT 247 (402)
T ss_pred c-CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCC--CCCcchhhCCCCcccEEEEecCccc
Confidence 1 123377778999999999999999999999999999999999999998753 1112222222222579999999999
Q ss_pred cCccCcceeEEEEeeCChhHH----HHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 297 LGLYGERVGALSIVCKTADVA----GRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||+||+|+||++ ++. +.. +.+.+.+.......+.+++.+.|.++..+|++
T Consensus 248 ~g~pGlRiG~~i--~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 301 (402)
T TIGR03542 248 AGFTGVRLGWTV--VPK-ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAG 301 (402)
T ss_pred cCCCCcceEEEE--ecH-HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcC
Confidence 999999999988 762 221 11123332223334556888999988888764
No 63
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-36 Score=292.50 Aligned_cols=277 Identities=17% Similarity=0.220 Sum_probs=213.3
Q ss_pred cccCCCCCCCCccccchH---hhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTV---AYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNK 124 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~---~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ 124 (350)
+.+++.+.+++++..+.+ ++.. ..++.++|+.|.| +.. +.+.++++..+...+ . ...|++..|.++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~----~~~~~~~~~~~~~~~-~-~~~Y~~~~g~~~lr~ 75 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKA-QGRDVISLGAGEP-DFD----TPEHIKEAAIEALDD-G-KTKYTPAAGIPELRE 75 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHh-ccCCEEEeCCCCC-CCC----CCHHHHHHHHHHHhc-C-CCCcCCCCChHHHHH
Confidence 445666666777544333 3332 3567999999998 422 245666666655422 2 345999999999999
Q ss_pred HHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 125 LSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 125 aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
++++++.......+.+++|++ |+|+++++.++ +...+.+||.|++++|+|..|..+++..|++++.+++..++++.
T Consensus 76 ~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 76 AIAAKLKRDNGLDYDPSQVIV--TTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHhCCCCCHHHEEE--eCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 999996322111234789999 99999999874 34557899999999999999999999999999999983234578
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-hhc
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF-VAD 283 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~-~~~ 283 (350)
+|++.+++.++... .++++++||||||.+++.+++++|+++|++|++++|+||+|.+|.+++ ....+...+ .+.
T Consensus 152 ~d~~~l~~~l~~~~---~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~ 226 (393)
T PRK05764 152 LTVEQLEAAITPKT---KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDG--AEFTSIASLSPEL 226 (393)
T ss_pred CCHHHHHHhhCccc---eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCC--CCcccHHHcCCCC
Confidence 99999999886433 367789999999999999999999999999999999999999998753 111233333 223
Q ss_pred CCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
..++|+++||||.+|++|+|+||++ ++ +++++++.......+.+++.+.|.++..+|+
T Consensus 227 ~~~~i~~~s~SK~~~~~G~RiG~i~--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 284 (393)
T PRK05764 227 RDRTITVNGFSKAYAMTGWRLGYAA--GP-----KELIKAMSKLQSHSTSNPTSIAQYAAVAALN 284 (393)
T ss_pred cCCEEEEecCcccccCccceeEEEe--cC-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence 4589999999999999999999988 76 5677777777776777889999999888886
No 64
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=6.6e-36 Score=291.73 Aligned_cols=261 Identities=15% Similarity=0.118 Sum_probs=199.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
++.++|+|+.|.|...+ ..+.+.+.+++...... ....|++..|.++||+++++++.......+.+++|++ |+|
T Consensus 28 ~~~~~i~l~~g~p~~~~--~~p~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G 101 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFD--FQPPEHMKEAYCRAIKE--GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAA 101 (398)
T ss_pred cCCCeEEEeCCCCCcCC--CCCCHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 45689999999983111 22356666666655422 2346988999999999999996432222345899999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+++.+||.|++++|+|+.|...++..|.+++.++..+++++.+|++.+++.+...+ .++++++||
T Consensus 102 ~~~al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~---~~v~l~~p~ 176 (398)
T PRK08363 102 VTEALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT---KAIAVINPN 176 (398)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce---EEEEEECCC
Confidence 99999884 4455789999999999999999999999999988843366677899999998886533 367778999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ...+...+. ...++|+++||||.|+++|+|+||++
T Consensus 177 NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~-- 250 (398)
T PRK08363 177 NPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSLT-KDVPVIVMNGLSKVYFATGWRLGYIY-- 250 (398)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHcC-cCCcEEEEecchhccCCccceEEEEE--
Confidence 999999999999999999999999999999999988753 112233332 23479999999999999999999988
Q ss_pred e-CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 C-KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ++++.++.+.+.+....... .+++.+.|.++..+|.+
T Consensus 251 ~~~~~~~~~~l~~~~~~~~~~~-~~~s~~~q~~~~~~l~~ 289 (398)
T PRK08363 251 FVDPEGKLAEVREAIDKLARIR-LCPNTPAQFAAIAGLTG 289 (398)
T ss_pred EeCcHHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHhC
Confidence 6 34445555665554433222 36788899988888863
No 65
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.5e-36 Score=291.32 Aligned_cols=261 Identities=16% Similarity=0.138 Sum_probs=195.6
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+.++++..+.+++..+.....+ ...++++|+.|.| +. +..+.++++..... . ..+|++..|.++||++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~p-~~----~~~~~~~~~~~~~~--~--~~~Y~~~~G~~~lr~~ia 72 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAA-HPDGIVDLSVGTP-VD----PVPPVIQEALAAAA--D--APGYPTTAGTPELREAIV 72 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHh-cCCCEEEcCCCCC-CC----CCCHHHHHHHHHHH--h--hCCCCCccCCHHHHHHHH
Confidence 4466777776666555444444 3456899999988 32 22466677666544 1 246999999999999999
Q ss_pred HHHhCCCCCC-ccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 128 KLILGADSPA-IRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 128 ~~~~g~~~~~-~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+|+....... +.+++|++ |+|+++++.++. ..+ +.+||.|++++|+|+.|...++..|++++.++.
T Consensus 73 ~~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------- 140 (364)
T PRK07865 73 GWLARRRGVTGLDPAAVLP--VIGSKELVAWLP--TLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------- 140 (364)
T ss_pred HHHHHHcCCCCCCcccEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC--------
Confidence 9964321111 34889999 999999998843 333 579999999999999999999999999887742
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh----
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV---- 281 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~---- 281 (350)
++.+.+ .+..+++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ . ....+.
T Consensus 141 -~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~---~~~~~~~~~~ 208 (364)
T PRK07865 141 -LTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA--E---PVSILDPRVC 208 (364)
T ss_pred -hhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC--C---CCcccccccc
Confidence 122211 123367778999999999999999999999999999999999999998753 1 111121
Q ss_pred -hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 282 -ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 282 -~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
...+++|+++||||.||++|+|+||++ ++ +++++++.........+++.+.|.++..+|.+
T Consensus 209 ~~~~~~~i~~~S~SK~~~~~GlRiG~i~--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 270 (364)
T PRK07865 209 GGDHTGLLAVHSLSKQSNLAGYRAGFVA--GD-----PALVAELLEVRKHAGMMVPAPVQAAMVAALGD 270 (364)
T ss_pred CCccceEEEEeechhccCCCceeeEEEe--cC-----HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC
Confidence 123589999999999999999999987 76 56666666666555567888999999988865
No 66
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-36 Score=274.93 Aligned_cols=276 Identities=15% Similarity=0.160 Sum_probs=218.5
Q ss_pred CccccchHhhcc----CCCCCeEEeecccccCCCCCccccHHHHHH-HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhC
Q 018820 58 DPILGVTVAYNK----DPSPVKLNLGVGAYRTEEGKPLVLNVVRKA-EQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILG 132 (350)
Q Consensus 58 ~~i~~~~~~~~~----~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a-~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g 132 (350)
.+|..+...+.. +....+|.|+.|.|. -.+.....+...+| .+.+. .+....|+|..|.+.-|+|+|+|+++
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPs-v~~~~~ts~~a~~Av~~al~--Sgk~N~Yaps~G~~~AR~AVAeYl~~ 118 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPS-VYPCFRTSQEAEQAVVDALR--SGKGNGYAPSVGILPARRAVAEYLNR 118 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCC-ccccccCCHHHHHHHHHHHh--cCCCCCcCCccccHHHHHHHHHHhhc
Confidence 345555544432 123367999999994 33333333443444 44444 44557799999999999999999777
Q ss_pred CCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHH
Q 018820 133 ADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 133 ~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 212 (350)
.-...+++++|++ |.|.++|+.++ +.++.+||..|++|.|+|+-|...+...|+++++|.+..+++|.+|+++++.
T Consensus 119 ~l~~kl~a~DV~l--tsGC~qAIe~~--i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~vea 194 (447)
T KOG0259|consen 119 DLPNKLTADDVVL--TSGCSQAIELA--ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEA 194 (447)
T ss_pred CCCCccCcCceEE--eccchHHHHHH--HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHH
Confidence 6555688999999 99999999994 4555789999999999999999999999999999999888889999999999
Q ss_pred HhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 213 DLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 213 ~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
.+.+++. ++++.|||||+|.+++.+-+++|++.|+++++.||.||+|..++|++ ....++..|... -.||.++|
T Consensus 195 l~DENT~---AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fssi-VPVitlgg 268 (447)
T KOG0259|consen 195 LADENTV---AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFSSI-VPVITLGG 268 (447)
T ss_pred hhccCee---EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhcccc-CceEeecc
Confidence 9987765 88889999999999999999999999999999999999999999987 444556566432 47999999
Q ss_pred cccccCccCcceeEEEEeeCChhH-H--HHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 293 YAKNLGLYGERVGALSIVCKTADV-A--GRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 293 ~SK~~gl~G~RvG~l~~v~~~~~~-~--~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.||.|=.||||+||++ ..|+.- + ..+++.+++... ....|+++.|.++-.||+.
T Consensus 269 isKrW~VPGWRlGWi~--~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 269 ISKRWIVPGWRLGWIA--LHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEK 325 (447)
T ss_pred cccccccCCceeeeEE--EecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHh
Confidence 9999999999999998 776551 1 123344444443 3467899999999999874
No 67
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=289.90 Aligned_cols=253 Identities=18% Similarity=0.187 Sum_probs=194.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+.++++|+.|.+ +.. +.+.+.++..... . ....|.+..|.++||+++++++.. ....+.+++|++ |+|+
T Consensus 29 ~~~~i~l~~~~~-~~~----~~~~~~~a~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~i~~--t~G~ 97 (397)
T PRK07568 29 GIKVYHLNIGQP-DIK----TPEVFFEAIKNYD--E-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDEILI--TNGG 97 (397)
T ss_pred CCCEEEecCCCC-CCC----CCHHHHHHHHHHh--c-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCcceEEE--cCCh
Confidence 457999999998 322 2456666665544 2 246799999999999999999652 222345889999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC-CCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG-LNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~-~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
++++.+++ ..++.+||+|++++|+|.+|..+++..|++++.+++..++++. .+++.+++.+...++ ++++++||
T Consensus 98 ~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~---~v~i~~p~ 172 (397)
T PRK07568 98 SEAILFAM--MAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTK---AILISNPG 172 (397)
T ss_pred HHHHHHHH--HHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccce---EEEEECCC
Confidence 99998854 4457899999999999999999999999999999983233444 357888888765433 77888999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++++++|+||+|.+|.+++ ....+...+....+++|+++||||.||++|+|+||++
T Consensus 173 NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~-- 248 (397)
T PRK07568 173 NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG--LKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI-- 248 (397)
T ss_pred CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCC--CCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe--
Confidence 999999999999999999999999999999999998764 2223333333224689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++..+++ .+.... ..+++.+.|.++..+|++
T Consensus 249 ~~~~~~~~~~----~~~~~~-~~~~s~~~q~~~~~~l~~ 282 (397)
T PRK07568 249 SKNKELIAAA----MKLCQA-RLSPPTLEQIGAAALLDT 282 (397)
T ss_pred cCCHHHHHHH----HHHhhc-cCCCCcHHHHHHHHHhhC
Confidence 8765444433 333222 246788999999998864
No 68
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-36 Score=300.88 Aligned_cols=245 Identities=13% Similarity=0.096 Sum_probs=182.7
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhC----CCCCCccCCcEEEEecC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILG----ADSPAIRENRVTTVQCL 149 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g----~~~~~~~~~~v~~~~t~ 149 (350)
+.|+|++|.| +.+. .+.+.++.+.+. . ..|+++.|.++||++++++... ....+..+++|++ |+
T Consensus 101 ~~i~l~~g~p-~~~~----~~~v~e~~~~~~--~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~ 168 (527)
T PRK09275 101 DAVSYVRDQL-GFDA----DEFVYELVDGII--G---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VE 168 (527)
T ss_pred HHHhhcCCCC-CCCC----CHHHHHHHHHHh--c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 4699999999 6543 444555555554 1 2499999999999999995332 1112111358998 99
Q ss_pred CchhHHHHHHHHH---HHhcCCCEEEEcCCCCCChHHHHHHcCCe--EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 150 SGTGSLRVGAEFL---ARHYHQRTIYIPQPTWGNHPKVFTLAGLS--VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 150 G~~~al~l~~~l~---~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~--~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|+++++..+...+ .++.|||+|++++|+|+.|..+++..|.. +++++...+++|.+|.+.+++.+..+++ ++
T Consensus 169 Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk---ai 245 (527)
T PRK09275 169 GGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK---AL 245 (527)
T ss_pred CHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC---EE
Confidence 9999998743221 25789999999999999999998877654 4555542234699999999987765444 77
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHh--cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRS--KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
+++|||||||.+++.+++++|+++|++ +|++||+||+|.+|.+.. .++.. ...+++|+++||||.||++||
T Consensus 246 ~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~-----~s~~~--~~~~~~I~v~SfSK~f~mtG~ 318 (527)
T PRK09275 246 FLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDF-----RSLFA--VLPYNTILVYSFSKYFGATGW 318 (527)
T ss_pred EEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccc-----cCHHH--hCCCCEEEEeehhhhccCcHh
Confidence 888999999999999999999999965 599999999999997521 12211 133689999999999999999
Q ss_pred ceeEEEEeeCChhHHHHHHHHH--------------------------------HHhhcccccCCChhHHHH
Q 018820 303 RVGALSIVCKTADVAGRVESQV--------------------------------KLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 303 RvG~l~~v~~~~~~~~~~~~~l--------------------------------~~~~~~~~~~~~~~~q~i 342 (350)
|+||++ ++.....+++++.+ .+++....++++++.|..
T Consensus 319 RlG~i~--~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a 388 (527)
T PRK09275 319 RLGVIA--LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQ 388 (527)
T ss_pred HHhhhh--cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHH
Confidence 999988 87654444443333 566666778888888875
No 69
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-36 Score=288.50 Aligned_cols=248 Identities=17% Similarity=0.192 Sum_probs=187.5
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCC--CCCccCCcEEEEecCC
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD--SPAIRENRVTTVQCLS 150 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~--~~~~~~~~v~~~~t~G 150 (350)
+..++|+.|++ +.. +.+.+.+++............| |..|.++||+++|+|+.... ...+.+++|++ |+|
T Consensus 28 ~~~~~l~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEF-PYD----LPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCC-CCC----CCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35899999998 322 2344455544433111112458 55799999999999964321 12245899999 999
Q ss_pred chhHHHHHHHHHHHhcCCC-EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-CCCcEEEEecC
Q 018820 151 GTGSLRVGAEFLARHYHQR-TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-PAGAIVLLHAC 228 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~l~~~~ 228 (350)
+++++.++ +++.+.+|| .|++++|+|+.|..+++..|++++.+++ +++++++|++.+++.++.. ..+..+++++|
T Consensus 100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99999863 345566775 8999999999999999999999999998 6666899999999988641 11234777889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+++.+++++|+++| ++++||+||+|.+|.+. ..+..+. ...++|+++||||.||++|+|+||++
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~------~~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT------TLVGELA-QHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc------chHHHHh-cCCCEEEEEecchhccCcccceeeee
Confidence 999999999999999999986 49999999999999642 1222232 34579999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++++.+.+... ..+++.+.|.++..+|++
T Consensus 248 --~~-----~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~~ 279 (374)
T PRK02610 248 --GH-----PELIAVLEKVRL--PYNLPSFSQLAAQLALEH 279 (374)
T ss_pred --cC-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcC
Confidence 76 566666666542 245788999999888865
No 70
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.5e-36 Score=288.26 Aligned_cols=240 Identities=13% Similarity=0.107 Sum_probs=187.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++|+|+.|++ +.. +.+.+.++...... . . ..| |..|.++||+++++++ +. .+++|++ |+|+
T Consensus 28 ~~~~i~l~~nen-~~~----~~~~v~~a~~~~~~-~-~-~~Y-p~~g~~~Lr~aia~~~-~~-----~~~~I~v--t~Gs 90 (366)
T PRK01533 28 DHSFVKLASNEN-PFG----CSPRVLDELQKSWL-D-H-ALY-PDGGATTLRQTIANKL-HV-----KMEQVLC--GSGL 90 (366)
T ss_pred CCceEEeCCCCC-CCC----CCHHHHHHHHHHHH-h-c-CcC-CCCCHHHHHHHHHHHh-CC-----CcceEEE--CCCH
Confidence 457899999998 322 23344444443321 1 1 236 6789999999999996 43 2789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+|+ + ++++|++.+++.+.+.++ +++++||||
T Consensus 91 ~e~i~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~--~~~~d~~~l~~~~~~~~~---~v~i~~P~N 162 (366)
T PRK01533 91 DEVIQII--SRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVAL-N--NGVYDLDEISSVVDNDTK---IVWICNPNN 162 (366)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeec-C--CCCcCHHHHHHHhCcCCc---EEEEeCCCC
Confidence 9999884 4455789999999999999999999999999999998 4 357999999998865443 778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+++++ +|+||+|.+|.+++ ....... .....+++|+++||||.||++|+|+||++ +
T Consensus 163 PTG~~~~~~~l~~l~~~~~~~~~-~iiDe~y~~~~~~~--~~~~~~~-~~~~~~~vi~~~SfSK~~~l~GlRiG~~i--~ 236 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISENTL-IVIDEAYYEYVTAK--DFPETLP-LLEKHKNILVLRTFSKAYGLASFRVGYAV--G 236 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCCCCE-EEEEccHHHhhccc--cCcchhH-HhccCCCEEEEeCchHHhcChHHHHhHHh--C
Confidence 99999999999999999988775 56699999988652 1112222 22344689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +.+++++.+... ..+++.++|.++..+|++
T Consensus 237 ~-----~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~~ 267 (366)
T PRK01533 237 H-----EELIEKLNVVRL--PFNVSSLAQKAATIAFGD 267 (366)
T ss_pred C-----HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCC
Confidence 6 566776766543 357899999999999875
No 71
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-35 Score=284.15 Aligned_cols=258 Identities=16% Similarity=0.216 Sum_probs=198.6
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+++++|+.|.| + ..+.+.+.++...+.+.. .....|.+..|.++||+++++++.......+.+++|++ |+|
T Consensus 32 ~~~~~~l~~g~p-~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNP-S----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCG 104 (394)
T ss_pred CCCeEEecCcCC-C----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCC
Confidence 356899999987 3 223566777666654221 12467999999999999999996433222345899999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +..++.+||.|++++|+|..|..+++..|++++.++. +++++++|++.+++.+..+++ ++++++||
T Consensus 105 ~~~al~~~--~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~~~~~~~---~v~~~~p~ 178 (394)
T PRK06836 105 AAGALNVA--LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPT-DTDTFQPDLDALEAAITPKTK---AVIINSPN 178 (394)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEec-CCccCcCCHHHHHhhcCcCce---EEEEeCCC
Confidence 99999884 3455789999999999999999999999999999998 666678999999998865433 67788999
Q ss_pred CCCCCCCCHHHHHHHHHHHHh------cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 231 NPTGVDPTLQQWERIRQLMRS------KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~------~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
||||.+++.+++++|+++|++ ||++||+||+|.+|.+++ ..... +....+++|+++||||.||+||+|+
T Consensus 179 NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~--~~~~~---~~~~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 179 NPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG--AEVPY---IFKYYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC--CCCCC---hHHccCcEEEEecchhhccCcceee
Confidence 999999999999999999999 899999999999998753 12122 1223458999999999999999999
Q ss_pred eEEEEeeCChh-HHHHHHHHHHHhhcc-cccCCChhHHHHHHHHhcC
Q 018820 305 GALSIVCKTAD-VAGRVESQVKLVIRP-MYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 305 G~l~~v~~~~~-~~~~~~~~l~~~~~~-~~~~~~~~~q~i~~~~L~~ 349 (350)
||++ +++.. ....++..+....+. .+.+++.+.|.++..++++
T Consensus 254 G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 298 (394)
T PRK06836 254 GYIA--VNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA 298 (394)
T ss_pred EEEe--cCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC
Confidence 9988 65321 112233333333332 2356888899999999875
No 72
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.1e-34 Score=279.06 Aligned_cols=250 Identities=13% Similarity=0.137 Sum_probs=186.4
Q ss_pred chHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCc
Q 018820 63 VTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENR 142 (350)
Q Consensus 63 ~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~ 142 (350)
+.+++.. ..++.++|+.|.+. . ++ .+.+.+++.... .. ...|++ .|.++||+++++|+ + +.+++
T Consensus 10 ~~~~~~~-~~~~~~~l~~~~~~-~-~~---p~~~~~a~~~~~--~~-~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~~ 73 (354)
T PRK06358 10 IAREKGL-TKNMILDFSANINP-L-GV---PESLKQAITENL--DK-LVEYPD-PDYLELRKRIASFE-Q-----LDLEN 73 (354)
T ss_pred HHHHhCC-CccceEEecCCCCC-C-CC---CHHHHHHHHHHH--Hh-hhcCCC-ccHHHHHHHHHHHh-C-----CChhh
Confidence 3444433 23468999999872 2 22 345555555443 12 345854 57899999999996 3 23889
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
|++ |+|+++++.++. .+ +.+ +.|++++|+|+.|...++..|++++.+++..++++.+| +.+++.+..+++
T Consensus 74 i~i--t~Ga~~~l~~~~--~~-~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~--- 143 (354)
T PRK06358 74 VIL--GNGATELIFNIV--KV-TKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEID--- 143 (354)
T ss_pred EEE--CCCHHHHHHHHH--HH-hCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCC---
Confidence 999 999999998853 33 344 68999999999999999999999999998334457888 666666644333
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
+++++|||||||.+++.+++++|+++|+++++++|+||+|.+|.+++ .. .+........+++|+++||||.||++|+
T Consensus 144 ~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~-~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 220 (354)
T PRK06358 144 LVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN--ET-ISMINYLENFKNLIIIRAFTKFFAIPGL 220 (354)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc--cc-hhHHHhccCCCCEEEEEechhhccCcch
Confidence 66778999999999999999999999999999999999999999764 11 2222222344689999999999999999
Q ss_pred ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 303 RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 303 RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+||++ ++++ .++..+..+.. ..+++.+.|.++..+|++
T Consensus 221 RiG~lv--~~~~----~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 259 (354)
T PRK06358 221 RLGYGL--TSNK----NLAEKLLQMRE--PWSINTFADLAGQTLLDD 259 (354)
T ss_pred hheeee--cCCH----HHHHHHHHhCC--CCcchHHHHHHHHHHhcc
Confidence 999988 7654 34445555443 346788899999988864
No 73
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=278.35 Aligned_cols=247 Identities=17% Similarity=0.170 Sum_probs=185.7
Q ss_pred chHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCc
Q 018820 63 VTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENR 142 (350)
Q Consensus 63 ~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~ 142 (350)
+..++.. ...++|+|++|.+ +.. + .+.+.+++.... .. ...|+ ..|.++||+++++++ + +.+++
T Consensus 21 ~~~~~~~-~~~~~i~l~~~~~-~~~-~---~~~~~~~~~~~~--~~-~~~Y~-~~~~~~lr~~ia~~~-~-----~~~~~ 84 (357)
T PRK14809 21 VARELGL-DPDDLVKLSSNEN-PHG-P---SPAAVEAIREAA--ER-VHSYP-KASHADLTAALADRW-D-----VSPEQ 84 (357)
T ss_pred HHHHhCC-CccceeEecCCCC-CCC-C---CHHHHHHHHHHH--hh-hhcCC-CCCHHHHHHHHHHHh-C-----CCcce
Confidence 3344433 3567999999988 322 2 233344444333 11 35685 578999999999986 3 23789
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
|++ |+|+++++.++ +.+++.+||.|++++|+|+.|....+..|.+++.+++..++++.+|.+.+.+... .+ .
T Consensus 85 I~i--t~G~~~al~~~--~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~~---k 156 (357)
T PRK14809 85 VWL--ANGGDGALDYL--ARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-GE---R 156 (357)
T ss_pred EEE--CCCHHHHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-CC---c
Confidence 999 99999999884 3455789999999999999999988999999999998333457778777766542 22 3
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
+++++|||||||.+++.+++++|+++|++ +++||+||+|.+|.++. .... .....+++|+++||||.||++|+
T Consensus 157 ~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~-~~~~~~~vi~~~SfSK~~~~~Gl 229 (357)
T PRK14809 157 IVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAVA-LVEERDDVAVLRTFSKAYGLAGL 229 (357)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhHH-HHhhCCCEEEEecchhHhcCcch
Confidence 67778999999999999999999999975 78999999999998642 1222 22344689999999999999999
Q ss_pred ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 303 RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 303 RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+||++ ++ +++++.+.+... ..+++.++|.++..+|.+
T Consensus 230 RiG~~~--~~-----~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~~ 267 (357)
T PRK14809 230 RLGYAV--VP-----EEWADAYARVNT--PFAASELACRAGLAALDD 267 (357)
T ss_pred hheeee--cC-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhCC
Confidence 999988 77 556666666543 345788888888888764
No 74
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.2e-35 Score=286.41 Aligned_cols=249 Identities=17% Similarity=0.145 Sum_probs=184.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC---CCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCCcEEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR---SRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRENRVTT 145 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~---~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~~v~~ 145 (350)
.+++|+|+.|.| +.. +.+.+.++++........ .....|++..|.++||+++|+|+. |.+ +.+++|++
T Consensus 29 ~~~~i~l~~g~p-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~---v~~~~I~i 102 (416)
T PRK09440 29 TPGAIMLGGGNP-AHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWN---ISPQNIAL 102 (416)
T ss_pred CCCceeccCCCC-Ccc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCC---CChhhEEE
Confidence 467899999998 322 344567777776655221 123569999999999999999963 443 44899999
Q ss_pred EecCCchhHHHHHHHHHHHhc-----CCCEEEE-cCCCCCChHHHHHHcCC----eEEEEEeecCC--CCCCCHHHHHHH
Q 018820 146 VQCLSGTGSLRVGAEFLARHY-----HQRTIYI-PQPTWGNHPKVFTLAGL----SVKSYRYYDPA--TRGLNFQGLLED 213 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~-----~gd~Vlv-~~P~y~~~~~~~~~~G~----~~~~v~~~~~~--~~~~d~~~l~~~ 213 (350)
|+|+++++.++.. .++. +||.|++ ++|+|+.|.......|. .+..+++ +.+ .+++|++.++
T Consensus 103 --t~Ga~~al~~~~~--~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~-- 175 (416)
T PRK09440 103 --TNGSQSAFFYLFN--LFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH-- 175 (416)
T ss_pred --ccChHHHHHHHHH--HHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--
Confidence 9999999988543 3343 5899999 79999999886654332 2222333 333 3678988886
Q ss_pred hhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecc
Q 018820 214 LGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY 293 (350)
Q Consensus 214 l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 293 (350)
+.. +..+++++|||||||.+++.+++++|+++|+++|++||+||+|..+.... ..........+++|+++||
T Consensus 176 ~~~---~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-----~~~~~~~~~~~~vI~~~Sf 247 (416)
T PRK09440 176 IDE---DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-----IFSEATPLWNPNIILCMSL 247 (416)
T ss_pred cCC---CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-----chhhcCccccCCeEEEecc
Confidence 222 23488899999999999999999999999999999999999998654321 0000000113589999999
Q ss_pred ccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 294 AKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 294 SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||. ++||+|+||++ ++ +.+++++.........+++.++|.++..+|++
T Consensus 248 SK~-~~pGlRiG~~i--~~-----~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 295 (416)
T PRK09440 248 SKL-GLPGVRCGIVI--AD-----EEIIEALSNMNGIISLAPGRLGPAIAAEMIES 295 (416)
T ss_pred ccc-CCCcceEEEEe--CC-----HHHHHHHHHHHHHhccCCCcHHHHHHHHHhcc
Confidence 995 89999999988 76 56777777766655567899999999999875
No 75
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.1e-34 Score=277.28 Aligned_cols=250 Identities=16% Similarity=0.136 Sum_probs=187.6
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCC-
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPA- 137 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~- 137 (350)
+++....+.++ ..+++++|+.|+| +. + ..+.+.+++.... . ...|++..|.++||+++++++.......
T Consensus 8 ~~~~~~~~~~~-~~~~~i~l~~~~p-~~---~-~~~~~~~~~~~~~--~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~ 77 (357)
T TIGR03539 8 SLAPYKAKAAS-HPDGIVDLSVGTP-VD---P-VPPLIRAALAAAA--D--APGYPQTWGTPELREAIVDWLERRRGVPG 77 (357)
T ss_pred HHHHHHHHhhh-CCCCeEEccCCCC-CC---C-CCHHHHHHHHHHH--h--hCCCCcccCCHHHHHHHHHHHHHhcCCCC
Confidence 34444555554 4567899999988 32 2 2456666666544 1 3569999999999999999964321111
Q ss_pred ccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 138 IRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++|++ |+|+++++.++. ..+ ..+||.|++++|+|+.|...++..|++++.++ |++.+. ..
T Consensus 78 ~~~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~ 141 (357)
T TIGR03539 78 LDPTAVLP--VIGTKELVAWLP--TLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PV 141 (357)
T ss_pred CCcCeEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---cc
Confidence 44899999 999999998743 333 57999999999999999999999999887763 122221 11
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-----hcCCcEEEEe
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV-----ADGGECFIAQ 291 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~-----~~~~~vi~~~ 291 (350)
+..++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ . ....+. ....++|+++
T Consensus 142 ---~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~---~~~~~~~~~~~~~~~~vi~~~ 213 (357)
T TIGR03539 142 ---GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEG--R---PVSILDPRVCGGDHTGLLAVH 213 (357)
T ss_pred ---CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCC--C---CccceecccCCCccccEEEEe
Confidence 23377788999999999999999999999999999999999999988763 1 111121 1234799999
Q ss_pred ccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 292 SYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
||||.|+++|+|+||++ ++ +.++.++.+.......+++.+.|.++..+|++
T Consensus 214 S~SK~~~~~G~R~G~~i--~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 264 (357)
T TIGR03539 214 SLSKRSNLAGYRAGFVA--GD-----PALVAELLTVRKHAGLMVPAPVQAAMVAALGD 264 (357)
T ss_pred ccccccCCCceeEEEEe--cC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC
Confidence 99999999999999988 76 55666666665555567888999999888865
No 76
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.8e-34 Score=286.87 Aligned_cols=219 Identities=12% Similarity=0.092 Sum_probs=163.0
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCC--CCCccCC--cEEEEecC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGAD--SPAIREN--RVTTVQCL 149 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~--~~~~~~~--~v~~~~t~ 149 (350)
+.|+|++|.| +.+ +.+.+.++.+.+. .. .|+++.|..++|+++++..++.. .....++ +|++ |+
T Consensus 95 ~~i~l~~g~p-~~~----~~~~~~~~~~~~~---~~--~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~ 162 (521)
T TIGR03801 95 DIISYVIDQL-GFD----PDAFLYEMCDGII---GD--NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VE 162 (521)
T ss_pred HHHhhcCCCC-CCC----CCHHHHHHHHHhh---cC--CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 4699999999 543 2455666555543 11 48777888888888775422211 1111134 8988 99
Q ss_pred CchhHHHHHHHHH---HHhcCCCEEEEcCCCCCChHHHHHHc--CCeEEEEEeecCCC-----CCCCHHHHHHHhhcCCC
Q 018820 150 SGTGSLRVGAEFL---ARHYHQRTIYIPQPTWGNHPKVFTLA--GLSVKSYRYYDPAT-----RGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 150 G~~~al~l~~~l~---~~~~~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~~d~~~l~~~l~~~~~ 219 (350)
|+++|+.++...+ .++.|||+|++++|+|++|..+++.. |++++.++...+++ |.+|.+.+++.+..+++
T Consensus 163 Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k 242 (521)
T TIGR03801 163 GGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK 242 (521)
T ss_pred CHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCc
Confidence 9999998743221 15789999999999999999998765 67788887722222 88999999887654443
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
+++++|||||||.+++.+++++|+++|++| +++||+||+|.+|.+.. .++.. ...+++|+++||||.|
T Consensus 243 ---ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~-----~sl~~--~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 243 ---ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDF-----RSLFA--ELPYNTIGVYSFSKYF 312 (521)
T ss_pred ---EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccc-----cchhh--hCCCCEEEEEcchhhc
Confidence 778889999999999999999999999986 99999999999998521 12212 2335899999999999
Q ss_pred CccCcceeEEEEeeCChhH
Q 018820 298 GLYGERVGALSIVCKTADV 316 (350)
Q Consensus 298 gl~G~RvG~l~~v~~~~~~ 316 (350)
|++|||+||++ ++....
T Consensus 313 g~~G~RlG~i~--~~~~~v 329 (521)
T TIGR03801 313 GATGWRLGTIA--LHKDNI 329 (521)
T ss_pred cCchhhhhhhh--cCchHH
Confidence 99999999988 775433
No 77
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-34 Score=276.41 Aligned_cols=246 Identities=16% Similarity=0.144 Sum_probs=185.9
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
..|+|+.|++ +.. +.+.+.+++...... ......| |..|.++||+++++|+.......+.+++|++ |+|++
T Consensus 27 ~~i~l~~~~~-~~~----~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNEN-PYP----PSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCC-CCC----CCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 5799999998 332 244455554443211 1123568 5568999999999996433222345899999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++ +.+++.+||.|++++|+|+.|...++..|.+++.++. + +++++|++.+++.+...+. .+++++|||||
T Consensus 99 ~~l~~~--~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~~~~~~~--~~i~l~~p~NP 172 (368)
T PRK03317 99 EILQQL--LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR-A-ADFTLDVDAAVAAIAEHRP--DVVFLTSPNNP 172 (368)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc-C-CCCCCCHHHHHHHHhccCC--CEEEEeCCCCC
Confidence 999884 4455789999999999999999999999999998876 3 3578999999998864322 26677899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++++|+++| ++++|+||+|.+|.+++ ..... .+.....++|+++||||.||++|+|+||++ ++
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~--~~ 243 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TPSAL-TLLPEYPRLVVSRTMSKAFAFAGGRLGYLA--AA 243 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---CcCHH-HHHHhCCCEEEEEechhhhccchhhhhhhh--CC
Confidence 99999999999998887 68999999999997643 11222 222334589999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++.+..... ..+++.++|.++..+|++
T Consensus 244 -----~~~~~~l~~~~~--~~~~s~~~~~a~~~~l~~ 273 (368)
T PRK03317 244 -----PAVVDALRLVRL--PYHLSAVTQAAARAALRH 273 (368)
T ss_pred -----HHHHHHHHhcCC--CCCCCHHHHHHHHHHhhC
Confidence 556666665443 346788999988888764
No 78
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-34 Score=276.50 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=188.4
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
+++|+|+.|.+ . .++ .+.+.++..... .. ..|.|..|.++||+++++++ +. .+++|++ |+|++
T Consensus 29 ~~~i~l~~n~~-~-~~~---~~~v~~a~~~~~--~~--~~~~p~~g~~~lr~~ia~~~-~~-----~~~~i~~--t~G~~ 91 (359)
T PRK03158 29 EKIVKLASNEN-P-YGP---SPKVKEAIAAHL--DE--LALYPDGYAPELRTKVAKHL-GV-----DEEQLLF--GAGLD 91 (359)
T ss_pred CceEEecCCCC-C-CCC---CHHHHHHHHHHH--HH--hhcCCCCcHHHHHHHHHHHh-CC-----CHHHEEE--CCCHH
Confidence 37899999988 3 222 455666665544 11 34667889999999999996 32 2689999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.+++ .+++.+||.|++++|+|+.|...++..|++++.+|+ + ++++|++.+++.+..+++ ++++++||||
T Consensus 92 ~~l~~~~--~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~--~~~~d~~~l~~~~~~~~~---~v~i~~p~NP 163 (359)
T PRK03158 92 EVIQMIS--RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPL-K--DGGHDLEAMLKAIDEQTK---IVWICNPNNP 163 (359)
T ss_pred HHHHHHH--HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEec-C--CCCcCHHHHHHhcCCCCC---EEEEeCCCCC
Confidence 9998743 445789999999999999999999999999999998 4 367899999988765433 6777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++.++++.|+ +|+++|+||+|.+|.+++ ........ ....+++|+++||||.||++|+|+||++ ++
T Consensus 164 tG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~--~~~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~v--~~ 237 (359)
T PRK03158 164 TGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAE--DYPDTLPL-LEKYENLIVLRTFSKAYGLAALRVGYGI--AS 237 (359)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCc--ccccHHHH-HHhcCCEEEEEechHhhcCcchhhehhc--CC
Confidence 999999999999998874 699999999999998753 11112222 2344689999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++++...... .+++.++|.++..+|++
T Consensus 238 -----~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~ 267 (359)
T PRK03158 238 -----EELIEKLNIARPP--FNTTRIAQYAAIAALED 267 (359)
T ss_pred -----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC
Confidence 5666666665542 46899999999999875
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-34 Score=277.05 Aligned_cols=243 Identities=21% Similarity=0.248 Sum_probs=187.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.+++|+|+.|.+. . ++ .+.+++++.... .. ...|++..| .+||+++++++ +. .+++|++ |+|+
T Consensus 35 ~~~~i~l~~~~~~-~-~~---~~~~~~al~~~~--~~-~~~Y~~~~g-~~lr~~ia~~~-~~-----~~~~i~~--t~G~ 97 (371)
T PRK05166 35 VPRIAKLGSNENP-L-GP---SPAVRRAFADIA--EL-LRLYPDPQG-RALREAIAART-GV-----PADRIIL--GNGS 97 (371)
T ss_pred CcceEEcCCCCCC-C-CC---CHHHHHHHHHHH--HH-hhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHEEE--cCCH
Confidence 4579999999882 2 22 445666665543 12 356988888 49999999985 43 2789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. .+++.+||.|++++|+|+.|...++..|++++.+++ ++ ++++|++.+++.+..+++ +++++||||
T Consensus 98 ~~~l~~~~--~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~l~~~~~~~~~---~v~l~~p~N 170 (371)
T PRK05166 98 EDLIAVIC--RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTV-TP-DLGFDLDALCAAVARAPR---MLMFSNPSN 170 (371)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeec-CC-CCCCCHHHHHHhhhcCCC---EEEEeCCCC
Confidence 99998843 445789999999999999999999999999999998 44 368999999998876543 677899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|++ +++||+||+|.+|.+++ ........+.+...++|+++||||.||++|+|+||++ +
T Consensus 171 PtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i--~ 245 (371)
T PRK05166 171 PVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD--DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL--V 245 (371)
T ss_pred CCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc--CcccHHHHHhhcCCCEEEEeechHhhhcchhheeeee--c
Confidence 99999999999999999875 88999999999999653 1112222233334589999999999999999999977 6
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++++ +++.+.+... ..+++.+.|.++..+|.+
T Consensus 246 ~~~~----l~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 277 (371)
T PRK05166 246 SDPE----LVGLLDRVRT--PFNVNGAAQAAALAALDD 277 (371)
T ss_pred CCHH----HHHHHHHhcc--CCCCCHHHHHHHHHHhcC
Confidence 6543 4444444332 345788898887777654
No 80
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=4.4e-34 Score=276.33 Aligned_cols=236 Identities=18% Similarity=0.178 Sum_probs=181.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.++.++|+.|++ +.. + .+.+.+++...... ...|++. +.++||++++++. |. .+++|++ |+|+
T Consensus 42 ~~~~i~l~~~~~-~~~---~-~~~~~~a~~~~~~~---~~~Y~~~-~~~~Lr~aia~~~-~v-----~~e~I~i--t~Gs 104 (370)
T PRK09105 42 AEGAVFLNANEC-PLG---P-SPAARDAAARSAAL---SGRYDLE-LEDDLRTLFAAQE-GL-----PADHVMA--YAGS 104 (370)
T ss_pred CCCcEEecCCCC-CCC---C-CHHHHHHHHHHHHH---hcCCCCc-hHHHHHHHHHHHh-Cc-----ChhhEEE--cCCh
Confidence 467899999987 322 2 33444444433311 1348655 4999999999984 43 2789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++ +.+++.+||+|++++|+|+.|...++..|++++.+|+ ++ ++.+|++.+++. ..+ ..+++++||||
T Consensus 105 ~~ai~~~--~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~-~~~---~~~v~l~nP~N 176 (370)
T PRK09105 105 SEPLNYA--VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPL-RA-DGAHDVKAMLAA-DPN---AGLIYICNPNN 176 (370)
T ss_pred HHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecC-CC-CCCCCHHHHHhc-CCC---CCEEEEeCCCC
Confidence 9999884 4455789999999999999999999999999999998 54 467899998875 222 33788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|++.+ ++++++|+||+|.+|... ++...+....+++|+++||||.||++|||+||++ +
T Consensus 177 PTG~~~~~~~l~~l~~~~-~~~~~lIvDEaY~~f~~~------~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v--~ 247 (370)
T PRK09105 177 PTGTVTPRADIEWLLANK-PAGSVLLVDEAYIHFSDA------PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAA--A 247 (370)
T ss_pred CCCcCcCHHHHHHHHHhC-CCCcEEEEECchHHhccC------cchHHHHhhCCCEEEEecccHhhcCCccceeeee--c
Confidence 999999999999999975 458999999999887532 1223333445789999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++.+... .+.+++.+.|.++..+|.+
T Consensus 248 ~-----~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~ 277 (370)
T PRK09105 248 R-----PDLLAKLARF---GHNPLPVPAAAAGLASLRD 277 (370)
T ss_pred C-----HHHHHHHHhc---CCCCcCHHHHHHHHHHHhC
Confidence 6 4566666554 2445888888888888765
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.4e-33 Score=269.83 Aligned_cols=249 Identities=16% Similarity=0.194 Sum_probs=181.3
Q ss_pred cchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCC
Q 018820 62 GVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIREN 141 (350)
Q Consensus 62 ~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~ 141 (350)
....++.. +..+.++|+.|++ +.. +.+.+.++..... .. ...|++ .+.++||+++|+++ +. .++
T Consensus 10 ~~~~~~~~-~~~~~i~l~~~~~-~~~----~p~~~~~a~~~~~--~~-~~~y~~-~~~~~lr~~ia~~~-~~-----~~~ 73 (356)
T PRK08056 10 EAATVLGI-SPDQLLDFSANIN-PLG----MPVSLKRAIIDNL--DC-AERYPD-VEYRHLHQALARHH-QV-----PAS 73 (356)
T ss_pred HHHHHhCC-ChhhEEEeccccC-CCC----CCHHHHHHHHHHH--Hh-cccCcC-ccHHHHHHHHHHHh-Cc-----Chh
Confidence 33444443 3456899999988 322 2344445444433 11 235754 57999999999985 43 278
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA 221 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 221 (350)
+|++ |+|+++++.++.. . +.+|+ +++++|+|..|..+++..|++++.+|+.+++++.+| +.+++.+..+++
T Consensus 74 ~i~i--t~Ga~~~l~~~~~--~-l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k-- 144 (356)
T PRK08056 74 WILA--GNGETESIFAVVS--G-LKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLD-- 144 (356)
T ss_pred hEEE--CCCHHHHHHHHHH--H-hCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCC--
Confidence 9999 9999999987543 2 36776 777899999999999999999999998334456666 345555543333
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
+++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++ . .....+ ...+++|+++||||.||++|
T Consensus 145 -~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~--~~~~~~-~~~~~~i~~~S~SK~~~~~G 218 (356)
T PRK08056 145 -CLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--T--GFIPQL-ADNPHLWVLRSLTKFYAIPG 218 (356)
T ss_pred -EEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--h--HHHHHh-ccCCCEEEEEechhhccCcc
Confidence 77789999999999999999999999999999999999999998643 1 112222 23468999999999999999
Q ss_pred cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 302 ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 302 ~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+||++ +++++ +++++++.. ...+++.++|.++..+|++
T Consensus 219 ~RiG~~v--~~~~~----~~~~l~~~~--~~~~~~~~~~~~a~~~l~~ 258 (356)
T PRK08056 219 LRLGYLV--NSDDA----AVARMRRQQ--MPWSINAFAALAGEVILQD 258 (356)
T ss_pred hhheeee--cCCHH----HHHHHHHhC--CCCchhHHHHHHHHHHhCC
Confidence 9999988 76543 344444433 2346777899888888764
No 82
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=269.89 Aligned_cols=234 Identities=18% Similarity=0.200 Sum_probs=180.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.++|+|+.|.+ +. .+.+.++++...... .....|++. |.++||+++|+++ +. .+++|++ |+|++
T Consensus 24 ~~~i~l~~~~~-~~----~~~~~~~~a~~~~~~--~~~~~y~~~-~~~~lr~aia~~~-~~-----~~~~I~i--t~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNEN-PY----PPSPKVLEAIRAALG--DDLRLYPDP-NADALRQAIAAYY-GL-----DPEQVFV--GNGSD 87 (353)
T ss_pred cceeeccCCCC-CC----CCCHHHHHHHHHHhh--hhhhcCCCC-cHHHHHHHHHHHh-CC-----CHHHEEE--cCCHH
Confidence 57899999998 32 124566666655441 123458544 6799999999996 32 3789999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++ +.+++.+||.|++++|+|++|...++..|++++.+|+ ++ ++++|++.+++ ..+ +++++|||||
T Consensus 88 ~al~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~----~~~---~v~~~~P~NP 156 (353)
T PRK05387 88 EVLAHA--FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL-DD-DFSIDVEDYLR----PNG---GIIFPNPNAP 156 (353)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec-CC-CCCCCHHHHHh----cCC---EEEEeCCCCC
Confidence 999984 4455789999999999999999999999999999998 54 47899988863 122 6788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++++|+++++ ++++|+||+|.+|... . ... +....+++|+++||||.||++|+|+||++ ++
T Consensus 157 tG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~--~~~-~~~~~~~~i~~~S~SK~~~~~GlR~G~~~--~~ 225 (353)
T PRK05387 157 TGIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----S--AIP-LIDRYPNLLVVQTFSKSRSLAGLRVGFAI--GH 225 (353)
T ss_pred CCCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----c--hHH-HHhhCCCEEEEEehhHhhcchhhhceeee--cC
Confidence 999999999999998653 8999999999887421 1 122 22344689999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhccc-ccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPM-YSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~i~~~~L~~ 349 (350)
+++++++....... ..+++.+.|.++..+|.+
T Consensus 226 -----~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~ 258 (353)
T PRK05387 226 -----PELIEALNRVKNSFNSYPLDRLAQAGAIAAIED 258 (353)
T ss_pred -----HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC
Confidence 45666666655432 235788899988888764
No 83
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-33 Score=269.98 Aligned_cols=238 Identities=15% Similarity=0.094 Sum_probs=182.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
....++|+.|++ +... .+.+.++..+.. .. ...|++. +.++||+++|+++ +. .+++|++ |+|+
T Consensus 31 ~~~~~~l~~~~~-~~~~----~~~~~~a~~~~~--~~-~~~Y~~~-~~~~Lr~~ia~~~-~~-----~~~~I~i--t~G~ 93 (369)
T PRK08153 31 RPFRARIGANES-GFGP----SPSVIAAMREAA--AE-IWKYGDP-ENHDLRHALAAHH-GV-----APENIMV--GEGI 93 (369)
T ss_pred CcceeEecCCCC-CCCC----CHHHHHHHHHHH--HH-hhcCCCC-ccHHHHHHHHHHh-CC-----CHHHEEE--cCCH
Confidence 345679999988 3222 333444443322 11 2458665 5899999999985 32 3789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. ...+.+||.|++++|+|+.|...++..|++++.+|+ +.+ +.|++.+++.+... +..++++++|||
T Consensus 94 ~~~l~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~-~~~--~~~~~~l~~~~~~~--~~~~i~l~~P~N 166 (369)
T PRK08153 94 DGLLGLIV--RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY-RDD--REDLDALLDAARRE--NAPLVYLANPDN 166 (369)
T ss_pred HHHHHHHH--HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeC-CCC--CCCHHHHHHHhccc--CCcEEEEeCCCC
Confidence 99998843 344789999999999999999999999999999998 543 58888888776432 123777799999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+ ++++||+||+|.+|.+++ ...+ +....+++|+++||||.||++|+|+||++ +
T Consensus 167 PtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v--~ 237 (369)
T PRK08153 167 PMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAPP---IDTDDPNVIRMRTFSKAYGLAGARVGYAI--G 237 (369)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cchh---hhhcCCCEEEEecchHhccCcchheeeee--c
Confidence 9999999999999999987 489999999999998753 1112 22234689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++.+.+.... .+++.+.|.++..+|++
T Consensus 238 ~-----~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~ 268 (369)
T PRK08153 238 A-----PGTIKAFDKVRNH--FGMNRIAQAAALAALKD 268 (369)
T ss_pred C-----HHHHHHHHHhhcC--CCCCHHHHHHHHHHhcC
Confidence 6 5566666665543 45889999999998865
No 84
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-33 Score=264.90 Aligned_cols=232 Identities=16% Similarity=0.195 Sum_probs=176.5
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|+|+.|.+ +. +.+..+++.+.+.+. ......|+ ..|.++||+++++++ + +.+++|++ |+|++
T Consensus 18 ~~~i~l~~~~~-~~---~~~~~~~~~~~~~~~--~~~~~~Y~-~~g~~~lr~~ia~~~-~-----~~~~~I~~--t~G~~ 82 (337)
T PRK03967 18 NYRIWLDKNEN-PF---DLPEELKEEIFEELK--RVPFNRYP-HITSDPLREAIAEFY-G-----LDAENIAV--GNGSD 82 (337)
T ss_pred CceEEecCCCC-CC---CCCHHHHHHHHHHhh--cCccccCC-CCCHHHHHHHHHHHh-C-----cCcceEEE--cCCHH
Confidence 46799999987 22 222344444444443 12235684 579999999999996 4 23789999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++.. .+ +||+|++++|+|+.|..+++..|++++.+++ +. ++++|++.+++.+. +++ +++++|||||
T Consensus 83 ~~l~~~~~---~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~~-~~~---~v~~~~P~NP 152 (337)
T PRK03967 83 ELISYLVK---LF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPL-KE-DFTIDGERIAEKAK-NAS---AVFICSPNNP 152 (337)
T ss_pred HHHHHHHH---Hh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeec-CC-CCCcCHHHHHHhcc-CCC---EEEEeCCCCC
Confidence 99977432 23 7999999999999999999999999999998 43 37899999987642 222 6667999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++.+++ ++++++|+||+|.+|... . .. .+....+++|+++||||.||++|+|+||++ ++
T Consensus 153 tG~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~--~~-~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv--~~ 219 (337)
T PRK03967 153 TGNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----S--LI-GLIDEYPNLILLRTFSKAFGLAGIRAGYAI--AN 219 (337)
T ss_pred CCCCCCHHHHHHHH----hcCCEEEEECchhhhccc----c--hH-HHHhhCCCEEEEecchHhhcchhhhheeee--cC
Confidence 99999998877665 479999999999998632 1 11 222334689999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++++.+.... .+++.++|.++..+|++
T Consensus 220 -----~~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~ 249 (337)
T PRK03967 220 -----EEIIDALYRIKPP--FSLNILTMKIVRLALDH 249 (337)
T ss_pred -----HHHHHHHHhhcCC--CCCCHHHHHHHHHHHhC
Confidence 5666777666543 36789999999998875
No 85
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.9e-33 Score=268.04 Aligned_cols=237 Identities=19% Similarity=0.139 Sum_probs=172.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..+.|+|+.|.+. . + +.+.+.++..... .. ...|++. +.++||+++|+++ + +.+++|++ |+|+
T Consensus 21 ~~~~i~l~~~~n~--~--~-~~~~~~~a~~~~~--~~-~~~Y~~~-~~~~Lr~aia~~~-~-----v~~~~I~i--t~G~ 83 (360)
T PRK07392 21 PDAILDFSASINP--L--G-PPESVIAAIQSAL--SA-LRHYPDP-DYRELRLALAQHH-Q-----LPPEWILP--GNGA 83 (360)
T ss_pred cccEEEeCCcCCC--C--C-CCHHHHHHHHHHH--HH-hhcCCCc-CHHHHHHHHHHHh-C-----cChhhEEE--CCCH
Confidence 3468999999772 2 1 2344455444433 12 3568765 4689999999997 3 23789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCC-C---CCCHHHHHHHhhcCCCCcEEEEec
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPAT-R---GLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~-~---~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
++++.++. .. +.+||.|++++|+|+.|...++..|++++.+|+ ++++ + ..+++.+++.. .+..+++++
T Consensus 84 ~~~i~~~~--~~-l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~ 155 (360)
T PRK07392 84 AELLTWAG--RE-LAQLRAVYLITPAFGDYRRALRAFGATVKELPL-PLDQPSPGLTLRLQTLPPQL----TPNDGLLLN 155 (360)
T ss_pred HHHHHHHH--HH-hCCCCeEEEECCCcHHHHHHHHHcCCeEEEEec-ccccCCcccccCHHHHHHhc----cCCCEEEEe
Confidence 99998843 33 457899999999999999999999999999998 4332 2 24555554432 123488889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
|||||||.+++++++ .++++++++ +|+||+|.+|.+++ .. .+........+++|+++||||.||++|+|+||+
T Consensus 156 nP~NPTG~~~~~~~l---~~l~~~~~~-~IiDE~y~~~~~~~--~~-~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~ 228 (360)
T PRK07392 156 NPHNPTGKLWSREAI---LPLLEQFAL-VVVDEAFMDFLPPD--AE-QSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYA 228 (360)
T ss_pred CCCCCCCCCcCHHHH---HHHHHHCCE-EEEECchhhhccCc--cc-cchHHHhhcCCCEEEEEechhhhcCCchheeee
Confidence 999999999997765 455667886 55599999998753 21 222222344468999999999999999999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 308 SIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ++ +++++++.+... ..+++.++|.++..+|++
T Consensus 229 v--~~-----~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~ 261 (360)
T PRK07392 229 I--AH-----PDRLQRWQQWRD--PWPVNGLAAAAAIAALAD 261 (360)
T ss_pred e--CC-----HHHHHHHHhhCC--CCCCCHHHHHHHHHHhcc
Confidence 8 76 455555555442 346889999999999875
No 86
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=255.35 Aligned_cols=255 Identities=15% Similarity=0.126 Sum_probs=202.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.+++++|.+.+. |...+ |.|.+|+++.. .....+|+ .+..++.+++++|........+.++.|++ ++|.
T Consensus 24 ~~DvlPmWVADM-Df~~p----p~i~~Al~~rv--dhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 24 NEDVLPMWVADM-DFPTP----PEIIEALRERV--DHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCcceeeeecc-cCCCC----HHHHHHHHHHH--hcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 478999999998 76544 34444444433 22346674 67889999999996655555566888988 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
..++.+ .+.++..+||.|++..|.|+++....+..|.++++.|+..++ .+.+|++.|++++.... ..++++||||
T Consensus 93 Vpgi~~--~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~--vkl~iLCnPH 168 (388)
T COG1168 93 VPGISL--AIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER--VKLFILCNPH 168 (388)
T ss_pred hHhHHH--HHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC--ccEEEEeCCC
Confidence 999998 445567899999999999999999999999999999995433 37789999999987643 3489999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeEEEE
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
||||.+++++|+++|.++|++||+.||+||+++++++.+ +...+...+.+. .+++|.+.|.||+|+++|+++++++
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g--~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~I- 245 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGG--HKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYII- 245 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccC--CCccchhhcChhhhcceEEEeeccccccchhhhheeEE-
Confidence 999999999999999999999999999999999999986 222333333222 3589999999999999999999988
Q ss_pred eeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 310 VCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 310 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+|++...++.+++++... .+++.++-.+...+.+
T Consensus 246 -i~n~~lr~~~~~~l~~~~~---~~~n~lg~~A~~aAY~ 280 (388)
T COG1168 246 -ISNRELRAKFLKRLKRNGL---HGPSALGIIATEAAYN 280 (388)
T ss_pred -ecCHHHHHHHHHHHHHhcC---CCCchHHHHHHHHHHH
Confidence 8998887788877765443 4677777666555443
No 87
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8e-33 Score=268.48 Aligned_cols=234 Identities=17% Similarity=0.149 Sum_probs=182.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++|+|+.|++ +.. +.+.+.+++.... ....|+ ..+.++||+++++++ +. .+++|++ |+|+
T Consensus 51 ~~~~i~l~~n~~-p~~----~~~~v~~a~~~~~----~~~~Yp-~~~~~~lr~~ia~~~-~~-----~~~~I~~--t~Ga 112 (380)
T PLN03026 51 PEDIVKLDANEN-PYG----PPPEVLEALGNMK----FPYVYP-DPESRRLRAALAEDS-GL-----ESENILV--GCGA 112 (380)
T ss_pred ccceEEccCCCC-CCC----CCHHHHHHHHhhH----hhccCC-CCCHHHHHHHHHHHh-Cc-----ChhhEEE--cCCH
Confidence 468999999987 222 1334555544322 123474 457899999999985 42 2789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh-hcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL-GSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l-~~~~~~~~~l~~~~p~ 230 (350)
++++.++ +.+.+.+||.|++++|+|+.|...++..|++++.+++ ++ ++++|++.+++.+ ..+++ ++++++||
T Consensus 113 ~~~i~~~--~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~~~~~~~---~v~l~~P~ 185 (380)
T PLN03026 113 DELIDLL--MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR-TP-DFSLDVPRIVEAVETHKPK---LLFLTSPN 185 (380)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHHHHhccCCc---EEEEeCCC
Confidence 9999884 3445789999999999999999999999999999998 43 4789999999988 33333 78889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|++.+ +++|+||+|.+|.+++ . ... .....+++|+++||||.||++|+|+||++
T Consensus 186 NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~--~~~-~~~~~~~viv~~SfSK~~glaGlRiGy~~-- 253 (380)
T PLN03026 186 NPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---S--RMK-WVKKYDNLIVLRTFSKRAGLAGLRVGYGA-- 253 (380)
T ss_pred CCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---c--hHH-HHHhCCCEEEEecchHhhcCccccceeee--
Confidence 9999999999999998754 8999999999998642 1 122 22345689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+++.+.+.... .+++.++|.++..+|++
T Consensus 254 ~~-----~~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~ 285 (380)
T PLN03026 254 FP-----LSIIEYLWRAKQP--YNVSVAAEVAACAALSN 285 (380)
T ss_pred cC-----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhhC
Confidence 76 5667777665543 45788899998888865
No 88
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-33 Score=265.61 Aligned_cols=235 Identities=19% Similarity=0.214 Sum_probs=190.0
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
++++|+.+++ +-|+ .+.+.++..... . ..+.|+.. ...+|+++++++..+. .+++|++ ++|+++
T Consensus 23 ~~i~LssNen--P~gp---~~~~~~~~~~~~--~-~~~rYPd~-~~~~l~~a~a~~~~~~-----~~~~V~~--gnGsde 86 (356)
T COG0079 23 GIIKLSSNEN--PYGP---PPKVIEAIRAAL--D-KLNRYPDP-DYRELRAALAEYYGVV-----DPENVLV--GNGSDE 86 (356)
T ss_pred cceeecCCCC--CCCC---CHHHHHHHHHHH--H-hhccCCCC-cHHHHHHHHHHHhCCC-----CcceEEE--cCChHH
Confidence 6899999987 2222 344455444433 1 24668544 7899999999995332 2789999 999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC
Q 018820 154 SLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233 (350)
Q Consensus 154 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT 233 (350)
.+.++ +.+.+.+||+|+++.|+|..|...++..|++++.+|+ .+ |.+|++.+.+.+..+++ ++++|||||||
T Consensus 87 ~i~~l--~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~-~~--~~~d~~~~~~~~~~~~~---lv~i~nPNNPT 158 (356)
T COG0079 87 LIELL--VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL-KE--FRLDLDAILAAIRDKTK---LVFLCNPNNPT 158 (356)
T ss_pred HHHHH--HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecc-cc--cccCHHHHHHhhhcCCC---EEEEeCCCCCC
Confidence 99984 4556889999999999999999999999999999999 44 88999999999887555 89999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 234 G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
|..++.++++++++.+.+ +.++|.||||.+|... .....+ ...+++|+++||||.||++|+|+||++ +.
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~------~~~~l~-~~~~nlivlRTfSKa~gLAGlRlGy~i--a~- 227 (356)
T COG0079 159 GTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE------SSLELL-KYPPNLIVLRTFSKAFGLAGLRVGYAI--AN- 227 (356)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc------hhhhhc-cCCCCEEEEEecHHhhhcchhceeecc--CC-
Confidence 999999999999999988 8999999999999852 122222 345679999999999999999999966 66
Q ss_pred hhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 314 ADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 314 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+.+++.+++...+ .+.+.+++.++...|.|
T Consensus 228 ----~~~i~~l~~vr~p--~~v~~~a~~aa~aal~~ 257 (356)
T COG0079 228 ----PELIAALNKVRPP--FNVSSPALAAAIAALRD 257 (356)
T ss_pred ----HHHHHHHHHhcCC--CCCCHHHHHHHHHHccc
Confidence 6778877776654 45788888888888775
No 89
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-33 Score=266.40 Aligned_cols=238 Identities=19% Similarity=0.157 Sum_probs=182.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.+++|+|+.|++ +. .+.+.+.++...... ......|++ .|.++||+++++++ +.. . .++|++ |+|+
T Consensus 25 ~~~~i~l~~~~~-~~----~~~~~~~~~~~~~~~-~~~~~~Y~~-~~~~~lr~~ia~~~-~~~-~---~~~I~~--t~G~ 90 (356)
T PRK04870 25 ATGMVKLDAMEN-PY----RLPAELRAELGERLA-EVALNRYPD-PRAAALKAALRAAM-GVP-A---GADVLL--GNGS 90 (356)
T ss_pred CCCceeCcCCCC-CC----CCCHHHHHHHHHHhh-ccccccCCC-CCHHHHHHHHHHHh-CcC-C---CCcEEE--cCCH
Confidence 457999999988 32 224444554444321 222356866 68899999999996 432 1 358888 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. .+.+.+||+|++++|+|..|..+++..|++++.+|+ ++ ++++|++.+++.+.... ..++++++|||
T Consensus 91 ~~~i~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~-~~-~~~~d~~~l~~~~~~~~--~~~v~l~~p~N 164 (356)
T PRK04870 91 DELIQLLA--LACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPL-TA-DFTLDLPAMLAAIAEHR--PALVFLAYPNN 164 (356)
T ss_pred HHHHHHHH--HHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHHHhhcCC--CCEEEEcCCCC
Confidence 99998843 345789999999999999999999999999999998 53 47899999999886422 22677789999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++| ++++|+||+|.+|.+++ . ...+ ...+++|+++|||| ++++|+|+||++ +
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-----~-~~~~-~~~~~vi~~~S~SK-~~~~GlRiG~~i--~ 231 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS-----W-LPRL-ARFPNLLVMRTVSK-LGLAGLRLGYLA--G 231 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc-----h-HHHH-hhCCCEEEEecchh-hhhHHHhhhhhh--C
Confidence 999999999999999998 67899999999987532 1 1112 33458999999999 899999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++++..... ..+++.++|.++..++++
T Consensus 232 ~-----~~~i~~~~~~~~--~~~~~~~~q~~a~~~l~~ 262 (356)
T PRK04870 232 H-----PAWIAELDKVRP--PYNVNVLTQATALFALEH 262 (356)
T ss_pred C-----HHHHHHHHHccC--CCcCCHHHHHHHHHHHhC
Confidence 6 566666665542 235788899888877754
No 90
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=261.82 Aligned_cols=230 Identities=15% Similarity=0.114 Sum_probs=169.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+.++|+|++|++ +.. ++..++++..+.+. ......|++ .|.++||+++++|+.... +.+++|++ |+|+
T Consensus 18 ~~~~i~l~~~~~-~~~---~p~~~~~~~~~~~~--~~~~~~Y~~-~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~Ga 85 (335)
T PRK14808 18 KRDRTYLALNEN-PFP---FPEDLVDEVFRRLN--SDTLRIYYD-SPDEELIEKILSYLDTDF---LSKNNVSV--GNGA 85 (335)
T ss_pred CCceeEecCCCC-CCC---CCHHHHHHHHHHhh--hhhhhcCCC-CChHHHHHHHHHHhCCCC---CCcceEEE--cCCH
Confidence 458999999998 432 22333333333333 222233654 489999999999964332 34899999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. .+. |.|++++|+|+.|..+++.+|++++.+|+ +++ +.++... +. . ..+++++||||
T Consensus 86 ~~~i~~~~--~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~-~~~-~~~~~~~----~~-~---~~~i~i~nP~N 149 (335)
T PRK14808 86 DEIIYVMM--LMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TKD-LRIPEVN----VG-E---GDVVFIPNPNN 149 (335)
T ss_pred HHHHHHHH--HHh----CcEEECCCCHHHHHHHHHHcCCeEEEecC-CCc-CCCChhH----cc-C---CCEEEEeCCCC
Confidence 99998843 332 67999999999999999999999999998 543 3344221 21 1 23788999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+ +++++||+||+|.+|... . ... +....+++|+++||||.||++|+|+||++ +
T Consensus 150 PTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~--~~~-~~~~~~~vi~~~S~SK~~~l~GlRvG~~v--~ 216 (335)
T PRK14808 150 PTGHVFEREEIERIL----KTGAFVALDEAYYEFHGE----S--YVD-LLKKYENLAVIRTFSKAFSLAAQRIGYVV--S 216 (335)
T ss_pred CCCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----c--hHH-HHHhCCCEEEEEechhhccCcccceEEEE--e
Confidence 999999999998886 479999999999998521 1 111 22334689999999999999999999988 8
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++.+.+... ..+.+.++|.++..++++
T Consensus 217 ~-----~~~~~~l~~~~~--~~~~~~~~q~a~~~~l~~ 247 (335)
T PRK14808 217 S-----EKFIDAYNRVRL--PFNVSYVSQMFAKVALDH 247 (335)
T ss_pred C-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhC
Confidence 7 567777766553 356788889888887764
No 91
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-32 Score=258.99 Aligned_cols=236 Identities=19% Similarity=0.223 Sum_probs=178.9
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
+..++|+.|.+ +.. + ++.+.++..+... ......|++. +.++||+++|+++ +. .+++|++ |+|++
T Consensus 22 ~~~~~l~~~~~-~~~---~-p~~~~~a~~~~~~-~~~~~~y~~~-~~~~lr~~ia~~~-~~-----~~~~i~i--t~G~~ 86 (351)
T PRK14807 22 PYKYKMDANET-PFE---L-PEEVIKNIQEIVK-SSQVNIYPDP-TAEKLREELARYC-SV-----VPTNIFV--GNGSD 86 (351)
T ss_pred CceeEccCCCC-CCC---C-CHHHHHHHHHHhh-cCcccCCCCc-cHHHHHHHHHHHh-CC-----CcccEEE--ecCHH
Confidence 45799999998 422 2 3344444444331 2233568654 4699999999995 32 2789999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHN 231 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~N 231 (350)
+++.+++ .+.+.+||.|++++|+|..|...++..|++++.++. ++ ++++|++.+++.++. +++ ++++++|||
T Consensus 87 ~~l~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~~~~~~k---~v~l~~p~N 159 (351)
T PRK14807 87 EIIHLIM--LAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL-KE-DYTYDVGSFIKVIEKYQPK---LVFLCNPNN 159 (351)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec-CC-CCCCCHHHHHHHhhccCCC---EEEEeCCCC
Confidence 9998843 445789999999999999999999999999999998 43 478999999998864 333 677789999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.++++++++ +++.++|+||+|.+|. + ... .. +....+++|+++||||.||++|+|+||++ +
T Consensus 160 PtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~---~~~--~~-~~~~~~~vi~~~S~SK~~~~~GlRiG~~v--~ 227 (351)
T PRK14807 160 PTGSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-G---NTI--VD-VINEFENLIVLRTLSKAFGLAGLRVGYAV--A 227 (351)
T ss_pred CCCCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-c---cch--HH-HhhhCCCEEEEecchHhcccchhceeeee--c
Confidence 9999999988877765 5567899999999884 3 111 11 22334689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++.+...... .+++.+.|.++..+|++
T Consensus 228 ~-----~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~ 258 (351)
T PRK14807 228 N-----ENILKYLNLVKSP--YNINSLSQVIALKVLRT 258 (351)
T ss_pred C-----HHHHHHHHHccCC--CCcCHHHHHHHHHHHhH
Confidence 6 5666666665543 45788999999988864
No 92
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-32 Score=251.91 Aligned_cols=226 Identities=17% Similarity=0.205 Sum_probs=186.2
Q ss_pred CCCCCCCCcHHHHHHHHHHH--hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-H
Q 018820 111 KEYLPIVGLAEFNKLSAKLI--LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-L 187 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~--~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~ 187 (350)
..|.+..|++.||+++|+++ .........++++++ ++|+|++...+. +.+++|||..++|.|.|+++..-++ +
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~--fcLadpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLM--FCLADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHH--HHhcCCCceeeecCCCCCcccccceec
Confidence 44888999999999999993 222334466999999 999999998853 3457899999999999999987777 7
Q ss_pred cCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 188 AGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 188 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
.|+++++|.+...+++.++.++++++++++ ..+..-+++.||+||.|++++++++..++++|.++++.+|+||+|.+
T Consensus 191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 899999999977788999999999998763 23344677789999999999999999999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHhh----cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHH
Q 018820 265 FASGSLDSDAQSVRMFVA----DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGA 340 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~----~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q 340 (350)
-+++.. ...++..... ..+++.+++|+||.||+||+|+|.+. +.|+ .+.+...++. ++...|.+.|
T Consensus 271 sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviY--S~ne----~VvsaA~kms--sf~~vSs~tQ 340 (471)
T KOG0256|consen 271 SVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIY--SNNE----DVVSAATKMS--SFGLVSSQTQ 340 (471)
T ss_pred cccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEE--ecCh----HHHHHHHHHh--hccCCcHHHH
Confidence 888753 2234444333 23589999999999999999999888 7764 4555555554 5677899999
Q ss_pred HHHHHHhcCC
Q 018820 341 SIVAAILRDR 350 (350)
Q Consensus 341 ~i~~~~L~~~ 350 (350)
.+++.+|+|+
T Consensus 341 ~~la~LLSD~ 350 (471)
T KOG0256|consen 341 YLLASLLSDE 350 (471)
T ss_pred HHHHHHhchH
Confidence 9999999983
No 93
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-31 Score=260.14 Aligned_cols=243 Identities=17% Similarity=0.192 Sum_probs=188.6
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..+.|+|+.|.+ + ..+.+.+.+++.....+ .....|.+..|.++||+++++++ |. .+++|++ |+|+
T Consensus 27 ~~~~i~l~~~~~-~----~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~l-~~-----~~~~v~~--~~g~ 92 (380)
T PRK06225 27 DKEMIWMGQNTN-H----LGPHEEVREAMIRCIEE-GEYCKYPPPEGFPELRELILKDL-GL-----DDDEALI--TAGA 92 (380)
T ss_pred cCCeEEccCCCC-C----CCCCHHHHHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHhc-CC-----CCCcEEE--eCCH
Confidence 457999999987 3 22355666666665522 23356988999999999999985 43 2678999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec-CCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD-PATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
++++.++. ..++.+||+|++++|+|..+...++..|++++++++.+ ++++.+|++.+++.+...++ ++++++||
T Consensus 93 t~al~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~---~v~l~~p~ 167 (380)
T PRK06225 93 TESLYLVM--RAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTR---LIYLIDPL 167 (380)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCce---EEEEeCCC
Confidence 99998843 44577999999999999999999999999999999733 23578999999998865433 67777999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.+|..+. .....+ ..++++++.||||.||++|+|+||++
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-----~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~-- 238 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH-----TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVV-- 238 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC-----Cchhhc--CCCCEEEEeechhhcCCccceeEEEe--
Confidence 999999999999999999999999999999999887542 112112 23689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +.+++.+...... ..+++.++|.++...|.
T Consensus 239 ~~-----~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~ 270 (380)
T PRK06225 239 AT-----PDLIEVVKSIVIN-DLGTNVIAQEAAIAGLK 270 (380)
T ss_pred cC-----HHHHHHHHHHHhc-ccCCCHHHHHHHHHHHh
Confidence 76 4555555554432 34567788887766664
No 94
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=6.3e-32 Score=255.35 Aligned_cols=218 Identities=17% Similarity=0.205 Sum_probs=163.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++|+|+.|.+ .. + .+.+.+++.+.. .. ...|+. ...||++++++. + ++|++ |+|+
T Consensus 7 ~~~~i~l~~~~n-p~-~----p~~~~~a~~~~~--~~-~~~yp~---~~~l~~~ia~~~-~--------~~I~v--t~G~ 63 (311)
T PRK08354 7 EEGLIDFSASVN-PY-P----PEWLDEMFERAK--EI-SGRYTY---YEWLEEEFSKLF-G--------EPIVI--TAGI 63 (311)
T ss_pred ccceeEecCCCC-CC-C----CHHHHHHHHHHH--HH-hhcCCC---hHHHHHHHHHHH-C--------CCEEE--CCCH
Confidence 346899999966 21 1 234445444433 11 235743 467999999885 3 36888 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. ..+.+||+|++++|+|+.|..+++..|++++.++ +|++.+++.+++ ++ +++++||||
T Consensus 64 ~~al~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~~-~~---~vi~~~P~N 128 (311)
T PRK08354 64 TEALYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVER-NS---VVFFCNPNN 128 (311)
T ss_pred HHHHHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhcC-CC---EEEEecCCC
Confidence 99998753 2345899999999999999999999999997643 578888887652 22 677899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+++|+++|+||+|.+|.+++ . .. ..+++|+++||||.|+++|+|+||++ +
T Consensus 129 PTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~--~---~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v--~ 196 (311)
T PRK08354 129 PDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP--E---SP-----EGENIIKLRTFTKSYGLPGIRVGYVK--G 196 (311)
T ss_pred CCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc--c---cc-----CCCcEEEEeccHhhcCCccceeeeee--e
Confidence 99999999999999999999999999999999999863 1 11 14689999999999999999999988 5
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
. .+.++..... ...+..++.++..++++
T Consensus 197 ~--------~~~l~~~~~~--~~~~~~~~~~~~~~~~~ 224 (311)
T PRK08354 197 F--------EEAFRSVRMP--WSIGSTGYAFLEFLIED 224 (311)
T ss_pred h--------HHHHHHcCCC--ccCCHHHHHHHHHHHHh
Confidence 1 2333443332 23455667777776653
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.9e-32 Score=260.82 Aligned_cols=239 Identities=18% Similarity=0.232 Sum_probs=184.5
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
+++|+|+.|.+ +. ++ .+.+.++..... .. ...| |..|.++||+++|+++ +. .+++|++ |+|++
T Consensus 22 ~~~i~l~~~~~-~~-~~---~~~~~~a~~~~~--~~-~~~y-~~~g~~~lr~~ia~~~-~~-----~~~~I~~--~~G~~ 84 (352)
T PRK03321 22 PGAIKLSSNET-PF-GP---LPSVRAAIARAA--AG-VNRY-PDMGAVELRAALAEHL-GV-----PPEHVAV--GCGSV 84 (352)
T ss_pred ccceeccCCCC-CC-CC---CHHHHHHHHHHH--Hh-cCcC-CCCcHHHHHHHHHHHh-Cc-----CHHHEEE--CCCHH
Confidence 46899999988 32 22 345666655544 12 2447 5679999999999996 32 2789999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++. ...+.+||.|+++.|+|..|...++..|++++.+++ +++ +++|++.+++.+..+++ ++++++||||
T Consensus 85 ~~l~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~-~~~-~~~~~~~l~~~~~~~~~---~v~l~~p~NP 157 (352)
T PRK03321 85 ALCQQLV--QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPL-TPD-HTHDLDAMAAAITDRTR---LIFVCNPNNP 157 (352)
T ss_pred HHHHHHH--HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccC-CCC-CCCCHHHHHHhhccCCC---EEEEeCCCCC
Confidence 9988743 345789999999999999999999999999999998 533 67999999998865443 6777899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++.++++.+ ++++++|+||+|++|.+++ ....+...+ ...+++|+++||||.||++|+|+||++ ++
T Consensus 158 tG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v--~~ 231 (352)
T PRK03321 158 TGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDD--DVPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAV--GH 231 (352)
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCc--CCCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhc--CC
Confidence 99999999999988876 4799999999999998864 211222222 334689999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+.+++.+.+.. ...+++.++|.++...|.
T Consensus 232 -----~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 232 -----PEVIAALRKVA--VPFSVNSLAQAAAIASLA 260 (352)
T ss_pred -----HHHHHHHHHhc--CCCCCCHHHHHHHHHHhc
Confidence 45666666543 234678889887777664
No 96
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-32 Score=260.35 Aligned_cols=229 Identities=18% Similarity=0.184 Sum_probs=176.2
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
+.++|+.+++ . .+++ +.+ . ......|+. ....+|+++++++ +|.+ +++|++ |+|+++
T Consensus 29 ~~~~l~~Nen-p-~~~~---~~~-------~--~~~~~~Yp~-~~~~~l~~~~a~~-~g~~-----~~~I~~--~~Gs~e 85 (351)
T PRK01688 29 GDVWLNANEY-P-TAVE---FQL-------T--QQTLNRYPE-CQPKAVIENYAAY-AGVK-----PEQVLV--SRGADE 85 (351)
T ss_pred CceEecCCCC-C-CCCC---hhh-------c--ccccccCCC-CChHHHHHHHHHH-hCCC-----HHHEEE--cCCHHH
Confidence 4699999887 2 2221 211 1 112345744 4458999999998 4542 789999 999999
Q ss_pred HHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 154 SLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 154 al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
++.++. .+++.+| |.|++++|+|+.|...++..|++++.+|+ ++ ++++|++.+++.+ .+++ +++++|||||
T Consensus 86 ~i~~~~--~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~-~~-~~~~d~~~l~~~~-~~~~---lv~l~nPnNP 157 (351)
T PRK01688 86 GIELLI--RAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPT-LD-NWQLDLPAIADNL-DGVK---VVYVCSPNNP 157 (351)
T ss_pred HHHHHH--HHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeec-CC-CCCCCHHHHHHhc-cCCc---EEEEeCCCCC
Confidence 998854 4456787 89999999999999999999999999998 54 4889999999877 3333 7888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||..++.+++++|++.|++ +.++|+||+|.+|... . +...+.....++|+++||||.||++|+|+||++ ++
T Consensus 158 TG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~---~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i--~~ 228 (351)
T PRK01688 158 TGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTL--AN 228 (351)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC---C---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHh--CC
Confidence 9999999999999999976 6789999999999743 1 222233445689999999999999999999988 76
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++.+.+.... .+.+.+.|.++..+|.+
T Consensus 229 -----~~~i~~l~~~~~~--~~v~~~~~~~a~~~L~~ 258 (351)
T PRK01688 229 -----EEVINLLLKVIAP--YPLSTPVADIAAQALSP 258 (351)
T ss_pred -----HHHHHHHHhccCC--CCCCHHHHHHHHHHHhc
Confidence 5666666665433 35677788888888764
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-31 Score=258.54 Aligned_cols=210 Identities=16% Similarity=0.189 Sum_probs=167.1
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcC
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAG 189 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G 189 (350)
..|+.. +.++||+++|+++ +. .+++|++ |+|+++++.++ +.+++.+| |.|++++|+|..|...++..|
T Consensus 54 ~~Y~~~-~~~~lr~~ia~~~-~~-----~~~~I~~--t~G~~~~l~~~--~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYPDP-QPPGLRSALAALY-GC-----APEQLLI--GRGSDEAIDLL--VRALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCCCC-CHHHHHHHHHHHh-Cc-----ChHHEEE--eCCHHHHHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 458655 4699999999985 43 2789999 99999999884 34456788 799999999999999999999
Q ss_pred CeEEEEEeec-CCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 190 LSVKSYRYYD-PATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 190 ~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
++++.+|+.+ .+++.+|++.+++.+... +..++++++||||||.+++.+++++|+++|+ ++++||+||+|.+|.++
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~--~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALAS--NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhcc--CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 9999999832 235678998887655322 2337777899999999999999999999986 47899999999999853
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
. +...+....+++|+++||||.||++|+|+||++ ++ +++++.+.+.... .+.+.++|.++..+|+
T Consensus 200 ~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v--~~-----~~l~~~l~~~~~~--~~~~~~~~~~a~~~l~ 264 (364)
T PRK04781 200 P------SAVGLLARYDNLAVLRTLSKAHALAAARIGSLI--AN-----AELIAVLRRCQAP--YPVPTPCAALAEQALS 264 (364)
T ss_pred c------chHHHHhhCCCEEEEecChhhcccccceeeeee--CC-----HHHHHHHHhccCC--CCCCHHHHHHHHHHHh
Confidence 1 112222445689999999999999999999988 77 6677777776543 3577888888888887
Q ss_pred C
Q 018820 349 D 349 (350)
Q Consensus 349 ~ 349 (350)
+
T Consensus 265 ~ 265 (364)
T PRK04781 265 A 265 (364)
T ss_pred c
Confidence 5
No 98
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=5e-31 Score=277.40 Aligned_cols=229 Identities=11% Similarity=0.059 Sum_probs=170.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEe
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQ 147 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~ 147 (350)
+++++|+|++|++ +.. +.+.+++++..... .. .| ..|.+++|+++++|+ +|.+.. .+++|++
T Consensus 695 ~g~~vI~LsinE~-d~p----pPp~V~eAi~eal~-~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d--~~e~IIv-- 759 (1082)
T PLN02672 695 QESSLIHMDVDES-FLP----VPSAVKASIFESFV-RQ---NI--SESETDPRPSILQFIKSNYGFPTD--SCTEFVY-- 759 (1082)
T ss_pred CCCCEEEEeCCCC-CCC----CCHHHHHHHHHHHh-hc---CC--CCCChHHHHHHHHHHHHHhCcCCC--CCCEEEE--
Confidence 3568999999998 432 24555555544331 11 12 346788899999984 344322 1458988
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
|+|+++++.+ .+.+++.+||.|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.++..+. ..++++
T Consensus 760 t~Gs~elL~l--ll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~--~~I~L~ 835 (1082)
T PLN02672 760 GDTSLALFNK--LVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKK--PWVYIS 835 (1082)
T ss_pred eCCHHHHHHH--HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC--CEEEEE
Confidence 9999999987 345667899999999999999999999999999999993345799999999998865322 267778
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH----HHhh--cCCcEEEEeccccccCcc
Q 018820 228 CAH-NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR----MFVA--DGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 228 ~p~-NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~----~~~~--~~~~vi~~~S~SK~~gl~ 300 (350)
||| ||||.+++.+++++|+++|++||++||+||+|.++.|++......+.. .+.. ...++|+++||||.|+++
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lp 915 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSG 915 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccH
Confidence 896 999999999999999999999999999999999988864110011111 1111 123799999999999999
Q ss_pred CcceeEEEEeeCChhHHHHH
Q 018820 301 GERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 301 G~RvG~l~~v~~~~~~~~~~ 320 (350)
|||+||++ +++++..+.+
T Consensus 916 GLRIGylI--ap~~eLi~~l 933 (1082)
T PLN02672 916 GHEFGFLA--LNDSVLIDAF 933 (1082)
T ss_pred HHHheeEE--eCCHHHHHHH
Confidence 99999988 8754333333
No 99
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3e-31 Score=252.80 Aligned_cols=218 Identities=15% Similarity=0.167 Sum_probs=165.1
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.++|+|+.+++.. +++. .+... ..+ ..|+. |..+||+++++++ + .++|++ |+|++
T Consensus 20 ~~~i~l~~ne~p~--~~~~-~~~~~---~~~-------~~yp~--~~~~Lr~~ia~~~-~-------~~~I~i--t~Gs~ 74 (330)
T PRK05664 20 ADWLDLSTGIAPW--PWPV-PAIPA---DAW-------ARLPE--TDDGLEAAARAYY-G-------APQLLP--VAGSQ 74 (330)
T ss_pred HHheeecCCcCCC--CCCC-cccCH---HHH-------HhCCC--ChHHHHHHHHHHh-C-------CCCEEE--CcCHH
Confidence 3579999996522 2121 11111 111 12643 3489999999985 3 368999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.+++ .+.+||+|++++|+|+.|..+++..|++++.+|+ + .+++.+. .++ +++++|||||
T Consensus 75 ~al~~~~----~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~-~---------~~~~~~~-~~~---~v~l~nP~NP 136 (330)
T PRK05664 75 AAIQALP----RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE-A---------EVEAALD-SLD---VLVVVNPNNP 136 (330)
T ss_pred HHHHHHH----HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech-h---------hHhhhhc-CCC---EEEEeCCcCC
Confidence 9998843 2579999999999999999999999999999886 2 2444442 233 6778899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++++|+++|++++++||+||+|.++... .++..+. ..+++|+++||||.||++|+|+||++ ++
T Consensus 137 TG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v--~~ 207 (330)
T PRK05664 137 TGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVL--AE 207 (330)
T ss_pred CCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------ccccccc-cCCCEEEEeeccccccCCCcceEEEE--eC
Confidence 999999999999999999999999999999887532 1233332 34689999999999999999999988 87
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++.+...... .+.+.+.|.++..+|++
T Consensus 208 -----~~l~~~~~~~~~~--~~~~~~~~~~~~~~L~~ 237 (330)
T PRK05664 208 -----PALLRALAELLGP--WTVSGPTRWLAQAALAD 237 (330)
T ss_pred -----HHHHHHHHHhcCC--CCCCHHHHHHHHHHHhC
Confidence 5677777666542 34677888888888875
No 100
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.98 E-value=4.8e-31 Score=254.55 Aligned_cols=240 Identities=18% Similarity=0.173 Sum_probs=184.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++++|+.|.+ +. ++ .+.+.++...... . ...|++..+ .+||+++|+++ +. .+++|++ |+|+
T Consensus 31 ~~~~i~l~~~~~-~~-~~---~~~~~~a~~~~~~--~-~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i~~--t~G~ 93 (367)
T PRK02731 31 IADIIKLASNEN-PL-GP---SPKAIEAIRAAAD--E-LHRYPDGSG-FELKAALAEKF-GV-----DPERIIL--GNGS 93 (367)
T ss_pred CCceEEecCCCC-CC-CC---CHHHHHHHHHHHH--h-hcCCCCCcH-HHHHHHHHHHh-Cc-----CHHHEEE--cCCH
Confidence 457999999987 22 22 3445555544431 1 246866544 79999999986 43 2689999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.+++ .+++.+||.|++++|+|..|...++..|++++.++. +++++|++.+++.+..+++ ++++++|||
T Consensus 94 ~~~l~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~---~v~l~~p~n 165 (367)
T PRK02731 94 DEILELLA--RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTR---LVFIANPNN 165 (367)
T ss_pred HHHHHHHH--HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCc---EEEEeCCCC
Confidence 99998743 445779999999999999999888999999999987 3478999999998865433 777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|++.|+ +++++|+||+|.++.+++. ...+... ....+++|+++||||.||++|+|+||++ +
T Consensus 166 ptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~RiG~l~--~ 239 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGLEL-VAKFPNVVVTRTFSKAYGLAGLRVGYGI--A 239 (367)
T ss_pred CCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHHHH-HhhcCCEEEEeeehHhhcCcccceeeee--C
Confidence 9999999999999999885 6999999999999887541 1123322 2345689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++++...... .+.+.++|.++..+|++
T Consensus 240 ~-----~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~ 270 (367)
T PRK02731 240 P-----PEIIDALNRVRQP--FNVNSLALAAAVAALDD 270 (367)
T ss_pred C-----HHHHHHHHHccCC--CCCCHHHHHHHHHHhCC
Confidence 6 4566666655432 35678899999888864
No 101
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.97 E-value=8.8e-31 Score=249.53 Aligned_cols=236 Identities=18% Similarity=0.171 Sum_probs=180.0
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCc
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAI 138 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~ 138 (350)
+|..+..++.. +.++.++|+.|.+ ... .+..+.. ......|++..| ++||+++++++ +.
T Consensus 4 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~-----~~~~~~~-------~~~~~~y~~~~~-~~lr~~la~~~-~~----- 62 (330)
T TIGR01140 4 NLRRAAARYGI-PPEDWLDFSTGIN-PLG-----PPVPPIP-------ASAWARYPDPEY-DELRAAAAAYY-GL----- 62 (330)
T ss_pred cHHHHHHHcCC-ChhheeEccccCC-CCC-----CChhhcc-------hHHHhhCCCccH-HHHHHHHHHHh-CC-----
Confidence 34455666654 5778999999987 221 1222211 112356877776 99999999985 43
Q ss_pred cCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 139 RENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 139 ~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
.+++|++ |+|+++++.+++. .+.+| .|++++|+|..|..+++..|++++.++ |++.+++.++ .+
T Consensus 63 ~~~~i~~--t~G~~~~i~~~~~---~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~ 126 (330)
T TIGR01140 63 PAASVLP--VNGAQEAIYLLPR---LLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-EL 126 (330)
T ss_pred ChhhEEE--CCCHHHHHHHHHH---HhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cC
Confidence 2689999 9999999988532 34677 699999999999999999999998876 7788888773 23
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+ ++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.++. +...+....+++|+++||||.||
T Consensus 127 ~---~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~~g 197 (330)
T TIGR01140 127 D---VLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKFFG 197 (330)
T ss_pred C---EEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchhhc
Confidence 3 67779999999999999999999999999999999999999998541 22222233468999999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+|+||++ ++ +.+++.+...... .+++.++|.++..+|++
T Consensus 198 ~~G~R~G~i~--~~-----~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~ 239 (330)
T TIGR01140 198 LAGLRLGFVV--AH-----PALLARLREALGP--WTVNGPARAAGRAALAD 239 (330)
T ss_pred Cchhhhhhee--CC-----HHHHHHHHhcCCC--CCchHHHHHHHHHHHhc
Confidence 9999999988 76 4566666655432 35678899999998875
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3.6e-31 Score=254.57 Aligned_cols=228 Identities=17% Similarity=0.179 Sum_probs=173.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|+|+.+++ . .+++ +.+ ... ...+|++. +.++||+++|++. |. .+++|++ |+|++
T Consensus 31 ~~~~~l~~ne~-~-~~~~---~~~-----~~~----~~~~Yp~~-~~~~Lr~aia~~~-~~-----~~~~I~i--t~Gs~ 87 (354)
T PRK04635 31 RGDIWINANES-P-FNNE---YKL-----DLA----RLNRYPEC-QPPELINAYSAYA-GV-----APEQILT--SRGAD 87 (354)
T ss_pred CCcEEeeCCCC-C-CCCC---hhh-----hhH----HhccCCCC-CHHHHHHHHHHHh-Cc-----CHHHEEE--eCCHH
Confidence 45699999988 2 2222 111 111 13458554 6899999999984 43 2889999 99999
Q ss_pred hHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 153 GSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 153 ~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
+++.+++ .+++.+| |.|++++|+|+.|...++..|++++.+|+ ++ ++.+|++.++. + .++ .+++++||||
T Consensus 88 ~~i~~~~--~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~-~~-~~~~~~~~l~~-~-~~~---~li~i~nP~N 158 (354)
T PRK04635 88 EAIELLI--RAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPL-TA-DYQLPLDYIEQ-L-DGA---KLVFICNPNN 158 (354)
T ss_pred HHHHHHH--HHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEec-CC-CCCCCHHHHHh-c-cCC---CEEEEeCCCC
Confidence 9999854 4456788 89999999999999999999999999998 53 46789888863 3 233 3778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+ +++||+||+|.+|... . +...+....+++|+++||||.||++|+|+||++ +
T Consensus 159 PTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i--~ 228 (354)
T PRK04635 159 PTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTL--A 228 (354)
T ss_pred CCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhh--C
Confidence 9999999999999999876 3999999999998743 1 222233345689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++.+...... .+.+...|.++..+|.+
T Consensus 229 ~-----~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~ 259 (354)
T PRK04635 229 N-----EELIEILMRVIAP--YPVPLPVSEIATQALSE 259 (354)
T ss_pred C-----HHHHHHHHhhcCC--CCCCHHHHHHHHHHHhc
Confidence 6 5566666554432 35667778787777754
No 103
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=5e-31 Score=252.14 Aligned_cols=220 Identities=18% Similarity=0.175 Sum_probs=165.7
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|+|+.+++ ..|+|. +.+.. ..+ ..|+.. . .+||++++++. |.. .+++|++ |+|++
T Consensus 24 ~~~i~ls~Nen--p~~~~~--~~~~~--~~~-------~~Yp~~-~-~~L~~~ia~~~-~~~----~~~~I~i--~~Gs~ 81 (339)
T PRK06959 24 DAWLDLSTGIN--PHGYPV--PPVPA--DAW-------RRLPED-D-DGLAACAARYY-GAP----DAAHVLP--VAGSQ 81 (339)
T ss_pred hhhceeccCCC--CCCCCC--CCCCH--HHH-------HhCCCc-h-HHHHHHHHHHh-CCC----CcccEEE--CcCHH
Confidence 45799999987 233321 11111 111 237543 3 89999999984 442 1579999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++. ..+.+|+ |++++|+|+.|...++..|++++.++. +. +.+ ....+ +++++|||||
T Consensus 82 e~i~~l~---~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~-~~-------~~~----~~~~~---~v~l~nPnNP 142 (339)
T PRK06959 82 AAIRALP---ALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDE-AA-------DTL----PAALT---HLIVVNPNNP 142 (339)
T ss_pred HHHHHHH---HhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecc-cc-------hhc----cccCC---EEEEeCCCCC
Confidence 9998643 3356776 889999999999999999999998877 32 112 11222 6788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++++|++.|++++.++|+||+|.+|.+. .+...+. ..+++|+++||||.||++|+|+||++ ++
T Consensus 143 TG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v--~~ 213 (339)
T PRK06959 143 TAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVL--AA 213 (339)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChhhcCCcchheEEEe--cC
Confidence 999999999999999999999999999999999743 1232232 34679999999999999999999988 87
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++++.+.... .+.+.++|.++..+|++
T Consensus 214 -----~~li~~l~~~~~~--~~vs~~~q~a~~~~L~~ 243 (339)
T PRK06959 214 -----PALLAALRDALGA--WTVSGPARHAVRAAFAD 243 (339)
T ss_pred -----HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCc
Confidence 5677777776543 34678899999999875
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=1.9e-30 Score=248.40 Aligned_cols=237 Identities=17% Similarity=0.220 Sum_probs=181.3
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.++|||++|.+ +.. .+.. +.+++.... . ..+.|++..| ++||+++++++ +. .+++|++ |+|++
T Consensus 19 ~~~i~l~~~~~-~~~---~~~~-~~~a~~~~~--~-~~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i~~--~~G~~ 81 (346)
T TIGR01141 19 KEVIKLNSNEN-PFG---PPPK-AKEALRAEA--D-KLHRYPDPDP-AELKQALADYY-GV-----DPEQILL--GNGSD 81 (346)
T ss_pred CceEEccCCCC-CCC---CCHH-HHHHHHHhH--H-HhhcCCCCCH-HHHHHHHHHHh-Cc-----ChHHEEE--cCCHH
Confidence 47999999998 332 2233 344433332 1 1256877766 89999999996 32 2678999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++..+ +..++.+||+|++++|+|+.|..+++..|++++.+++ +++ +.+|++.+++.+...++ ++++++||||
T Consensus 82 ~~l~~~--~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~~~-~~~d~~~l~~~~~~~~~---~v~l~~p~Np 154 (346)
T TIGR01141 82 EIIELL--IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPL-DED-GQLDLEDILVAIDDKPK---LVFLCSPNNP 154 (346)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecc-CCC-CCCCHHHHHHhcCCCCC---EEEEeCCCCC
Confidence 999774 3445689999999999999999999999999999998 543 66899999997654333 7778899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.++++++++.|+ +++++|+||+|.+|..+. + ....+ ....++|++.||||.||++|+|+||++ ++
T Consensus 155 tG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~--~~~~~-~~~~~~i~~~S~sK~~g~~G~r~G~~~--~~ 225 (346)
T TIGR01141 155 TGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---S--TLPLL-AEYPNLIVLRTLSKAFGLAGLRIGYAI--AN 225 (346)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---c--HHHHH-hhCCCEEEEehhhHhhhchhhhceeee--cC
Confidence 999999999999999987 799999999999887542 1 11222 233579999999999999999999988 66
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+.++++++..... .+.+.++|.++..++++
T Consensus 226 -----~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ 255 (346)
T TIGR01141 226 -----AEIIDALNKVRAP--FNLSRLAQAAAIAALRD 255 (346)
T ss_pred -----HHHHHHHHhccCC--CCCCHHHHHHHHHHhCC
Confidence 4566666655432 45678888888887764
No 105
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.3e-30 Score=248.52 Aligned_cols=204 Identities=15% Similarity=0.155 Sum_probs=156.2
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
+.|+|+..++ |+.. ......| |..-..+||++++++. |.. +++|++ |+|+++
T Consensus 17 ~~i~l~~Nen------p~~~-------------~~~~~~Y-p~~~~~~lr~~ia~~~-~~~-----~~~I~i--t~Gs~~ 68 (332)
T PRK06425 17 RIIDFSANIN------DFMD-------------IGDISIY-PEISYTDIEDQIKIYT-QGL-----KIKVLI--GPGLTH 68 (332)
T ss_pred CEEEeccccC------CCcC-------------hhhcccC-cCcCHHHHHHHHHHHh-CCC-----cceEEE--CCCHHH
Confidence 6899999877 2210 0112347 4445789999999995 442 778998 999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC
Q 018820 154 SLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT 233 (350)
Q Consensus 154 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT 233 (350)
++.++.. .+.+|+ |++++|+|+.|..+++..|++++.+|+ ++ +++|.+.+++ .+++ +++++||||||
T Consensus 69 ~l~~~~~---~~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~-~~--~~~~~~~l~~---~~~k---~v~l~nP~NPT 135 (332)
T PRK06425 69 FIYRLLS---YINVGN-IIIVEPNFNEYKGYAFTHGIRISALPF-NL--INNNPEILNN---YNFD---LIFIVSPDNPL 135 (332)
T ss_pred HHHHHHH---HhCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeC-Cc--ccCcHHHHhh---cCCC---EEEEeCCCCCc
Confidence 9988543 356765 667799999999999999999999998 43 3456544432 1222 67778999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 234 G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
|.+++.+++++|+++|++++++||+||+|.+|.+++ . .+...+....+++|+++||||.||+||+|+||++ ++
T Consensus 136 G~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~--~--~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v--~~- 208 (332)
T PRK06425 136 GNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR--A--EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIA--TD- 208 (332)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc--c--hhHHHHhccCCCEEEEeecHHhcCCchhhheeee--cC-
Confidence 999999999999999999999999999999998752 1 2333333344689999999999999999999988 87
Q ss_pred hhHHHHHHHHHHHhhc
Q 018820 314 ADVAGRVESQVKLVIR 329 (350)
Q Consensus 314 ~~~~~~~~~~l~~~~~ 329 (350)
+.+++.+.+...
T Consensus 209 ----~~li~~l~~~~~ 220 (332)
T PRK06425 209 ----DYNMKISRKITE 220 (332)
T ss_pred ----HHHHHHHHHcCC
Confidence 566766666443
No 106
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=3.8e-30 Score=246.85 Aligned_cols=229 Identities=17% Similarity=0.141 Sum_probs=168.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
..++.+||++|.+ +.. +.+.+++++.... .. ...|++..|.++||+++++++ +. ++++|++ |+|
T Consensus 20 ~~~~~~~l~~~~~-~~~----~~~~~~~~~~~~~--~~-~~~Y~~~~g~~~lr~aia~~~-~~-----~~~~I~i--t~G 83 (349)
T PRK07908 20 AGPGLLDFAVNVR-HDT----PPEWLRERLAARL--GD-LAAYPSTEDERRARAAVAARH-GR-----TPDEVLL--LAG 83 (349)
T ss_pred CCCCeEEecCCCC-CCC----CCHHHHHHHHHHh--hH-hhcCCCccchHHHHHHHHHHh-Cc-----ChhhEEE--CCC
Confidence 4678999999987 322 2344455444433 11 356988899999999999995 42 3789999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.+++. +.+| .++++.|+|..+...++..|++++.+|+ +++ +++|++.+ +++++ +++++|||
T Consensus 84 a~~al~~~~~----l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~-~~~-~~~d~~~l----~~~~~---~i~l~np~ 149 (349)
T PRK07908 84 AAEGFALLAR----LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVL-DPP-FRLDPAAV----PDDAD---LVVIGNPT 149 (349)
T ss_pred HHHHHHHHHh----cCCC-eEEEeCCCChHHHHHHHHcCCEEEeecc-Ccc-cCcChhHh----ccCCC---EEEEcCCC
Confidence 9999988442 4564 5778899999999999999999999998 543 77888744 33333 77889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++.+ +|+ ++.++|+||+|.+|..+. ..++... ..+++|+++||||.||++|+|+||++
T Consensus 150 NPTG~~~~~~~l~~---l~~-~~~~iIvDe~y~~~~~~~----~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~-- 217 (349)
T PRK07908 150 NPTSVLHPAEQLLA---LRR-PGRILVVDEAFADAVPGE----PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYAL-- 217 (349)
T ss_pred CCCCCCcCHHHHHH---HHh-cCCEEEEECcchhhccCC----ccccccc--cCCCEEEEeecccccCCccceeeeee--
Confidence 99999999887655 454 477888899999986542 1222221 23579999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +++++++...... .+.+.+.+.++..+++
T Consensus 218 ~~-----~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~ 248 (349)
T PRK07908 218 GA-----PDVLARLTRGRAH--WPVGTLQLEAIAACCA 248 (349)
T ss_pred cC-----HHHHHHHHhcCCC--CCccHHHHHHHHHHhc
Confidence 76 5566666655443 3455667777777665
No 107
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=2.2e-29 Score=242.38 Aligned_cols=236 Identities=17% Similarity=0.171 Sum_probs=174.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++|+|++|.+ +. + +.+.+.++..... .. ...|++..+ ++||+++|+++ +.+ +++|++ .|+|+
T Consensus 33 ~~~~i~l~~~~~-~~-~---~~~~~~~~~~~~~--~~-~~~y~~~~~-~~lr~~ia~~~-~~~-----~~~i~~-~~~Ga 96 (361)
T PRK00950 33 PESIIKLGSNEN-PL-G---PSPKAVEAIEKEL--SK-IHRYPEPDA-PELREALSKYT-GVP-----VENIIV-GGDGM 96 (361)
T ss_pred ccceEEccCCCC-CC-C---CCHHHHHHHHHHH--Hh-hcCCCCCCH-HHHHHHHHHHh-CCC-----HHHEEE-eCCCH
Confidence 347999999987 22 2 2344444444333 11 245866554 99999999985 432 667765 24788
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. ...+.+||.|++++|+|+.|...++..|++++.++. + +++++|++.+++.+..+++ ++++++|||
T Consensus 97 ~~~i~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~---~v~~~~p~n 169 (361)
T PRK00950 97 DEVIDTLM--RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR-E-EDFSLDVDSVLNAITEKTK---VIFLCTPNN 169 (361)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec-C-CCCCcCHHHHHHHhccCCC---EEEEeCCCC
Confidence 88887743 344679999999999999999999999999999985 4 3478999999998865433 677789999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++.+| |+++|+++|+||+|.+|... + ...+....+++++++||||.||++|+|+||++ +
T Consensus 170 ptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~----~---~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~--~ 237 (361)
T PRK00950 170 PTGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY----D---YTPLALEYDNLIIGRTFSKVFGLAGLRIGYGF--V 237 (361)
T ss_pred CCCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc----c---hHHHHHhcCCEEEEEeehHhhcCchhhcchhc--C
Confidence 99999999887665 55789999999999988622 1 12223344689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ++++..+.+.... .+.+.++|.++..+|++
T Consensus 238 ~-----~~~~~~~~~~~~~--~~~~~~~~~~a~~~l~~ 268 (361)
T PRK00950 238 P-----EWLIDYYMRAKTP--FSLTRLSQAAAIAALSD 268 (361)
T ss_pred C-----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC
Confidence 7 5666666665543 34678888888887764
No 108
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.96 E-value=7.9e-28 Score=225.46 Aligned_cols=224 Identities=20% Similarity=0.239 Sum_probs=181.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHh-CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc
Q 018820 110 VKEYLPIVGLAEFNKLSAKLIL-GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA 188 (350)
Q Consensus 110 ~~~Y~p~~G~~~lr~aia~~~~-g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~ 188 (350)
..+|++.+|.++|+..+.++.. -...+..+.-+|.+ |+|.|.+++.+ +..++++||.|+++.++|+......+..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~--l~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKV--LRTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHH--HHHhhcCCCceEEecccchHHHHhcccc
Confidence 4679999999999999988632 22334444557888 99999999984 4556899999999999999999999999
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcC-------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccC
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSA-------PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-------~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
|+++++|++ |. .++++|.|++.+... ++..+++.+++.|||||.+++.|++++|.++|++||++||+||.
T Consensus 169 gv~~ipv~m-d~--~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKM-DQ--DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEeccc-cC--CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 999999988 54 579999999998763 33568999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC------CCchHHHHHHhh----------cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 262 YQGFASGSL------DSDAQSVRMFVA----------DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 262 Y~~~~~~~~------~~~~~~~~~~~~----------~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
|.-+.++.. +..+.+.+.|.. -..|||...||||.++ ||+|+||+. ++ ..+++++.
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it--~~-----~~~l~ril 317 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWIT--GN-----SLFLKRIL 317 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEee--cC-----HHHHHHHh
Confidence 998887631 111112123321 1239999999999998 999999988 77 45666666
Q ss_pred HhhcccccCCChhHHHHHHHHhc
Q 018820 326 LVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 326 ~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.......++|+.+.|.++-.+|+
T Consensus 318 ~~ae~~t~~pSg~sq~iv~a~l~ 340 (472)
T KOG0634|consen 318 DLAEVATSGPSGFSQGIVYAMLK 340 (472)
T ss_pred hhcceeecCcccccHHHHHHHHH
Confidence 67777778899999999988875
No 109
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=4.4e-25 Score=209.87 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=181.8
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
|||+.|.+.. . ..+.+..+..... .......|.+..|..++++.+++++..........+++++ ++|+++++
T Consensus 1 ~~~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~ 72 (350)
T cd00609 1 IDLSIGEPDF-P----PPPEVLEALAAAA-LRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEAL 72 (350)
T ss_pred CCCCCCCCCC-C----CCHHHHHHHHHHh-hccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHH
Confidence 5788998832 2 2333333322211 2334567888999999999999996543221223667888 99999999
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCH--HHHHHHhhcCCCCcEEEEecCCCCCC
Q 018820 156 RVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF--QGLLEDLGSAPAGAIVLLHACAHNPT 233 (350)
Q Consensus 156 ~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~--~~l~~~l~~~~~~~~~l~~~~p~NPT 233 (350)
..+ +.....+||+|++++|+|.++..+++..|.+++.++. ++++ ..+. +.+++.... +..++++++|+|||
T Consensus 73 ~~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~-~~~~~~~~~~~~~~~---~~~~v~i~~~~~~t 145 (350)
T cd00609 73 SLL--LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPL-DEEG-GFLLDLELLEAAKTP---KTKLLYLNNPNNPT 145 (350)
T ss_pred HHH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEec-cccc-CCccCHHHHHhhcCc---cceEEEEECCCCCC
Confidence 874 3444678999999999999999999999999999998 4333 2332 444443322 23366667799999
Q ss_pred CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 234 G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
|.+++.+++++|+++|+++|+++|+|++|.++.+++. . .............++++|++|.++++|.|+||++ +++
T Consensus 146 G~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~--~-~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~--~~~ 220 (350)
T cd00609 146 GAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE--P-PPALALLDAYERVIVLRSFSKTFGLPGLRIGYLI--APP 220 (350)
T ss_pred CcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc--c-cccccCcCccCcEEEEeecccccCCcccceEEEe--cCH
Confidence 9999999999999999999999999999999887541 1 1111122334478999999999999999999988 763
Q ss_pred hhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 314 ADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 314 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
. .+.+.++...+....+++..++.++..+|..
T Consensus 221 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 252 (350)
T cd00609 221 E----ELLERLKKLLPYTTSGPSTLSQAAAAAALDD 252 (350)
T ss_pred H----HHHHHHHHHHHhcccCCChHHHHHHHHHHhC
Confidence 2 5666666666666678899999888887764
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=9.3e-25 Score=216.18 Aligned_cols=250 Identities=10% Similarity=0.061 Sum_probs=174.4
Q ss_pred CCCCeEEeeccccc-CCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYR-TEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~-~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.++|+|++|.|. |...+.....+..+..+.+. .+. ..|++..|.++||+++++++ +. +++++ |+
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~--~g~-~~Y~~~~g~~~Lreaia~~~-~~-------~~vv~--t~ 100 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMM--RGD-EAYAGSRSYYRLEDAVKDIF-GY-------PYTIP--TH 100 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHH--hCC-cccCCCCCHHHHHHHHHHHh-CC-------CcEEE--CC
Confidence 67899999999983 33332222233344444443 232 46999999999999999985 42 46777 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC------CCCC--CCHHHHHHHhhcCC-CC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP------ATRG--LNFQGLLEDLGSAP-AG 220 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~------~~~~--~d~~~l~~~l~~~~-~~ 220 (350)
|+++|+.+ .+.++++||| |++++|.|..|...++.+|++++.+++... +.|. +|++.+++.+.+.. ++
T Consensus 101 ggt~A~~~--~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~ 177 (460)
T PRK13238 101 QGRAAEQI--LFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAEN 177 (460)
T ss_pred CHHHHHHH--HHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCc
Confidence 99999998 4566789999 999999999999999999999999998321 2344 99999999997532 34
Q ss_pred cEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCC--CCCCCCCC---CchHHHHHHhhcCCcEEEEeccc
Q 018820 221 AIVLLHACAHNPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQ--GFASGSLD---SDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 221 ~~~l~~~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~--~~~~~~~~---~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
..++++++|||||| .+++.+++++|.++|++||+++|+|+++. ...+.... ....++..+ ++.+.|++
T Consensus 178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~ 251 (460)
T PRK13238 178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYA 251 (460)
T ss_pred eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccC
Confidence 56888999999998 99999999999999999999999999663 23221100 000122111 34568999
Q ss_pred cccCccCccee-----EEEEeeCChhHHHHHHHHHHHhh----cc-cccCCChhHHHHHHHHh
Q 018820 295 KNLGLYGERVG-----ALSIVCKTADVAGRVESQVKLVI----RP-MYSNPPIHGASIVAAIL 347 (350)
Q Consensus 295 K~~gl~G~RvG-----~l~~v~~~~~~~~~~~~~l~~~~----~~-~~~~~~~~~q~i~~~~L 347 (350)
|.+.+.|||+| +++ ++++.+ +.++++... .. ++.+.+...|.+++..|
T Consensus 252 D~~~~Sg~K~g~~~~GG~i-~~~d~~----l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l 309 (460)
T PRK13238 252 DGLTMSAKKDAMVNIGGLL-CFRDED----LFTECRTLCILYEGFPTYGGLAGRDMEALAVGL 309 (460)
T ss_pred cEEEEecccCCCCcceeEE-EcChHH----HHHHhhhcccccCCcccccCcHHHHHHHHHhhH
Confidence 99999999984 333 144443 333344432 22 44555555565555433
No 111
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=3.1e-24 Score=198.67 Aligned_cols=250 Identities=19% Similarity=0.224 Sum_probs=194.7
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCE
Q 018820 91 LVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRT 170 (350)
Q Consensus 91 ~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~ 170 (350)
++.+++++|...+....+....|+..+|++-.|+.+|+++..+|..+..+++|.+ |.|++.|++.+..++. ..+++-
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~~-~~~~~G 163 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLLI-AGKKTG 163 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHHh-cCCCCc
Confidence 4677788887777644445677999999999999999998777766677999999 9999999987544442 346788
Q ss_pred EEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC--CCcEEEEecCCCCCCCCCCCHHHHHHHHHH
Q 018820 171 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP--AGAIVLLHACAHNPTGVDPTLQQWERIRQL 248 (350)
Q Consensus 171 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~ 248 (350)
|++|-|.|+-|...+...|...++|-+.++.+|.+|.++++..+.++. -++.++++-||.||||.+++++-+++|+.+
T Consensus 164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~f 243 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICF 243 (475)
T ss_pred eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHH
Confidence 999999999999999999999999887444569999999998887642 234577778899999999999999999999
Q ss_pred HHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-hhcC------CcEEEEecccccc-CccCcceeEEEEeeCChhHHHHH
Q 018820 249 MRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF-VADG------GECFIAQSYAKNL-GLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 249 ~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~-~~~~------~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
|.+++++++.||+|++-.|.+. ....++... .+.+ ..++.++|.||.+ |-.|.|-||+-++.-+ +++
T Consensus 244 a~~~~l~llaDEVYQ~Nvy~~~-skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~----prv 318 (475)
T KOG0258|consen 244 AAEEGLVLLADEVYQDNVYTTG-SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD----PRV 318 (475)
T ss_pred HHHcCeEEechHHHHhhccCCC-cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC----hhH
Confidence 9999999999999999887642 222333332 2222 2588999999995 7799999999965544 355
Q ss_pred HHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 321 ESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.+++.++.. .-.+++.-+|.++..+++-
T Consensus 319 ~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnP 346 (475)
T KOG0258|consen 319 KQQIKKLAS-IKLCPQVSGQKLVDLVVNP 346 (475)
T ss_pred HHHHHHHHh-hhhcCCccchhhhceecCC
Confidence 555555443 2346788888877666553
No 112
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=4.7e-23 Score=185.24 Aligned_cols=267 Identities=19% Similarity=0.191 Sum_probs=184.4
Q ss_pred ccccchHhhccC-CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhCCC
Q 018820 59 PILGVTVAYNKD-PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS---RVKEYLPIVGLAEFNKLSAKLILGAD 134 (350)
Q Consensus 59 ~i~~~~~~~~~~-~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~---~~~~Y~p~~G~~~lr~aia~~~~g~~ 134 (350)
.|..+++.+... ..+..|+|+-|+|.- - |...+..+.....+.++.. ...+|..++|...|.+++++.+....
T Consensus 15 Gi~~lMdDl~d~Lrt~g~imLggGNPa~-i--Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~y 91 (417)
T COG3977 15 GITQLMDDLNDGLRTPGAIMLGGGNPAR-I--PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREY 91 (417)
T ss_pred hHHHHHHHHHhhccCCCceeeCCCCccc-C--hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHh
Confidence 455666655421 356699999998832 1 3445555555555553321 24569999999999999999954444
Q ss_pred CCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCC--CEEEEc-CCCCCChHHHHHHcCCeEEEEEe-e--cCCC---CC
Q 018820 135 SPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQ--RTIYIP-QPTWGNHPKVFTLAGLSVKSYRY-Y--DPAT---RG 204 (350)
Q Consensus 135 ~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~g--d~Vlv~-~P~y~~~~~~~~~~G~~~~~v~~-~--~~~~---~~ 204 (350)
...+.++||.+ |+|++.++..++-+++-- ..| +.|++| .|-|-+|..+.-.-.. .+.+.- . .+.+ ..
T Consensus 92 gwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~-fVs~kP~iel~~~g~FKY~ 168 (417)
T COG3977 92 GWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL-FVSAKPNIELLPAGQFKYH 168 (417)
T ss_pred CCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc-eeeccCCcccccccceeec
Confidence 44466999999 999999997654444322 234 457765 8999999754321110 111110 0 1111 45
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
.|++.+.-. ....++..+.|.||||.++|.+|+.+|.++|++||+.+|.|.+|.--..+-...|+.+ --.
T Consensus 169 vDF~~l~i~-----e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~-----~w~ 238 (417)
T COG3977 169 VDFEHLHIG-----ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP-----LWN 238 (417)
T ss_pred cCHHHcccc-----cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc-----cCC
Confidence 676665432 2334788899999999999999999999999999999999999975333211112111 134
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++|.|.|+|| .|+||.|+|.++ +. +++++.+..+.......|..+++++++.+++.
T Consensus 239 ~NiilC~SLSK-~GLPG~R~GIiI--an-----e~viqaitnmn~iisLap~~~G~Aia~~mie~ 295 (417)
T COG3977 239 ENIILCMSLSK-LGLPGSRCGIII--AN-----EKVIQAITNMNGIISLAPGRMGPAIAAEMIES 295 (417)
T ss_pred CCEEEEeehhh-cCCCCcceeEEE--cc-----HHHHHHHHhccceeeecCCCccHHHHHHHhhc
Confidence 69999999999 799999999766 66 67888888887777778999999999998864
No 113
>PRK07049 methionine gamma-lyase; Validated
Probab=99.89 E-value=1.2e-21 Score=192.69 Aligned_cols=197 Identities=16% Similarity=0.150 Sum_probs=148.9
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~ 191 (350)
..-...|++++|++. +. +++++ +.||++|+.. .+.+++.+||.|++++|+|+.|...+ +..|++
T Consensus 82 ~Pt~~~Le~~lA~le-g~-------~~~iv--~~sG~~Ai~~--~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~ 149 (427)
T PRK07049 82 HPNSEIVEDRLAVYE-GA-------ESAAL--FSSGMSAIAT--TLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVG 149 (427)
T ss_pred CcCHHHHHHHHHHHh-CC-------CcEEE--EccHHHHHHH--HHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcE
Confidence 344578999999985 42 35666 8899999877 55677889999999999999997764 467988
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh---cCcEEEEccCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSA--PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS---KGLLPFFDSAYQGFA 266 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~---~~~~ii~DeaY~~~~ 266 (350)
++.++. +.|++.+++.+.+. ..+..++++++|+||||.+++.+++.+|++.|+. +++++|+||+|..+.
T Consensus 150 ~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~ 223 (427)
T PRK07049 150 AVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPV 223 (427)
T ss_pred EEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccc
Confidence 777753 25677787766432 1234588889999999999999999999998754 689999999997654
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
... ++ .. ...|+++||||.+| .+|+|+||++ ++ +++.+++.........+.+.+.|.++.+
T Consensus 224 ~~~------pl----~~-g~divv~S~SK~~gG~~glr~G~vv--~~-----~~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 224 FQK------PL----EH-GADLSVYSLTKYVGGHSDLVAGAVL--GR-----KALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred cCC------cc----cc-CCCEEEEcCceeecCCCCcEEEEEE--CC-----HHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 321 11 11 24588889999998 6999999977 65 4566666666655566788889988877
Q ss_pred Hhc
Q 018820 346 ILR 348 (350)
Q Consensus 346 ~L~ 348 (350)
.|+
T Consensus 286 ~L~ 288 (427)
T PRK07049 286 SLE 288 (427)
T ss_pred CCC
Confidence 664
No 114
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=7.9e-23 Score=180.60 Aligned_cols=190 Identities=18% Similarity=0.175 Sum_probs=153.4
Q ss_pred CCccCCcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 136 PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 136 ~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
.++.+++|.+ +.|+.+.+.+ .+.+.+.|| ++|+.-.|+|..|.--+..++++++.+|+ ++ +|.+|.|++.+.+
T Consensus 82 kpLt~dnic~--GvGsDE~ID~--iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl-~p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 82 KPLTSDNICV--GVGSDELIDL--IIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPL-NP-DFSLNVDAIAEVL 155 (375)
T ss_pred CCCCccceEE--ecCcHHHHHH--HHhheecCCccceeecCCcceeEEEEeecCCceEEEecC-CC-CccccHHHHHHHH
Confidence 3466899999 9999999988 455668899 89999999999998888889999999999 55 5899999999998
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
+.... ..++++++|+||||..+..+++++|++.-. +.+++.||+|-+|.-.. +...+.....+++++++||
T Consensus 156 ~~ds~-iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 156 ELDSK-IKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred hcccc-ceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhh
Confidence 76433 447888999999999999999999987543 67788899999997421 2223455668999999999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+||++|+|+||.. .+ ..+...+..+..+ .|.+..+..++...|+|
T Consensus 227 KsfGLAGiRvG~~~--~~-----~~ia~iln~~KaP--YNiS~~~s~~AL~Als~ 272 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGA--FP-----LSIAEILNRAKAP--YNISVAGSVAALAALSD 272 (375)
T ss_pred hhcCcceeEeeccc--cc-----HHHHHHHHhccCC--ccccchhHHHHHHhcCc
Confidence 99999999999977 66 5566666666654 35667777777777764
No 115
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=1.9e-21 Score=190.48 Aligned_cols=224 Identities=12% Similarity=0.096 Sum_probs=164.9
Q ss_pred CCCCeEEeeccccc-CCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYR-TEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~-~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+-+.+.|..|.+. |...+.....+..+..+.+. .+. ..|++..|.++|++++++++ |. +++++ |+
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~--~gd-~~Y~~~~g~~~Leeaia~~~-g~-------~~vv~--t~ 75 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMM--LGD-EAYAGSKSFYDLEDAVQDLF-GF-------KHIIP--TH 75 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHH--hCC-CccCCCCCHHHHHHHHHHHH-CC-------CeEEE--cC
Confidence 67789999999872 21111111233444455554 333 34999999999999999985 43 46777 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC---------CCCCCHHHHHHHhhcC-CC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA---------TRGLNFQGLLEDLGSA-PA 219 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~---------~~~~d~~~l~~~l~~~-~~ 219 (350)
||++|+.+ .+.+++.|||.| +++|+|..|...+...|++++.++. +++ .+.+|++.+++.+.++ ++
T Consensus 76 ~Gt~Al~l--a~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i-~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~ 151 (431)
T cd00617 76 QGRGAENI--LFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVI-DEAHDAQELIPFKGNIDVAKLEKLIDEVGAE 151 (431)
T ss_pred CHHHHHHH--HHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEec-ccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence 99999998 456678899987 6999999999999999999999998 432 2459999999999865 23
Q ss_pred CcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhcCcEEEEccCCC--CCCC-----CCCCCchHHHHHHhhcCCcEEEEe
Q 018820 220 GAIVLLHACAHNPT-GVDPTLQQWERIRQLMRSKGLLPFFDSAYQ--GFAS-----GSLDSDAQSVRMFVADGGECFIAQ 291 (350)
Q Consensus 220 ~~~~l~~~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~--~~~~-----~~~~~~~~~~~~~~~~~~~vi~~~ 291 (350)
+..++++++||||| |..++.+++++|.++|++||+++|+|++-. ...+ ++. .+ .++.. .++.+.
T Consensus 152 ~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~-~~-~si~e------i~~e~~ 223 (431)
T cd00617 152 NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGY-RD-KSIAE------IAREMF 223 (431)
T ss_pred CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccc-cC-CCHHH------HHHHhh
Confidence 34578889999998 999999999999999999999999999932 1111 110 01 12221 245678
Q ss_pred ccccccCccCcc------eeEEEEeeCChhHHHHHH
Q 018820 292 SYAKNLGLYGER------VGALSIVCKTADVAGRVE 321 (350)
Q Consensus 292 S~SK~~gl~G~R------vG~l~~v~~~~~~~~~~~ 321 (350)
||||.+.+.||| .||++ +++++..+++.
T Consensus 224 s~sd~~~mS~~K~~~~~~GG~i~--~~d~~l~~~~~ 257 (431)
T cd00617 224 SYADGCTMSAKKDGLVNIGGFLA--LRDDELYEEAR 257 (431)
T ss_pred ccCCEEEEEeecCCCCccceEEE--eCcHHHHHHHH
Confidence 999999999999 55877 77654544443
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.86 E-value=3.9e-20 Score=179.95 Aligned_cols=224 Identities=13% Similarity=0.036 Sum_probs=146.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.+.|||+.|.+.+.. . .+.+.++.......... ...|....|.+++|+++++++-..... +++|++ |.
T Consensus 40 ~g~~~i~l~~~~~~~~~---~-~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--ts 110 (397)
T PRK06939 40 DGKEVINFCANNYLGLA---N-HPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SS 110 (397)
T ss_pred CCCeEEEeeccCccccC---C-CHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cC
Confidence 46679999999853422 2 33344433333312111 112333578888888888774322111 456776 77
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEe
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLH 226 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~ 226 (350)
| ++++..+ +.+.+.+||.|++++|+|+.+...++..|.+++.++. .|++.+++.+++. ..+.++++.
T Consensus 111 G-~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 111 C-FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred h-HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence 6 6677663 4556789999999999999999999999998877754 4788888877641 123456777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
...+||||.. +++++|+++|+++|+++|+||+|.....+. ... .....+.......+++.||||.++ |+|+||
T Consensus 181 ~~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~-~~~-~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~ 253 (397)
T PRK06939 181 DGVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGE-NGR-GTVEHFGVMDRVDIITGTLGKALG--GASGGY 253 (397)
T ss_pred ecCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCC-CCC-CHHHHcCCCCCCcEEEEECHHHhC--ccCceE
Confidence 6679999974 457888999999999999999996322221 011 112211111235699999999984 679999
Q ss_pred EEEeeCChhHHHHHHHHHHHh
Q 018820 307 LSIVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~ 327 (350)
++ ++ +++++.+...
T Consensus 254 v~--~~-----~~~~~~l~~~ 267 (397)
T PRK06939 254 TA--GR-----KEVIDWLRQR 267 (397)
T ss_pred EE--eC-----HHHHHHHHHh
Confidence 87 76 4555555544
No 117
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=5.4e-20 Score=178.53 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=150.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHH-HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKA-EQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a-~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.+.|||+.|.+.+... .+.+.++ .+.+.+.......|.+..|.+++|+++++++...... ++.+++ ++
T Consensus 31 ~g~~~id~~~~~~~g~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~s 101 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFAD----HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QS 101 (385)
T ss_pred CCceEEEeeccCccCCCC----CHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--Cc
Confidence 467799999987523222 3334443 3333311122345778899999999999985322111 455665 66
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHAC 228 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~ 228 (350)
| ++++.. .+...+.+||.|++++|+|+.+...+...|++++.++ .+|++.+++.+++.. ++..+++++.
T Consensus 102 G-~~a~~~--a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~ 171 (385)
T TIGR01825 102 G-FNTNQG--VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDG 171 (385)
T ss_pred H-HHHHHH--HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEec
Confidence 6 556655 3345578999999999999999888888888876653 368888888776532 2355778888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
++||||...+ +++|.++|++||+++|+||+|..+.++.... .....+....+.++++.||||.++++| ||++
T Consensus 172 v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~ 243 (385)
T TIGR01825 172 VFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAA 243 (385)
T ss_pred CCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcCCCcCCcEEEEeccHHhhcCC---CEEe
Confidence 8999999887 5778999999999999999998765542101 111112112357899999999998665 9876
Q ss_pred EeeCChhHHHHHHHHHHHh
Q 018820 309 IVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~ 327 (350)
++ +++.+.+...
T Consensus 244 --~~-----~~~~~~~~~~ 255 (385)
T TIGR01825 244 --GH-----KELIEYLKNR 255 (385)
T ss_pred --cC-----HHHHHHHHHh
Confidence 65 4455555444
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.86 E-value=6.9e-20 Score=175.54 Aligned_cols=221 Identities=15% Similarity=0.065 Sum_probs=145.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+.+.|||+.|+|. |.+.+..+++.+.+.+.........|....| ..+++++++++. +. +++|++
T Consensus 14 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~~i~~- 82 (360)
T TIGR00858 14 DGRRLLNFSSNDYL---GLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK-GT------EAALLF- 82 (360)
T ss_pred CCceEEecccCCcc---cCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CCEEEE-
Confidence 46679999999652 2122233333333333210111111222223 456888888875 42 456776
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~ 225 (350)
++|. +++..+ +.+.+.+||.|++++|+|+.+...++..|++++.++. +|++.+++.++..+ .+..+++
T Consensus 83 -~~G~-~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSGY-LANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -CchH-HHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 7764 444432 3345689999999999999999999999999887764 58889998887543 2345888
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-hhcCCcEEEEeccccccCccCcce
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF-VADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
+++++||||...+ +++|.++|+++|+++|+||+|..+.++. ........+ .....++|++.||||.|+++|
T Consensus 152 ~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g--- 223 (360)
T TIGR00858 152 TDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGE--DGRGTLEHFGLKPEPVDIQVGTLSKALGSYG--- 223 (360)
T ss_pred EeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCC--CCCchHHhcCCCccCCcEEEEechhhhhccC---
Confidence 8999999998766 5778899999999999999998765542 111111111 112357999999999999766
Q ss_pred eEEEEeeCChhHHHHHHHHHHHhh
Q 018820 305 GALSIVCKTADVAGRVESQVKLVI 328 (350)
Q Consensus 305 G~l~~v~~~~~~~~~~~~~l~~~~ 328 (350)
||++ ++ +++.+.+....
T Consensus 224 G~~~--~~-----~~~~~~~~~~~ 240 (360)
T TIGR00858 224 AYVA--GS-----QALIDYLINRA 240 (360)
T ss_pred cEEE--cC-----HHHHHHHHHhC
Confidence 9877 66 45555554433
No 119
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.85 E-value=1.7e-19 Score=175.53 Aligned_cols=217 Identities=15% Similarity=0.084 Sum_probs=149.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC---Cc----HHHHHHHHHHHhCCCCCCccCCcE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV---GL----AEFNKLSAKLILGADSPAIRENRV 143 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~---G~----~~lr~aia~~~~g~~~~~~~~~~v 143 (350)
.+.+.|||+.|+|.+.. ....+++++.+.+. +.. ..|++.. |. .+|++++|+++ |. +++
T Consensus 36 ~g~~~i~~~~~~~lg~~---~~~~v~~~~~~~~~-~~~--~~~~~s~~~~G~~~~~~~le~~ia~~~-g~-------~~~ 101 (393)
T TIGR01822 36 DGREVLNFCANNYLGLS---SHPDLIQAAKDALD-EHG--FGMSSVRFICGTQDIHKELEAKIAAFL-GT-------EDT 101 (393)
T ss_pred CCceEEEeeCCCccccC---CCHHHHHHHHHHHH-HhC--CCCCCcCcccCChHHHHHHHHHHHHHh-CC-------CcE
Confidence 35679999999874332 22445555555554 111 2465655 76 88999999985 43 356
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCC
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAG 220 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~ 220 (350)
++ ++|+++|+.. .+.+++.+||.|++++|+|+.+...++..+.+.+.++ ..|++.+++.+++. ..+
T Consensus 102 ii--~~~~~~a~~~--~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 102 IL--YASCFDANGG--LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred EE--ECchHHHHHH--HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCC
Confidence 66 7888999886 4456678999999999999999988888887764432 36899999888752 113
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-cCCcEEEEeccccccCc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-DGGECFIAQSYAKNLGL 299 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl 299 (350)
.+++++..++||||.+.+ +++|+++|++||+++|+||+|..-..+. .......... .....+++.||||.+
T Consensus 171 ~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~---~~~~~~~~~~~~~~~di~~~s~sK~l-- 242 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGP---TGRGSHELCGVMGRVDIITGTLGKAL-- 242 (393)
T ss_pred ceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCC---CCCchHHhcCCCCCCeEEEEEChHHh--
Confidence 557778889999999876 6788999999999999999995322221 1011111111 123568999999986
Q ss_pred cCcceeEEEEeeCChhHHHHHHHHHHHh
Q 018820 300 YGERVGALSIVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 300 ~G~RvG~l~~v~~~~~~~~~~~~~l~~~ 327 (350)
.|+|+||++ ++ +.+.+.+...
T Consensus 243 ~g~r~G~~~--~~-----~~~~~~l~~~ 263 (393)
T TIGR01822 243 GGASGGFTT--AR-----KEVVELLRQR 263 (393)
T ss_pred hCCCcEEEE--eC-----HHHHHHHHHh
Confidence 479999977 66 4555555543
No 120
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=2.3e-19 Score=175.27 Aligned_cols=192 Identities=19% Similarity=0.153 Sum_probs=139.2
Q ss_pred CC--CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----H
Q 018820 113 YL--PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----T 186 (350)
Q Consensus 113 Y~--p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~ 186 (350)
|. +..+..+|++++|++. |. + ++++ ++||++|+.. .+.+.+.+||+|++++|.|+.+...+ +
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~-g~------~-~~l~--~~sG~~Ai~~--al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~ 125 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLE-GG------E-AAVV--AASGMGAISS--SLWSALKAGDHVVASDTLYGCTFALLNHGLT 125 (400)
T ss_pred ccCCCCccHHHHHHHHHHHh-CC------C-cEEE--EcCHHHHHHH--HHHHHhCCCCEEEEecCccchHHHHHHHHHh
Confidence 55 7778999999999995 32 2 4555 8999999877 45566889999999999998766544 6
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCC
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQG 264 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~ 264 (350)
..|++++.++. .|++.+++.+.++++ ++++++|+||||.+.+ +++|+++|+++ ++++|+|++|..
T Consensus 126 ~~G~~v~~vd~-------~d~e~l~~~i~~~tk---lI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 126 RYGVEVTFVDT-------SNLEEVRNALKANTK---VVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred hCCeEEEEECC-------CCHHHHHHHhccCCe---EEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 68998888865 278899998876544 8888999999999887 66778888886 999999999987
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHh--hcccccCCChhHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLV--IRPMYSNPPIHGAS 341 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~ 341 (350)
..... +. .. ..-|++.|+||.++.+|+|+ ||++ ++ ++ +.++++.. ........+.+.+.
T Consensus 193 ~~~~~------~l----~~-g~Divv~S~sK~l~g~g~~~gG~v~--~~-~~----~~~~l~~~~~~~~~g~~l~p~~a~ 254 (400)
T PRK06234 193 PYIQR------PL----QL-GADVVVHSATKYLNGHGDVIAGFVV--GK-EE----FINQVKLFGIKDMTGSVIGPFEAF 254 (400)
T ss_pred hhcCC------ch----hh-CCcEEEeeccccccCCCCceeEEEE--ec-HH----HHHHHHHHHHHHhcCCCCCHHHHH
Confidence 65431 11 11 23488999999999999987 8866 65 33 33333321 11122345566665
Q ss_pred HHHHHh
Q 018820 342 IVAAIL 347 (350)
Q Consensus 342 i~~~~L 347 (350)
++..-|
T Consensus 255 l~~~~l 260 (400)
T PRK06234 255 LIIRGM 260 (400)
T ss_pred HHHhcc
Confidence 555444
No 121
>PRK10534 L-threonine aldolase; Provisional
Probab=99.84 E-value=4.4e-20 Score=175.87 Aligned_cols=232 Identities=14% Similarity=0.038 Sum_probs=145.9
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
|+|+...+ |.+.+.+.+++.... .. ...|+|..+..+|+++++++. |. + .+++ +.||++++
T Consensus 2 ~~~~~~~~------~~p~~~~~~a~~~~~--~~-~~~Y~~~~~~~~L~~~la~~~-g~------~-~~~v--~~~g~~a~ 62 (333)
T PRK10534 2 IDLRSDTV------TRPSRAMLEAMMAAP--VG-DDVYGDDPTVNALQDYAAELS-GK------E-AALF--LPTGTQAN 62 (333)
T ss_pred cccccccC------CCCCHHHHHHHHhcc--CC-CcccCCCHHHHHHHHHHHHHh-CC------C-eEEE--eCchHHHH
Confidence 55666554 235677777765533 23 356988888999999999984 53 2 3345 77888887
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCCC-hHHH-HHHcC-CeEEEEEeecCCCCCCCHHHHHHHhhcCC---CCcEEEEecCC
Q 018820 156 RVGAEFLARHYHQRTIYIPQPTWGN-HPKV-FTLAG-LSVKSYRYYDPATRGLNFQGLLEDLGSAP---AGAIVLLHACA 229 (350)
Q Consensus 156 ~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~l~~~~p 229 (350)
.+ .+++.+.+||.|+++.|+|.. |... ....| ++++.++. + +++.+|++.+++.+.+.+ .+..+++++||
T Consensus 63 ~~--~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 63 LV--ALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA-A-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred HH--HHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC-C-CCCCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 66 344567899999999888752 4321 23333 67777776 4 357899999999885421 02347777765
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE-EE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA-LS 308 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~-l~ 308 (350)
+ ||.+++.+++++|+++|+++++++++||+|....... .+ .....+....+.++ .||||.||+ ++|| ++
T Consensus 139 ~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~--~~-~~~~~~~~~~~~~~--~s~SK~~~~---~~G~~~~ 208 (333)
T PRK10534 139 H--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVA--YG-CELKEITQYCDSFT--ICLSKGLGT---PVGSLLV 208 (333)
T ss_pred C--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHH--cC-CCHHHHHhcCCEEE--EEeEcCCCC---cccceEE
Confidence 4 6999999999999999999999999999987221100 00 11122222112333 389998875 4885 44
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccC--CChhHHHHHHHHh
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSN--PPIHGASIVAAIL 347 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~i~~~~L 347 (350)
++ +++++.+.++......+ .....|.++...|
T Consensus 209 --~~-----~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l 242 (333)
T PRK10534 209 --GN-----RDYIKRARRWRKMTGGGMRQAGILAAAGLYAL 242 (333)
T ss_pred --cC-----HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHH
Confidence 44 44555555554432212 2234455544444
No 122
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=1.5e-19 Score=177.20 Aligned_cols=188 Identities=12% Similarity=0.155 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-----HcCC
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-----LAGL 190 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~G~ 190 (350)
..-..+|.+.+|++. |. +.+++ ++||++|+.+ .+++++.+||.|++++|.|+.+...+. ..|+
T Consensus 75 ~Pt~~~LE~~lA~l~-g~-------~~~l~--~~sG~~Ai~~--al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~ 142 (418)
T PLN02242 75 NPTVLNLGRQMAALE-GT-------EAAYC--TASGMSAISS--VLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNI 142 (418)
T ss_pred ChhHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHH--HHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCc
Confidence 344678888888874 43 34556 9999999988 455668899999999999998877653 4677
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. .|++.+++.+++. +..+|++++|+||||.++ ++++|+++|+++|+++|+|++|..+.++.
T Consensus 143 ~~~~~d~-------~d~e~l~~~i~~~--~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~- 209 (418)
T PLN02242 143 TTTFVDI-------TDLEAVKKAVVPG--KTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP- 209 (418)
T ss_pred eEEEcCC-------CCHHHHHHhcCcC--CCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH-
Confidence 7766544 3789999888653 133788899999999988 46788999999999999999998776431
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhc--ccccCCChhHHHHHHHH
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIR--PMYSNPPIHGASIVAAI 346 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~i~~~~ 346 (350)
. .+ ...|+++||||.++.+|+|+ ||++ ++ +.+++++..... ....+++...|.++..+
T Consensus 210 ------~-~~----g~divv~S~SK~l~g~g~~~gG~iv--~~-----~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~ 270 (418)
T PLN02242 210 ------A-RL----GADVVVHSISKFISGGADIIAGAVC--GP-----AELVNSMMDLHHGALMLLGPTMNPKVAFELS 270 (418)
T ss_pred ------H-Hc----CCcEEEEeCccccCCCCCceEEEEE--cC-----HHHHHHHHHHhhhhhhccCCCCCHHHHHHHH
Confidence 1 11 24588999999999999995 7766 55 345555554433 23344444455444433
No 123
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.83 E-value=3.5e-19 Score=169.52 Aligned_cols=224 Identities=15% Similarity=0.094 Sum_probs=149.3
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY 172 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl 172 (350)
.+.++++..+.. ... ..|.+..+..++++.+++++ | ++++++ +.||++++.++ +.+++.+||.|+
T Consensus 11 ~~~v~~a~~~~~--~~~-~~~~~~~~~~~l~~~~a~~~-g-------~~~~~~--~~~gt~a~~~~--~~~l~~~gd~v~ 75 (338)
T cd06502 11 TPEMLEAMAAAN--VGD-DVYGEDPTTAKLEARAAELF-G-------KEAALF--VPSGTAANQLA--LAAHTQPGGSVI 75 (338)
T ss_pred CHHHHHHHHhcc--cCC-cccCCCHHHHHHHHHHHHHh-C-------CCeEEE--ecCchHHHHHH--HHHhcCCCCeEE
Confidence 555666655432 111 35777778889999999885 4 234556 77888998773 445578999999
Q ss_pred EcCCCCCChHH---HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 173 IPQPTWGNHPK---VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP----AGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 173 v~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
+++|+|..+.. ..+..|++++.++. +. +.+|++.+++.+++.. .+..++++++|||| |..++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPG-EN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecC-CC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999875432 34568999999987 43 5799999999987521 13458889999998 667799999999
Q ss_pred HHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 246 RQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 246 ~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
+++|+++|+++|+||+|..+....... ...... .+..+ ++.|+||.|+++| |+++ ..+++ +++++.
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~-~~~d~-~~~s~sK~~~~~~---g~~~--~~~~~----~~~~~~ 217 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGV---ALKTYK-SGVDS-VSFCLSKGGGAPV---GAVV--VGNRD----FIARAR 217 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCC---CHHHHH-hcCCE-EEEeccccCCCcc---ceEE--ECCHH----HHHHHH
Confidence 999999999999999986442111001 111121 22344 5779999999887 6543 44544 444444
Q ss_pred Hhhcc--cccCCChhHHHHHHHHhcC
Q 018820 326 LVIRP--MYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 326 ~~~~~--~~~~~~~~~q~i~~~~L~~ 349 (350)
..... ...+.+.+.+.++...|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~a~~~~L~~ 243 (338)
T cd06502 218 RRRKQAGGGMRQSGFLAAAGLAALEN 243 (338)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHhcC
Confidence 33321 1123455666666666653
No 124
>PLN02721 threonine aldolase
Probab=99.83 E-value=5.7e-19 Score=169.12 Aligned_cols=210 Identities=16% Similarity=0.156 Sum_probs=136.3
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
.+++|+.+.+ + .+.+.+++++.... .....+.|.|. ..+|++++++++ +. + .+++ +.+|++
T Consensus 6 ~~~~~~~~~~-~-----~~~~~~~~a~~~~~-~~~~~~~~~~~--~~~l~~~la~~~-~~------~-~~~~--~~~Gs~ 66 (353)
T PLN02721 6 RVVDLRSDTV-T-----KPTDAMRAAMANAE-VDDDVLGYDPT--ALRLEEEMAKIF-GK------E-AALF--VPSGTM 66 (353)
T ss_pred hhhhhhcccc-c-----CCCHHHHHHHHhcc-CCCcccCCCHH--HHHHHHHHHHHh-CC------c-eeEE--ecCccH
Confidence 4678888888 3 23566666665432 12223434433 789999999996 43 1 2344 555666
Q ss_pred HHHHHHHHHHHhc-CCCEEEEcCCCCC-ChHH--HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC----CCCcEEEE
Q 018820 154 SLRVGAEFLARHY-HQRTIYIPQPTWG-NHPK--VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA----PAGAIVLL 225 (350)
Q Consensus 154 al~l~~~l~~~~~-~gd~Vlv~~P~y~-~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~l~ 225 (350)
+..+ .+.+... +||.|++++|+|. .|.. .+...|++++.+|. ++ ++.+|++.+++.+++. .++..+++
T Consensus 67 a~~~--~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 67 GNLI--SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN-NE-DGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHH--HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC-Cc-CCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 6544 3444466 8999999999975 3432 56788999999987 43 4568999999998732 01233555
Q ss_pred e-cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 226 H-ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~-~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
+ +.+|||||.+++.+++++|+++|+++|+++|+|++|......- .+ .....+....+. ++.||||.++. ++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~--~~-~~~~~~~~~~d~--~~~s~sK~l~~---~~ 214 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVA--LG-VPVHRLVKAADS--VSVCLSKGLGA---PV 214 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhh--hC-CCHHHHhhhCCE--EEEecccccCC---ce
Confidence 5 5578999999999999999999999999999999885321100 01 111222222222 34479998863 57
Q ss_pred eEEEEeeCChhH
Q 018820 305 GALSIVCKTADV 316 (350)
Q Consensus 305 G~l~~v~~~~~~ 316 (350)
||++ ..+++.
T Consensus 215 G~~~--~~~~~~ 224 (353)
T PLN02721 215 GSVI--VGSKSF 224 (353)
T ss_pred eeEE--ecCHHH
Confidence 8754 445443
No 125
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.83 E-value=7.7e-19 Score=170.07 Aligned_cols=246 Identities=15% Similarity=0.112 Sum_probs=153.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHH-HhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...|||..|...+.-|. ..+.+.++..+ +.+-......| +..-..+|.+.++++. | .+++++ ++|
T Consensus 26 g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~~~~--~~s 92 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS-G-------ADRVFF--CNS 92 (379)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC-C-------CCEEEE--eCC
Confidence 456899999854233332 22444444433 33111111224 3333456666666653 3 247888 999
Q ss_pred chhHHHHHHHHHHHh-c----CCCEEEEcCCCCCChHHHHHHcCCeEEE----EEeecCCCCC--CCHHHHHHHhhcCCC
Q 018820 151 GTGSLRVGAEFLARH-Y----HQRTIYIPQPTWGNHPKVFTLAGLSVKS----YRYYDPATRG--LNFQGLLEDLGSAPA 219 (350)
Q Consensus 151 ~~~al~l~~~l~~~~-~----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~~~~~~~--~d~~~l~~~l~~~~~ 219 (350)
|++++.++..++... . +||+|++++|+|..|.......+..... .++..+..+. .|++.+++.+.+++
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~- 171 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET- 171 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe-
Confidence 999998865443222 2 3799999999999887766655543321 2221111111 17899998886533
Q ss_pred CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 220 GAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
.+++++.++||+|.. ++.+++++|.++|+++++++|+||+|.+|.+.+ . ..+.... ....+++ +|||.++
T Consensus 172 --~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g--~-~~~~~~~-~~~~d~~---t~sK~~~ 242 (379)
T TIGR00707 172 --AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG--K-FFAYEHY-GIEPDII---TLAKGLG 242 (379)
T ss_pred --eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--h-hhhHHhc-CCCCCEE---EEccccc
Confidence 355665556777764 799999999999999999999999999886542 1 1111111 1223443 6899999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|+|+||++ ++ +++++.+.........+.+.++|.++...|+
T Consensus 243 -~G~riG~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~ 284 (379)
T TIGR00707 243 -GGVPIGATL--AK-----EEVAEAFTPGDHGSTFGGNPLACAAALAVLE 284 (379)
T ss_pred -CCcccEEEE--Ec-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999987 76 4566666654433344577888888876553
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=6.1e-19 Score=169.02 Aligned_cols=191 Identities=15% Similarity=0.141 Sum_probs=137.9
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc---CCCCCChHHHHHHcCCeEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP---QPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~---~P~y~~~~~~~~~~G~~~~~v 195 (350)
..+|++++|++. |.+ ++++++ ++|+++++.. .+.+++.+||.|+++ .|+|..|...++..|++++.+
T Consensus 56 ~~~Le~~lA~~~-g~~-----~e~ilv--~~gg~~a~~~--~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 56 EEKVQELGREHL-GGP-----EEKILV--FNRTSSAILA--TILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHc-CCC-----cceEEE--ECCHHHHHHH--HHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEecc
Confidence 456777777774 432 678999 9999999988 456678899999975 468888888899999876322
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
.|++.++. . ++ ..++++ +++||+|.+++.+++++|+++|+++|+++|+||+|..+..+.... .
T Consensus 126 ---------~~l~~l~~-~---~~-~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~--~ 188 (346)
T TIGR03576 126 ---------DELSELKK-I---DG-TSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ--P 188 (346)
T ss_pred ---------CCHHHHhh-C---cC-ceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCC--C
Confidence 23444322 1 12 224444 467999999999999999999999999999999999876431111 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+.. ..+.+ |++.|||| +++|+|+||++ ++ +.+++.+.+..+....+++.+.|.++...|++
T Consensus 189 ~~~---~~~~d-ivv~s~SK--alaG~r~G~v~--~~-----~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 189 PAL---DLGAD-LVVTSTDK--LMDGPRGGLLA--GR-----KELVDKIKSVGEQFGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred CHH---HcCCc-EEEeccch--hccccceEEEE--eC-----HHHHHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence 111 12234 55779999 67999999988 77 56778888877765555677788888777753
No 127
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.81 E-value=4.6e-18 Score=164.65 Aligned_cols=219 Identities=16% Similarity=0.069 Sum_probs=141.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHH-HHhhcCCCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQ-QLVNDRSRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~-~l~~~~~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
.+.+.|||+.|.+.... . .+.+.++.. .+.........|....| ..++++++++++ +. ++.++
T Consensus 37 ~g~~~id~~~~~~~g~~---~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~~i~- 104 (385)
T PRK05958 37 DGRRMLNFASNDYLGLA---R-HPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF-GA------ERALL- 104 (385)
T ss_pred CCceEEEeeCCCcccCC---C-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CcEEE-
Confidence 46789999998652211 1 233333333 33210101112333334 456666676664 31 44454
Q ss_pred EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 146 VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
+++|++++.. .+...+.+||.|++++|+|+.+...++..|++++.++. .|++.+++.++...+...+++
T Consensus 105 --~~~g~~~~~~--~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 105 --FSSGYAANLA--VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred --ECcHHHHHHH--HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEE
Confidence 4455566644 23345789999999999999999999999999988765 378889988875432345777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-hhcCCcEEEEeccccccCccCcce
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF-VADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
+..++||||...+ +++|+++|++||+++|+||+|..+.++..... ....+ .....++|++.||||.||++|
T Consensus 174 ~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G--- 245 (385)
T PRK05958 174 TESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRG--LAAEAGLAGEPDVILVGTLGKALGSSG--- 245 (385)
T ss_pred EEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCc--hHHhhCCCCCCceEEEEechhhcccCC---
Confidence 7789999997655 67889999999999999999976544310011 11111 122357899999999999777
Q ss_pred eEEEEeeCChhHHHHHHHHHHHh
Q 018820 305 GALSIVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 305 G~l~~v~~~~~~~~~~~~~l~~~ 327 (350)
||++ ++ +.+.+++...
T Consensus 246 g~~~--~~-----~~~~~~~~~~ 261 (385)
T PRK05958 246 AAVL--GS-----ETLIDYLINR 261 (385)
T ss_pred cEEE--cC-----HHHHHHHHHh
Confidence 8866 66 3455554433
No 128
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=2e-18 Score=168.23 Aligned_cols=247 Identities=13% Similarity=0.104 Sum_probs=157.1
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||..|.+...-|+ ..+.+.++..+...... +....+..++++++++++.... . .+++++ ++|
T Consensus 37 dg~~~iD~~~g~~~~~lG~--~~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~la~~l~~~~-~---~~~v~~--~~g 104 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGH--CHPKLVEAIQEQAAKLI----HTSNLYYIEPQEELAEKLVELS-G---MDKVFF--CNS 104 (396)
T ss_pred CCCEEEECCccHHhccCCC--CCHHHHHHHHHHHhhcc----ccccccCCHHHHHHHHHHHhhc-C---CCEEEE--CCC
Confidence 3556899998866333333 12445554444331111 1111223678888888864431 2 478999 999
Q ss_pred chhHHHHHHHHHHHhcC-----CCEEEEcCCCCCChHHHHHHcCCeE-EEEEeecC--CCC----CCCHHHHHHHhhcCC
Q 018820 151 GTGSLRVGAEFLARHYH-----QRTIYIPQPTWGNHPKVFTLAGLSV-KSYRYYDP--ATR----GLNFQGLLEDLGSAP 218 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~-----gd~Vlv~~P~y~~~~~~~~~~G~~~-~~v~~~~~--~~~----~~d~~~l~~~l~~~~ 218 (350)
|++|+.++..+...... .++|++.+++|..+.......+... ...++ .+ +++ ..|++.+++.+..
T Consensus 105 g~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~i~~-- 181 (396)
T PRK02627 105 GAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF-EPLVEGFIYVPFNDIEALKAAITD-- 181 (396)
T ss_pred cHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC-CCCCCCceEeCCCCHHHHHHhcCC--
Confidence 99999886554322221 1789999999988865554333221 11111 11 111 1288999988853
Q ss_pred CCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 219 AGAIVLLHACAHNPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
+..++++..++|||| ..++++.+++|.++|++||+++|+||+|.+|.+.+ . ..+...+ ....++ .+|||.+
T Consensus 182 -~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g--~-~~~~~~~-~~~pdi---~t~sK~~ 253 (396)
T PRK02627 182 -KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG--K-LFAYQHY-GIEPDI---MTLAKGL 253 (396)
T ss_pred -CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC--c-eeeehhc-CCCCCE---EEEcchh
Confidence 234677777899999 68899999999999999999999999999986542 1 1111111 111233 3799999
Q ss_pred CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 298 GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 298 gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ +|+|+||++ ++ +++.+.+.........+.+.++|.++...|+
T Consensus 254 ~-~G~rig~~~--~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 254 G-GGVPIGAVL--AK-----EKVADVFTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred h-CCcccEEEE--Ec-----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9 999999988 77 4566655543333444678888888777764
No 129
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.80 E-value=7.3e-18 Score=164.57 Aligned_cols=204 Identities=21% Similarity=0.101 Sum_probs=139.5
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC-------CCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI-------VGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~-------~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
+.+.|..+.. . +.+.++ .++.............+.+. ..+.++|+++++++ |.. . +++|++
T Consensus 16 ~~iyld~a~~-~----~~p~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-~---~~~i~~- 83 (398)
T TIGR03392 16 GTVYLDSAAT-A----LKPQAV-IDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL-NAP-D---AENIVW- 83 (398)
T ss_pred CeEEeeCccc-c----CCCHHH-HHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh-CCC-C---CCeEEE-
Confidence 5788887766 2 333444 44443333111111112222 23467999999885 432 1 578998
Q ss_pred ecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCC----hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 147 QCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGN----HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
|+|+++++.+++..+. .+.+||+|++++|.|+. +..+++..|++++.+|. +.+ +.+|++.+++.+.++++
T Consensus 84 -t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~-~~~~~~~l~~~i~~~t~- 159 (398)
T TIGR03392 84 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI-GAD-LLPDIRQLPELLTPRTR- 159 (398)
T ss_pred -eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec-CCC-CCcCHHHHHHHhccCce-
Confidence 9999999988543221 14689999999999865 44566788999999998 543 56899999998866543
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
++++++||||||.+.+. ++|+++|+++|+++++|++|...... -+ ... . .--+++.|++|.+|.+
T Consensus 160 --lv~i~~~~n~tG~~~~~---~~i~~~~~~~~~~~ivD~a~~~~~~~---~~---~~~---~-~~d~~~~s~~K~~gp~ 224 (398)
T TIGR03392 160 --ILALGQMSNVTGGCPDL---ARAITLAHQYGAVVVVDGAQGVVHGP---PD---VQA---L-DIDFYAFSGHKLYGPT 224 (398)
T ss_pred --EEEEECccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCCCC---CC---hhh---c-CCCEEEEecccccCCC
Confidence 78889999999999874 56889999999999999999643321 11 111 1 1235677888988865
Q ss_pred CcceeEEEEeeC
Q 018820 301 GERVGALSIVCK 312 (350)
Q Consensus 301 G~RvG~l~~v~~ 312 (350)
| +||++ .+
T Consensus 225 G--~G~l~--~~ 232 (398)
T TIGR03392 225 G--IGVLY--GK 232 (398)
T ss_pred c--eEEEE--Ec
Confidence 5 89987 65
No 130
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=6.5e-18 Score=164.04 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=134.6
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH-cCCeEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL-AGLSVK 193 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~~~ 193 (350)
+..-..+|+++++++. | .+++++ ++|+++|+.+ .+.+++.+||.|++++|+|......+.. .+....
T Consensus 49 ~~p~~~~le~~lA~l~-g-------~~~v~~--~~gg~~Ai~~--~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~ 116 (382)
T TIGR02080 49 GNPTRDLLQQALAELE-G-------GAGAVV--TNTGMSAIHL--VTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCF 116 (382)
T ss_pred CCchHHHHHHHHHHHh-C-------CCcEEE--EcCHHHHHHH--HHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCe
Confidence 3334678999999974 3 246777 9999999988 4456688999999999999865554432 222222
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.+...+ ..|++.+++.++++++ +|++++|+||||.+++. ++|+++|+++|+++|+|++|..+....
T Consensus 117 ~v~~~d----~~d~~~l~~ai~~~tk---lV~l~~p~NPtG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~~~---- 182 (382)
T TIGR02080 117 RVLFVD----QGDEQALRAALAQKPK---LVLIETPSNPLLRVVDI---AKICHLAKAVGAVVVVDNTFLSPALQN---- 182 (382)
T ss_pred EEEEEC----CCCHHHHHHhcCcCce---EEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 333322 2478899998876443 88899999999999985 567888999999999999997664321
Q ss_pred hHHHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
+.. + +. -++++|+||.++ .+|+|.|+++ +.+++ +.+++.........+.+.+.+.++.+
T Consensus 183 --pl~-~---ga-Divv~S~sK~l~G~~~~~~G~i~--~~~~~----~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 183 --PLA-L---GA-DLVLHSCTKYLNGHSDVIAGAVI--AKDPQ----VAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred --chh-h---CC-CEEEeecceeccCCCCceeEEEE--eCCHH----HHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 111 1 22 378899999985 5788999977 66554 34444444444455677777776544
No 131
>PLN02822 serine palmitoyltransferase
Probab=99.79 E-value=5e-18 Score=169.43 Aligned_cols=240 Identities=13% Similarity=0.057 Sum_probs=155.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-C---CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-R---SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~---~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+.+.|||+.|.+.+..++ ..+++++.+.+.+- . .....|++..+..+|++++++++ +. ++.|++
T Consensus 107 ~G~~~id~~s~~~lgl~~~---~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~-~~------~~~i~~- 175 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGN---EKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL-GT------PDSILY- 175 (481)
T ss_pred CCceEEEeECCCcCCCCCC---HHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh-CC------CCEEEE-
Confidence 3567899999987555444 33333333444310 1 11123777788999999999996 32 567887
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh---cC----CC
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG---SA----PA 219 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~---~~----~~ 219 (350)
+.|.+ ++.. .+.+..++||.|++....+..+...++..|.+++.++.. |.+.++..++ .. ++
T Consensus 176 -s~G~~-a~~s--ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 176 -SYGLS-TIFS--VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred -CCHHH-HHHH--HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence 77776 4433 445667899999987666666666777888899888762 3334443332 21 11
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-hcCCcEEEEeccccccC
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV-ADGGECFIAQSYAKNLG 298 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g 298 (350)
..+++++..++|+||.+++ +++|+++|++||+++|+||+|....+|.--+- ....+. ......|++.||||.||
T Consensus 245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G--~~e~~~v~~~~~dii~~s~sKalg 319 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG--LSEHFGVPIEKIDIITAAMGHALA 319 (481)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCC--hHHHcCCCCCCCeEEEecchhhhh
Confidence 2257888889999999999 68889999999999999999996665521011 111111 11234688999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhc-cccc-CCChhHHHHHHHHh
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIR-PMYS-NPPIHGASIVAAIL 347 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~q~i~~~~L 347 (350)
+.| ||++ ++ +++++.++.... .+++ +.|.+.+.++...|
T Consensus 320 ~~G---G~i~--g~-----~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL 360 (481)
T PLN02822 320 TEG---GFCT--GS-----ARVVDHQRLSSSGYVFSASLPPYLASAAITAI 360 (481)
T ss_pred hCC---eEEE--cC-----HHHHHHHHhcCCceeeccccCHHHHHHHHHHH
Confidence 999 9877 66 456665554333 3444 33555555554444
No 132
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.79 E-value=8.3e-18 Score=162.11 Aligned_cols=165 Identities=14% Similarity=0.102 Sum_probs=126.6
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..+|++.+++++ |. +++++ |+|+++++.++ +.+.+.+||+|+++.++|......++..|++++.++.
T Consensus 46 ~~~l~~~la~~~-g~-------~~i~~--~~g~t~al~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~- 112 (361)
T cd06452 46 IKDFHHDLAEFL-GM-------DEARV--TPGAREGKFAV--MHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPN- 112 (361)
T ss_pred HHHHHHHHHHHc-CC-------ceEEE--eCCHHHHHHHH--HHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEec-
Confidence 468888888874 43 47888 99999999874 4555789999999999877666678899999999998
Q ss_pred cCC-CCCCCHHHHHHHhhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 199 DPA-TRGLNFQGLLEDLGSAP----AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 199 ~~~-~~~~d~~~l~~~l~~~~----~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
+.+ ++.+|++.+++.+.+.. ++..++++++|+||||.. .++++|+++|+++|+++|+|++|..-...
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~~i~~~~~~~~~~vivD~a~~~g~~~----- 184 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAKKIAKVCHEYGVPLLLNGAYTVGRMP----- 184 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHHHHHHHHHHcCCeEEEECCcccCCcC-----
Confidence 544 36899999999886421 234578889999999976 45678899999999999999999742211
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
..... . ...+++.|++|.++ ++.|+||++ ++
T Consensus 185 -~~~~~---~-~~d~~~~s~~K~l~-~~~~~G~l~--~~ 215 (361)
T cd06452 185 -VSGKE---L-GADFIVGSGHKSMA-ASAPIGVLA--TT 215 (361)
T ss_pred -CCHHH---c-CCCEEEecCCcccc-CCCCeEEEE--EC
Confidence 11111 1 24588999999998 566999987 65
No 133
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1e-17 Score=162.75 Aligned_cols=192 Identities=17% Similarity=0.168 Sum_probs=138.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 190 (350)
+......|++++|++. |. + ++++ ++||++++.++ +.+++.+||+|++++|+|+.....+. ..|+
T Consensus 50 ~~pt~~~L~~~lA~l~-g~------~-~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 50 GNPTRDVVQRALAELE-GG------A-GAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCccHHHHHHHHHHHh-CC------C-eEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 4445688999999984 42 2 4666 99999999884 45668899999999999996444433 2334
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
++..+ + ..|++.+++.++++++ ++++++|+||||.+++. ++|.++|+++|+++|+|++|.......
T Consensus 118 ~v~~v---d----~~d~e~l~~~l~~~tk---lV~l~sP~NPtG~v~di---~~I~~ia~~~g~~vivDeay~~~~~~~- 183 (386)
T PRK08045 118 RVLFV---D----QGDEQALRAALAEKPK---LVLVESPSNPLLRVVDI---AKICHLAREAGAVSVVDNTFLSPALQN- 183 (386)
T ss_pred EEEEe---C----CCCHHHHHHhcccCCe---EEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 54443 2 2588999988865443 78889999999999984 577888899999999999998764321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+. ..+.. ++++|++|.++ ..+.+.|+++ +.+++ +.+++.........+.+.+.+.++.+-|+
T Consensus 184 -----pl----~~gaD-ivv~S~tK~l~G~~d~~~G~vi--~~~~~----~~~~l~~~~~~~g~~~~p~~~~l~~rgl~ 246 (386)
T PRK08045 184 -----PL----ALGAD-LVLHSCTKYLNGHSDVVAGVVI--AKDPD----VVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_pred -----ch----hhCCC-EEEeecceeccCCCCceeEEEE--eCcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence 22 11223 78999999985 5668899977 76554 44444444555566788888888777665
No 134
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=7.8e-18 Score=164.26 Aligned_cols=189 Identities=15% Similarity=0.159 Sum_probs=134.3
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~ 191 (350)
..-..+|++.++++. |. ++.++ +++|++|+.+ .+.+++.+||.|+++.|+|.....+ ++..|++
T Consensus 63 ~p~~~~le~~lA~l~-g~-------~~~i~--~ssG~~Ai~~--~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 63 NPTVQAFEEKVRILE-GA-------EAATA--FSTGMAAISN--TLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred ChHHHHHHHHHHHHh-CC-------CeEEE--eCChHHHHHH--HHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 334578999999985 42 23445 7777889887 4455678999999999999876543 4567888
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .|++.+++.++++++ ++++++|+||||.+++ +++|+++|+++|+++|+|++|..+....
T Consensus 131 v~~vd~-------~d~e~l~~~i~~~tk---lV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~-- 195 (398)
T PRK08249 131 VTLCET-------GDHEQIEAEIAKGCD---LLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN-- 195 (398)
T ss_pred EEEcCC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC--
Confidence 766543 588999998876544 8888999999999998 5567888999999999999998665321
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHH
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
+.. .+.. ++++|+||.++-+|.++|+++ +.+++ +.+++..+......+.+.+.+.++.+-
T Consensus 196 ----~l~----~~~D-ivv~S~sK~l~g~~~~~gG~v--v~~~~----l~~~l~~~~~~~g~~~s~~~a~l~l~~ 255 (398)
T PRK08249 196 ----PLA----LGAD-LVIHSATKFLSGHADALGGVV--CGSKE----LMEQVYHYREINGATMDPMSAYLILRG 255 (398)
T ss_pred ----chh----hCCC-EEeccCceecCCCCCceEEEE--ECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhC
Confidence 111 1122 677999999987898886555 44443 444444444444556677777665443
No 135
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.78 E-value=1.2e-17 Score=162.75 Aligned_cols=183 Identities=14% Similarity=0.164 Sum_probs=131.0
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~ 194 (350)
..+|++.++++. |. +++++ ++||++|+.+ .+.+++.+||.|+++++.|+.... .++..|++++.
T Consensus 63 ~~~le~~la~l~-g~-------~~~v~--~ssG~~Ai~~--al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 63 VTMFQERLAALE-GA-------EACVA--TASGMAAILA--VVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred HHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHH--HHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 567888888874 42 34666 8999999987 445667899999999999976554 45578999988
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.++++++ ++++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 131 vd~-------~d~~~l~~~i~~~tk---lV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----- 192 (390)
T PRK08133 131 VDL-------TDLDAWRAAVRPNTK---LFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----- 192 (390)
T ss_pred ECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 876 278889888876444 8888999999999986 5788999999999999999986544321
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIV 343 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~ 343 (350)
+. ..+. -+++.|+||.++.+|+|+|+++ +.+++.. .++....+.....++.+.+.++
T Consensus 193 -pl----~~g~-Divv~S~sK~~~g~g~~~GG~v--v~~~~~~----~~~~~~~~~~g~~~~~~~a~~~ 249 (390)
T PRK08133 193 -PL----KLGA-DVVIHSATKYLDGQGRVLGGAV--VGSKELM----EEVFGFLRTAGPTLSPFNAWVF 249 (390)
T ss_pred -ch----hhCC-cEEEeecceeecCCcceEeEEE--EcCHHHH----HHHHHHHHHhCCCCCHHHHHHH
Confidence 11 1122 3779999999998999996655 3444333 3333333333344555555544
No 136
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.78 E-value=1.9e-17 Score=158.26 Aligned_cols=164 Identities=17% Similarity=0.153 Sum_probs=116.6
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..++++++++++ +. ++ .++ +.+|++++.. .+.+.+.+||.|++++|+|+.+...++..|+++++++.
T Consensus 48 ~~~l~~~la~~~-~~------~~-~iv--~~sg~~a~~~--~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~- 114 (349)
T cd06454 48 HEELEEELAEFH-GK------EA-ALV--FSSGYAANDG--VLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH- 114 (349)
T ss_pred HHHHHHHHHHHh-CC------CC-EEE--eccHHHHHHH--HHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-
Confidence 467777777764 43 23 333 5566777765 34455689999999999999998888999999887754
Q ss_pred cCCCCCCCHHHHHHHhhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHH
Q 018820 199 DPATRGLNFQGLLEDLGSA--PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQS 276 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~--~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~ 276 (350)
+|.+.+++.+++. +.+.+++++++++||||...+ +++|+++|+++|+++|+|++|.....+. ... .
T Consensus 115 ------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~-~~~--~ 182 (349)
T cd06454 115 ------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGP-HGR--G 182 (349)
T ss_pred ------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCC-CCC--C
Confidence 4777888877653 234568888999999998765 6788999999999999999997432221 011 1
Q ss_pred HHHHh-hcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 277 VRMFV-ADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 277 ~~~~~-~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
...+. ......+++.|+||.++.+| ||++ .+
T Consensus 183 ~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~--~~ 214 (349)
T cd06454 183 VEEFGGLTDDVDIIMGTLGKAFGAVG---GYIA--GS 214 (349)
T ss_pred hhhhccccccCcEEEeechhhhcccC---CEEE--CC
Confidence 11111 12246899999999998655 8866 54
No 137
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=3.6e-17 Score=163.55 Aligned_cols=224 Identities=13% Similarity=0.068 Sum_probs=150.8
Q ss_pred CCCeEEeecccccCCCC-CccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 72 SPVKLNLGVGAYRTEEG-KPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~-~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
..+.+||+.-+|..... .+.+.+.+.+++++.... ......|+...+..+|++++|+++ |. ++.|++ +.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~-g~------~~ai~~--~~ 169 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV-GK------PAAIVF--GM 169 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh-CC------CcEEEE--CC
Confidence 45679999888844332 233456666666665411 122345888889999999999996 43 566776 66
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC----------CC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA----------PA 219 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----------~~ 219 (350)
|.. +... .+.+++.+||.|++.+|+|+.+...++..|++++.++. + |.+.+++.+++. +.
T Consensus 170 G~~-an~~--~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~-~------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 170 GYA-TNST--IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH-N------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred HHH-HHHH--HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeC-C------CHHHHHHHHHhhhhccccccccCC
Confidence 543 3333 34456789999999999999999999999999999886 1 445555554421 12
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-hcCCcEEEEeccccccC
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV-ADGGECFIAQSYAKNLG 298 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g 298 (350)
+++++++....|++|... ++++|+++|+++++++|+||+|.....+. ... .....+. ...+..|+++||||.||
T Consensus 240 ~k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~-~G~-g~~~~~~v~~~~~dI~~~SfSKs~g 314 (489)
T PLN02483 240 KKIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGK-TGR-GVCELLGVDPADVDIMMGTFTKSFG 314 (489)
T ss_pred ceEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCC-CCC-chHHhcCCCcccCcEEEEecchhcc
Confidence 244566555669999776 46778999999999999999997433331 011 1111121 12346799999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhc
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIR 329 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~ 329 (350)
+.| ||++ ++ +++++.+.....
T Consensus 315 ~~G---G~i~--~~-----~~li~~l~~~~~ 335 (489)
T PLN02483 315 SCG---GYIA--GS-----KELIQYLKRTCP 335 (489)
T ss_pred cCc---eEEE--cC-----HHHHHHHHHhCc
Confidence 877 9877 66 566776666543
No 138
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.78 E-value=1.7e-17 Score=162.01 Aligned_cols=190 Identities=14% Similarity=0.142 Sum_probs=133.0
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSV 192 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~ 192 (350)
.-..+|++.+|++. |.+ ...+ +.+|+.++.. .+++.+.+||+|++++|.|+.+...+ ...|+++
T Consensus 65 p~~~~Le~~lA~l~-G~~-------~~~~--~~sG~~Ai~~--~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v 132 (398)
T PRK07504 65 PTVDMFEKRMCALE-GAE-------DARA--TASGMAAVTA--AILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIES 132 (398)
T ss_pred chHHHHHHHHHHHh-CCC-------eeeE--ecCHHHHHHH--HHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEE
Confidence 34688999999984 432 2233 6678888865 44556789999999999999876554 3568887
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++ .+|++.+++.++++++ +|++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 133 ~~vd-------~~d~e~l~~ai~~~tk---lV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~--- 196 (398)
T PRK07504 133 TLVD-------GLDLDNWEKAVRPNTK---VFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK--- 196 (398)
T ss_pred EEEC-------CCCHHHHHHhcCcCce---EEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC---
Confidence 7764 2689999998875544 8889999999999997 6677888999999999999998654321
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. ..+ .-+++.|+||.++.+|+|+|+++ +.+++.+.+ .++...+.....++.+.+.++..-|
T Consensus 197 ---~~----~~g-aDivv~S~sK~l~g~g~~~GG~v--v~~~~~i~~---~~~~~~~~~g~~~s~~~A~~~l~~L 258 (398)
T PRK07504 197 ---PL----ELG-AHIVVYSATKHIDGQGRCLGGVV--LSDKAWIEE---HLQDYFRHTGPSLSPFNAWTLLKGL 258 (398)
T ss_pred ---ch----hhC-CCEEEeeccccccCCccceEEEE--EeCcHHHHH---HHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 11 112 34689999999998999998655 444433322 2333233333456666666554433
No 139
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=1.9e-17 Score=161.62 Aligned_cols=241 Identities=16% Similarity=0.129 Sum_probs=150.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.+.|||..|..-..-|+ . .+.+.++..+.... ......|....+ .+|.+.++++. +.. . .+++.+ ++
T Consensus 41 dg~~~lD~~s~~~~~~lG~-~-~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~-~~~-~---~~~v~~--~~ 110 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGH-A-HPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL-GAP-E---GGRVFF--CN 110 (398)
T ss_pred CCCEEEECCcCHhhccCCC-C-CHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC-CCC-C---CCEEEE--eC
Confidence 3566899988754233332 1 34444444433311 111234654333 46666666652 321 1 468998 99
Q ss_pred CchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHH-HcCC------------eEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 150 SGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFT-LAGL------------SVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
||++|+..+..+... +| +.|+..+++|..+..... ..|. ++..+|+ .|++.+++.+.
T Consensus 111 sgsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~ 181 (398)
T PRK03244 111 SGAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVD 181 (398)
T ss_pred chHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhc
Confidence 999999887554332 44 567777889987754333 2222 1222222 37888888774
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQ-WERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
. +..++++..++||||.++++++ +++|.++|++||+++|+||+|.+|...+ + ....... ....++ .+||
T Consensus 182 ~---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g--~-~~~~~~~-~~~pDi---~t~s 251 (398)
T PRK03244 182 D---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG--A-WFAHQHD-GVTPDV---VTLA 251 (398)
T ss_pred C---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc--h-HHhhhhh-CCCCCE---EEEc
Confidence 3 3447777888999999997665 9999999999999999999999875432 1 1111111 112233 3789
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
|.++ +|+|+||++ ++ +++.+.+.........+.+.+++.++...|+
T Consensus 252 K~l~-~G~~ig~~~--~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 297 (398)
T PRK03244 252 KGLG-GGLPIGACL--AF-----GPAADLLTPGLHGSTFGGNPVACAAALAVLD 297 (398)
T ss_pred hhhh-CCcccEEEE--Ec-----HHHHhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence 9999 999999988 76 4555555543333333567778887777754
No 140
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.9e-17 Score=161.91 Aligned_cols=188 Identities=15% Similarity=0.134 Sum_probs=131.1
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSV 192 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~ 192 (350)
.-..+|++.++++. |. +. .++ +++|+.|+.++ +.+.+.+||+|+++.|+|..... .++..|+++
T Consensus 65 p~~~~le~~lA~l~-g~------~~-~i~--~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v 132 (403)
T PRK07503 65 PTLALLEQRMASLE-GG------EA-AVA--LASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTV 132 (403)
T ss_pred chHHHHHHHHHHHh-CC------Cc-EEE--EcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEE
Confidence 34688999999874 43 22 334 67888898874 44567899999999999976433 345789988
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. .|++.+++.++++++ +|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 133 ~~vd~-------~d~~~l~~~i~~~tk---lV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~--- 196 (403)
T PRK07503 133 RHVDL-------TDPAALKAAISDKTR---MVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQR--- 196 (403)
T ss_pred EEeCC-------CCHHHHHHhcCccCc---EEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 88866 268889988866444 7788999999998886 5777888999999999999998654321
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh--hcccccCCChhHHHHHHHHh
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV--IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~i~~~~L 347 (350)
+.. .+ .-+++.|+||.++.+| .|.||++ . +++ +.++++.. ......+.+.+.+.++..-|
T Consensus 197 ---~l~----~g-~Di~v~S~tK~l~g~gd~~gG~v~--~-~~~----l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L 259 (403)
T PRK07503 197 ---PLE----LG-ADLVVHSATKYLGGHGDITAGLVV--G-GKA----LADRIRLEGLKDMTGAVMSPFDAFLLMRGL 259 (403)
T ss_pred ---chh----hC-CCEEEccccccccCCCceeEEEEE--c-CHH----HHHHHHhhhHHhCcCCCCCHHHHHHHHcCc
Confidence 221 11 2388999999999776 5677655 4 443 33333321 22233556677776665544
No 141
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=2.6e-17 Score=160.24 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=130.9
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 190 (350)
+.....+|++++|++. |. +..++ +.+|++|+.+ .+.+++.+||+|++++|+|......+. ..|+
T Consensus 59 ~~p~~~~Le~~lA~~~-g~------~~~i~---~~sG~~Ai~~--~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALE-GG------AYGRA---FSSGMAATDC--LLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHh-CC------CceEE---eCCHHHHHHH--HHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 4567889999999985 43 22344 5667899988 445668899999999999985444333 3577
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. .|++.+++.+.++++ +|++++|+||||.. .++++|+++|+++|+++|+|++|.......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~~~tk---lV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAITPRTK---LIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcCcCCe---EEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 7766554 488999998876444 88899999999976 457788999999999999999998654321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+.. .+. -+++.|+||.++.+| .+.||++ +++++..+ .+...........+.+.+.++..-|
T Consensus 193 -----p~~----~ga-Divv~S~sK~l~g~~~~~gG~vv--~~~~~l~~----~~~~~~~~~g~~~s~~~a~l~~~~L 254 (388)
T PRK07811 193 -----PLA----LGA-DVVVHSTTKYIGGHSDVVGGALV--TNDEELDE----AFAFLQNGAGAVPGPFDAYLTLRGL 254 (388)
T ss_pred -----chh----hCC-cEEEecCceeecCCCCcEEEEEE--ECCHHHHH----HHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 121 111 288999999998665 4679877 76654333 3333332223344555555544433
No 142
>PRK06460 hypothetical protein; Provisional
Probab=99.77 E-value=1.9e-17 Score=160.57 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=124.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC----ChHHHHHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG----NHPKVFTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~----~~~~~~~~~G~~ 191 (350)
.....+|++++|++. |. +..++ +.+|++++.. .+.+++.+||+|++++|.|+ .|...++..|++
T Consensus 44 ~p~~~~L~~~lA~l~-g~------~~~v~---~~sG~~ai~~--~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 44 NPTVLELTKKIVELE-NA------EMGVA---FSSGMGAIST--TALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CccHHHHHHHHHHHh-CC------CcEEE---eCCHHHHHHH--HHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 456789999999985 43 23444 4556788877 34556789999999986554 455667788999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. + +.+.+++.++.+ ..++++++||||||.+++.+ +|+++|+++|+++|+|++|..+...
T Consensus 112 v~~~~~-~------~~~~l~~~~~~~---tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~--- 175 (376)
T PRK06460 112 VDASNP-G------SDNIIEKAKSKR---YDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ--- 175 (376)
T ss_pred EEEECC-C------CHHHHHHhcCCC---ceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC---
Confidence 887765 2 122333333322 34888899999999999976 5688889999999999999764321
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCc-cCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHH
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGL-YGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl-~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i 342 (350)
.+ + .. ...+++.|+||.++- .|.|+||++ ++ +++++++.........+.+...+.+
T Consensus 176 ---~~---l-~~-~~divv~S~sK~l~G~~~~~~G~~~--~~-----~~l~~~l~~~~~~~g~~~~~~~a~~ 232 (376)
T PRK06460 176 ---KP---L-EL-GADIVVHSASKFLAGHNDVIAGLAA--GY-----GKLLNVIDQMRRTLGTSLDPHAAYL 232 (376)
T ss_pred ---Ch---h-hc-CCCEEEeecceeccCCCCceEEEEe--cC-----HHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 11 1 11 246889999999852 236799876 65 4556666655554444555554444
No 143
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.77 E-value=4.3e-17 Score=159.31 Aligned_cols=165 Identities=22% Similarity=0.166 Sum_probs=123.5
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCC----hHHHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGN----HPKVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~ 192 (350)
..++|+.+++++ |.. . +++|++ |+|+++++.+++..+. .+.+||+|++++|.|+. +....+..|+++
T Consensus 65 ~~~~r~~la~~~-g~~-~---~~~i~~--~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 137 (401)
T PRK10874 65 YEAAREQVAQLL-NAP-D---AKNIVW--TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV 137 (401)
T ss_pred HHHHHHHHHHHc-CCC-C---CCEEEE--ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE
Confidence 567889998875 431 1 678999 9999999988543332 14689999999999864 455567889999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. +. ++.+|++.+++.+.++++ ++++++|+||||...+. ++|+++|+++|+++|+|++|...... -
T Consensus 138 ~~v~~-~~-~~~~d~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~---~~i~~l~~~~g~~~ivD~a~~~g~~~---~ 206 (401)
T PRK10874 138 VKLPL-GA-DRLPDVDLLPELITPRTR---ILALGQMSNVTGGCPDL---ARAITLAHQAGMVVMVDGAQGAVHFP---A 206 (401)
T ss_pred EEEec-CC-CCcCCHHHHHHhcCcCcE---EEEEeCCcccccCcCCH---HHHHHHHHHcCCEEEEECCccccccc---C
Confidence 99998 44 457899999999865443 88889999999999875 57788899999999999998532211 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+ +.. . .--+++.|++|.+|.+| +||++ ..
T Consensus 207 ~---~~~---~-~~d~~~~s~~K~~gp~G--~G~l~--~~ 235 (401)
T PRK10874 207 D---VQA---L-DIDFYAFSGHKLYGPTG--IGVLY--GK 235 (401)
T ss_pred C---chh---c-CCCEEEEecccccCCCc--cEEEE--Ec
Confidence 1 111 1 13466799999888666 58877 55
No 144
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.77 E-value=3.8e-17 Score=160.20 Aligned_cols=239 Identities=15% Similarity=0.057 Sum_probs=143.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHH-HhhcC---CCCCC-CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDR---SRVKE-YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~---~~~~~-Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
.+.++|+..+|.... ..+.++++... +..-. ..... |....-..+|++.++++. |. ++.|++
T Consensus 46 ~~~~~~~sn~yl~l~----~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~-g~------~~~i~~-- 112 (410)
T PRK13392 46 RRVTIWCSNDYLGMG----QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH-GK------ESALLF-- 112 (410)
T ss_pred ceEEEEECCCccCCC----CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh-CC------CCEEEE--
Confidence 457888887774322 23444444333 32100 00111 222224678999999985 43 456665
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-CCCcEEEEe
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-PAGAIVLLH 226 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~l~~ 226 (350)
++| +++...+...+....+|+.|++..+.|..+...++..|.++..++. .|.+.+++.++.. +++..++++
T Consensus 113 ~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 113 TSG-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred CcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence 655 5555443222222347898888776666666677788988766543 1455566666532 234558889
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE-EEEeccccccCccCccee
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC-FIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RvG 305 (350)
++|+||||.+++ +++|.++|+++++++|+||+|....++. .. ..........+++ ++++||||.||++| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~--~g-~g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGA--RG-GGIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCC--CC-CchhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999987 6777889999999999999998333332 11 1111111111233 88899999999998 8
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhccc-cc-CCChhHHHHHHHHhc
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIRPM-YS-NPPIHGASIVAAILR 348 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~q~i~~~~L~ 348 (350)
|++ ++ +++++.+++..... ++ +.+...+.++...|+
T Consensus 256 ~~~--~~-----~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~ 293 (410)
T PRK13392 256 YIA--AS-----ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIR 293 (410)
T ss_pred hhh--cC-----HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHH
Confidence 876 65 45566555555432 22 334455655555543
No 145
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.77 E-value=2.8e-17 Score=159.08 Aligned_cols=178 Identities=16% Similarity=0.117 Sum_probs=130.4
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..++++.+|+++ |. +.+.+ ++|+++++.. .+.+++.+||.|++..+.|......++..|++++.+|..
T Consensus 53 ~~~~~e~lA~~~-g~-------~~~~i--~~g~~~a~~~--~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFL-GM-------DEARV--THGAREGKFA--VMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHh-CC-------CceEE--ECChHHHHHH--HHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 467888888884 43 24556 8999999987 445567899999998887544446678999999999973
Q ss_pred cCCCCCCCHHHHHHHhhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 199 DPATRGLNFQGLLEDLGSAP----AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~----~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
.++++.+|++.+++.+++.+ .+..++++++|+||||...+ +++|+++|+++|+++|+||+|.....+ .+
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~---~~- 193 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP---VS- 193 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC---CC-
Confidence 33457899999999986421 13457888999999998776 456788999999999999999865322 11
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhc
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIR 329 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~ 329 (350)
.. ..+ .-++++||||.++ +|.|+||++ ++ +++++.+....+
T Consensus 194 --~~---~~~-~di~v~s~sK~~~-~~g~~G~l~--~~-----~~~i~~l~~~~~ 234 (370)
T TIGR02539 194 --AK---EIG-ADFIVGSGHKSMA-ASGPCGVLG--MS-----EEWEDIVLRKSR 234 (370)
T ss_pred --HH---HcC-CCEEEeeCccccc-CCCCEEEEE--EC-----HHHHhhhccccc
Confidence 11 122 3356699999999 678999987 76 456666655443
No 146
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.77 E-value=3.3e-17 Score=153.24 Aligned_cols=220 Identities=16% Similarity=0.218 Sum_probs=134.1
Q ss_pred CCCCC-CCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH---Hhc-C----------CCEEEE
Q 018820 109 RVKEY-LPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA---RHY-H----------QRTIYI 173 (350)
Q Consensus 109 ~~~~Y-~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~---~~~-~----------gd~Vlv 173 (350)
+..+| +-..|+++.|+.+++++ |.+ +++|++ |+..+|.+.-..+. +.. + .-+.++
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll-gv~-----~~~viv----~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLC 129 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL-GVP-----PENVIV----GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLC 129 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH-TS------GGGEEE-----SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEE
T ss_pred cccCCCCccCChHHHHHHHHHHh-CCC-----HHHEEE----eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEe
Confidence 34679 88999999999999985 543 678876 34444433211111 111 1 246899
Q ss_pred cCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHH-HHhc
Q 018820 174 PQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQL-MRSK 252 (350)
Q Consensus 174 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~-~~~~ 252 (350)
|.|+|..|..+++..|++.++||+ .++ |+|.|.+++.+.+.+..+.+..++--.||||++++.|..++++++ ....
T Consensus 130 PvPGYDRHFai~E~~Giemi~VpM-~~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 130 PVPGYDRHFAITEHFGIEMIPVPM-TED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp EES--HHHHHHHHHCT-EEEEEEE-ETT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred cCCCchHHHHHHHhhCcEEEecCC-CCC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 999999999999999999999999 553 699999999998777778899999999999999999999999998 4468
Q ss_pred CcEEEEccCCCCCCC-CCCCCch--HHHHHHhh--cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh
Q 018820 253 GLLPFFDSAYQGFAS-GSLDSDA--QSVRMFVA--DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 253 ~~~ii~DeaY~~~~~-~~~~~~~--~~~~~~~~--~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~ 327 (350)
|+.|+.|+||.-... ++.+.+. .-+....+ ..++++.+.|.||.. +||-+|+++. + +++.++.+.++
T Consensus 207 DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~a--a-S~~Nl~~~~~~---- 278 (425)
T PF12897_consen 207 DFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFA--A-SEANLAWIKKH---- 278 (425)
T ss_dssp T-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEE--E--HHHHHHHHHH----
T ss_pred CeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeee--c-CHHHHHHHHHH----
Confidence 999999999986444 2211221 12222222 345899999999975 6999999755 4 44444444443
Q ss_pred hcccccCCChhHHHHHHHHhcC
Q 018820 328 IRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 328 ~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
......++.-+.|.--.++|.|
T Consensus 279 ~~~~tIgpdKvNQLRHvrff~d 300 (425)
T PF12897_consen 279 LSVQTIGPDKVNQLRHVRFFKD 300 (425)
T ss_dssp HHHH-S---HHHHHHHHHHHHS
T ss_pred hcCceeCccHHHHHHHHHHhcC
Confidence 3333455666777665555544
No 147
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.77 E-value=2.4e-17 Score=161.02 Aligned_cols=206 Identities=18% Similarity=0.219 Sum_probs=138.4
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhh-c----CCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN-D----RSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVT 144 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~-~----~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~ 144 (350)
.+.++|..|... . .+.|+++...... . ......|....+.++++++++++ ++|.+ ..+|.
T Consensus 19 ~~~~~~~~~~~~------~-~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-----~~~v~ 86 (402)
T cd00378 19 RETLELIASENF------T-SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE-----YANVQ 86 (402)
T ss_pred HhCeeeeccCCc------C-CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC-----ceeee
Confidence 458999888652 2 4556665543221 0 11123366667778888865544 45543 23444
Q ss_pred EEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-----HHHcCCeEEEEEeecCC--CCCCCHHHHHHHhhc-
Q 018820 145 TVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-----FTLAGLSVKSYRYYDPA--TRGLNFQGLLEDLGS- 216 (350)
Q Consensus 145 ~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-----~~~~G~~~~~v~~~~~~--~~~~d~~~l~~~l~~- 216 (350)
+ + ||++|+.+ .+.+++.+||+|++++|+|+.+... ++..|.+++.+++ +.+ ++.+|++.+++.+..
T Consensus 87 ~--~-sgt~a~~~--~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~id~~~l~~~i~~~ 160 (402)
T cd00378 87 P--H-SGSQANLA--VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY-GVDPETGLIDYDALEKMALEF 160 (402)
T ss_pred c--C-CcHHHHHH--HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecC-CcCcccCCcCHHHHHHHHHhC
Confidence 3 4 56889887 4456678999999999999877544 5667888877776 433 688999999998853
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC-CCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY-QGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
+++ ++++++|+||+. .++++|+++|+++|+++|+|++| .++.+.+ ..... + . +.. +++.||||
T Consensus 161 ~~~---~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g--~~~~~---~-~-~~d-v~~~s~sK 224 (402)
T cd00378 161 KPK---LIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGG--VFPNP---L-P-GAD-VVTTTTHK 224 (402)
T ss_pred CCC---EEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcc--cCCCc---c-c-CCc-EEEecccc
Confidence 333 677788888753 24788999999999999999994 5555432 11011 1 1 223 67999999
Q ss_pred ccCccCcceeEEEEeeCChhH
Q 018820 296 NLGLYGERVGALSIVCKTADV 316 (350)
Q Consensus 296 ~~gl~G~RvG~l~~v~~~~~~ 316 (350)
.+ +|+|.||++ +++++.
T Consensus 225 ~l--~G~~gg~i~--~~~~~~ 241 (402)
T cd00378 225 TL--RGPRGGLIL--TRKGEL 241 (402)
T ss_pred CC--CCCCceEEE--eccHHH
Confidence 76 899999988 765333
No 148
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.76 E-value=5.3e-17 Score=159.90 Aligned_cols=248 Identities=17% Similarity=0.112 Sum_probs=156.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|.....-|. .+..+++++.+++. ... +-+.+..+..+|+++++++..+ .++|.+ ++|
T Consensus 46 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~--~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~s 112 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALE--RGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNS 112 (423)
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHH--hCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCC
Confidence 4567899988864222232 22444444444444 222 2133567889999999997422 257888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH---cCCeEEEEEeec-------CCC---CCCCHHHHHHHhhcC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL---AGLSVKSYRYYD-------PAT---RGLNFQGLLEDLGSA 217 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~~-------~~~---~~~d~~~l~~~l~~~ 217 (350)
|++|+..+..+......+++|+..+|+|.++...+.. .|.....++... +.. ...|++.+++.++..
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 192 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY 192 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc
Confidence 9999988655433344568999999999997543321 111111111100 000 012788999888743
Q ss_pred CCC-cEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 218 PAG-AIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 218 ~~~-~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
..+ .++++-+.|+| +|.+++ ++.+++|.++|++||+++|+||+|.+|.++. . .....+ .....+ -+|||
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~--~--~~~~~~-~~~pDi---~t~sK 263 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL--G--GAQEYF-GVEPDL---TTLGK 263 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc--c--hhHHHh-CCCcch---hhhhh
Confidence 333 44555579999 798887 6999999999999999999999999997642 1 112222 111232 37999
Q ss_pred ccCccCcceeEEEEeeCChhHHHHHHHHHHH---hhcccccCCChhHHHHHHHHhc
Q 018820 296 NLGLYGERVGALSIVCKTADVAGRVESQVKL---VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 296 ~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.++ +|+|+||++ ++ +.+.+.+.. .......+.+.+++.++...|+
T Consensus 264 ~l~-~G~pig~v~--~~-----~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 264 IIG-GGLPVGAFG--GR-----REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred hhc-CCCceeeee--EH-----HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence 999 999999988 76 566665542 1222233567777777655553
No 149
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=3.7e-17 Score=159.82 Aligned_cols=188 Identities=16% Similarity=0.179 Sum_probs=132.2
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC----hHHHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN----HPKVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~ 194 (350)
..+|++.+|++. |. ++.++ +.+|++++.+ .+.+++.+||.|+++.|+|.. +...++..|++++.
T Consensus 62 ~~~Le~~lA~l~-g~------~~~v~---~~sG~~Ai~~--~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~ 129 (405)
T PRK08776 62 RDLLGEALAELE-GG------AGGVI---TATGMGAINL--VLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALIT 129 (405)
T ss_pred HHHHHHHHHHHh-CC------CceEE---EcCHHHHHHH--HHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEE
Confidence 467888888863 42 34555 5666899987 445668899999999999987 44445567888887
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.++.+++ ++++++||||||.+. ++++|+++|+++|+++|+|++|..-..-
T Consensus 130 v~~-------~d~~~l~~~i~~~tk---lV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~~------ 190 (405)
T PRK08776 130 ADL-------TDPRSLADALAQSPK---LVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPALQ------ 190 (405)
T ss_pred ECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 765 378889888865443 888999999999985 4788899999999999999999753211
Q ss_pred HHHHHHhhcCCcEEEEeccccccCcc-CcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLY-GERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~-G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+.. .+.. +++.|.+|.++.+ +...|+++ +.+++..+ ++.........+++.+.+.++.+-++
T Consensus 191 ~pl~----~gaD-ivv~S~tK~l~g~~~~~~G~vv--~~~~~l~~----~l~~~~~~~g~~~s~~~a~l~~~gl~ 254 (405)
T PRK08776 191 KPLE----FGAD-LVLHSTTKYINGHSDVVGGAVV--ARDAELHQ----QLVWWANALGLTGSPFDAFLTLRGLR 254 (405)
T ss_pred Cccc----ccCC-EEEecCceeecCCCCceEEEEE--eCCHHHHH----HHHHHHHhcCCCCCHHHHHHHHhhhC
Confidence 1121 1222 7889999999766 47788876 76654433 33333333334567888777765543
No 150
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=6.4e-17 Score=157.52 Aligned_cols=247 Identities=14% Similarity=0.075 Sum_probs=150.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|.-...-|. -.+.+++++.+++. ... + +.. ....+....+++.+.... + .+++.+ ++|
T Consensus 29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~--~~~-~-~~~-~~~~~~~~~la~~l~~~~-~---~~~v~~--~~s 96 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAE--KLW-H-VSN-LYRIPEQERLAERLVENS-F---ADKVFF--TNS 96 (389)
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHH--hcC-c-ccc-ccCChHHHHHHHHHHhhC-C---CCEEEE--cCC
Confidence 3556899987632122232 22333444444443 110 1 111 111233344555543221 1 468888 999
Q ss_pred chhHHHHHHHHHHH--hcCCC----EEEEcCCCCCChHHHHHHcCCeEEEEEeecC--CCC----CCCHHHHHHHhhcCC
Q 018820 151 GTGSLRVGAEFLAR--HYHQR----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP--ATR----GLNFQGLLEDLGSAP 218 (350)
Q Consensus 151 ~~~al~l~~~l~~~--~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~--~~~----~~d~~~l~~~l~~~~ 218 (350)
|++|+..+..+... ..+|| +|++.++.|..+.......+........+.+ +++ -.|++.+++.+..
T Consensus 97 GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 174 (389)
T PRK01278 97 GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-- 174 (389)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC--
Confidence 99999886544322 23565 8999999999987666655443322211111 111 1588999988864
Q ss_pred CCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 219 AGAIVLLHACAHNPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
+.+++++...+||+| ..++.+.+++|.++|++||+++|+||+|.+|.+.+ + ..+...+ ..... +.+|||.+
T Consensus 175 -~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g--~-~~~~~~~-~~~pd---i~t~sK~l 246 (389)
T PRK01278 175 -NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG--K-LFAHEWA-GVTPD---IMAVAKGI 246 (389)
T ss_pred -CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC--c-ceeeccc-CCCCC---EEEEehhc
Confidence 234666666788898 78999999999999999999999999999886533 1 0111111 11112 35899999
Q ss_pred CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 298 GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 298 gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+ +|+|+||++ ++ +++.+.+.........+.+.+.|.++...|
T Consensus 247 ~-~G~~ig~~~--~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 288 (389)
T PRK01278 247 G-GGFPLGACL--AT-----EEAAKGMTPGTHGSTYGGNPLAMAVGNAVL 288 (389)
T ss_pred c-CCcceEEEE--Ec-----HHHHhccCCCCCCCCCCccHHHHHHHHHHH
Confidence 9 999999987 77 456665555544444457778887775544
No 151
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.76 E-value=5.5e-17 Score=158.12 Aligned_cols=200 Identities=17% Similarity=0.201 Sum_probs=140.2
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHH---hCCCCCCccCCcEEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP-----IVGLAEFNKLSAKLI---LGADSPAIRENRVTT 145 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p-----~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~ 145 (350)
.+++|++|.+ + ..+++.++++..+. . ....|.+ ..|.+++++++++++ +|.+ .+++.+
T Consensus 21 ~~~~l~~g~~-~----~~~p~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~-----~~~v~~ 86 (398)
T cd00613 21 SMSFLGSGTY-K----HNPPAVIKRNILEN-E---FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD-----VANASL 86 (398)
T ss_pred Cccccccccc-C----CcCcHHHHHHhccc-c---CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC-----ccceec
Confidence 4599999999 4 23355565554443 1 1234665 789999999999984 4432 346666
Q ss_pred EecC-CchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHHHHcC----CeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 146 VQCL-SGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVFTLAG----LSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 146 ~~t~-G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
+. |++++... .+.....+ ||+|++++|.|+.+...+...| ++++.+++ ++ ++.+|++.+++.+.+++
T Consensus 87 --~~~g~~~~~~~--~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~t 160 (398)
T cd00613 87 --QDEATAAAEAA--GLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS-DE-GGTVDLEALKEEVSEEV 160 (398)
T ss_pred --cCchHHHHHHH--HHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc-CC-CCCcCHHHHHHhcCCCe
Confidence 55 44444333 22233455 9999999999999999988877 89999887 43 35689999999886543
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
.++++++|+ |||.+. +.+++|.++|+++|+++|+|+++.... .. .+ .. ....-+++.|++|.+
T Consensus 161 ---~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~-~~--~~---~~----~~~~d~~~~s~~K~~- 223 (398)
T cd00613 161 ---AALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT-GL--KP---PG----EYGADIVVGNLQKTG- 223 (398)
T ss_pred ---EEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc-CC--CC---hH----HcCCCEEEeeccccC-
Confidence 366777774 999983 457999999999999999999764332 11 00 00 112468899999998
Q ss_pred cc----CcceeEEEEeeC
Q 018820 299 LY----GERVGALSIVCK 312 (350)
Q Consensus 299 l~----G~RvG~l~~v~~ 312 (350)
+| |+|+||++ .+
T Consensus 224 ~p~g~Ggp~~g~l~--~~ 239 (398)
T cd00613 224 VPHGGGGPGAGFFA--VK 239 (398)
T ss_pred CCCCCCCCceeEEE--Eh
Confidence 66 89999988 65
No 152
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=9.8e-17 Score=157.04 Aligned_cols=252 Identities=17% Similarity=0.106 Sum_probs=149.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+.+.|||..|.....-|. ....+++++.+.+. .. ..|....|..++...+++.+...-. ...+++++ ++|
T Consensus 34 dG~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~--~~s 104 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGH-NHPEVVEALKEQLA--KL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFF--VNS 104 (413)
T ss_pred CCCEEEEcCccHHhhccCC-CCHHHHHHHHHHHH--hC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEE--cCc
Confidence 3567899988743122331 12333444444443 11 2243322334444444444221110 11678998 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc-------------CCeEEEEEeecC-----CCCCCCHHHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA-------------GLSVKSYRYYDP-----ATRGLNFQGLLE 212 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~-----~~~~~d~~~l~~ 212 (350)
|++|+..+..++....+++.|++.+|+|..+....... +.+++.+|+ ++ +.+..|++.+++
T Consensus 105 gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~ 183 (413)
T cd00610 105 GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPY-PYRYRPPAELADDLEALEE 183 (413)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCC-CccccchhhHHHHHHHHHH
Confidence 99999886554433467899999999999865544322 123556665 21 123458899999
Q ss_pred HhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEe
Q 018820 213 DLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQ 291 (350)
Q Consensus 213 ~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 291 (350)
.++..+.+..++++...+|+||..+ +++++++|.++|+++|+++|+||+|.+|...+ . ......+ ..... +.
T Consensus 184 ~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g--~-~~~~~~~-~~~~d---~~ 256 (413)
T cd00610 184 ALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG--K-MFAFEHF-GVEPD---IV 256 (413)
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--c-hhhHhhc-CCCCC---eE
Confidence 8876433444566555666779866 78889999999999999999999999874322 1 1111111 11112 45
Q ss_pred ccccccCccCcceeEEEEeeCChhHHHHHHHHH--HHhhcccccCCChhHHHHHHHHh
Q 018820 292 SYAKNLGLYGERVGALSIVCKTADVAGRVESQV--KLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
||||.++ .|+|+||++ ++ +.+.+.+ .........+.+.+++.++...|
T Consensus 257 t~sK~l~-~g~~~g~~~--~~-----~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l 306 (413)
T cd00610 257 TLGKGLG-GGLPLGAVL--GR-----EEIMDAFPAGPGLHGGTFGGNPLACAAALAVL 306 (413)
T ss_pred EEccccc-CccccEEEE--Ec-----HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 8999999 589999977 65 4555554 22222222345555665554443
No 153
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.5e-16 Score=155.17 Aligned_cols=189 Identities=15% Similarity=0.148 Sum_probs=134.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 191 (350)
.....+|.+.++++. | .+++++ ++|+++|+.++ +.+++.+||.|++++|+|..+.. .++..|++
T Consensus 64 ~pt~~~Le~~lA~l~-g-------~~~~l~--~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~ 131 (394)
T PRK07050 64 TPTSLALAQRLAEIE-G-------GRHALL--QPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGIT 131 (394)
T ss_pred CHHHHHHHHHHHHHh-C-------CCeEEE--eccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence 344567888888763 3 347888 99999999984 45568899999999999998764 45678998
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .+.+.+++.++++++ +|++++|+|||| +..++++|+++|+++|+++|+|++|.....-
T Consensus 132 v~~vd~-------~~~~~l~~~i~~~tk---lV~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~~--- 195 (394)
T PRK07050 132 VRFYDP-------LIGAGIADLIQPNTR---LIWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLAF--- 195 (394)
T ss_pred EEEECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCccccccc---
Confidence 887653 144678887765444 888999999996 6778999999999999999999998653321
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHH
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
.+. ..+ .-|++.|+||.++ -.+.+.|+++ +.+++..+ +++........+.+...++++.+-
T Consensus 196 ---~~l----~~G-aDi~v~S~tK~~~g~~~~~gG~v~--~~~~~~~~----~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 196 ---KPF----EHG-VDISVQALTKYQSGGSDVLMGATI--TADAELHA----KLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred ---CHH----HcC-CeEEEEECCceecCCCCeeEEEEE--ECCHHHHH----HHHHHHHhcCCCCCHHHHHHHHcC
Confidence 111 112 3588999999996 2445689877 77654433 333333333446666766665443
No 154
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.75 E-value=1.4e-16 Score=155.09 Aligned_cols=191 Identities=14% Similarity=0.109 Sum_probs=127.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 190 (350)
+..-..+|.+.+|++. |. ++.++ +.+|+.++.. .+.+++.+||+|+++.|.|+.....+. ..|+
T Consensus 59 ~~pt~~~Le~~lA~l~-G~------~~al~---~~sG~~Ai~~--~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLE-GG------EEALA---FGSGMAAISA--TLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHh-CC------CcEEE---ECCHHHHHHH--HHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 4444688999999985 43 34444 5666778876 455667899999999999887666554 3455
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
++..++. .|++.+++.+.++++ ++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~~~tk---lV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~- 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIRPNTK---LIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR- 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhCcCce---EEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 4443322 478889988865443 8888999999999997 4677888999999999999996443221
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. ..+. -+++.|+||.++.+|+|+ ||++ ++ ++.+.++... .........+.+.+.++..-|
T Consensus 193 -----pl----~~g~-Div~~S~sK~l~g~g~~~gG~v~--~~-~~~i~~~~~~---~~~~~g~~~~~~~a~l~~~~L 254 (386)
T PRK06767 193 -----PL----ELGC-DAVVHSATKYIGGHGDVVAGVTI--CK-TRALAEKIRP---MRKDIGGIMAPFDAWLLLRGL 254 (386)
T ss_pred -----ch----hcCC-cEEEecCcceecCCCCceeEEEE--eC-hHHHHHHHHH---HHHHhCCCCCHHHHHHHHcCC
Confidence 11 1222 367889999999899997 7766 55 3322222222 222223344556566554433
No 155
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.74 E-value=9e-17 Score=156.54 Aligned_cols=190 Identities=18% Similarity=0.158 Sum_probs=130.4
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVK 193 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~ 193 (350)
-..+|++.+|++. |. + ..++ +++|+.|+.+ .+.+++.+||.|+++.|.|.... ..+...|++++
T Consensus 60 ~~~~le~~lA~l~-g~------~-~av~--~~sG~~Ai~~--~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~ 127 (391)
T TIGR01328 60 TVSNLEGRIAFLE-GT------E-AAVA--TSSGMGAIAA--TLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVD 127 (391)
T ss_pred hHHHHHHHHHHHh-CC------C-cEEE--ECCHHHHHHH--HHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEE
Confidence 3567999999985 43 2 2444 8888889877 44556789999999999887544 33456888888
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. -|++.+++.+.++++ +|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 128 ~vd~-------~d~e~l~~~i~~~tk---lV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~---- 190 (391)
T TIGR01328 128 FINM-------AIPEEVKAHIKDNTK---IVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN---- 190 (391)
T ss_pred EECC-------CCHHHHHHhhccCCe---EEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----
Confidence 8766 178888888865443 8889999999999887 5677888999999999999997654321
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. ..+.. +++.|+||.+|.+|.|+|.++ +.+++..++++..... .......+.+.+.++..-|
T Consensus 191 --~~----~~g~D-ivv~S~sK~lgg~g~~~gG~v--~~~~~li~~l~~~~~~--~~~g~~l~~~~a~l~l~~L 253 (391)
T TIGR01328 191 --PV----ALGVD-VVVHSATKYIGGHGDVVAGLI--CGKAELLQQIRMVGIK--DMTGSVISPFDAWLILRGL 253 (391)
T ss_pred --ch----hcCCC-EEEccccccccCCCCceEEEE--EcCHHHHHHHHHHHHH--hCCCCCCCcHHHHHHHhCc
Confidence 11 12223 778999999999999876544 4555444443321111 1112345555555554433
No 156
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.74 E-value=4.3e-16 Score=152.22 Aligned_cols=206 Identities=18% Similarity=0.096 Sum_probs=140.6
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCC--CCCC----CCCcHHHHHHHHHHHhCCCCCCccCCcEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVK--EYLP----IVGLAEFNKLSAKLILGADSPAIRENRVT 144 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~--~Y~p----~~G~~~lr~aia~~~~g~~~~~~~~~~v~ 144 (350)
+.+++-|..|.. . +.+.. +.++......+.. ..+ .+.. ..+..++|+.+++++ |.+ . +++|+
T Consensus 16 ~~~~~yld~~~~-~----~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-~~~-~---~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAAT-S----QKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI-NAA-S---DEEIV 84 (403)
T ss_pred CCceEEEeCccc-c----CCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CcC-C---CCeEE
Confidence 345788888876 2 33344 4444444431111 001 0100 124668999999875 543 1 46899
Q ss_pred EEecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCCh----HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 145 TVQCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGNH----PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 145 ~~~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
+ |.|+++++.+++..+. ...+||.|+++++.|+.. ....+..|++++.++. ++ ++.+|++.+++.+.+++
T Consensus 85 ~--~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 85 F--TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL-DD-DGTLDLDDLEKLLTEKT 160 (403)
T ss_pred E--eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec-CC-CCCCCHHHHHHHhccCC
Confidence 8 9999999987543321 246899999999987653 3455678999999998 53 45789999999886544
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+ ++++++++||||...+ +++|.++|+++|+++++|++|...... - .+. .. ...+++.|++|.+|
T Consensus 161 ~---lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~---~---~~~---~~-~~d~~~~s~~K~~g 224 (403)
T TIGR01979 161 K---LVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP---V---DVQ---AL-DCDFYVFSGHKMYG 224 (403)
T ss_pred e---EEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc---c---Ccc---cc-CCCEEEEecccccC
Confidence 3 8888999999999998 567788999999999999998643211 0 111 11 24578899999888
Q ss_pred ccCcceeEEEEeeC
Q 018820 299 LYGERVGALSIVCK 312 (350)
Q Consensus 299 l~G~RvG~l~~v~~ 312 (350)
.+| +||++ ++
T Consensus 225 p~G--~g~l~--~~ 234 (403)
T TIGR01979 225 PTG--IGVLY--GK 234 (403)
T ss_pred CCC--ceEEE--Ec
Confidence 666 89877 55
No 157
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.74 E-value=1.1e-16 Score=154.56 Aligned_cols=188 Identities=14% Similarity=0.101 Sum_probs=132.1
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 190 (350)
|.....+|++++|++. + ++.++ +.+|+.|+.. .+.+++.+||+|++++|+|..+...+ +..|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~-------~~~v~---~~sG~~Ai~~--~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-G-------AEALV---FPSGMAAITA--VLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-C-------CCEEE---ECCHHHHHHH--HHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 6667899999999985 2 34444 6666778877 44566889999999999999887654 35799
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. +++ .+ .+..+ ..++++++|+||||.+. ++++|+++|+++|+++|+|++|.... +.
T Consensus 116 ~v~~v~~-~~~-----~~----~~~~~---t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~-~~- 177 (366)
T PRK07582 116 TVREAPT-AGM-----AE----AALAG---ADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL-GQ- 177 (366)
T ss_pred EEEEECC-CCh-----HH----HhccC---ceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc-cc-
Confidence 9988876 221 11 12222 33777899999999765 47888999999999999999996422 11
Q ss_pred CCchHHHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+.. .+.. ++++|+||.+ |.+|.|+||++ +++++ +.+++.........+++.+.+.++.+-|.
T Consensus 178 ----~p~~----~g~D-ivv~S~sK~l~G~~g~~~G~v~--~~~~~----l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 178 ----RPLE----LGAD-LVVASDTKALTGHSDLLLGYVA--GRDPE----LMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred ----Cchh----cCCc-EEEecccccccCCCCeeEEEEE--cCcHH----HHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 1111 1223 6789999998 44679999987 76654 44444444445556677888877776554
No 158
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.73 E-value=2.9e-16 Score=152.53 Aligned_cols=185 Identities=14% Similarity=0.203 Sum_probs=129.4
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh----HHHHHHcCCeEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH----PKVFTLAGLSVK 193 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~ 193 (350)
-..+|++.++++. |. +.+++ +++|+.|+..+ +.+++.+||+|+++.+.|... ...++..|++++
T Consensus 55 ~~~~le~~la~l~-g~-------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~ 122 (380)
T TIGR01325 55 TVAAFEERIAALE-GA-------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVS 122 (380)
T ss_pred hHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEE
Confidence 3678999999874 43 24566 89999999884 455678999999999988764 335567899988
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. .|++.+++.+..++ .++++.+|+||||...+ +++|.++|+++|+++|+|++|..+....
T Consensus 123 ~v~~-------~d~~~l~~~i~~~t---klV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~---- 185 (380)
T TIGR01325 123 FVDP-------TDLNAWEAAVKPNT---KLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ---- 185 (380)
T ss_pred EECC-------CCHHHHHHhcCCCc---eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 8766 26888888776543 38888999999999875 5777889999999999999998654321
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVA 344 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~ 344 (350)
+. ..+ .-|++.|+||.++.+|.++|.++ ..+++ +.++++...+....+.+.+.+.++.
T Consensus 186 --pl----~~g-~Divv~S~sK~l~g~g~~~gG~v--v~~~~----~~~~l~~~~~~~g~~~~p~~a~~~l 243 (380)
T TIGR01325 186 --PL----KLG-ADVVVYSATKHIDGQGRVMGGVI--AGSEE----LMAEVAVYLRHTGPAMSPFNAWVLL 243 (380)
T ss_pred --ch----hhC-CCEEEeeccceecCCCCeEEEEE--EeCHH----HHHHHHHHHHhhCCCCCHHHHHHHH
Confidence 11 112 23777899999998999985444 33433 3344444333333344444444433
No 159
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=1.9e-16 Score=153.74 Aligned_cols=191 Identities=15% Similarity=0.111 Sum_probs=136.0
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 190 (350)
+..-...|.+++|++. | .+++++ ++|+++|+.+ .+++++.+||.|++++|+|+.....+ ...|+
T Consensus 51 ~npt~~~Le~~lA~le-g-------~e~ivv--t~gg~~Ai~~--~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 51 GNPNRGLLEQTLSELE-S-------GKGAVV--TNCGTSALNL--WVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCchHHHHHHHHHHHh-C-------CCeEEE--ECCHHHHHHH--HHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 3345678999999984 3 357888 9999999988 44566789999999999998644333 33466
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. .|++.+++.+.++++ +|++++|+||||.+++. ++|+++|+++|+++|+|++|.......
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~~~tk---lV~lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~~~~~~~- 184 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALAKKPK---LILLETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFLTPVLQK- 184 (388)
T ss_pred EEEEECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCccccccCC-
Confidence 7666642 578889888865444 88899999999999985 467888999999999999998644321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCcc-CcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLY-GERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~-G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
++ +.+.. ++++|++|.++-+ +.+.|+++ +.+++ +.++++.....+....+++.++++.+=|
T Consensus 185 -----pl----~~GaD-ivv~S~tK~l~G~~d~~gG~i~--~~~~~----~~~~~~~~~~~~G~~~~p~~a~l~~rgl 246 (388)
T PRK08861 185 -----PL----ELGAD-FVIHSTTKYINGHSDVIGGVLI--TKTKE----HAEELAWWGNCIGATGTPFDSYMTLRGI 246 (388)
T ss_pred -----Cc----ccCCC-EEEeecceeccCCCcceeEEEE--ecHHH----HHHHHHHHHhccCCCCChHHHHHHHhcC
Confidence 11 11222 7899999998754 47889876 66543 3334444444445566777777665544
No 160
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.73 E-value=2.7e-16 Score=153.93 Aligned_cols=165 Identities=18% Similarity=0.174 Sum_probs=122.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHH--HHhcCCCEEEEcCCCCCC----hHHHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFL--ARHYHQRTIYIPQPTWGN----HPKVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~--~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~ 192 (350)
..++|+++++++ |.. + +++|++ |+|+++++.+++..+ ..+.+||.|+++++.|+. +...++..|+++
T Consensus 69 ~~~~r~~la~~~-~~~-~---~~~v~~--t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 141 (406)
T PRK09295 69 MENVRKQAALFI-NAR-S---AEELVF--VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_pred HHHHHHHHHHHc-CcC-C---CCeEEE--eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 567888998875 431 1 678999 999999998754322 135789999999987753 445566789999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. ++ ++.+|++.+++.+.++++ ++++++|+||||..++. ++|+++|+++|+++++|++|...... +
T Consensus 142 ~~v~~-~~-~~~~d~~~l~~~i~~~t~---lv~l~~~~n~tG~~~~~---~~i~~~~~~~~~~vivD~a~~~g~~~-~-- 210 (406)
T PRK09295 142 RVIPL-NP-DGTLQLETLPALFDERTR---LLAITHVSNVLGTENPL---AEMIALAHQHGAKVLVDGAQAVMHHP-V-- 210 (406)
T ss_pred EEEec-CC-CCCCCHHHHHHhcCCCcE---EEEEecchhcccccCCH---HHHHHHHHHcCCEEEEEcccccCccc-c--
Confidence 99998 54 356899999998865443 88889999999999985 66788899999999999998654321 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.+. .. ..-+++.|++|.+|.+| +||++ .+
T Consensus 211 ---~~~---~~-~~D~~~~s~~K~~gp~G--~G~l~--~~ 239 (406)
T PRK09295 211 ---DVQ---AL-DCDFYVFSGHKLYGPTG--IGILY--VK 239 (406)
T ss_pred ---Cch---hc-CCCEEEeehhhccCCCC--cEEEE--Ec
Confidence 111 11 12377899999888555 79887 65
No 161
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=3.2e-16 Score=152.32 Aligned_cols=187 Identities=14% Similarity=0.145 Sum_probs=130.1
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcCCeE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAGLSV 192 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~ 192 (350)
.....+|++.+|++. |. +++++ ++||+.|+.. .+.+.+.+||.|+++.|+|..+...++ ..|+++
T Consensus 52 np~~~~lE~~lA~l~-g~-------~~~l~--~~sG~~Ai~~--~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 52 NPTLRPLEEALAKLE-GG-------VDALA--FNSGMAAIST--LFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred CccHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHH--HHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 345788999999985 42 35666 8899999987 455668899999999999999877764 456666
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
+.+. +|.+.+++.+++ +++ ++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 120 ~~~~--------~d~~~l~~~i~~~~tk---lV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 120 VLAY--------PSTEDIIEAIKEGRTK---LVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred EEEC--------CCHHHHHHhcCccCce---EEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 5432 367888888865 333 7778999999999998 457899999999999999998533211
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
. +. ..+ .-+++.|+||.++-+|.++ |+++ +.+++.. +++....+......+.+.+.++..
T Consensus 183 ~---~l----~~G-aDivv~S~sK~l~g~~d~~gG~vi--~~~~~~~----~~~~~~~~~~g~~~~p~~a~l~l~ 243 (385)
T PRK08574 183 R---PL----RHG-ADFVVHSLTKYIAGHNDVVGGVAV--AWSGEFL----EELWEWRRRLGTIMQPFEAYLVLR 243 (385)
T ss_pred C---hh----hhC-CcEEEeeCceeecCCCCceeEEEE--ECcHHHH----HHHHHHHHhcCCCCCHHHHHHHHc
Confidence 1 11 112 3488999999998788876 6555 6555433 333333332333445555555443
No 162
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.73 E-value=4.8e-16 Score=150.25 Aligned_cols=189 Identities=11% Similarity=0.144 Sum_probs=133.8
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 191 (350)
..-..+|++.+|++. |. +.. ++ ++||++++.++ + ..+.+||.|++++|+|+.... .++..|++
T Consensus 51 ~pt~~~le~~la~l~-g~------~~~-~~--~~sG~~ai~~~--~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 117 (366)
T PRK08247 51 NPTRGVLEQAIADLE-GG------DQG-FA--CSSGMAAIQLV--M-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVR 117 (366)
T ss_pred CchHHHHHHHHHHHh-CC------CcE-EE--EcCHHHHHHHH--H-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCce
Confidence 334678999999985 43 122 44 88889999763 2 456799999999999997533 44568999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .|++.+++.+.++++ ++++++|+|||| +..++++|+++|+++|+++|+|++|.......
T Consensus 118 v~~vd~-------~d~~~l~~~i~~~tk---lv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-- 182 (366)
T PRK08247 118 FVYVNT-------ASLKAIEQAITPNTK---AIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-- 182 (366)
T ss_pred EEEECC-------CCHHHHHHhcccCce---EEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCccccccC--
Confidence 888765 378899988876444 888899999975 57889999999999999999999995432221
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCcc-CcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLY-GERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~-G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. .. ...|+++|+||.++-+ +.+.||++ +++++ +.+++...+.....+.+.+.|.++.+-|
T Consensus 183 ----p~----~~-g~di~i~S~sK~~~g~~d~~~G~iv--~~~~~----l~~~~~~~~~~~g~~~s~~~a~l~~~~l 244 (366)
T PRK08247 183 ----PL----EE-GADIVIHSATKYLGGHNDVLAGLVV--AKGQE----LCERLAYYQNAAGAVLSPFDSWLLIRGM 244 (366)
T ss_pred ----ch----hc-CCcEEEeecceeccCCCceeeeEEe--cChHH----HHHHHHHHHHhcCCCCChHHHHHHHhcc
Confidence 11 11 2468999999998633 56999877 66543 3444444443334455667777765544
No 163
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=2.9e-16 Score=154.35 Aligned_cols=156 Identities=15% Similarity=0.170 Sum_probs=119.9
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSV 192 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~ 192 (350)
.-..+|++.+|++. |. +..++ +++|+.|+.. .+.+.+.+||+|++++|.|+... ..++..|+++
T Consensus 57 p~~~~le~~lA~l~-g~-------~~~v~--~~sG~~Ai~~--al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 124 (418)
T TIGR01326 57 PTTDVLEQRIAALE-GG-------VAALA--VASGQAAITY--AILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEV 124 (418)
T ss_pred hhHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHH--HHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEE
Confidence 34578999999884 42 24555 8999999977 44556789999999999986543 3456789999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. .|++.+++.+.++++ ++++.+|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 125 ~~v~~-------~d~~~l~~~l~~~t~---~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~---- 187 (418)
T TIGR01326 125 RFVDP-------DDPEEFEKAIDENTK---AVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC---- 187 (418)
T ss_pred EEECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----
Confidence 88865 278899988865443 7778999999999886 568889999999999999998643211
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+ + .. ...|++.||||.++.+|+|+||++
T Consensus 188 --~~---l-~~-g~Divv~S~sK~l~g~G~~lGg~v 216 (418)
T TIGR01326 188 --RP---I-DH-GADIVVHSATKYIGGHGTAIGGVI 216 (418)
T ss_pred --Cc---h-hc-CCeEEEECccccccCCccceEEEE
Confidence 01 1 11 257899999999999999999988
No 164
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.72 E-value=1.4e-16 Score=154.35 Aligned_cols=154 Identities=18% Similarity=0.186 Sum_probs=118.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
.+++++ |+|+++|+.+++ .+. +.|||+|++++|+|..+...+...|++++.+++ +++++.+|++.+++.+..++
T Consensus 46 ~~~~v~--~~sgt~aL~~~l--~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~-d~~~~~~d~~~le~~i~~~t 120 (376)
T TIGR02379 46 TKKALL--TPSCTAALEMAA--LLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-RPDTMNIDETLIESAITHRT 120 (376)
T ss_pred CCeEEE--eCCHHHHHHHHH--HHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhcCcCc
Confidence 457888 999999998843 344 679999999999999999999999999999999 77778899999999887544
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCCchHHHHHHhhcCCcEEEEeccc---
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDSDAQSVRMFVADGGECFIAQSYA--- 294 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~S--- 294 (350)
+ +++ |+||||...+ +++|+++|+++|++||+|++|.... +++ + .. ..+..+.+||
T Consensus 121 k---~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~--~---~~-------g~~~~~~~fSf~~ 179 (376)
T TIGR02379 121 K---AIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKG--R---AL-------GSIGHLGTFSFHE 179 (376)
T ss_pred e---EEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCC--c---cc-------CCCCCEEEEeCCC
Confidence 3 554 6889998876 5678999999999999999987664 332 1 11 1112234444
Q ss_pred -cccCccCcceeEEEEeeCChhHHHHHHH
Q 018820 295 -KNLGLYGERVGALSIVCKTADVAGRVES 322 (350)
Q Consensus 295 -K~~gl~G~RvG~l~~v~~~~~~~~~~~~ 322 (350)
|.+. +|.|.|+++ +++++..+++..
T Consensus 180 ~K~l~-~g~~gG~v~--~~~~~~~~~~~~ 205 (376)
T TIGR02379 180 TKNYT-SGGEGGALL--INDQAFIERAEI 205 (376)
T ss_pred CCcCc-ccCCceEEE--ECCHHHHHHHHH
Confidence 8886 888999987 888776655543
No 165
>PRK07179 hypothetical protein; Provisional
Probab=99.72 E-value=1.6e-15 Score=148.60 Aligned_cols=220 Identities=18% Similarity=0.170 Sum_probs=143.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCC-CCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEY-LPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y-~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
++...++|+.-.|.+....|.+.+++.++++.+.........| ....-..+|.+.+|+++ |. +.+++ ++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~-g~-------~~~~~--~~ 121 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT-GF-------ESCLL--CQ 121 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh-CC-------CcEEE--EC
Confidence 4567899998888665544333333333333321011001112 11223577888888885 43 34566 89
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
||++|+.+ .+.++..+||.|++..+.+......++..|++++.++. .|++.+++.+++.. ..++++.++
T Consensus 122 sG~~An~~--~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~lV~v~~v 190 (407)
T PRK07179 122 SGWAANVG--LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHG--PGIIVVDSV 190 (407)
T ss_pred CHHHHHHH--HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcC--CeEEEECCC
Confidence 99999977 44555778999999888887777777788888766543 58899999886532 347788999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc-EEEEeccccccCccCcceeEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE-CFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+||||.+.+ +++|.++|+++|+++|+||+|.....+. ........+ ....+ .+++.||||.+| .|+||++
T Consensus 191 ~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~--~g~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~G~l~ 261 (407)
T PRK07179 191 YSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP--QGAGLVAEL-GLTSRVHFITASLAKAFA---GRAGIIT 261 (407)
T ss_pred CCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC--CCCchHHhc-CCCCCCCEEEeechHhhh---ccCeEEE
Confidence 999999998 5678899999999999999997544331 111112222 11123 488899999986 3899977
Q ss_pred EeeCChhHHHHHHHHHHHh
Q 018820 309 IVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~ 327 (350)
++ +.+++.+...
T Consensus 262 --~~-----~~~~~~~~~~ 273 (407)
T PRK07179 262 --CP-----RELAEYVPFV 273 (407)
T ss_pred --eC-----HHHHHHHHHh
Confidence 65 3454444433
No 166
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.72 E-value=4.4e-16 Score=151.83 Aligned_cols=203 Identities=20% Similarity=0.177 Sum_probs=135.0
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.|..+.+ . +++..+++...+.+.... .....|....+ ..++|+.+++++ |.+ +++|++ ++
T Consensus 18 ~~yl~~~~~-~----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~v~~--~~ 84 (397)
T TIGR01976 18 RVFFDNPAG-T----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL-NAD-----PPEVVF--GA 84 (397)
T ss_pred eEEecCCcc-C----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc-CCC-----CCeEEE--eC
Confidence 577777666 2 333333333333333111 11123544333 358888888874 432 446887 99
Q ss_pred CchhHHHHHHHHH-HHhcCCCEEEEcCCCCCChH----HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 150 SGTGSLRVGAEFL-ARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 150 G~~~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|+++++.++...+ ..+.+||+|++++|.|+... ..++..|++++.++. +++++.+|++.+++.+.+++ .++
T Consensus 85 ~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~i~~~~---~lv 160 (397)
T TIGR01976 85 NATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARV-DEATGELHPDDLASLLSPRT---RLV 160 (397)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEec-cccCCCcCHHHHHHhcCCCc---eEE
Confidence 9999987643322 23578999999999886543 445678999999988 55456789999999886544 388
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
++++|+||||...+ +++|.++|+++|+++++|+++.. .... .. +.+.+.. +++.|++|.+| .|+
T Consensus 161 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~-~~~~-----~~---~~~~~~d-~~~~s~~K~~g---~~~ 224 (397)
T TIGR01976 161 AVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA-PHGL-----ID---VQATGAD-FLTCSAYKFFG---PHM 224 (397)
T ss_pred EEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc-cccC-----CC---HHHcCCC-EEEEechhhcC---Cce
Confidence 89999999999886 67778899999999999998632 1110 01 1122233 44589999874 579
Q ss_pred eEEEEeeC
Q 018820 305 GALSIVCK 312 (350)
Q Consensus 305 G~l~~v~~ 312 (350)
||++ ++
T Consensus 225 G~l~--~~ 230 (397)
T TIGR01976 225 GILW--GR 230 (397)
T ss_pred EEEE--Ec
Confidence 9977 65
No 167
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.72 E-value=3.8e-16 Score=152.63 Aligned_cols=191 Identities=13% Similarity=0.086 Sum_probs=135.3
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCC----CChHHHHHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTW----GNHPKVFTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y----~~~~~~~~~~G~~ 191 (350)
..-..+|.+.+|++. |. + +.++ +++|+.|+.. .+.+++.+||+|+++...| ..+...++..|++
T Consensus 69 ~p~~~~le~~lA~l~-g~------~-~al~--~~sG~~Ai~~--~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~ 136 (403)
T PRK07810 69 NPTVSMFEERLRLIE-GA------E-ACFA--TASGMSAVFT--ALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVE 136 (403)
T ss_pred CchHHHHHHHHHHHh-CC------C-cEEE--ECChHHHHHH--HHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcE
Confidence 334678999999884 42 2 4555 8888899877 4455678999999987555 4445566778999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .|++.+++.++++++ +|++.+|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 137 v~~vd~-------~d~~~l~~ai~~~tk---lV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~-- 201 (403)
T PRK07810 137 TVFVDG-------EDLSQWEEALSVPTQ---AVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR-- 201 (403)
T ss_pred EEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 988864 388899998876544 7888999999998885 6777889999999999999997654321
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+. ..+ --+++.|++|.++..|+++ ||++ ++ ++.+. ++++...+.....++.+.++++.+-|+
T Consensus 202 ----~~----~~g-aDivv~S~tK~l~g~g~~~gG~v~--~~-~~~~~---~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 202 ----GL----PLG-ADVVVYSGTKHIDGQGRVLGGAIL--GD-REYID---GPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred ----hh----hcC-CcEEEccCCceecCCcCceeEEEE--eC-hHHHH---HHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 11 112 2477899999999899999 5544 54 33222 223333344445677777777665443
No 168
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.72 E-value=6e-16 Score=149.52 Aligned_cols=164 Identities=17% Similarity=0.134 Sum_probs=121.5
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc---CCCEEEEcCCCCCCh----HHHHHHcCC
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY---HQRTIYIPQPTWGNH----PKVFTLAGL 190 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~----~~~~~~~G~ 190 (350)
+..++|+.+++++ |.+ . +++|++ |+|+++++.+++ .++.. +||+|++++|+|+.. ..+.+..|+
T Consensus 44 ~~~~~~~~la~~~-~~~-~---~~~v~~--~~g~t~a~~~~~--~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 44 AYEAAREKVARFI-NAP-S---PDEIIF--TRNTTEAINLVA--YGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHh-CCC-C---CCeEEE--eCCHHHHHHHHH--HHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 3567888898885 432 1 568888 999999998854 34445 899999999999874 334457899
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.+++ + +++.+|++.+++.+.+.+ .++++++++||||...+. ++|+++|+++|+++++|++|......
T Consensus 115 ~~~~v~~-~-~~~~~d~~~l~~~l~~~~---~~v~~~~~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-- 184 (373)
T cd06453 115 KLKVVPV-D-DDGQLDLEALEKLLTERT---KLVAVTHVSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP-- 184 (373)
T ss_pred EEEEeec-C-CCCCcCHHHHHHHhcCCc---eEEEEeCcccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee--
Confidence 9999998 5 346799999999987643 378889999999999885 57789999999999999998632211
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.. +.+.+. -+++.|+.|.++. .++||++ ++
T Consensus 185 ----~~---~~~~~~-d~~~~s~~K~~~~--~g~g~~~--~~ 214 (373)
T cd06453 185 ----VD---VQDLGC-DFLAFSGHKMLGP--TGIGVLY--GK 214 (373)
T ss_pred ----ee---ccccCC-CEEEeccccccCC--CCcEEEE--Ec
Confidence 01 111122 3455788899884 6789877 65
No 169
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.72 E-value=5.9e-16 Score=149.81 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=135.8
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 190 (350)
+..-..+|.+.++++. |. ++.++ +++|++|+.. .+.+++.+||.|+++.++|...... ++..|+
T Consensus 38 ~~p~~~~le~~la~l~-g~-------~~a~~--~~sG~~Ai~~--~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALE-GG-------EAALA--FSSGMAAIST--VLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHH-CC-------CCEEE--EcCHHHHHHH--HHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 3445678999999874 42 24555 7888999988 4455678999999999999876544 346788
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. -|++.+++.+++++ .++++.+|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 106 ~~~~v~~-------~d~~~l~~~i~~~~---~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIKPET---KLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCC-------CCHHHHHHhcCCCC---eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 8877765 25888888886543 37888999999999887 5678999999999999999987654321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. .. ..-+++.|+||.++.+| .+.||++ +++++ +.+++....+....+.+.+.+.++...|
T Consensus 172 -----~~----~~-g~Divv~S~tK~l~g~~~~~gG~v~--~~~~~----l~~~l~~~~~~~g~~~~p~~a~~~l~~l 233 (369)
T cd00614 172 -----PL----EL-GADIVVHSATKYIGGHSDVIAGVVV--GSGEA----LIQRLRFLRLALGTILSPFDAWLLLRGL 233 (369)
T ss_pred -----hh----hh-CCcEEEeccceeccCCCCceEEEEE--eCcHH----HHHHHHHHHHhhCCCCCHHHHHHHHcCC
Confidence 11 11 23478999999998776 8899877 76433 4444444433334456666666655444
No 170
>PRK02948 cysteine desulfurase; Provisional
Probab=99.72 E-value=2.2e-16 Score=153.25 Aligned_cols=162 Identities=20% Similarity=0.197 Sum_probs=117.7
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH--hcCCCEEEEcCCCCCC---hHHHHHHcCCeEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR--HYHQRTIYIPQPTWGN---HPKVFTLAGLSVK 193 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~--~~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~ 193 (350)
..++|+.+++++ |.+ +++|++ ++|+++++.++...+.. ..+||.|++..+.|+. +...++..|++++
T Consensus 45 ~~~~r~~la~~~-g~~-----~~~i~~--~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~ 116 (381)
T PRK02948 45 LQVCRKTFAEMI-GGE-----EQGIYF--TSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEEE--eCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEE
Confidence 456778888775 432 678988 99999999774322211 1468999998855554 4445677899999
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.+++ ++ ++.+|++.+++.+++.+ .++++++|+||||..++. ++|.++|+++|+++++|+ |+.|...+. +
T Consensus 117 ~v~~-~~-~~~~d~~~l~~~l~~~~---~lv~~~~~~n~tG~~~~~---~~I~~l~~~~~~~vivD~-~~~~g~~~~--~ 185 (381)
T PRK02948 117 EIPV-DK-SGLIRLVDLERAITPDT---VLASIQHANSEIGTIQPI---AEIGALLKKYNVLFHSDC-VQTFGKLPI--D 185 (381)
T ss_pred EEee-CC-CCCCCHHHHHHhcCCCC---EEEEEECCcCCcEeehhH---HHHHHHHHHcCCEEEEEC-hhhcccccc--C
Confidence 9998 54 35789999999886543 488899999999999875 567889999999999995 555543211 1
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+ ......+++.|++|.+|.+| +|+++
T Consensus 186 ------~-~~~~~d~~~~s~~K~~gp~G--~G~l~ 211 (381)
T PRK02948 186 ------V-FEMGIDSLSVSAHKIYGPKG--VGAVY 211 (381)
T ss_pred ------c-ccCCCCEEEecHHhcCCCCc--EEEEE
Confidence 1 11124567889999999888 78877
No 171
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.71 E-value=6.3e-16 Score=152.27 Aligned_cols=165 Identities=18% Similarity=0.117 Sum_probs=121.9
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCC----hHHHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGN----HPKVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~ 192 (350)
..++|+++++++ +.+ + +++|++ |.|+++++.+++..+. .+.+||+|+++++.|+. +..+.+..|+++
T Consensus 78 ~~~~r~~la~~~-~~~-~---~~~v~~--t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 78 YELARKKVAAFI-NAS-T---SREIVF--TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHc-CCC-C---CCEEEE--eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 468999999985 432 1 578999 9999999988543322 35789999999997764 344556789999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. +++ +.+|++.+++.+.++++ ++++++++||||..++. ++|+++|+++|+++++|++|..-. .
T Consensus 151 ~~v~~-~~~-~~~~~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g~-~---- 217 (424)
T PLN02855 151 KFVGL-TPD-EVLDVEQLKELLSEKTK---LVATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVPH-M---- 217 (424)
T ss_pred EEEec-CCC-CCcCHHHHHHHhccCce---EEEEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCC-c----
Confidence 99998 543 45899999999875443 88889999999999986 467888999999999999984211 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
++. +...+ .-+++.|++|.+|.+| +||++ .+
T Consensus 218 ---~~~-~~~~~-~d~~~~s~~K~~gp~G--~G~l~--~~ 248 (424)
T PLN02855 218 ---PVD-VQTLG-ADFLVASSHKMCGPTG--IGFLW--GK 248 (424)
T ss_pred ---CCC-chhcC-CCEEEeecccccCCCc--cEEEE--Ec
Confidence 111 11112 2366999999777444 89988 65
No 172
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.71 E-value=7e-16 Score=149.83 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=129.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYR 196 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 196 (350)
...+|++++++++ |. ++++. ++|+++|+.++ +.++ +.+||+|++++|+|..+...+...|++++.++
T Consensus 34 ~~~~le~~la~~~-g~-------~~~v~--~~sgt~al~la--l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd 101 (379)
T PRK11658 34 KNQALEQAFCQLT-GN-------QHAIA--VSSATAGMHIT--LMALGIGPGDEVITPSLTWVSTLNMIVLLGATPVMVD 101 (379)
T ss_pred hHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEe
Confidence 4789999999985 43 24555 89999999984 4555 67999999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchH
Q 018820 197 YYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQ 275 (350)
Q Consensus 197 ~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~ 275 (350)
. +++++.+|++.+++.+.++++ +++ |+||+|...+ +++|.++|+++|+++|+|+++. +..+.+ .+
T Consensus 102 ~-~~~~~~~d~~~l~~~i~~~tk---av~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~--~~-- 167 (379)
T PRK11658 102 V-DRDTLMVTPEAIEAAITPRTK---AII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKG--RH-- 167 (379)
T ss_pred c-CCCcCCcCHHHHHHhcccCCe---EEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECC--ee--
Confidence 8 777788999999998875443 554 6788998765 5678899999999999999997 344432 11
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
. ...+ +.+.||+|.-.+++.+.|+++ +.+++..+++.
T Consensus 168 -~---g~~g---~~~~Sf~~~K~l~~g~GG~v~--~~~~~~~~~~~ 204 (379)
T PRK11658 168 -I---GARG---TAIFSFHAIKNITCAEGGLVV--TDDDELADRLR 204 (379)
T ss_pred -c---CCCC---CEEEeCCCCCcCcccCceEEE--ECCHHHHHHHH
Confidence 1 1112 256788877667888999877 77776655554
No 173
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.71 E-value=1.6e-16 Score=149.18 Aligned_cols=172 Identities=17% Similarity=0.100 Sum_probs=126.5
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
+.|..-+.++++.+|+++ |. ++-+++ ++|+++++.. .+.+.+.+||+|+++.|+|......+...|+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~-ga------~~~~~~--~~Gst~a~~~--~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~ 123 (294)
T cd00615 55 LDPTGPIKEAQELAARAF-GA------KHTFFL--VNGTSSSNKA--VILAVCGPGDKILIDRNCHKSVINGLVLSGAVP 123 (294)
T ss_pred CCCChHHHHHHHHHHHHh-CC------CCEEEE--cCcHHHHHHH--HHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEE
Confidence 334444688888888874 53 334445 8999999977 455668899999999999998888899999999
Q ss_pred EEEEeecCCC----CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC-CC
Q 018820 193 KSYRYYDPAT----RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF-AS 267 (350)
Q Consensus 193 ~~v~~~~~~~----~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~ 267 (350)
+.++....+. ..+|++.+++.+++.++ ..++++++| ||||.+++ +++|+++|+++|+++|+||+|..+ .+
T Consensus 124 ~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~-~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEHPD-AKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EEecCccCcccCcCCCCCHHHHHHHHHhCCC-ceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 9887621221 37899999999875433 346667788 79999986 578899999999999999999753 33
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+ . .+.. . ......++++|++|.+ +|+|.|+++
T Consensus 199 ~~---~-~~~~-~-~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 199 HP---I-LPSS-A-AMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred Cc---c-cCcc-h-hhcCCcEEEEchhccc--chHhHHHHH
Confidence 21 1 1111 1 1124679999999974 899987655
No 174
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.71 E-value=9.6e-16 Score=147.19 Aligned_cols=164 Identities=15% Similarity=0.091 Sum_probs=118.9
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHHHcCCeEEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFTLAGLSVKSYR 196 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~ 196 (350)
..++++.+++++ |.+ + ++.+++ +.|+++++.++ +.+++.+||.|++++|+|+. +...++..|++++.+|
T Consensus 34 ~~~~~~~la~~~-g~~-~---~~~~~~--~~~~t~al~~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVF-QTE-N---GLTFLL--SGSGTGAMEAA--LSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHh-cCC-C---CCEEEE--ecCcHHHHHHH--HHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 456777777774 542 1 345666 88889999874 44567899999999887765 4667788999999999
Q ss_pred eecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 197 YYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 197 ~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
. ++ ++.+|++.+++.+++ +++ ++++++|+||||..++. ++|.++|+++|+++++|++|. + +.. . .
T Consensus 105 ~-~~-~~~~~~~~l~~~i~~~~~~---~v~i~~~~~~~G~~~~~---~~i~~~a~~~~~~li~D~~~~-~--g~~--~-~ 170 (356)
T cd06451 105 K-PW-GEAVSPEEIAEALEQHDIK---AVTLTHNETSTGVLNPL---EGIGALAKKHDALLIVDAVSS-L--GGE--P-F 170 (356)
T ss_pred c-CC-CCCCCHHHHHHHHhccCCC---EEEEeccCCCcccccCH---HHHHHHHHhcCCEEEEeeehh-c--cCc--c-c
Confidence 8 54 367899999999875 443 77778899999999884 557888899999999999764 2 210 0 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.. ...+.. +++.|.+|.++. +.++||++ .+
T Consensus 171 ~~---~~~~~d-~~~~s~~K~l~~-p~g~G~l~--~~ 200 (356)
T cd06451 171 RM---DEWGVD-VAYTGSQKALGA-PPGLGPIA--FS 200 (356)
T ss_pred cc---cccCcc-EEEecCchhccC-CCCcceeE--EC
Confidence 11 112234 456788999984 45799987 65
No 175
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.70 E-value=2.3e-15 Score=145.33 Aligned_cols=192 Identities=18% Similarity=0.162 Sum_probs=134.6
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEecCC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~G 150 (350)
.+||.+--.. .-|-.++.+.+.++..... .. |. +.+++++++.+++ +| .+++++ |+|
T Consensus 9 ~~ina~g~~t--~~g~s~~~~~v~~a~~~~~--~~----~~---~~~~~~~~~~~~~a~~~g-------~~~~~~--~~g 68 (363)
T TIGR01437 9 KVINASGKMT--ILGVSTVSDEVADAQKRGA--QN----YF---EIKELVNKTGEYIANLLG-------VEDAVI--VSS 68 (363)
T ss_pred eEEECCcEee--cCCCCCCCHHHHHHHHHHH--hc----CC---CHHHHHHHHHHHHHHhhC-------CCeEEE--EcC
Confidence 3566543332 3333445666666655544 11 32 3566777766663 34 246777 999
Q ss_pred chhHHHHHHHHHHHhcCCC---------------EEEEcCCCCCCh----HHHHHHcCCeEEEEEeecCCCCCCCHHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQR---------------TIYIPQPTWGNH----PKVFTLAGLSVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd---------------~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 211 (350)
++.|+.+ .+.+.+.+|| .|+++.|.|.+| ..++...|++++.++. + +.+|++.++
T Consensus 69 ~t~al~~--al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~-~---~~~d~~~le 142 (363)
T TIGR01437 69 ASAGIAQ--SVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY-A---NECSAEQLE 142 (363)
T ss_pred HHHHHHH--HHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC-C---CCCCHHHHH
Confidence 9999998 4556677887 999999888877 5677889999998876 2 469999999
Q ss_pred HHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEe
Q 018820 212 EDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQ 291 (350)
Q Consensus 212 ~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 291 (350)
+++.++++ .++++++||||+|.+.+. ++|+++|++||+++|+|++|.. + .. .+...+. -+++.
T Consensus 143 ~ai~~~t~--ai~~v~~~~~~~g~~~~~---~~i~~~a~~~gi~vivD~a~~~----~----~~---~~~~~g~-D~~~~ 205 (363)
T TIGR01437 143 AAITEKTA--AILYIKSHHCVQKSMLSV---EDAAQVAQEHNLPLIVDAAAEE----D----LQ---KYYRLGA-DLVIY 205 (363)
T ss_pred HhcChhce--EEEEEecCCCCcCCcCCH---HHHHHHHHHcCCeEEEECCCCC----c----hH---HHHHcCC-CEEEE
Confidence 99987654 355568899999998886 4579999999999999999861 1 01 1112222 46678
Q ss_pred ccccccCccCcceeEEEEeeC
Q 018820 292 SYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~~v~~ 312 (350)
|++|.+ +|+|.|+++ .+
T Consensus 206 S~~K~l--~gp~~G~l~--~~ 222 (363)
T TIGR01437 206 SGAKAI--EGPTSGLVL--GK 222 (363)
T ss_pred eCCccc--CCCceEEEE--Ec
Confidence 999975 699999876 64
No 176
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.70 E-value=1.1e-15 Score=147.46 Aligned_cols=167 Identities=14% Similarity=0.126 Sum_probs=120.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSY 195 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v 195 (350)
-..++|+.+++++ |.... .+.|++ +.++++++.. .+.++..+||.|+++.++|... ...++..|++++.+
T Consensus 38 ~~~~~~~~l~~l~-~~~~~---~~~i~~--~~~gt~~l~~--~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i 109 (368)
T PRK13479 38 LTASVRAKLVAIA-TGEEG---YTCVPL--QGSGTFSVEA--AIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHHh-CCCCC---ceEEEE--cCCcHHHHHH--HHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEE
Confidence 3577888888875 43211 245666 9999999988 4455567899999988888766 37778899999999
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
+. +. ++.+|++.+++.++..++ ..++++++|+||||...+. ++|+++|+++++++|+| +|+.|....
T Consensus 110 ~~-~~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~~---~~i~~l~~~~~~~livD-a~~~~g~~~------ 176 (368)
T PRK13479 110 DT-GE-DEPPDAAEVEAALAADPR-ITHVALVHCETTTGILNPL---DEIAAVAKRHGKRLIVD-AMSSFGAIP------ 176 (368)
T ss_pred EC-CC-CCCCCHHHHHHHHHhCCC-CcEEEEEcccCccccccCH---HHHHHHHHHcCCEEEEE-cccccCCcc------
Confidence 98 43 356899999998875432 3367788999999999884 57788899999999999 666664211
Q ss_pred HHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeC
Q 018820 276 SVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCK 312 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~ 312 (350)
+. +...+.. +++.|++|.+ |.+| +||++ ++
T Consensus 177 -~~-~~~~~~d-~~v~s~~K~l~g~~G--~G~l~--~~ 207 (368)
T PRK13479 177 -ID-IAELGID-ALISSANKCIEGVPG--FGFVI--AR 207 (368)
T ss_pred -cc-ccccCce-EEEecCccccccCCC--ceEEE--EC
Confidence 11 1111223 5567999975 6677 69988 66
No 177
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=1.3e-15 Score=147.95 Aligned_cols=194 Identities=12% Similarity=0.078 Sum_probs=134.9
Q ss_pred CCCCCC--CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---
Q 018820 111 KEYLPI--VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF--- 185 (350)
Q Consensus 111 ~~Y~p~--~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~--- 185 (350)
+.|+.. .+...|++++|++. +. +++++ +.||++|+.. .+++++.+||+|++++|.|..+...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le-~~-------~~~~~--~~sG~~Ai~~--~l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE-GG-------AGTAL--YPSGAAAISN--ALLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHH--HHHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 457764 34569999999884 32 35677 9999999988 45566889999999999998777544
Q ss_pred -HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 186 -TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 186 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
...|+++..++. .+.+.+++.+.++++ +|++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~~~Tk---lV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIRPNTK---VLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 457877766543 145778887765444 88899999999765 6789999999999999999999975
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIV 343 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~ 343 (350)
...- .+. +.| -=|++.|.+|.+ |-.+...|++ +.+++ +.+++.........+.+++.++++
T Consensus 188 p~~~------~Pl----~~G-aDivv~S~tK~l~Gh~d~~~G~~---~~~~~----~~~~l~~~~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PINS------RPF----EMG-VDISIQAATKYIVGHSDVMLGTA---TANEK----HWDQLREHSYLMGQCTSPDDVYLA 249 (394)
T ss_pred cccC------Ccc----ccC-ceEEEEeCCeEecCCCCEEEEEE---ECCHH----HHHHHHHHHHhcCCCCCHHHHHHH
Confidence 3211 111 111 238899999999 4445667754 34443 333344444344556777777766
Q ss_pred HHHh
Q 018820 344 AAIL 347 (350)
Q Consensus 344 ~~~L 347 (350)
.+=|
T Consensus 250 ~rgl 253 (394)
T PRK09028 250 MRGL 253 (394)
T ss_pred Hccc
Confidence 5433
No 178
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.69 E-value=3.1e-15 Score=143.16 Aligned_cols=193 Identities=17% Similarity=0.149 Sum_probs=128.9
Q ss_pred CCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC
Q 018820 88 GKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167 (350)
Q Consensus 88 ~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~ 167 (350)
||..+.+.+++++.... ......|. .-..++|+.+++++ |.+.. ...|++ +.|+++++..+ +...+.+
T Consensus 6 ~p~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~la~~~-~~~~~---~~~i~~--~~~gt~~l~~~--~~~~~~~ 73 (355)
T TIGR03301 6 GPLSTSATVRDAMLVDW--CHWDSEFN--DVTDQVRDRLLALA-GGDDN---HTCVLL--QGSGTFAVEAT--IGSLVPR 73 (355)
T ss_pred CCCCCCHHHHHHhhhhc--cCCCHHHH--HHHHHHHHHHHHHh-cCCCC---CcEEEE--eCCcHHHHHHH--HHhccCC
Confidence 44455677777766522 11112242 23567888888875 44311 235666 88999999884 4455667
Q ss_pred CCEEEEcC-CCCCC-hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 168 QRTIYIPQ-PTWGN-HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 168 gd~Vlv~~-P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
||+|++.+ +.|+. +..+++..|.+++.++. +. ++.+|++.+++.++..++ ..++++++++||||...+ +++|
T Consensus 74 ~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~-~~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~~G~~~~---~~~i 147 (355)
T TIGR03301 74 DGKLLVLINGAYGERLAKICEYLGIPHTDLNF-SE-YEPPDLNRIEEALAADPD-ITHVATVHHETTTGILNP---LEAI 147 (355)
T ss_pred CCeEEEECCCchhhHHHHHHHHcCCceEEEec-CC-CCCCCHHHHHHHHHhCCC-ceEEEEEecCCcccchhH---HHHH
Confidence 77766555 45554 45677889999999987 43 467899999999876433 346667889999999876 6788
Q ss_pred HHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeC
Q 018820 246 RQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCK 312 (350)
Q Consensus 246 ~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~ 312 (350)
+++|+++++++|+|+++. +... + ..+. .. ..-+++.|++|.+ |++| +||++ ++
T Consensus 148 ~~l~~~~~~~livD~~~s-~g~~----~-~~~~---~~-~~d~~~~s~~K~l~~~~G--~g~~~--~~ 201 (355)
T TIGR03301 148 AKVARSHGAVLIVDAMSS-FGAI----P-IDIE---EL-DVDALIASANKCLEGVPG--FGFVI--AR 201 (355)
T ss_pred HHHHHHcCCEEEEEeccc-cCCc----c-cchh---hc-CccEEEecCCcccccCCc--eeEEE--EC
Confidence 999999999999997543 3211 1 1111 11 2347789999987 5555 69887 66
No 179
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.69 E-value=4.6e-15 Score=144.46 Aligned_cols=167 Identities=13% Similarity=0.093 Sum_probs=126.8
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
...++|+.+|+++ |. +++.+ ++|+++++.+ .+.+.+.+||+|+++.++|......++..|++++.++.
T Consensus 64 ~~~~l~~~lA~~~-g~-------~~~~~--~~g~t~a~~~--al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 131 (387)
T PRK09331 64 PIADFHEDLAEFL-GM-------DEARV--THGAREGKFA--VMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPK 131 (387)
T ss_pred HHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHH--HHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 4789999999985 43 35667 9999999987 44556789999999999877666678889999999987
Q ss_pred ecCCCCCCCHHHHHHHhhcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 198 YDPATRGLNFQGLLEDLGSA----PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~~----~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
..++++.+|++.+++.+++. .++..++++++|+||||...+ +++|+++|+++|+++++|++|..-... .+
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~---~~ 205 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMP---VD 205 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCcC---CC
Confidence 21345779999999998742 123557888999999997654 778899999999999999998742211 11
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
... . ..-+++.|++|.++ .+.|+||++ ++
T Consensus 206 ---~~~---~-g~D~~~~s~~K~l~-~~~~~G~l~--~~ 234 (387)
T PRK09331 206 ---GKK---L-GADFIVGSGHKSMA-ASAPSGVLA--TT 234 (387)
T ss_pred ---HHH---c-CCCEEEeeCccccc-CCCCEEEEE--EC
Confidence 111 1 23477899999998 667999877 65
No 180
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.68 E-value=6.9e-16 Score=147.39 Aligned_cols=198 Identities=13% Similarity=0.018 Sum_probs=139.3
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-h-c-
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-H-Y- 166 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~-~- 166 (350)
...+...+....+ .. ...|....|..++++++++|+ +|.+.. ++++++ |.|+++++.++...+.. . .
T Consensus 12 ~~~~~~~~~~~~n-~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~---~~~~~~--t~ggt~a~~~al~~~~~~~~~~ 84 (345)
T cd06450 12 PALLLEMLTSAKN-AI-DFTWDESPAATEMEAEVVNWLAKLFGLPSE---DADGVF--TSGGSESNLLALLAARDRARKR 84 (345)
T ss_pred HHHHHHHHHHhcC-CC-CcccccCchhHHHHHHHHHHHHHHhCCCCC---CCCEEE--eCChhHHHHHHHHHHHHHhhhh
Confidence 4555555555552 22 234888889999999999884 454312 457888 99999999875433321 1 1
Q ss_pred -------C--CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEEEecCCCCCCC
Q 018820 167 -------H--QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVLLHACAHNPTG 234 (350)
Q Consensus 167 -------~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG 234 (350)
+ ++.|++++++|..+...++..|.+++.++. +++ +.+|++.+++.+.+ ...+..+++.++|+||||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~-~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG 162 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPV-DED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTG 162 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeee-CCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCC
Confidence 2 347889999999998888888999999998 554 47999999999875 111344778889999999
Q ss_pred CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE-EEEeccccccCccCcceeEEE
Q 018820 235 VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC-FIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 235 ~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RvG~l~ 308 (350)
... ++++|+++|+++|+++++|++|..+.... +. .... . ....++ .+..|++|.++ ++.|+|++.
T Consensus 163 ~~~---~~~~i~~~~~~~~~~l~vD~a~~~~~~~~-~~--~~~~-~-~~~~~~d~~~~s~~K~l~-~p~g~g~~~ 228 (345)
T cd06450 163 AID---PLEEIADLAEKYDLWLHVDAAYGGFLLPF-PE--PRHL-D-FGIERVDSISVDPHKYGL-VPLGCSAVL 228 (345)
T ss_pred CCC---CHHHHHHHHHHhCCeEEEechhhHHHhhC-hh--hHHH-h-cCccccCEEEEchhHhhC-CCcchHHHH
Confidence 874 57888999999999999999998876531 01 1111 1 111123 34569999765 788999864
No 181
>PRK05939 hypothetical protein; Provisional
Probab=99.68 E-value=7.4e-15 Score=143.29 Aligned_cols=160 Identities=18% Similarity=0.216 Sum_probs=121.3
Q ss_pred CCCCCCCCcH---HHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---H
Q 018820 111 KEYLPIVGLA---EFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---V 184 (350)
Q Consensus 111 ~~Y~p~~G~~---~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~ 184 (350)
+.|+- .|.| +|.+.++++. |. +..++ +.+|+.|+.. .+.+.+.+||+|+++++.|+.+.. .
T Consensus 39 ~~Y~r-~g~p~~~~lE~~la~le-g~------~~~v~---~ssG~~Ai~~--~l~all~~Gd~Vv~~~~~y~~t~~~~~~ 105 (397)
T PRK05939 39 FTYAR-QGTPTTAALEAKITKME-GG------VGTVC---FATGMAAIAA--VFLTLLRAGDHLVSSQFLFGNTNSLFGT 105 (397)
T ss_pred CCcCC-CCCHHHHHHHHHHHHHh-CC------CeEEE---eCCHHHHHHH--HHHHHcCCCCEEEECCCccccHHHHHHH
Confidence 34543 3667 8888888874 32 23444 5666889887 455668899999999999987654 4
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++..|++++.++. .|++.+++.+..+++ ++++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 106 l~~~G~~v~~v~~-------~d~e~l~~~l~~~tk---lV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 106 LRGLGVEVTMVDA-------TDVQNVAAAIRPNTR---MVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred HHhcCCEEEEECC-------CCHHHHHHhCCCCCe---EEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccc
Confidence 5578999888865 378899998865444 78889999999987 5688999999999999999999853
Q ss_pred C-CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 265 F-ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 265 ~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
. .++. . ....-+++.|+||.++..|.++|+++
T Consensus 173 ~~~~~~-------~-----~~gaDivv~S~sK~~~g~g~~igg~v 205 (397)
T PRK05939 173 PWLFRP-------K-----DVGASLVINSLSKYIAGHGNALGGAV 205 (397)
T ss_pred ccccCc-------c-----ccCCEEEEecCeecccCCCCeEEEEE
Confidence 2 2110 0 11246889999999999999999987
No 182
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.68 E-value=1e-14 Score=141.42 Aligned_cols=247 Identities=15% Similarity=0.115 Sum_probs=151.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+||..|.....-|. ..+++++++.+.+. ... + . ...+..++++.+++++.... + .+++.+ +++
T Consensus 27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~--~~~-~-~-~~~~~~~~~~~la~~l~~~~-~---~~~~~~--~~s 94 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLD--DIW-H-V-SNLFTNSLQEEVASLLAENS-A---GDLVFF--CNS 94 (377)
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHH--hcc-c-c-ccccCCHHHHHHHHHHHhcC-C---CCEEEE--eCC
Confidence 3556899988852112221 22344444444443 111 1 1 22345788999999864432 2 357888 999
Q ss_pred chhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHH-HHHHcCCeEE---EEEeecCCC--CCCCHHHHHHHhhcCCCCcEE
Q 018820 151 GTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPK-VFTLAGLSVK---SYRYYDPAT--RGLNFQGLLEDLGSAPAGAIV 223 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~-~~~~~G~~~~---~v~~~~~~~--~~~d~~~l~~~l~~~~~~~~~ 223 (350)
|++|...+..+ +...+| +.|++.++.|..... .....|.... ..|..+... .-.|++.+++.+... ..+
T Consensus 95 G~~a~~~A~~~-a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~ 170 (377)
T PRK02936 95 GAEANEAALKL-ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEE---VAA 170 (377)
T ss_pred cHHHHHHHHHH-HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCC---eEE
Confidence 99999886543 233344 679999999874432 2222222110 011100000 012788888887543 347
Q ss_pred EEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 224 LLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 224 l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
+++..++|++|.. .+++.+++|.++|++||+++|+||+|.+|.+.+ + ......+ .....+ .+|||.++ +|+
T Consensus 171 ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g--~-~~~~~~~-~~~~di---~t~sK~l~-~G~ 242 (377)
T PRK02936 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG--T-LFAYEQF-GLDPDI---VTVAKGLG-NGI 242 (377)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--h-hhHHHhh-CCCCcE---EEEccccc-CCC
Confidence 7788889999987 588999999999999999999999999886543 1 1122122 111233 36999999 999
Q ss_pred ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 303 RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 303 RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
|+||++ ++ +.+.+.+.........+.+.++|.++...|+
T Consensus 243 ~ig~v~--~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 281 (377)
T PRK02936 243 PVGAMI--GK-----KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQ 281 (377)
T ss_pred ccEEEE--Ec-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999977 76 4566655443333333578888888777664
No 183
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.67 E-value=1.7e-15 Score=150.19 Aligned_cols=198 Identities=16% Similarity=0.199 Sum_probs=131.6
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC--CcHHHHHHHHHH------HhCCCCCCccCCcEEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV--GLAEFNKLSAKL------ILGADSPAIRENRVTT 145 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~--G~~~lr~aia~~------~~g~~~~~~~~~~v~~ 145 (350)
..++|+.|.+ +. .....++.+...- .....|.|.+ -.+.++++++++ ++|.+ .+++.+
T Consensus 69 ~~~~lg~g~~-~~----~~p~~~~~~~~~~----~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~-----~~~v~~ 134 (447)
T PRK00451 69 YPSFLGAGAY-DH----YIPAVVDHIISRS----EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMD-----VANASM 134 (447)
T ss_pred CcccCccccc-CC----cCcHHHHHHHhch----hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCC-----cceEEe
Confidence 6788999988 42 2234444443221 1112355511 123355555533 34543 457888
Q ss_pred EecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHH----cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 146 VQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTL----AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
|+|+++++.. .++++ ..+||+|++++|.|+.|...++. .|++++.+++ +++ .+|++.+++.+.+++
T Consensus 135 --~~g~t~~~~~--~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~-~~~--~~d~~~l~~~i~~~t-- 205 (447)
T PRK00451 135 --YDGATALAEA--ALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY-EDG--VTDLEALEAAVDDDT-- 205 (447)
T ss_pred --cCcHHHHHHH--HHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC-CCC--CCCHHHHHHhcCCCe--
Confidence 9999998876 34444 36899999999999999887764 6999999998 553 789999999886543
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE--ccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE--eccccc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF--DSAYQGFASGSLDSDAQSVRMFVADGGECFIA--QSYAKN 296 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~--DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~--~S~SK~ 296 (350)
.++++++| ||||.+.+ +++|.++|+++|+++++ |.+..++.. .. ...+..+++. ++|||.
T Consensus 206 -~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~--------~~---~~~~~D~~~~s~~k~~~~ 269 (447)
T PRK00451 206 -AAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK--------PP---GEYGADIVVGEGQPLGIP 269 (447)
T ss_pred -EEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC--------Cc---ccCCCCEEEECCCcCCCC
Confidence 37777888 99999854 77889999999999987 433222110 00 1112223333 489999
Q ss_pred cCccCcceeEEEEeeC
Q 018820 297 LGLYGERVGALSIVCK 312 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~ 312 (350)
+.+.|+|+||+. ++
T Consensus 270 ~~~~Gpg~G~l~--~~ 283 (447)
T PRK00451 270 LSFGGPYLGFFA--TR 283 (447)
T ss_pred CCCCCCCchHHH--hh
Confidence 999999999987 65
No 184
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.67 E-value=1.2e-14 Score=142.48 Aligned_cols=219 Identities=15% Similarity=0.027 Sum_probs=129.8
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHH-HHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQ-QLVNDRSR-----VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~-~l~~~~~~-----~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+.++|+..+|-.... .|.+.++.. .+.. -.. ..-|.+..-..+|++.+|++. |. ++.+++
T Consensus 46 ~~~~~~~s~dylgl~~----~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~l~~~la~~~-g~------~~~~~~- 112 (407)
T PRK09064 46 REVTVWCSNDYLGMGQ----HPKVIEAMIEALDR-CGAGAGGTRNISGTNHYHVELERELADLH-GK------EAALVF- 112 (407)
T ss_pred ceEEEEECCCCcCCCC----CHHHHHHHHHHHHH-cCCCCCCcCcCccCHHHHHHHHHHHHHHh-CC------CcEEEE-
Confidence 5689999888843222 233333333 3321 111 011334445678889998875 42 344553
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~ 225 (350)
++|.++...+...+....+++.|+.....+......++..|++++.++. .|++.+++.++... ++..+++
T Consensus 113 --~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 113 --TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred --CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEE
Confidence 4455565442222222236676665554444444445566777655543 36778887776432 3345888
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcce
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~Rv 304 (350)
+++++||||...+ +++|.++|+++|+++|+||+|....++.. . ......... ....|+++||||.||++|
T Consensus 184 ~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~-g--~g~~~~~~~~~~~div~~t~sKa~g~~G--- 254 (407)
T PRK09064 184 FESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR-G--GGIAERDGLMDRIDIIEGTLAKAFGVMG--- 254 (407)
T ss_pred EeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC-C--CChHHhcCCCCCCeEEEEecchhhhccC---
Confidence 9999999998887 67778899999999999999973222310 1 111111111 123788999999999888
Q ss_pred eEEEEeeCChhHHHHHHHHHHHhhc
Q 018820 305 GALSIVCKTADVAGRVESQVKLVIR 329 (350)
Q Consensus 305 G~l~~v~~~~~~~~~~~~~l~~~~~ 329 (350)
||++ ++ +.+++.+....+
T Consensus 255 G~~~--~~-----~~~~~~l~~~~~ 272 (407)
T PRK09064 255 GYIA--GS-----AALVDAVRSYAP 272 (407)
T ss_pred ceEe--cC-----HHHHHHHHHhCc
Confidence 9876 65 455555555443
No 185
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=9.5e-15 Score=143.02 Aligned_cols=180 Identities=14% Similarity=0.159 Sum_probs=118.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHH-HHHHcC------------CeEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPK-VFTLAG------------LSVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~ 200 (350)
.+++.+ +++|++|...+..+.... ...+.|+..+-+|.+... .....| .+++.+++
T Consensus 97 ~~~~~~--~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 171 (403)
T PRK05093 97 AERVFF--ANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF--- 171 (403)
T ss_pred CCEEEE--eCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC---
Confidence 357888 999999998866543222 123567777777766532 222111 11222222
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP--TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
.|++.+++.+..+ .+++++. |.||+|-++ +.+.+++|+++|++||+++|+||+|.+|.+.+ + ..+..
T Consensus 172 ----~d~~~l~~~l~~~---~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g--~-~~~~~ 240 (403)
T PRK05093 172 ----NDLAAVKAVIDDH---TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG--D-LFAYM 240 (403)
T ss_pred ----CCHHHHHHHhcCC---eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc--c-chhhh
Confidence 2788888887532 3355544 899998775 89999999999999999999999999986653 1 11211
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
.+ ..... +.||||.++ +|+|+||++ ++ +.+.+.+.........+.+.+.|.++...|
T Consensus 241 ~~-~~~pd---i~s~sK~l~-~G~rig~vv--~~-----~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L 297 (403)
T PRK05093 241 HY-GVTPD---ILTSAKALG-GGFPIGAML--TT-----AEIASHFKVGTHGSTYGGNPLACAVAEAVF 297 (403)
T ss_pred hc-CCCCC---EEEeccccc-CCcceEEEE--Ec-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 11 11112 568999999 999999988 77 567666655333333456777787777644
No 186
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.66 E-value=4.9e-15 Score=143.71 Aligned_cols=169 Identities=17% Similarity=0.181 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD 199 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~ 199 (350)
.++++++.+++... .. .+++++ ++|+++|+.+++.. ..+.+||+|+++.|+|..+...+...|++++.+++ +
T Consensus 30 ~~~~~~~e~~la~~-~g---~~~~v~--~~sgt~al~~~l~~-~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~-d 101 (375)
T PRK11706 30 GGFTRRCQQWLEQR-FG---SAKVLL--TPSCTAALEMAALL-LDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-R 101 (375)
T ss_pred CHHHHHHHHHHHHH-hC---CCeEEE--ECCHHHHHHHHHHH-hCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-C
Confidence 34555555542111 11 357888 99999999874322 22579999999999999999999999999999998 7
Q ss_pred CCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC-CCCCCchHHHH
Q 018820 200 PATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS-GSLDSDAQSVR 278 (350)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~-~~~~~~~~~~~ 278 (350)
++++.+|++.+++.+.++++ ++++ .||||...+ +++|+++|+++|++||+|++|..+.. ++ .+..
T Consensus 102 ~~~~~~d~~~le~~i~~~tk---~i~~---~~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~-----~~~g 167 (375)
T PRK11706 102 PDTMNIDETLIEAAITPKTR---AIVP---VHYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKG-----RALG 167 (375)
T ss_pred CCcCCcCHHHHHHhcCCCCe---EEEE---eCCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCC-----eeee
Confidence 77788999999998876433 5553 357997754 67889999999999999999987663 32 1111
Q ss_pred HHhhcCCcEEEEeccc--cccCccCcceeEEEEeeCChhHHHH
Q 018820 279 MFVADGGECFIAQSYA--KNLGLYGERVGALSIVCKTADVAGR 319 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~S--K~~gl~G~RvG~l~~v~~~~~~~~~ 319 (350)
.+ + -+.+.||. |.++ +|.|.+++ +.+++..++
T Consensus 168 ~~---~--~~~~~Sf~~~K~l~-~g~gG~~~---~~~~~~~~~ 201 (375)
T PRK11706 168 TI---G--HIGCFSFHETKNYT-AGEGGALL---INDPALIER 201 (375)
T ss_pred cC---c--CEEEEeCCCCcccc-ccCCeEEE---ECCHHHHHH
Confidence 11 1 12233433 9997 69997754 455544433
No 187
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=8.2e-15 Score=144.33 Aligned_cols=154 Identities=17% Similarity=0.212 Sum_probs=117.2
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~ 194 (350)
...|.+.+|++. |. +..++ ++||++|+.. .+++++.+||+|++++|.|+... ..++..|++++.
T Consensus 66 ~~~Le~~lA~le-g~-------~~al~--~~sG~~Ai~~--al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALE-GG-------IGALA--VSSGQAAITY--SILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHH--HHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 466778888874 32 24455 8999999988 45566889999999999987543 345678999988
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.++++++ ++++++|+||||.+.+. ++|+++|+++|+++|+|++|..-. . .
T Consensus 134 vd~-------~d~e~l~~ai~~~tk---lV~l~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~~-~---~-- 194 (431)
T PRK08248 134 VDP-------SDPENFEAAITDKTK---ALFAETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASPY-L---L-- 194 (431)
T ss_pred ECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCccc-c---C--
Confidence 876 378899998876443 77778999999999985 577889999999999999986211 1 0
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+. +.+ .-+++.|++|.+|.+|.|+|+++
T Consensus 195 ~pl----~~g-aDivv~S~tK~lgg~g~~~Gg~v 223 (431)
T PRK08248 195 RPI----EHG-ADIVVHSATKFIGGHGTSIGGVI 223 (431)
T ss_pred Chh----HcC-CCEEEEcCccccCCCCCceEEEE
Confidence 111 222 34778999999999999999987
No 188
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=4.2e-15 Score=126.36 Aligned_cols=164 Identities=24% Similarity=0.267 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH-HHHHHcCCeEEEEEee
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP-KVFTLAGLSVKSYRYY 198 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~~ 198 (350)
.++++.+++++ +.+ .+++.+ ++|+++|+.+++ .+...++++|++++|+|+.+. ..++..|++++.++.
T Consensus 3 ~~~~~~l~~~~-~~~-----~~~~~~--~~~~t~a~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~- 71 (170)
T cd01494 3 EELEEKLARLL-QPG-----NDKAVF--VPSGTGANEAAL--LALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV- 71 (170)
T ss_pred HHHHHHHHHHc-CCC-----CCcEEE--eCCcHHHHHHHH--HHhCCCCCEEEEeecccceehhhHHHhcCCEEEEecc-
Confidence 57889998885 321 567888 889999998854 344567899999999999998 888999999999987
Q ss_pred cCCC-CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 199 DPAT-RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 199 ~~~~-~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
+.++ ...+++.+++... ..+..++++++++||+|...+. ++|+++|+++|+++|+|++|..+..... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~--~---- 140 (170)
T cd01494 72 DDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP--G---- 140 (170)
T ss_pred CCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc--c----
Confidence 4332 2223334444322 2345688889999999998876 6778889999999999999998876521 0
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
... ......+++.|++|.|+. .|+||++
T Consensus 141 ~~~-~~~~~d~~~~s~~K~~~~--~~~G~l~ 168 (170)
T cd01494 141 VLI-PEGGADVVTFSLHKNLGG--EGGGVVI 168 (170)
T ss_pred ccc-ccccCCEEEEEcccccCC--CceEEEE
Confidence 011 112245778999999973 8999987
No 189
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.66 E-value=1.2e-14 Score=142.15 Aligned_cols=172 Identities=13% Similarity=0.077 Sum_probs=121.0
Q ss_pred CCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCe
Q 018820 117 VGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLS 191 (350)
Q Consensus 117 ~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~ 191 (350)
.+..++++.+.+. ++|.+. .+.+++ +.++++++..+ +...+.+||+|+++++.|+.+ ..+++..|++
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~----~~~vi~--~~~gt~a~~~a--~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~ 109 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKS----GTPFIF--PTTGTGAWESA--LTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFD 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCC----CCEEEE--eCCcHHHHHHH--HHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCc
Confidence 3556666666665 455431 234555 77889998773 344578999999999988665 4667888999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
++.++. +.+ ..+|++.+++.++..+ .+..++++++++||||..++.+++.++++ |+++|+++|+|+++. + +.
T Consensus 110 v~~v~~-~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s-~--g~- 182 (401)
T PLN02409 110 VDVVES-PWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSS-I--GA- 182 (401)
T ss_pred eEEEEC-CCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccc-c--CC-
Confidence 999987 432 4589999999987521 12347777889999999999888877777 999999999999875 2 11
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.++. +...+.. +++.|.+|.++.|. ++||++ .+
T Consensus 183 ----~~id-~~~~~~D-~~~~s~~K~l~~P~-G~G~l~--~~ 215 (401)
T PLN02409 183 ----LDFR-MDEWGVD-VALTGSQKALSLPT-GLGIVC--AS 215 (401)
T ss_pred ----cccc-ccccCcc-EEEEcCccccCcCC-CcceeE--EC
Confidence 0111 1111223 55666699997544 899988 66
No 190
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.66 E-value=1.7e-14 Score=142.26 Aligned_cols=252 Identities=11% Similarity=0.085 Sum_probs=151.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|..-..-|. -...+++...+++. ... +.+.+..+.+... .+++++........ .+++.+ +++
T Consensus 39 dG~~~lD~~~g~~~~~lGh-~~~~i~~a~~~~~~--~~~-~~~~~~~~~~~~~-~la~~l~~~~~~~~-~~~~~f--~~s 110 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLK--KLS-HTCFQVLAYEPYL-ELCEKMNQKVPGDF-AKKTLL--VTT 110 (425)
T ss_pred CCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHh--hCC-CccccccCCHHHH-HHHHHHHHhCCCCC-CCEEEE--eCC
Confidence 3556899977743222221 12333333333333 111 2222323344433 56666433211111 246766 777
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE----------------EEeecCCCCCCC----HHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS----------------YRYYDPATRGLN----FQGL 210 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----------------v~~~~~~~~~~d----~~~l 210 (350)
|++|...+..+.........|+..+++|.+....+...+....+ +|. +.+ +.+ ++.+
T Consensus 111 Gsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~--~~~~~~~~~~l 187 (425)
T PRK08088 111 GSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC-PLH--GVSEDDAIASI 187 (425)
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc-ccc--CccHHHHHHHH
Confidence 88877766555433334455666699998886555443322111 111 111 122 4567
Q ss_pred HHHhhc---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 211 LEDLGS---APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 211 ~~~l~~---~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
++.++. ...-.++++-+..+||+.+.++++.+++|.++|+++|+++|+||+|.+|.+.+ ...+... . ..+
T Consensus 188 ~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~~~---~-~~~ 260 (425)
T PRK08088 188 ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAMEQ---M-GVA 260 (425)
T ss_pred HHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHHhh---c-CCC
Confidence 777752 12335677778889999899999999999999999999999999999875432 1112111 1 234
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
..+.||||.++ +|+|+||++ ++ .++.+.+.........+.+.+.|.++..+|+
T Consensus 261 pdi~s~sK~l~-~G~rig~v~--~~-----~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~ 313 (425)
T PRK08088 261 ADLTTFAKSIA-GGFPLAGVT--GR-----AEVMDAIAPGGLGGTYAGNPIACAAALAVLK 313 (425)
T ss_pred CCEEEEecccc-CCCcceeeE--ec-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 55799999999 999999988 77 5666666555555555678888998888875
No 191
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=7.6e-15 Score=142.39 Aligned_cols=183 Identities=15% Similarity=0.177 Sum_probs=122.4
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC-hHH---HHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN-HPK---VFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~---~~~~~G~~~~~ 194 (350)
..+|++.++++. |. +..++ +.+|+.++.++ +..+.+||+|++++|+|+. |.. .+...|++++.
T Consensus 52 ~~~Le~~lA~l~-g~------~~~~~---~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 52 RAALEELIAVLE-GG------HAGFA---FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred HHHHHHHHHHHh-CC------CceEE---eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 578899998884 43 23344 45556777653 2457899999999999984 432 33457888888
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.++++++ +|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 119 v~~-------~d~~~l~~ai~~~tk---lV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~----- 180 (377)
T PRK07671 119 VDT-------SNLEEVEEAIRPNTK---AIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS----- 180 (377)
T ss_pred ECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC-----
Confidence 754 378999998876544 8888999999998764 6677888999999999999997643321
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVA 344 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~ 344 (350)
+. ..+ --|++.|+||.++-++- -.|+++ +.+++ +.+++...........+...++++.
T Consensus 181 -p~----~~g-~Divv~S~sK~l~G~~~~~~G~~v--~~~~~----l~~~~~~~~~~~g~~~~~~~a~l~~ 239 (377)
T PRK07671 181 -PI----SLG-ADIVLHSATKYLGGHSDVVAGLVV--VNSPE----LAEDLHFVQNSTGGILGPQDSWLLL 239 (377)
T ss_pred -hh----hhC-CeEEEecCcccccCCccceeEEEE--eCcHH----HHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 12 112 24889999999975543 445554 55543 3344444333333344455544443
No 192
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=5e-15 Score=145.25 Aligned_cols=193 Identities=14% Similarity=0.128 Sum_probs=135.1
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~ 194 (350)
...|.+.+|++. |. +..++ +++|+.|+.+ .+++++.+||.|+++.++|...... +...|+++..
T Consensus 63 v~~lE~~la~le-g~-------~~av~--~~SG~aAi~~--al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELE-GG-------VGAVA--TASGQAAIML--AVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHH--HHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 567778888874 32 23555 9999999998 4556688999999999999866555 6778998888
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+.. .+|++.++++++++++ +|++.+|+|||+.+++ +++|+++|+++|+++|+|++|..
T Consensus 131 vd~------~~d~~~l~~~I~~~Tk---~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t---------- 188 (432)
T PRK06702 131 FNP------NLTADEIVALANDKTK---LVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT---------- 188 (432)
T ss_pred ECC------CCCHHHHHHhCCcCCe---EEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc----------
Confidence 744 4688999999987654 6667889999999998 77889999999999999999841
Q ss_pred HHHHHHhhcCCcEEEEecccc-----ccCccCcce-----eEEEEeeCChhHHH-----------------H-HHHHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAK-----NLGLYGERV-----GALSIVCKTADVAG-----------------R-VESQVKL 326 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK-----~~gl~G~Rv-----G~l~~v~~~~~~~~-----------------~-~~~~l~~ 326 (350)
+......+.|. -|+++|+|| ..++.|.++ +|.. +++.+... . +......
T Consensus 189 P~~~~pl~~GA-DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
T PRK06702 189 PYLCQAFEHGA-NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTN--GKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ 265 (432)
T ss_pred hhhCChhhcCC-CEEEEccccccCCCcceeceEEEeCCCccccc--ccccccccccccccccchhhccchhhHHHHHHHH
Confidence 11111111221 288999999 888888887 6654 43332211 1 1111112
Q ss_pred hhcccccCCChhHHHHHHHHhc
Q 018820 327 VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 327 ~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
..+....+.+.+.+.++.+-|+
T Consensus 266 ~~~~~g~~~sp~~a~l~~rgL~ 287 (432)
T PRK06702 266 LLRDYGNCMSPFNAYISNIGLE 287 (432)
T ss_pred HHHHccCCCCHHHHHHHHhccC
Confidence 2333445778888888776654
No 193
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.65 E-value=2.2e-14 Score=140.27 Aligned_cols=239 Identities=15% Similarity=0.064 Sum_probs=137.1
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRV----KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~----~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
.+.++|+..+|...... +.+++++.+.+..-.... .-|....-..+|.+.++++. |. ++ .++ +
T Consensus 45 ~~~~~~~sn~ylgl~~~---p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~-g~------~~-~l~--~ 111 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQH---PEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH-GK------ES-ALV--F 111 (402)
T ss_pred eeEEEeEccCcCCCCCC---HHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh-CC------Ce-EEE--E
Confidence 56899999888443322 223333333333110000 01222223567888888885 42 33 344 5
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~ 227 (350)
++|++|...+...+....+++.|+.....+......++..|+++..++. .|.+.+++.++... ++..+++++
T Consensus 112 ~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e 184 (402)
T TIGR01821 112 TSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFE 184 (402)
T ss_pred CchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence 5567777654333322236776666544444444445667777655433 36777777775432 234588899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+|+||||.+.+ +++|.++|+++|+++|+||+|..-.++..-.. .. ..... ....|+++||||.||++| ||
T Consensus 185 ~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g--~~-~~~~~~~~~div~~t~sKa~g~~G---G~ 255 (402)
T TIGR01821 185 SVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGG--IA-ERDGLMHRIDIIEGTLAKAFGVVG---GY 255 (402)
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCc--cc-hhccCCCCCeEEEEechhhhccCC---ce
Confidence 99999999987 67778999999999999999983223311011 01 11111 123588899999999888 88
Q ss_pred EEEeeCChhHHHHHHHHHHHhhccc-cc-CCChhHHHHHHHHh
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPM-YS-NPPIHGASIVAAIL 347 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~q~i~~~~L 347 (350)
++ ++ +++++.+....+.. ++ +.+...+.++...|
T Consensus 256 i~--~~-----~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL 291 (402)
T TIGR01821 256 IA--AS-----RKLIDAIRSYAPGFIFTTSLPPAIAAGATASI 291 (402)
T ss_pred ee--cC-----HHHHHHHHHhCcCceecCcCCHHHHHHHHHHH
Confidence 66 65 45666665544332 22 34444454444443
No 194
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=9.6e-15 Score=143.63 Aligned_cols=155 Identities=13% Similarity=0.142 Sum_probs=115.7
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH----cCCeEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL----AGLSVK 193 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~ 193 (350)
-..+|.+.+|++. |. + ..++ +++|++|+.+ .+.+++.+||+|+++.|.|......+.. .|+++.
T Consensus 59 t~~~Le~~lA~l~-g~------~-~~l~--~ssG~~Ai~~--al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~ 126 (425)
T PRK06084 59 TNDVLEQRVAALE-GG------V-GALA--VASGMAAITY--AIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETR 126 (425)
T ss_pred hHHHHHHHHHHHh-CC------C-ceeE--ehhHHHHHHH--HHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEE
Confidence 3468888888884 32 2 3445 7888899988 4455678999999999999865554442 455555
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. .|++.+++.+.++++ +|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 127 ~~d~-------~d~e~le~ai~~~tk---lV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----- 188 (425)
T PRK06084 127 FAAH-------DDIAALEALIDERTK---AVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----- 188 (425)
T ss_pred EECC-------CCHHHHHHHhccCCc---EEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 5432 488999998876544 7788999999999997 577889999999999999999743321
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+. ..+ --|++.|++|.++.+|.++|.++
T Consensus 189 -~p~----~~g-aDivv~S~tK~l~G~g~~~gG~v 217 (425)
T PRK06084 189 -RPF----EHG-ADIVVHSLTKYIGGHGTSIGGIV 217 (425)
T ss_pred -Chh----hcC-CCEEEECchhcccccccceeEEE
Confidence 111 111 23889999999999999999977
No 195
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=1.2e-14 Score=141.65 Aligned_cols=181 Identities=14% Similarity=0.186 Sum_probs=123.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~ 194 (350)
..+|++.+|++. |. +..++ +.+|+.++.++ +. .+.+||+|++++|.|+... ..++..|++++.
T Consensus 56 ~~~le~~lA~l~-g~------~~~v~---~~sG~~ai~~~--l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELE-GG------TKGFA---FASGMAAISTA--FL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHh-CC------CCeEE---ECCHHHHHHHH--HH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 567889998884 43 33454 45557788763 33 4679999999999998543 345568999998
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.+.++++ ++++++|+||||.+.+ +++|.++|+++|+++|+|++|..+....
T Consensus 123 v~~-------~d~~~l~~~l~~~tk---lV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~----- 184 (390)
T PRK08064 123 VDM-------TNLEEVAQNIKPNTK---LFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK----- 184 (390)
T ss_pred ECC-------CCHHHHHHhcCCCce---EEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC-----
Confidence 876 268888888866544 8889999999999875 5677888999999999999997654321
Q ss_pred HHHHHHhhcCCcEEEEeccccccCc-cCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGL-YGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl-~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i 342 (350)
+. +.+ .-+++.|+||.++- .|...|+++ +.+++ +.++++.+........+...+.+
T Consensus 185 -~~----~~g-~Divv~S~tK~~~G~~~~laG~~v--~~~~~----~~~~l~~~~~~~g~~~~~~~a~l 241 (390)
T PRK08064 185 -PL----DLG-ADVVLHSATKFLAGHSDVLAGLAV--VKDEE----LAQKLYFLQNSFGAVLGVQDCWL 241 (390)
T ss_pred -ch----hhC-CcEEEeecceeccCCccceeEEEE--eCCHH----HHHHHHHHHHhcCCCCCHHHHHH
Confidence 11 112 34788999999853 345677766 55543 44444444443333344444444
No 196
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.65 E-value=3.4e-15 Score=144.96 Aligned_cols=169 Identities=16% Similarity=0.108 Sum_probs=120.2
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH---HhcC-CCEEEEcCCCCCChHH---HHHHc
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA---RHYH-QRTIYIPQPTWGNHPK---VFTLA 188 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~---~~~~-gd~Vlv~~P~y~~~~~---~~~~~ 188 (350)
..+.+.++++.+++..+.... ++++|++ |+|+++++.++...+. ...+ ++.|+++.+.|+.+.. .++..
T Consensus 38 ~~~~~~l~~a~~~~~~~~~~~--~~~~i~~--t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~ 113 (382)
T TIGR03403 38 TATHPAIAEALDKLYKGINAR--DLDDIII--TSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESL 113 (382)
T ss_pred HHHHHHHHHHHHHHHHHcCcC--CCCeEEE--eCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHC
Confidence 456788999998885333221 2688999 9999999987543221 1144 4789998766665544 35578
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
|++++.+|. +++ +.+|++.+++.+.+.++ ++++++||||||..++. ++|.++|+++|+++++|+++..-..
T Consensus 114 G~~v~~v~~-~~~-g~~d~~~l~~~i~~~t~---lv~~~~~~n~tG~~~~~---~~I~~la~~~g~~~ivD~a~~~g~~- 184 (382)
T TIGR03403 114 GVEVTYLPI-NEQ-GTITAEQVREAITEKTA---LVSVMWANNETGMIFPI---KEIGEICKERGVLFHTDAVQAIGKI- 184 (382)
T ss_pred CCEEEEEec-CCC-CCCCHHHHHHhcccCCe---EEEEEcccCCCccccCH---HHHHHHHHHcCCEEEEechhhcCCC-
Confidence 999999998 543 57899999998876443 78889999999999985 4778889999999999999652111
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
++. +...+.. +++.|+.|.+|.+|+ |+++
T Consensus 185 -------~~~-~~~~~~D-~~~~s~~K~~gp~G~--g~l~ 213 (382)
T TIGR03403 185 -------PVD-VQKAGVD-FLSFSAHKFHGPKGV--GGLY 213 (382)
T ss_pred -------ccC-ccccCCC-EEEEcchhhCCCCce--EEEE
Confidence 111 1122234 778899998887774 7665
No 197
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.64 E-value=3.9e-14 Score=138.35 Aligned_cols=183 Identities=11% Similarity=0.086 Sum_probs=119.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh-------cCC-CEEEEcCCCCCChH-HHHHHcCCe------------EEEEEee
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH-------YHQ-RTIYIPQPTWGNHP-KVFTLAGLS------------VKSYRYY 198 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~ 198 (350)
.+++.+ +++|++|+..+..+.... .+| ++|+..+-+|.... ..+...+.. +..+++
T Consensus 97 ~~~~~~--~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (396)
T PRK04073 97 KDMVLP--MNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY- 173 (396)
T ss_pred CCeEEE--cCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-
Confidence 357888 999999998765543322 134 67777776666543 333332211 122222
Q ss_pred cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQ-QWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~-~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
.|++.+++.+..+ .++++++.++||||..++++ .+++|.++|+++|+++|+||+|.+|...+ .....
T Consensus 174 ------~d~~~l~~~i~~~---~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~ 241 (396)
T PRK04073 174 ------GDLEALKAAITPN---TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC 241 (396)
T ss_pred ------CCHHHHHHhcccC---eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh
Confidence 2788888887543 35788888999999998764 69999999999999999999999986532 11111
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
........+ .+|||.+|.+|+|+||++ ++ +++.+.+.........+.+.+++.++...|+
T Consensus 242 -~~~~~~pdi---~~~sK~lg~gg~~ig~~~--~~-----~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 242 -DWDNVTPDM---YILGKALGGGVFPISCVA--AN-----RDILGVFTPGSHGSTFGGNPLACAVSIAALE 301 (396)
T ss_pred -hhcCCCCCE---EEecccccCCCCcceEEE--Ec-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 111111233 357999998889999987 76 4566655443333334467777777766664
No 198
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.63 E-value=2.4e-14 Score=138.99 Aligned_cols=191 Identities=17% Similarity=0.158 Sum_probs=128.4
Q ss_pred CCCCCCCC--cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----
Q 018820 111 KEYLPIVG--LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---- 184 (350)
Q Consensus 111 ~~Y~p~~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---- 184 (350)
+.|....+ ..+|.+.++++. |. +++++ +++|+.++.++. ..+.+||+|++++|.|..+...
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~-g~-------~~~l~--~~sG~~al~~~l---~ll~~Gd~Vl~~~~~y~~~~~~~~~~ 105 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLD-KA-------DRAFA--FSSGMAALDVIT---RLLNNGDEIIAGDDLYGGTDRLLTQV 105 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH---HHhCCCCEEEEcCCCchHHHHHHHHH
Confidence 44665422 356777777763 42 34555 777788887633 3578999999999999877654
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++..|++++.++. .|++.+++.+++++ .++++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 106 ~~~~G~~v~~vd~-------~d~~~le~~i~~~t---klv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 106 VPRSGVVVVHVDT-------TDLDKVKAALGPKT---KLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred HHHcCcEEEEeCC-------CCHHHHHHhcCcCc---eEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 3457999988876 27889998886544 38889999999999886 78889999999999999999743
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc-cCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL-YGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIV 343 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl-~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~ 343 (350)
.... .+.. .+. -+++.|++|.++- .+.+.|+++ +.+++. .+++..+......+.+...++++
T Consensus 173 ~~~~------~~l~----~g~-Di~v~S~tK~l~G~~~~~~G~v~--~~~~~~----~~~~~~~~~~~G~~~~~~~a~l~ 235 (378)
T TIGR01329 173 PLLC------NPLE----LGA-DIVYHSATKFLAGHSDVMAGVLA--VKGEEI----AKKVYFLQNSTGSGLAPFDCWLL 235 (378)
T ss_pred cccC------Chhh----cCC-cEEEEecceeccCCccceeEEEE--eCcHHH----HHHHHHHHHhcCCcCCHHHHHHH
Confidence 3211 1221 122 3889999998864 357899877 665433 33333333222334445555544
Q ss_pred H
Q 018820 344 A 344 (350)
Q Consensus 344 ~ 344 (350)
.
T Consensus 236 ~ 236 (378)
T TIGR01329 236 L 236 (378)
T ss_pred H
Confidence 3
No 199
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.63 E-value=1.7e-14 Score=139.22 Aligned_cols=193 Identities=11% Similarity=0.119 Sum_probs=130.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
+.....+|.+++|++. | .+++++ ++||++|+.++. ..+.+||+|+++.+.|..-...+.....+. .
T Consensus 52 ~~p~~~~le~~lA~le-g-------~~~~v~--~~sG~aAi~~~l---~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIE-S-------ADYALA--TSSGMSAIVLAF---SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCccHHHHHHHHHHHh-C-------CCeEEE--eCCHHHHHHHHH---HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 3445789999999985 3 357887 999999998843 346899999999999987665544321110 1
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+.. ++..|++.+++.++++++ +|++++|+||||.+. ++++|+++|+++|+++|+|++|..-.+.
T Consensus 118 ~~~----~~~~d~~~l~~~i~~~Tk---lV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~------ 181 (364)
T PRK07269 118 FHF----TYANTEEELIAAIEEDTD---IVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ------ 181 (364)
T ss_pred EEE----EecCCHHHHHHhcCcCce---EEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 111 134688999998876554 889999999999877 5777889999999999999997543222
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.++. .+. -|+++|++|.++-+|- =-||++ +.+++..+++. ..........+.+.++++..-|+
T Consensus 182 ~pl~----~ga-Divv~S~tK~l~g~~d~~gG~v~--~~~~~l~~~~~----~~~~~~G~~~s~~~a~l~~~~L~ 245 (364)
T PRK07269 182 RPIE----LGA-DIVLHSATKYLSGHNDVLAGVVV--TNDLELYEKLF----YNLNTTGAVLSPFDSYLLMRGLK 245 (364)
T ss_pred Cchh----hCC-cEEEecCceeccCCCcccceEEE--eCcHHHHHHHH----HHHHHhCCCCCHHHHHHHHcCCC
Confidence 1221 111 2889999999975554 346655 66655444443 22222234567777777665443
No 200
>PLN02509 cystathionine beta-lyase
Probab=99.62 E-value=3.4e-14 Score=140.63 Aligned_cols=164 Identities=16% Similarity=0.200 Sum_probs=115.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----H
Q 018820 110 VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----F 185 (350)
Q Consensus 110 ~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~ 185 (350)
.+.|... |.+ .++++.+++-.... .++.++ ++||++++.++ +..+.+||+|++++|.|+.+... +
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHH
Confidence 3568665 765 56666666322211 345555 78888888653 24578999999999999988744 4
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
...|++++.++. .|++.+++.+..++ .+|++++|+||||.. .++++|+++|+++|+++|+|++|...
T Consensus 193 ~~~G~~v~~vd~-------~d~e~l~~ai~~~T---klV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 193 PRSGVVVKRVNT-------TNLDEVAAAIGPQT---KLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred HHCCeEEEEeCC-------CCHHHHHHhCCcCC---eEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccc
Confidence 467998887754 36888888886544 388889999999974 77899999999999999999998644
Q ss_pred CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc-eeEEE
Q 018820 266 ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER-VGALS 308 (350)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R-vG~l~ 308 (350)
..+. +. ..+ --+++.|++|.++-+|-= .|+++
T Consensus 260 ~~~~------pl----~~g-aDivv~S~tK~l~G~gdv~gG~v~ 292 (464)
T PLN02509 260 VLSR------PL----ELG-ADIVMHSATKFIAGHSDVMAGVLA 292 (464)
T ss_pred ccCC------hh----hcC-CcEEEecCcccccCCCccceeEEE
Confidence 3321 11 112 247899999998754543 45544
No 201
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.62 E-value=6.2e-14 Score=135.93 Aligned_cols=191 Identities=14% Similarity=0.054 Sum_probs=129.6
Q ss_pred CCCCCCCCc---HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---
Q 018820 111 KEYLPIVGL---AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV--- 184 (350)
Q Consensus 111 ~~Y~p~~G~---~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--- 184 (350)
+.|+. .|. ..|.+.+|++. | .+++++ ++||++|+.. .+.+++.+||.|++++|.|......
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~-g-------~~~~~~--~~sG~~Ai~~--al~all~~GD~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE-G-------GAGCYL--YPSGLAAVTN--SILAFVKAGDHVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh-C-------CCcEEE--ECcHHHHHHH--HHHHhcCCCCEEEEcCCCcHHHHHHHHH
Confidence 45764 565 48999999874 4 246777 9999999988 4566688999999999999876543
Q ss_pred -HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 185 -FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 185 -~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
++..|+++..++. . +.+.+++.++++++ ++++.+|+||||.. .++++|+++|+++|+++|+|++|.
T Consensus 109 ~~~~~gi~v~~~d~---~----~~e~l~~~i~~~tk---lV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 109 VLKRMGVDITYYDP---L----IGEDIATLIQPNTK---VLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred HHHhcCcEEEEECC---C----CHHHHHHhcCCCce---EEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 3567887766543 1 22678777765444 88899999999755 578899999999999999999997
Q ss_pred CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc-CcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHH
Q 018820 264 GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY-GERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~-G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i 342 (350)
.-.... +. +.+ --|+++|++|.++-+ +...|+++ +. ++..+++ ....+....+.++..+..
T Consensus 176 ~g~~~~------pl----~~g-aDivv~S~tK~l~G~~d~~gG~v~--~~-~~~~~~l----~~~~~~~G~~l~p~~a~~ 237 (377)
T TIGR01324 176 AGLLFK------PL----EHG-VDISIQAGTKYLVGHSDIMIGTVV--AN-ARTWDQL----REHSYLMGQMVDADDAYT 237 (377)
T ss_pred cccccC------cc----ccC-ceEEEecCceeccCCCCceEEEEE--eC-HHHHHHH----HHHHHHhCCCCCHHHHHH
Confidence 533211 11 122 237899999999644 46788655 44 4333333 322222333445555555
Q ss_pred HHH
Q 018820 343 VAA 345 (350)
Q Consensus 343 ~~~ 345 (350)
+.+
T Consensus 238 ~~r 240 (377)
T TIGR01324 238 TLR 240 (377)
T ss_pred HHh
Confidence 443
No 202
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.61 E-value=2.9e-14 Score=138.47 Aligned_cols=159 Identities=16% Similarity=0.199 Sum_probs=113.1
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~ 194 (350)
...|.+.++++. |. +..++ +.+|+.|+.++ + ..+.+||+|++++|.|+.... .+...|++++.
T Consensus 52 ~~~Le~~la~l~-g~------~~al~---~~SG~~Al~~~--l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~ 118 (380)
T PRK06176 52 RFALEELIADLE-GG------VKGFA---FASGLAGIHAV--F-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTI 118 (380)
T ss_pred HHHHHHHHHHHh-CC------CCEEE---ECCHHHHHHHH--H-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEE
Confidence 577888888874 42 23344 55667788753 2 457899999999999976543 34567888777
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.++++++ +|++.+|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 119 vd~-------~d~e~l~~ai~~~t~---lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----- 180 (380)
T PRK06176 119 IDT-------SDLSQIKKAIKPNTK---ALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----- 180 (380)
T ss_pred cCC-------CCHHHHHHhcCcCce---EEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC-----
Confidence 654 378899988865443 8888999999999886 5677889999999999999998654321
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChh
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTAD 315 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~ 315 (350)
+. ..+ --+++.|++|.++-+|..+|-++ ++.+++
T Consensus 181 -p~----~~g-aDivv~S~tK~l~g~~d~~gG~v-v~~~~~ 214 (380)
T PRK06176 181 -PL----LLG-ADIVVHSGTKYLGGHSDVVAGLV-TTNNEA 214 (380)
T ss_pred -cc----ccC-CCEEEecCceeccCCccceeeEE-EecHHH
Confidence 11 112 23789999999987776555433 154443
No 203
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.61 E-value=1.4e-13 Score=134.88 Aligned_cols=239 Identities=13% Similarity=0.058 Sum_probs=138.7
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
.+.++|+...|...... +++++++.+.+..-......+....| ..+|.+.++++. |. + +.++ +
T Consensus 45 ~~~~~~~sn~ylgl~~~---p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~-g~------~-~~~~--~ 111 (406)
T PRK13393 45 REVTVWCSNDYLGMGQH---PAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH-GK------E-AALL--F 111 (406)
T ss_pred ccEEEeecccccCCCCC---HHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh-CC------C-cEEE--e
Confidence 56899999888543222 23333333333311000000111122 466778887774 32 2 4444 5
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-CCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-PAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~l~~~ 227 (350)
++|+.|...+...++...+||.|++....+......++..|.+++.++. .|++.+++.++.. +++..+++++
T Consensus 112 ~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~ 184 (406)
T PRK13393 112 TSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFE 184 (406)
T ss_pred CCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEc
Confidence 5566677664433333337787776666666556666777887766654 3677777776543 2234578889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC-cEEEEeccccccCccCcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG-ECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+++||||.+.+ +++|.++|+++++++|+||+|..-.++..-.. . . ....... ..|+++||||.||++| ||
T Consensus 185 ~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g-~-~-~~~~~~~~~~i~~~tlsKa~g~~G---G~ 255 (406)
T PRK13393 185 SVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGG-I-A-EREGLADRLTIIEGTLAKAFGVMG---GY 255 (406)
T ss_pred CCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCc-h-h-hhcCCCCCCeEEEEeCchhhcccC---ce
Confidence 99999999998 67778899999999999999973222311011 1 1 1111112 3677899999999888 88
Q ss_pred EEEeeCChhHHHHHHHHHHHhhccc-cc-CCChhHHHHHHHHh
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPM-YS-NPPIHGASIVAAIL 347 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~q~i~~~~L 347 (350)
++ ++ +.+.+.+....+.. ++ +.+...+..+...|
T Consensus 256 ~~--~~-----~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL 291 (406)
T PRK13393 256 IT--GS-----AALCDFIRSFASGFIFTTSLPPAVAAGALASV 291 (406)
T ss_pred ee--CC-----HHHHHHHHHhCcCceecCccCHHHHHHHHHHH
Confidence 76 65 45555555554432 22 33444444444333
No 204
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.61 E-value=5e-14 Score=136.19 Aligned_cols=164 Identities=16% Similarity=0.135 Sum_probs=119.9
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSV 192 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~ 192 (350)
.+..++|+.+++++ |.. . .++|++ |+|+++++.++ +.+.+.+||+|++++++|+.+.. +.+..|+++
T Consensus 44 ~~~~~~~~~la~~~-~~~-~---~~~v~~--~~g~t~al~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLF-NAP-S---SAHVVF--TNNATTALNIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHh-CcC-C---CCeEEE--eCCHHHHHHHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 56778999999985 432 1 458888 99999999873 45557899999999999887643 344569999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. +. ++.+|++.+++.+.+++ .++++++|+||||..++. ++|.++|+++|+++|+|+++..-... -
T Consensus 115 ~~v~~-~~-~~~~d~~~l~~~~~~~~---~~v~~~~~~n~tG~~~~~---~~i~~l~~~~~~~livD~a~~~g~~~---~ 183 (376)
T TIGR01977 115 TIVKC-DN-EGLISPERIKRAIKTNT---KLIVVSHASNVTGTILPI---EEIGELAQENGIFFILDAAQTAGVIP---I 183 (376)
T ss_pred EEEec-CC-CCCcCHHHHHHhcCCCC---eEEEEECCCCCccccCCH---HHHHHHHHHcCCEEEEEhhhccCccC---C
Confidence 99987 43 45689999999886543 378889999999999985 46788899999999999998543211 0
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+ + ... .--+++.|+.|.++.|. .+|.++
T Consensus 184 ~---~---~~~-~~D~~~~s~~K~l~~p~-g~g~l~ 211 (376)
T TIGR01977 184 D---M---TEL-AIDMLAFTGHKGLLGPQ-GTGGLY 211 (376)
T ss_pred C---c---hhc-CCCEEEecccccccCCC-CceEEE
Confidence 1 1 011 12366788899876332 456655
No 205
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.61 E-value=5.8e-14 Score=135.35 Aligned_cols=165 Identities=13% Similarity=0.102 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEe
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRY 197 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~ 197 (350)
.++|+.+++++ |.... .+.|++ |.|+++++..+ +.++..+||.+++..+.+... ..+++..|++++.+++
T Consensus 38 ~~~r~~la~l~-~~~~~---~~~i~~--t~~~t~al~~~--~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 38 EQIRQQLLALA-TAEEG---YTSVLL--QGSGTFAVEAV--IGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHh-CCCCC---ceEEEE--cCCCHHHHHHH--HHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 45677777764 54211 246888 99999999884 344567888877766665544 3667889999999988
Q ss_pred ecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 198 YDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
++ ++.+|++.+++.++..++ ..++.+++++||||+..+. ++|.++|+++|+++|+|+++ .+.... ..+
T Consensus 110 -~~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~i---~~I~~l~~~~g~~livD~~~-~~g~~~-----~~~ 177 (363)
T TIGR02326 110 -GE-VEPPDVVEVEAILAADPA-ITHIALVHCETTTGILNPI---EAVAKLAHRHGKVTIVDAMS-SFGGIP-----IDI 177 (363)
T ss_pred -CC-CCCCCHHHHHHHHhhCCC-ccEEEEEeecCCccccCcH---HHHHHHHHHcCCEEEEEccc-cccCcc-----cch
Confidence 43 457899999999876443 2356677789999999974 68899999999999999754 342111 111
Q ss_pred HHHhhcCCcEEEEecccccc-CccCcceeEEEEeeC
Q 018820 278 RMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCK 312 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~ 312 (350)
. ..+. -+++.|++|.+ |.+| +||++ ++
T Consensus 178 ~---~~~~-D~~~~s~~K~l~~p~G--~G~l~--~~ 205 (363)
T TIGR02326 178 A---ELHI-DYLISSANKCIQGVPG--FGFVI--AR 205 (363)
T ss_pred h---hcCc-cEEEecCccccccCCc--ceEEE--EC
Confidence 1 1122 26778999987 4445 79987 65
No 206
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=5e-14 Score=136.83 Aligned_cols=170 Identities=12% Similarity=0.073 Sum_probs=119.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
++.++ +.+|++|+.. .+++++.+||.|++++|.|+++.. .++..|+++..++. + +.+.+++.++
T Consensus 80 ~~~v~---~sSG~aAi~~--~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~---~----~~e~l~~al~ 147 (395)
T PRK05967 80 AGTIL---VPSGLAAVTV--PFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP---E----IGAGIAKLMR 147 (395)
T ss_pred CCEEE---ECcHHHHHHH--HHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC---C----CHHHHHHhcC
Confidence 34554 6668899987 456778999999999999999875 44678998877743 1 3577888887
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
++++ +|++++|+|||+ +..++++|+++|+++|+++|+|++|....+- .+. +.|.. |++.|.+|
T Consensus 148 ~~Tk---lV~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~------~pl----~~GaD-ivv~S~tK 210 (395)
T PRK05967 148 PNTK---VVHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYF------RPL----DFGVD-ISIHAATK 210 (395)
T ss_pred cCce---EEEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceec------Chh----HcCCC-EEEEeccc
Confidence 6554 899999999975 7778999999999999999999999764422 121 12222 88999999
Q ss_pred ccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 296 NLG-LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 296 ~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
.++ -.+...|+++ .+++ +.+++.........+.++..++++.+
T Consensus 211 y~~Gh~d~~~G~v~---~~~~----~~~~l~~~~~~~G~~~~p~da~l~~r 254 (395)
T PRK05967 211 YPSGHSDILLGTVS---ANEK----CWPQLLEAHGTLGLCAGPDDTYQILR 254 (395)
T ss_pred ccCCCCCeeEEEEE---cCHH----HHHHHHHHHHHcCCCCCHHHHHHHHc
Confidence 964 2446677443 3443 33334333334455666666665543
No 207
>PRK07505 hypothetical protein; Provisional
Probab=99.60 E-value=2.1e-13 Score=133.44 Aligned_cols=194 Identities=16% Similarity=0.098 Sum_probs=113.9
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-h-cCCC-EEEEcCCCCCChH---HHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-H-YHQR-TIYIPQPTWGNHP---KVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~-~~gd-~Vlv~~P~y~~~~---~~~~~~G~~~ 192 (350)
..+|++.++++. + . +.++ .++|++|...+..+... . .+|+ .|++.+..|..-. ......+.++
T Consensus 93 ~~~l~~~la~~~-~-------~-~~~~--~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v 161 (402)
T PRK07505 93 LKDLEEALSELF-G-------A-SVLT--FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEV 161 (402)
T ss_pred HHHHHHHHHHHh-C-------C-CEEE--ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeE
Confidence 456777777663 2 1 3333 44556677654333321 1 2232 3666665553321 1112235566
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.+|. .|++.+++.+...+. ++++++|+||||.+++ +++|.++|+++++++|+||+|....++.. .
T Consensus 162 ~~~~~-------~d~~~l~~~~~~~~~---~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~-g 227 (402)
T PRK07505 162 ETIDH-------NDLDALEDICKTNKT---VAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKN-G 227 (402)
T ss_pred EEeCC-------CCHHHHHHHHhcCCC---EEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCC-C
Confidence 66665 478899988765433 6777899999999998 57778899999999999999854333321 1
Q ss_pred chHHHHHHhh-cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcc-ccc-CCChhHHHHHHHH
Q 018820 273 DAQSVRMFVA-DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRP-MYS-NPPIHGASIVAAI 346 (350)
Q Consensus 273 ~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~q~i~~~~ 346 (350)
.......+.. ..+++|+++||||.|+++| ||++ +++++ +.+.+...... +++ +++..+..++...
T Consensus 228 ~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~--~~~~~----~~~~~~~~~~~~t~~~~~~~~a~aa~~a~ 295 (402)
T PRK07505 228 EGYVRSELDYRLNERTIIAASLGKAFGASG---GVIM--LGDAE----QIELILRYAGPLAFSQSLNVAALGAILAS 295 (402)
T ss_pred CchHHHHcCCCCCCCeEEEEechhhhhccC---eEEE--eCCHH----HHHHHHHhCCCceeCCCCCHHHHHHHHHH
Confidence 1112222322 3567999999999999776 8765 65543 44444443332 233 3344444444433
No 208
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.60 E-value=2e-13 Score=133.76 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=120.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCCeEEEE----EeecCC---CCCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGLSVKSY----RYYDPA---TRGLN 206 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v----~~~~~~---~~~~d 206 (350)
.+++.+ +++|++|+..+..+.... ..+..|+..+.+|..........+...... ++ .++ ....|
T Consensus 96 ~~~v~~--~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d 172 (406)
T PRK12381 96 ADRVFF--CNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPL-PPDIRHAAYND 172 (406)
T ss_pred CCeEEE--cCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCC-CCCeeEeCCCC
Confidence 468888 999999998876553322 134679999999987754332222211000 00 000 01247
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDP--TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
++.+++.+.. +..++++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.+|...+ + ......+.-.
T Consensus 173 ~~~l~~~l~~---~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G--~-~~~~~~~~v~- 244 (406)
T PRK12381 173 LNSASALIDD---QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG--E-LYAYMHYGVT- 244 (406)
T ss_pred HHHHHHhccC---CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc--c-hhhhHhhCCC-
Confidence 8888888753 2335554 6999998764 79999999999999999999999998885543 1 1221122111
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
.. +.+|||.++ .|+|+||++ ++ +++.+.+.........+.+.+.+.++...|
T Consensus 245 pD---i~t~sK~l~-gG~~ig~~~--~~-----~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l 296 (406)
T PRK12381 245 PD---VLTTAKALG-GGFPIGAML--TT-----EKCASVMTVGTHGTTYGGNPLASAVAGKVL 296 (406)
T ss_pred CC---EEEehhhhh-CCCceEEEE--Ec-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 12 359999999 999999988 76 566666654333333356677777666643
No 209
>PRK05968 hypothetical protein; Provisional
Probab=99.59 E-value=1e-13 Score=135.10 Aligned_cols=185 Identities=16% Similarity=0.166 Sum_probs=124.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~ 194 (350)
..+|+++++++. |. +..+ + +++|+.|+.+ .+.+.+.+||+|+++.|+|.... ..++..|++++.
T Consensus 65 ~~~le~~lA~l~-g~------~~av-~--~~sG~~Ai~~--al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (389)
T PRK05968 65 VRAFEEMLAKLE-GA------EDAR-G--FASGMAAISS--TVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDY 132 (389)
T ss_pred HHHHHHHHHHHh-CC------CcEE-E--ECCHHHHHHH--HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEE
Confidence 468999999884 43 2234 3 6677788877 44556789999999999998643 456678999888
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.+ ..++ ++++. ||||.+++..++++|+++|+++|+++|+|++|....+..
T Consensus 133 vd~-------~d~~~l~~~i-~~tk---lV~ie---~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~----- 193 (389)
T PRK05968 133 VDG-------RDEEAVAKAL-PGAK---LLYLE---SPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR----- 193 (389)
T ss_pred eCC-------CCHHHHHHhc-ccCC---EEEEE---CCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-----
Confidence 754 2788888877 3333 66665 455566778999999999999999999999997665321
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhc-ccccCCChhHHHHHHHHh
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIR-PMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~i~~~~L 347 (350)
+.. .+. -+++.|+||.++.+| .+.|+++ ++ ++ +.++++.... ......+.+.+.++..-|
T Consensus 194 -p~~----~g~-Divv~S~tK~l~g~~~~~gG~i~--~~-~~----~~~~l~~~~~~~~g~~~~~~~A~~~l~~L 255 (389)
T PRK05968 194 -PIT----LGV-DLVIHSASKYLGGHSDTVAGVVA--GS-KE----HIARINAEAYPYLGAKLSPFEAWLLLRGL 255 (389)
T ss_pred -chh----cCC-cEEEeeccccccCCCCeEEEEEE--EC-HH----HHHHHHHHHHHhCCCCCChHHHHHHHccc
Confidence 111 122 377889999998766 5788655 44 33 3343333222 122345556666655444
No 210
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.59 E-value=1.7e-13 Score=133.63 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=122.4
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
|+...+..+|++++|++. |. ++.+++ +.|.+.... .+.+++.+||.|+++++.|..+...++..+.++
T Consensus 39 yg~~~~~~~LE~~lA~~~-g~------e~al~~--~sG~~a~~~---~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~ 106 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFL-GT------ESAILY--SDGASTTSS---TVAAFAKRGDLLVVDRGVNEALLVGVSLSRANV 106 (392)
T ss_pred cCChHHHHHHHHHHHHHh-CC------CcEEEe--cCcHHHHHH---HHHHhCCCCCEEEEeccccHHHHHHHHHcCCeE
Confidence 777778999999999985 43 455665 666555553 344568899999999999998888777778877
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcC--------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSA--------PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~--------~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
+.++..+ .-|++.+.+.+... +++..+|++.+++||+|.+++ +++|.++|++||+++|.||+|.
T Consensus 107 ~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~- 178 (392)
T PLN03227 107 RWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS- 178 (392)
T ss_pred EEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-
Confidence 7776511 12344444444321 123568888999999999999 6678999999999999999997
Q ss_pred CCCCCCCCchHHHHHHh--hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 265 FASGSLDSDAQSVRMFV--ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
|..-+. .-......+. .....-|++.|+||.+| ++.||++ ++ +++++.++.
T Consensus 179 ~g~~g~-~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~--~~-----~~~~~~~~~ 231 (392)
T PLN03227 179 FGTLGK-SGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTV--GS-----EEVVDHQRL 231 (392)
T ss_pred ccccCC-CCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEe--cC-----HHHHHHHHH
Confidence 332110 0001122211 11123688888999764 7778765 55 345544443
No 211
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=2.7e-13 Score=131.41 Aligned_cols=241 Identities=15% Similarity=0.154 Sum_probs=148.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...||+..|.....-|. .|.+.++..+... .. ..+ +..-..++++.+++.+.+. . ...+.+ +++|
T Consensus 28 g~~~lD~~s~~~~~~lG~---~p~v~~a~~~~~~-~~--~~~-~~~~~~~~~~~la~~l~~~--~---~~~~~~--~~SG 93 (375)
T PRK04260 28 GKKYLDFSSGIGVTNLGF---HPQVQQALQKQAG-LI--WHS-PNLYLNSLQEEVAQKLIGD--K---DYLAFF--CNSG 93 (375)
T ss_pred CCEEEECCCCcccccCCC---CHHHHHHHHHHHH-hc--Ccc-cCccCCHHHHHHHHHHhcC--c---CCEEEE--cCcc
Confidence 456899987732122332 2334444443331 11 112 2223467889999876442 1 224566 8999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChH-HHHHHcCCe---------EEEEEeecCCCCCCCHHHHHHHhhcCCCCc
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHP-KVFTLAGLS---------VKSYRYYDPATRGLNFQGLLEDLGSAPAGA 221 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~---------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 221 (350)
++|...+..+.....++++|++.+.+|.... ..+...|.+ +..++. .+ -.|++.+++.+.. +.
T Consensus 94 seA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~dl~~l~~~l~~---~~ 166 (375)
T PRK04260 94 AEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSY-AI---FNDLNSVKALVNK---NT 166 (375)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEE-eC---CCCHHHHHHhcCC---Ce
Confidence 9999876555433445678999999987642 233222221 111222 00 1378888887743 34
Q ss_pred EEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 222 IVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
.++++..++|++|+.. +.+.+++|.++|+++|+++|+||+|.+|...+ ..++.... ..... +.||||.++ +
T Consensus 167 a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~-~ 238 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFEHY-GIEPD---IFTLAKGLA-N 238 (375)
T ss_pred EEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhHhh-CCCCC---EEEeccccc-C
Confidence 5788889999999975 46789999999999999999999999876542 11121121 11223 338999998 8
Q ss_pred CcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 301 GERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 301 G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
|+|+||++ ++ +++.+.+.........+.+.+++.++..+|+
T Consensus 239 G~~ig~~~--~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~ 279 (375)
T PRK04260 239 GVPVGAML--AK-----SSLGGAFGYGSHGSTFGGNKLSMAAASATLD 279 (375)
T ss_pred CcceEEEE--Ec-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999988 77 4555555433233334567778888777763
No 212
>PRK14012 cysteine desulfurase; Provisional
Probab=99.58 E-value=6.1e-14 Score=137.30 Aligned_cols=166 Identities=16% Similarity=0.133 Sum_probs=120.5
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH--hcCCCEEEEcCCCCCChHHHHH---HcCCeE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR--HYHQRTIYIPQPTWGNHPKVFT---LAGLSV 192 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~ 192 (350)
...++|+.+++++ |.+ +++|++ ++|+++++.++...+.. ..+||.|++++++|+.....++ ..|+++
T Consensus 50 ~~~~~r~~ia~~~-g~~-----~~~v~~--~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 50 AVDIARNQIADLI-GAD-----PREIVF--TSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHHHc-CcC-----cCeEEE--eCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEE
Confidence 3567788888874 432 567888 99999999885432221 3689999999999987755544 469999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. ++ ++.+|++.+++.+.++++ ++++++++||||...+ +++|.++|+++|+++|+|+++..-...
T Consensus 122 ~~v~~-~~-~g~~d~~~l~~~i~~~t~---lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~~~---- 189 (404)
T PRK14012 122 TYLDP-QS-NGIIDLEKLEAAMRDDTI---LVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGKVP---- 189 (404)
T ss_pred EEEcc-CC-CCcCCHHHHHHhcCCCCE---EEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCCcc----
Confidence 99987 54 457899999999876543 8888999999999886 568889999999999999987531110
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
..+. ..+.. +++.|+.|.+| |+ ++|+++ +.+
T Consensus 190 --~~~~---~~~~D-~~~~s~~K~~g-p~-g~G~l~--~~~ 220 (404)
T PRK14012 190 --IDLS---KLKVD-LMSFSAHKIYG-PK-GIGALY--VRR 220 (404)
T ss_pred --cCcc---cCCCC-EEEEehhhccC-CC-ceEEEE--Eec
Confidence 0111 11112 45568999876 55 799887 553
No 213
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.58 E-value=1.2e-13 Score=135.63 Aligned_cols=150 Identities=17% Similarity=0.208 Sum_probs=101.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-----HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-----VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
.+|++ + +|+.++.. .+.+++.+||+|+++.|+|..+.. .+...|++++.++. +++++.+|++.+++.++
T Consensus 89 ~~i~~--~-sgt~al~~--~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~ 162 (416)
T PRK00011 89 ANVQP--H-SGSQANAA--VYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV-DEETGLIDYDEVEKLAL 162 (416)
T ss_pred eeeec--C-CchHHHHH--HHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc-CcccCCcCHHHHHHHHH
Confidence 34543 4 45778876 345557899999999999976532 22345678888887 54557899999999986
Q ss_pred c-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEecc
Q 018820 216 S-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQSY 293 (350)
Q Consensus 216 ~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 293 (350)
. +++ +++++.++||+ . .++++|.++|+++|+++|+|++|. ++.+.+ .. + ..+ . + --+++.||
T Consensus 163 ~~~~k---~v~~~~~~~~~--~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g--~~--~-~~~-~-~-~di~~~S~ 226 (416)
T PRK00011 163 EHKPK---LIIAGASAYSR--P---IDFKRFREIADEVGAYLMVDMAHIAGLVAAG--VH--P-SPV-P-H-ADVVTTTT 226 (416)
T ss_pred hcCCC---EEEECCCcCCC--c---cCHHHHHHHHHHcCCEEEEECcchhcccccC--cc--C-CCC-C-C-CcEEEecC
Confidence 5 333 55665555553 2 347888999999999999999974 333221 00 0 011 1 1 23679999
Q ss_pred ccccCccCcceeEEEEeeCChhH
Q 018820 294 AKNLGLYGERVGALSIVCKTADV 316 (350)
Q Consensus 294 SK~~gl~G~RvG~l~~v~~~~~~ 316 (350)
||.+ +|.|.||++ +++++.
T Consensus 227 ~K~l--~g~~gg~i~--~~~~~~ 245 (416)
T PRK00011 227 HKTL--RGPRGGLIL--TNDEEL 245 (416)
T ss_pred CcCC--CCCCceEEE--eCCHHH
Confidence 9975 799999988 765443
No 214
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.58 E-value=6.9e-14 Score=135.06 Aligned_cols=175 Identities=14% Similarity=0.159 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
.++++.+++++ |.+ ++++++ ++|+++++.++...+... .+||+|++++|+|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~-g~~-----~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 62 EEVVGSLGNLL-HLP-----DAYGYI--VSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHh-CCC-----CCCeEE--eccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE
Confidence 55777777764 442 456777 899999986643222111 367899999999999998999999999999
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC--Cc
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD--SD 273 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~--~~ 273 (350)
+. ++ ++.+|++.+++.+.+.+ ..+++ .+|+||||...+ +++|.++|+++|+++++|++|..+...-.. ..
T Consensus 134 ~~-~~-~~~~d~~~l~~~l~~~~--~~vv~-~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 134 PL-DE-DYTVDVKDVEDLIDDNT--IGIVG-IAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred ee-CC-CCCcCHHHHHHHHhhCc--EEEEE-ECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 98 43 46789999999987643 22344 448999999876 566788899999999999999765421000 00
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChh
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTAD 315 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~ 315 (350)
...+ .+...+-.. +..|..| |++++.|+|+++ ..+++
T Consensus 206 ~~~~-d~~~~~~d~-~~~s~~K-~~~~~~~~G~~~--~~~~~ 242 (373)
T TIGR03812 206 PPPF-DFSLPGVQS-ITIDPHK-MGLSPIPAGGIL--FRSKS 242 (373)
T ss_pred CCCc-cccCCCCCE-EEECccc-cCCCcCCceEEE--EeCHH
Confidence 0000 000011122 2345669 777899999876 44443
No 215
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.58 E-value=2.3e-13 Score=133.60 Aligned_cols=184 Identities=12% Similarity=0.092 Sum_probs=125.7
Q ss_pred CcEEEEecCCchh-HHHHHHHHHHHh--c-CCCEEEEcCCCCCChHHHHHHcCCeEEEEEe-ecCCCCCCCHHHHHHHhh
Q 018820 141 NRVTTVQCLSGTG-SLRVGAEFLARH--Y-HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY-YDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 141 ~~v~~~~t~G~~~-al~l~~~l~~~~--~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~ 215 (350)
+..++ ++|+|+ ++.++ +++.- . +||.|+++.-++......+..+|++++.++. .+++++.+|++.++++++
T Consensus 124 ~~a~~--v~~~Tg~al~la--L~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt 199 (444)
T TIGR03531 124 KSAFV--VPLATGMSLSLC--LSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIE 199 (444)
T ss_pred CEEEE--ECCHHHHHHHHH--HHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHH
Confidence 34666 888884 66663 33322 1 5899999988877778888899999999995 367789999999999998
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh----cCCcEEEEe
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA----DGGECFIAQ 291 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~----~~~~vi~~~ 291 (350)
+.+.+.+++++++|+ |+.....+++++|+++|++||+++|+|+||..... ....+.. .+.-.+++.
T Consensus 200 ~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~~~~~~~~g~~~Grad~vv~ 269 (444)
T TIGR03531 200 EIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------KYMELINKAIKVGRVDAVVS 269 (444)
T ss_pred hccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------hhhhhhhccccccCCCeEEE
Confidence 654345577776666 66666789999999999999999999999985331 1111211 111146688
Q ss_pred ccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 292 SYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
|++|++.++|+ |++++ +.|++..++ +....... ..+...+.+...++
T Consensus 270 s~hK~l~~pg~--Gg~I~-~~d~el~~~----i~~~y~g~--~~~s~~~~~~~~ll 316 (444)
T TIGR03531 270 STDKNFMVPVG--GAIIY-SFDENFIQE----ISKSYPGR--ASASPSLDVLITLL 316 (444)
T ss_pred eCccCCCCCCC--EEEEE-ECCHHHHHH----HHHhccCC--CCChHHHHHHHHHH
Confidence 99999999998 55542 556554433 33322221 23345565555544
No 216
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.57 E-value=1.9e-13 Score=132.71 Aligned_cols=178 Identities=19% Similarity=0.178 Sum_probs=124.5
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
|....+..+|++++++++ |. . +.++ ++|+++|+.++ +.++ +.+||+|+++.|+|..+...+...|++
T Consensus 25 ~~~g~~~~~le~~la~~~-g~------~-~~v~--~~sgt~al~~~--l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~ 92 (380)
T TIGR03588 25 LTQGPTVPAFEEALAEYV-GA------K-YAVA--FNSATSALHIA--CLALGVGPGDRVWTTPITFVATANCALYCGAK 92 (380)
T ss_pred ccCChhHHHHHHHHHHHH-CC------C-eEEE--EcCHHHHHHHH--HHHcCCCCCCEEEeCCcchHHHHHHHHHcCCE
Confidence 433445789999999985 43 2 3444 66889999884 4444 579999999999999999999999999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGS 269 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~ 269 (350)
++.+++ +++++.+|++.+++.+++.+ ++..+++ +.||+|...+ +++|.++|+++|+++|+|+++.... +++
T Consensus 93 ~~~~~~-~~~~~~~d~~~l~~~i~~~~~~~t~~v~---~~~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~ 165 (380)
T TIGR03588 93 VDFVDI-DPDTGNIDEDALEKKLAAAKGKLPKAIV---PVDFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGG 165 (380)
T ss_pred EEEEec-CCCcCCcCHHHHHHHhhcccCCCceEEE---EeCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCC
Confidence 999998 66678899999999987310 1122555 3568997654 6788999999999999999987532 321
Q ss_pred CCCchHHHHHHhhcCCcEEEEecc--ccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~--SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
.....+ ..++ +.+.|| +|.++ .| .-|+++ +.+++..+++.
T Consensus 166 -----~~~g~~-~~~d--~~~~S~~~~K~~~-~~-~GG~v~--~~~~~~~~~~~ 207 (380)
T TIGR03588 166 -----KPVGNC-RYAD--ATVFSFHPVKIIT-TA-EGGAVT--TNDEELAERMR 207 (380)
T ss_pred -----EeCCCc-cccc--eEEEecCCCCccc-cc-CceEEE--ECCHHHHHHHH
Confidence 111110 1222 445555 48886 34 567766 77766555443
No 217
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.57 E-value=5.4e-13 Score=130.43 Aligned_cols=196 Identities=13% Similarity=0.092 Sum_probs=122.4
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-------cCC-CEEEEcCCCCCChHHHHHHcCC
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-------YHQ-RTIYIPQPTWGNHPKVFTLAGL 190 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~~~~~~~G~ 190 (350)
..+|-+.++++. + .+++++ +++|++|+..+..++... .+| +.|++..-+|......+...+.
T Consensus 85 ~~~l~~~l~~~~-~-------~~~~~~--~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~ 154 (401)
T PRK00854 85 LAPLYEELAALT-G-------SHKVLP--MNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFST 154 (401)
T ss_pred HHHHHHHHHhhC-C-------CCEEEE--eCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccC
Confidence 345555565542 2 347888 999999998865554322 123 5777777777554322222221
Q ss_pred -------------eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCH-HHHHHHHHHHHhcCcEE
Q 018820 191 -------------SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTL-QQWERIRQLMRSKGLLP 256 (350)
Q Consensus 191 -------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~i 256 (350)
.+..+|. .|++.+++.+.++ ..++++++|+||||.++++ +.+++|.++|++||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~---~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~l 224 (401)
T PRK00854 155 DPDARGGFGPFTPGFRVVPF-------GDAEALEAAITPN---TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTL 224 (401)
T ss_pred CccccccCCCCCCCeEEeCC-------CCHHHHHHHhCCC---eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 1222222 4788999888653 3488889999999999974 56999999999999999
Q ss_pred EEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCC
Q 018820 257 FFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPP 336 (350)
Q Consensus 257 i~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~ 336 (350)
|+||+|.+|...+ . ....... .....+++ +||.++-..||+||++ ++ +++.+.+.........+.+
T Consensus 225 I~DEv~~g~g~~g--~-~~~~~~~-g~~~D~~~---~~K~l~gg~~~ig~v~--~~-----~~~~~~l~~~~~~~t~~~~ 290 (401)
T PRK00854 225 ILDEIQTGLGRTG--K-LLAEEHE-GIEADVTL---IGKALSGGFYPVSAVL--SN-----SEVLGVLKPGQHGSTFGGN 290 (401)
T ss_pred EEechhhCCCCCc--h-HhHHhhc-CCCCCEEE---ecccccCCccCeEEEE--Ec-----HHHHhcccCCCCCCCCCcC
Confidence 9999998876542 1 0111111 11123333 3799974447999987 76 4555555433333333467
Q ss_pred hhHHHHHHHHhc
Q 018820 337 IHGASIVAAILR 348 (350)
Q Consensus 337 ~~~q~i~~~~L~ 348 (350)
.+.+.++...|+
T Consensus 291 ~~~~aa~~a~L~ 302 (401)
T PRK00854 291 PLACAVARAALK 302 (401)
T ss_pred HHHHHHHHHHHH
Confidence 777777666553
No 218
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.57 E-value=2.3e-13 Score=134.41 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=134.7
Q ss_pred EeecccccCCC-CCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 77 NLGVGAYRTEE-GKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 77 ~l~~G~~~~~~-~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
.|++|.+.-.. .+.+..+.++++.+.+. .. ...+++. ..+|++++|+++ |. +++++ ++||++++
T Consensus 27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~--~~-~~~~G~~--~~~fe~~lA~~~-g~-------~~~v~--~~sGt~al 91 (438)
T PRK15407 27 PFVPGKSPIPPSGKVIDAKELQNLVDASL--DF-WLTTGRF--NDAFEKKLAEFL-GV-------RYALL--VNSGSSAN 91 (438)
T ss_pred cccCCCCCCCcCccCCCHHHHHHHHHHHH--hC-cccCChh--HHHHHHHHHHHh-CC-------CeEEE--ECCHHHHH
Confidence 36777762211 11223334444444443 11 1222222 478999999985 43 35777 99999999
Q ss_pred HHHHHHHH-------HhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 156 RVGAEFLA-------RHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 156 ~l~~~l~~-------~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
.++...+. .+.+||+|+++.|+|..+...+...|++++.+++ +++++.+|++.+++.+..+++ +|+++
T Consensus 92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv-d~~~~~id~~~le~~i~~~tk---aVi~~- 166 (438)
T PRK15407 92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV-ELPTYNIDASLLEAAVSPKTK---AIMIA- 166 (438)
T ss_pred HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHcCcCCe---EEEEe-
Confidence 87443221 2478999999999999999999999999999998 666788999999998865433 44443
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC-CCCCCchHHHHHHhhcCCcEEEEecc--ccccCccCccee
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS-GSLDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGERVG 305 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~gl~G~RvG 305 (350)
|++|. +.++++|.++|+++|+++|+|+++..-.. ++ ...- ..++ +.+.|| +|.+. .|.. |
T Consensus 167 --~~~G~---p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g-----~~~G---~~gd--~~~fSf~~~k~~~-~geG-G 229 (438)
T PRK15407 167 --HTLGN---PFDLAAVKAFCDKHNLWLIEDNCDALGSTYDG-----RMTG---TFGD--IATLSFYPAHHIT-MGEG-G 229 (438)
T ss_pred --CCCCC---hhhHHHHHHHHHHCCCEEEEECccchhhhcCC-----eeee---ccCc--eEEEeCCCCCCcc-ccCc-e
Confidence 24453 24678999999999999999999865432 21 1111 1232 334454 57775 5774 8
Q ss_pred EEEEeeCChhHHHHHH
Q 018820 306 ALSIVCKTADVAGRVE 321 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~ 321 (350)
+++ +.|++..+++.
T Consensus 230 ~l~--t~d~~l~~~~~ 243 (438)
T PRK15407 230 AVF--TNDPLLKKIIE 243 (438)
T ss_pred EEE--ECCHHHHHHHH
Confidence 877 88776544433
No 219
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.54 E-value=3.9e-13 Score=129.65 Aligned_cols=174 Identities=14% Similarity=0.183 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh--cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH--YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
.++++.+++++ |.+ +.++++ ++|+++++..+...+... .++++|++.++.|..+...++..|++++.+|.
T Consensus 62 ~~~~~~la~~~-g~~-----~~~~~~--~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~ 133 (371)
T PRK13520 62 EEAVEMLGELL-HLP-----DAYGYI--TSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPL 133 (371)
T ss_pred HHHHHHHHHHh-CCC-----CCCeEE--ecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecC
Confidence 45667777764 532 446777 999999987753332212 25789999999999888888899999999987
Q ss_pred ecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 198 YDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
+. ++.+|++.+++.+.+.+. +++..+++||||...+ +++|.++|+++|+++++|++|.++...-. +.....
T Consensus 134 -~~-~~~~d~~~l~~~i~~~~~---~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~-~~~~~~ 204 (371)
T PRK13520 134 -DD-DYRVDVKAVEDLIDDNTI---GIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFL-DDPPNF 204 (371)
T ss_pred -CC-CCcCCHHHHHHHHhhCCE---EEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhh-cCCCCc
Confidence 43 456899999999975432 4455667899999987 66778889999999999999987652100 100000
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChh
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTAD 315 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~ 315 (350)
.+...+-.. +..|..| |+++|.++|+++ ..+++
T Consensus 205 -~~~~~~vd~-~~~s~~K-~~~a~~~~G~~~--~~~~~ 237 (371)
T PRK13520 205 -DFSLPGVDS-ITIDPHK-MGLAPIPAGGIL--FRDES 237 (371)
T ss_pred -cccCCCCce-EEECCcc-ccCccCCceEEE--EcCHH
Confidence 000011122 2346667 667899999877 55543
No 220
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.54 E-value=1.5e-12 Score=127.23 Aligned_cols=188 Identities=12% Similarity=0.053 Sum_probs=115.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh--------cCCCEEEEcCCCCCChHHH-HHHcCCeEEEEEeecCC--C----CCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH--------YHQRTIYIPQPTWGNHPKV-FTLAGLSVKSYRYYDPA--T----RGL 205 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~--------~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~~v~~~~~~--~----~~~ 205 (350)
+++.+ +++|++|...+..+.... ..++.|++.+-.|...... +...+... .+..+.+. + ...
T Consensus 89 ~~~~~--~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (400)
T PTZ00125 89 DKVLP--MNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPK-CYNNFGPFVPGFELVDYN 165 (400)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcc-hhccCCCCCCCceEeCCC
Confidence 47777 899999998765443211 1346788888777665432 33222211 10000000 0 113
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
|++.+++.++. .+..++++..++||||.+++ .+.+++|.++|++||+++|+||+|.+|...+ + ..... .....
T Consensus 166 d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G--~-~~~~~-~~~~~ 239 (400)
T PTZ00125 166 DVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG--K-LLAHD-HEGVK 239 (400)
T ss_pred CHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--h-hhHHH-hcCCC
Confidence 89999998862 23457777788999999886 5569999999999999999999998875532 1 11111 11111
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
..++ +|||.++..++|+||++ ++ +++.+.+.........+.+.+.+.++...|
T Consensus 240 pd~~---~~sK~l~~g~~~ig~v~--~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l 292 (400)
T PTZ00125 240 PDIV---LLGKALSGGLYPISAVL--AN-----DDVMLVIKPGEHGSTYGGNPLACAVAVEAL 292 (400)
T ss_pred CCEE---EEcccccCCCcCcEEEE--Ec-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence 2333 47899985446999987 76 456665544333333345666777665543
No 221
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.54 E-value=3.7e-13 Score=131.70 Aligned_cols=163 Identities=17% Similarity=0.136 Sum_probs=117.8
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCChHHHH---HHcCCeE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGNHPKVF---TLAGLSV 192 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~ 192 (350)
...++|+.+++++ |.+ +++|++ |+|+++++.+++..+. ...+||+|+++.+.|+.+...+ +..|+++
T Consensus 48 ~~~~~r~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 48 AVENARNQVAELI-GAD-----SREIVF--TSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHh-CCC-----CCeEEE--eCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEE
Confidence 4567788888874 432 678998 9999999987543322 1358899999999998765544 4569999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.+++ ++ ++.+|++.+++.+.+++ .++++++++||||...+ +++|.++|+++|+++++|+++..-.. . -
T Consensus 120 ~~v~~-~~-~~~~d~~~l~~~l~~~~---~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~-~--~ 188 (402)
T TIGR02006 120 TYLPP-KS-NGLIDLEELKAAIRDDT---ILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI-P--I 188 (402)
T ss_pred EEEcc-CC-CCcCCHHHHHHhcCCCC---EEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc-c--c
Confidence 99988 53 45689999999886543 48888999999999986 56788999999999999998753211 1 0
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+ +... .--+++.|+.|.+|.+| +|+++
T Consensus 189 ~------~~~~-~~D~~~~s~~K~~gp~G--~G~l~ 215 (402)
T TIGR02006 189 N------VNEL-KVDLMSISGHKIYGPKG--IGALY 215 (402)
T ss_pred C------cccc-CCCEEEEehhhhcCCCc--eEEEE
Confidence 1 1111 12356677779776445 78776
No 222
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.52 E-value=4e-13 Score=129.08 Aligned_cols=164 Identities=20% Similarity=0.181 Sum_probs=114.3
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh--cCC-CEEEEcCCCCCChH---HHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH--YHQ-RTIYIPQPTWGNHP---KVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~--~~g-d~Vlv~~P~y~~~~---~~~~~~G~~~ 192 (350)
..++|+.+++++ |.+ +++|++ |+|+++++.++...+... .+| +.|++....++.+. ..++..|+++
T Consensus 44 ~~~~r~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v 115 (353)
T TIGR03235 44 VERARKQVAEAL-GAD-----TEEVIF--TSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEEE--eCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEE
Confidence 467888888875 432 578988 999999998753322211 255 77888766665443 3445679999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. ++ ++.+|++.+++.+++++ .++++++++||||...+ +++|.++|+++|+++++|+++.--... -
T Consensus 116 ~~v~~-~~-~~~~d~~~l~~~l~~~~---~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~---~ 184 (353)
T TIGR03235 116 TYLPV-DE-SGRIDVDELADAIRPDT---LLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKIT---V 184 (353)
T ss_pred EEEcc-CC-CCcCCHHHHHHhCCCCC---EEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCcc---c
Confidence 99988 43 45789999999886543 48888999999999987 577889999999999999985422111 0
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+ +...+ --+++.|+.|.+|.+| +|+++ ..
T Consensus 185 ~------~~~~~-~D~~~~s~~K~~gp~g--~g~l~--~~ 213 (353)
T TIGR03235 185 D------LSADR-IDLISCSGHKIYGPKG--IGALV--IR 213 (353)
T ss_pred c------ccccC-CCEEEeehhhcCCCCc--eEEEE--Ec
Confidence 1 11111 2355568889877555 78877 55
No 223
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=4.1e-13 Score=132.30 Aligned_cols=155 Identities=16% Similarity=0.189 Sum_probs=116.0
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~ 194 (350)
..+|.+.++++. |. + ..++ +++|++|+.+ .+.+++.+||+|+++.++|.... ..+...|++++.
T Consensus 65 ~~~le~~lA~l~-g~------~-~al~--~~SG~~Ai~~--al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 65 NAVLEERVAALE-GG------T-AALA--VASGHAAQFL--VFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred HHHHHHHHHHHh-CC------C-cEEE--EcCHHHHHHH--HHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 466788888874 32 2 3445 8889999987 45566889999999999998643 345678999888
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. .|++.+++.+.++++ ++++.+|+||||.+++ +++|+++|+++|+++|+|+++..-...
T Consensus 133 vd~-------~d~~~l~~ai~~~tk---lV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~------ 193 (427)
T PRK05994 133 ADA-------DDPASFERAITPRTK---AIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI------ 193 (427)
T ss_pred ECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC------
Confidence 765 378889988865443 7788999999999997 578899999999999999998642211
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
.+. ..+.. +++.|++|.+|-+|-.+|.+++
T Consensus 194 ~pl----~~gaD-ivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 194 RPI----EHGAD-IVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred Ccc----ccCCc-EEEEcCccccCCCCCcEEEEEE
Confidence 011 11222 7789999999878888887763
No 224
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=2.4e-12 Score=126.99 Aligned_cols=242 Identities=17% Similarity=0.109 Sum_probs=147.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|.....-|. -++.++++..+.+. ... ..|.+..+..+|.+.+++...+ .+++.+ ++|
T Consensus 48 dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~--~~~-~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~s 114 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAE--KGL-SFGAPTELEVELAELVIELVPS-------IEMVRM--VNS 114 (426)
T ss_pred CCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHH--hCC-cCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ecC
Confidence 4667999998864222222 22344444444444 222 3355666667777777766311 457888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH-cC------------CeEE-----EEEeecCCCCCCCHHHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL-AG------------LSVK-----SYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~-----~v~~~~~~~~~~d~~~l~~ 212 (350)
|++|+..+..+......++.|+..+++|.++...+.. .| ...+ .+++ ...|++.+++
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~l~~ 189 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA-----PYNDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc-----CCCCHHHHHH
Confidence 9999988665543333467899999999998633321 11 0000 0111 0137888888
Q ss_pred HhhcCCCCc-EEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 213 DLGSAPAGA-IVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 213 ~l~~~~~~~-~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
.++....+. .+++-+-+.| +|.+++ .+.+++|.++|++||+++|+||+|.+|..+. . .....+... .. +
T Consensus 190 ~i~~~~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~--~--~~~~~~~~~-pD---i 260 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL--G--GAQGYYGVT-PD---L 260 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC--c--cHHHHhCCC-cc---h
Confidence 886433333 3444446666 787776 8889999999999999999999999886542 1 122222111 12 4
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHHHHHH---hhcccccCCChhHHHHHHHHh
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL---VIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~i~~~~L 347 (350)
.+|||.++ .||++|+++ ++ +++.+.+.. .......+.+++.+.++...|
T Consensus 261 ~~~gK~l~-~G~p~ga~~--~~-----~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L 312 (426)
T PRK00062 261 TTLGKIIG-GGLPVGAFG--GR-----REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 312 (426)
T ss_pred HhhhhHhh-CCCcceeee--EH-----HHHHHhhccCCCceecccCcCCHHHHHHHHHHH
Confidence 68999999 999999976 65 455555532 122222245666666655544
No 225
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.50 E-value=5.8e-12 Score=124.01 Aligned_cols=186 Identities=12% Similarity=0.123 Sum_probs=115.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCC-------------eEEEEEeecCCCCCC-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGL-------------SVKSYRYYDPATRGL- 205 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~~~~~~- 205 (350)
+++.+ +++|++|...+..+........+|+...-+|.+... .+...|. .+..+|+.+ +..++
T Consensus 102 ~~~~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~-~~~~~~ 178 (421)
T PRK09792 102 AKTAF--FTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPS-DLHGIS 178 (421)
T ss_pred ceEEE--eCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc-cccccc
Confidence 57887 889999998876654333333678888888876532 2222121 122233311 11122
Q ss_pred ---CHHHHHHHhhc--CCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 206 ---NFQGLLEDLGS--APAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 206 ---d~~~l~~~l~~--~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
+++.+++.++. .+.+..++++..-++|+|+.+ +++.+++|.++|++||+++|+||+|.+|...+ ...+...
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~ 255 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDH 255 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHh
Confidence 24677777653 123334444444599999875 89999999999999999999999999986543 1233333
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHH
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVA 344 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~ 344 (350)
+.... . +.+|||.++ +|+|+||++ ++ +++.+.+.........+.+++++.++.
T Consensus 256 ~~~~p-D---i~t~gK~l~-~G~pigav~--~~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~ 308 (421)
T PRK09792 256 YADKP-D---LMTMAKSLA-GGMPLSGVV--GN-----ANIMDAPAPGGLGGTYAGNPLAVAAAH 308 (421)
T ss_pred cCCCC-c---EEEeehhhc-CCCceEEEE--Ec-----HHHHhccCCCCcCCCCCCCHHHHHHHH
Confidence 31122 2 578999999 999999977 76 455554433222223345666776333
No 226
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.49 E-value=1.3e-12 Score=130.77 Aligned_cols=203 Identities=16% Similarity=0.167 Sum_probs=132.8
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCC---CCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEecC
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEY---LPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y---~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~ 149 (350)
--++.|.+ +.. .+..+++....... . ...+.| ...+|..++++++++++ +|.+ ++.+..+.
T Consensus 71 ~~~g~G~~-~~~---~~p~i~~~~~~~~~-~-~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-------~~~l~~~~ 137 (481)
T PRK04366 71 GFYPLGSC-TMK---YNPKINEKVARLPG-F-AELHPLQPEETVQGALELMYELQEWLKEITGMD-------AVTLQPAA 137 (481)
T ss_pred ceecCccc-CCC---CCHHHHHHHHhCcc-h-hcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-------ceEEEeCc
Confidence 44778877 332 22333333333211 1 123557 34679999999988884 4431 34443366
Q ss_pred CchhHHHHHHHHH-HHhcCCC----EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 150 SGTGSLRVGAEFL-ARHYHQR----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 150 G~~~al~l~~~l~-~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|+++.+..+..+. ....+|| +|++++|.|+.|...++..|++++.+++ +. ++.+|++.+++.+...++ ++
T Consensus 138 GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~-~~-~~~~D~e~L~~~i~~~t~---~V 212 (481)
T PRK04366 138 GAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS-NE-DGLVDLEALKAAVGEDTA---AL 212 (481)
T ss_pred HHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHhhcccCCe---EE
Confidence 6665554322122 1245665 9999999999999999999999999998 53 467999999998865443 67
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc----
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY---- 300 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~---- 300 (350)
++++|| |||.. .+++++|+++|+++|.++++|.++..-..+.. .+. +.+. =+++.|..|.|+.|
T Consensus 213 ~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-----~~~---~~Ga-D~~~~~~hK~l~~P~g~G 280 (481)
T PRK04366 213 MLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA-----RPG---DMGF-DVVHLNLHKTFSTPHGGG 280 (481)
T ss_pred EEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC-----Ccc---ccCC-CEEEEechhhcCCCCCCC
Confidence 778888 99954 45799999999999999999998742111110 011 1122 35667778988755
Q ss_pred CcceeEEE
Q 018820 301 GERVGALS 308 (350)
Q Consensus 301 G~RvG~l~ 308 (350)
|-.+|++.
T Consensus 281 gp~~G~l~ 288 (481)
T PRK04366 281 GPGSGPVG 288 (481)
T ss_pred CCCeeeee
Confidence 56678766
No 227
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=1.3e-11 Score=122.20 Aligned_cols=254 Identities=16% Similarity=0.195 Sum_probs=139.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...||+..|.--..-|. -...++++..+++. ... + +.......+.+..+|+.+...- + ..-++|.+ +++
T Consensus 39 dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~--~~~-~-~~~~~~~~~~~~~la~~L~~~~-p-~~~~~v~f--~~s 109 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGH-NNPRVVKAIKEQTD--KLI-H-YTPIYGFPVEPLLLAEKLIEIA-P-GDNPKVSF--GLS 109 (443)
T ss_pred CCCEEEEccccHhhcccCC-CCHHHHHHHHHHHH--hcc-C-ccccccCcHHHHHHHHHHHHhC-C-CCCCEEEE--cCC
Confidence 3556789877732122222 12333444444443 111 1 1111122334455555543321 1 11257888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChH-HHHHHcCC------------eEEEEEeecCCC--CC--------CCH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP-KVFTLAGL------------SVKSYRYYDPAT--RG--------LNF 207 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~~~~~--~~--------~d~ 207 (350)
|++|...+..+-........|+...-+|.+.. ..+...|. .+..+|+.+... +. .++
T Consensus 110 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 110 GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 99999887665433333466777777776543 22222221 123333311100 10 123
Q ss_pred HHHHHHhhc--CCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 208 QGLLEDLGS--APAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 208 ~~l~~~l~~--~~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+.+++.++. ...+.+++++..-+||||.+++ ++.+++|.++|++||+++|+||+|.+|...+ + ..+...+ ...
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G--~-~~a~~~~-~~~ 265 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG--K-WFAIEHF-GVE 265 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--c-chhhhhc-CCC
Confidence 445566643 1233445555545699999887 5579999999999999999999999986543 1 1122222 112
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+.++ +|||.++ +|+|+||++ ++ +++.+.+.........+.+.+.+.++...|+
T Consensus 266 pDii---tlsK~l~-~G~pigav~--~~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 318 (443)
T PRK08360 266 PDII---TLGKPLG-GGLPISATI--GR-----AEIMDSLPPLAHAFTLSGNPVASAAALAVIE 318 (443)
T ss_pred CCEE---Eeccccc-CCceeEEEE--Ec-----HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHH
Confidence 3444 6799999 999999977 76 4566555443222233455556666665553
No 228
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.47 E-value=2.7e-12 Score=122.82 Aligned_cols=171 Identities=20% Similarity=0.157 Sum_probs=121.9
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVK 193 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 193 (350)
......+|++++++++ |. +++++ +.||++|+.++ +.+. ..+||+|+++.++|..+...+...|++++
T Consensus 16 ~~~~~~~~~~~la~~~-~~-------~~~~~--~~sgt~al~~~--l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~ 83 (352)
T cd00616 16 LGPKVREFEKAFAEYL-GV-------KYAVA--VSSGTAALHLA--LRALGIGPGDEVIVPSFTFVATANAILLLGATPV 83 (352)
T ss_pred CCHHHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEE
Confidence 3345789999999985 42 35666 78899999884 3444 46899999999999999999999999999
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.+++ +++++.+|++.+++.+..++ .++++ .||||...+ +++|.++|+++|+++|+|+++....... .
T Consensus 84 ~~~~-~~~~~~~d~~~l~~~i~~~~---~~v~~---~~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~---~ 150 (352)
T cd00616 84 FVDI-DPDTYNIDPELIEAAITPRT---KAIIP---VHLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYK---G 150 (352)
T ss_pred EEec-CCCcCCcCHHHHHHhcCcCC---eEEEE---ECCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeEC---C
Confidence 9998 65568899999999885433 25554 358998765 5677888999999999999986432211 0
Q ss_pred hHHHHHHhhcCCcEEEEeccc--cccCccCcceeEEEEeeCChhHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYA--KNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~S--K~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
... ... .-+.+.||+ |.+ ++-+.|+++ +.+++..+++
T Consensus 151 -~~~---~~~--~d~~~~S~~~~K~~--~~~~gg~~~--~~~~~~~~~~ 189 (352)
T cd00616 151 -RKV---GTF--GDAGAFSFHPTKNL--TTGEGGAVV--TNDEELAERA 189 (352)
T ss_pred -EEc---ccC--cceeEEcCCCCCCC--cccCceEEE--ECCHHHHHHH
Confidence 001 001 125667766 877 445678877 7765544443
No 229
>PLN00144 acetylornithine transaminase
Probab=99.47 E-value=5.6e-12 Score=122.62 Aligned_cols=193 Identities=18% Similarity=0.142 Sum_probs=120.3
Q ss_pred HHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC-------------CCEEEEcCCCCCChHHHHH-H
Q 018820 122 FNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH-------------QRTIYIPQPTWGNHPKVFT-L 187 (350)
Q Consensus 122 lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~-------------gd~Vlv~~P~y~~~~~~~~-~ 187 (350)
-...+++.+... .+ .++|.+ +++|++|...+..+...... ..+|+...-+|.+...... .
T Consensus 58 ~~~~la~~l~~~-~~---~~~v~f--~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~ 131 (382)
T PLN00144 58 PQVELAKRLVAS-SF---ADRVFF--CNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALAL 131 (382)
T ss_pred HHHHHHHHHHhc-CC---CCeEEE--eCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhc
Confidence 344555554332 12 468888 99999999887554332211 2468888888876643322 2
Q ss_pred cCCe------------EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCc
Q 018820 188 AGLS------------VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGL 254 (350)
Q Consensus 188 ~G~~------------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~ 254 (350)
.+-. +..+|+ .|++.+++.+... +..++++-+. +||.|+.. +.+-+++|.++|++||+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~-~~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~ 202 (382)
T PLN00144 132 TSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQKG-KTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGA 202 (382)
T ss_pred CCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCCC-CeEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 2211 111221 2688888877532 3345666666 99954432 34459999999999999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccC
Q 018820 255 LPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSN 334 (350)
Q Consensus 255 ~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~ 334 (350)
++|+||+|.+|...+ + .++...+.-..+ +.+|||.++ +|+|+||++ ++ +++.+.+.........+
T Consensus 203 llI~DEv~tg~gr~g--~-~~~~~~~~~~PD----i~t~sK~l~-~G~pig~v~--~~-----~~~~~~~~~~~~~~T~~ 267 (382)
T PLN00144 203 LLVFDEVQCGLGRTG--Y-LWAHEAYGVEPD----IMTLAKPLA-GGLPIGAVL--VT-----EKVASAINPGDHGSTFA 267 (382)
T ss_pred EEEEechhhCCCccc--h-HhhhhhcCCCCC----EEEeccccc-CCcceEEEE--Ec-----HHHHhccCCCCCCCCCC
Confidence 999999999986543 1 112112211222 778999998 999999988 77 56666554433333445
Q ss_pred CChhHHHHHH
Q 018820 335 PPIHGASIVA 344 (350)
Q Consensus 335 ~~~~~q~i~~ 344 (350)
.+.+++.++.
T Consensus 268 ~~pl~~aaa~ 277 (382)
T PLN00144 268 GGPLVCNAAL 277 (382)
T ss_pred CCHHHHHHHH
Confidence 6777777777
No 230
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.45 E-value=2.1e-11 Score=119.54 Aligned_cols=202 Identities=15% Similarity=0.109 Sum_probs=125.2
Q ss_pred HHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc------CC-CEEEEcCCCCCChHHH-HHHcCCeEEE
Q 018820 123 NKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY------HQ-RTIYIPQPTWGNHPKV-FTLAGLSVKS 194 (350)
Q Consensus 123 r~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~------~g-d~Vlv~~P~y~~~~~~-~~~~G~~~~~ 194 (350)
...+++.+... .+. .+++.+ +++|++|...+..+..... ++ .+|+...-+|.+.... +...|-....
T Consensus 84 ~~~la~~L~~~-~~~--~~~v~f--~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 84 PLKLAEELVTA-SRF--AEKVFL--CNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred HHHHHHHHHhh-CCC--CCEEEE--cCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 44556654432 111 368888 9999999988765543321 12 4688888888766432 2222211100
Q ss_pred ---EEeecCC---CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCC--HHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 195 ---YRYYDPA---TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPT--LQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 195 ---v~~~~~~---~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s--~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
.|+ .++ -.-.|++.+++.+.. +.+..++..|.+++|-+++ ++.+++|.++|+++|+++|+||+|.+|.
T Consensus 159 ~~~~~~-~~~~~~~~~~d~~~l~~~~~~---~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 234 (408)
T PRK04612 159 EGYEPL-PGGFRYVDFNDVEALEAAMAG---GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMG 234 (408)
T ss_pred cCCCCC-CCCceEcCCCCHHHHHHhhCC---CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 011 000 011378888887753 2234555678899987766 6789999999999999999999999876
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHH
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
..+ + ..... ....+..+.+|||.++ +|+|+||++ ++ +++.+.+.........+.+++++.++...
T Consensus 235 r~G--~---~~a~~--~~~~~pdi~t~~K~l~-~G~piga~~--~~-----~~~~~~~~~~~~~~t~~~~p~~~aaa~a~ 299 (408)
T PRK04612 235 RTG--T---LFAHW--QEQVTPDIVTLAKALG-GGFPIGAML--AG-----PKVAETMQFGAHGTTFGGNPLAAAVARVA 299 (408)
T ss_pred cCC--c---hhhhh--hcCCCCCEEEEcchhc-CCCceEEEE--EC-----HHHHhhhcCCCcCCCCCCCHHHHHHHHHH
Confidence 542 1 11111 1234567889999999 999999987 76 34554444333333334667777777766
Q ss_pred hc
Q 018820 347 LR 348 (350)
Q Consensus 347 L~ 348 (350)
|+
T Consensus 300 L~ 301 (408)
T PRK04612 300 LR 301 (408)
T ss_pred HH
Confidence 54
No 231
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.44 E-value=4.2e-12 Score=123.11 Aligned_cols=162 Identities=20% Similarity=0.210 Sum_probs=113.2
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHH---HHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKV---FTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~ 194 (350)
..++|+.+++++ |.+ +++|++ |+|+++++.++...+.. ..+||+|+++...|+.+... ++..|++++.
T Consensus 44 ~~~~r~~la~~~-g~~-----~~~i~~--t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~ 115 (379)
T TIGR03402 44 VEEAREQVAKLL-GAE-----PDEIIF--TSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEEE--eCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEE
Confidence 456777777774 432 678998 99999999875432211 24568899988888766543 3456999999
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+|. +. ++.+|++.+++.+++++ .++++++++||||..++.+ +|.++|+++|+++++|+++.. +..
T Consensus 116 v~~-~~-~g~~~~~~l~~~i~~~~---~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~~---g~~---- 180 (379)
T TIGR03402 116 LPV-DE-EGRLDLEELRAAITDDT---ALVSVMWANNETGTIFPIE---EIGEIAKERGALFHTDAVQAV---GKI---- 180 (379)
T ss_pred Ecc-CC-CCcCCHHHHHHhcCCCc---EEEEEEcccCCeeecccHH---HHHHHHHHcCCEEEEECcccc---ccc----
Confidence 987 54 35689999999986544 4888899999999999864 678999999999999998752 110
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
++. +...+. -+++.|..|.+|.+| +|+++
T Consensus 181 -~~~-~~~~~~-D~~~~s~~K~~gp~G--~g~l~ 209 (379)
T TIGR03402 181 -PID-LKEMNI-DMLSLSGHKLHGPKG--VGALY 209 (379)
T ss_pred -ccC-cccCCC-CEEEEcHHHcCCCCc--eEEEE
Confidence 100 111111 255667779666455 77766
No 232
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.43 E-value=3.6e-11 Score=117.65 Aligned_cols=197 Identities=16% Similarity=0.132 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-------cC-CCEEEEcCCCCCCh-HHHHHHcCC
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-------YH-QRTIYIPQPTWGNH-PKVFTLAGL 190 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-------~~-gd~Vlv~~P~y~~~-~~~~~~~G~ 190 (350)
.+|.+.+++++ + .+++.+ +++|++|...+..+.... .+ .+.|+...-+|... ...+...|-
T Consensus 82 ~~l~~~l~~~~-~-------~~~~~~--~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~ 151 (401)
T TIGR01885 82 GEFAEYVTKLF-G-------YDKVLP--MNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTD 151 (401)
T ss_pred HHHHHHHHhhc-C-------CCEEEE--eCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCC
Confidence 45555555552 2 247777 999999998765543222 13 35677777777642 333333221
Q ss_pred ------------eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCH-HHHHHHHHHHHhcCcEEE
Q 018820 191 ------------SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTL-QQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 191 ------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii 257 (350)
.++.+++ .|++.+++.++....+..++++...+|++|...++ +.+++|.++|++||+++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli 224 (401)
T TIGR01885 152 PDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLI 224 (401)
T ss_pred cccccccCCCCCCceEeCC-------CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 1223332 26888988886544455677788899999998864 469999999999999999
Q ss_pred EccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCCh
Q 018820 258 FDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPI 337 (350)
Q Consensus 258 ~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 337 (350)
+||+|.+|...+ + .... ........++ .|||.++..|+|+||++ ++ +++.+.+.........+.++
T Consensus 225 ~DEv~~g~g~~G--~-~~~~-~~~~~~~di~---~~gK~l~~g~~~ig~v~--~~-----~~i~~~~~~~~~~~t~~~~p 290 (401)
T TIGR01885 225 ADEIQTGLGRTG--K-LLCV-DHENVKPDIV---LLGKALSGGVYPVSAVL--AD-----DDVMLTIKPGEHGSTYGGNP 290 (401)
T ss_pred EechhhCCCccc--h-hhHH-hhcCCCCCEE---EeeccccCCCCCcEEEE--Ec-----HHHHhhccCCCCCCCCCCCH
Confidence 999998875433 1 1111 1111123444 36799987669999977 66 44555444322222223456
Q ss_pred hHHHHHHHHh
Q 018820 338 HGASIVAAIL 347 (350)
Q Consensus 338 ~~q~i~~~~L 347 (350)
+++.++...|
T Consensus 291 ~~~~aa~a~L 300 (401)
T TIGR01885 291 LACAVAVAAL 300 (401)
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 233
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.43 E-value=3e-11 Score=118.12 Aligned_cols=180 Identities=16% Similarity=0.215 Sum_probs=111.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----C-CCEEEEcCCCCCChH-HHHHHcCCe------------EEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----H-QRTIYIPQPTWGNHP-KVFTLAGLS------------VKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~-gd~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~~~ 200 (350)
.+++.+ +++|++|...+..+..... + .+.|+..+-+|.... ..+...|.. +..+|+
T Consensus 92 ~~~~~f--~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 166 (397)
T TIGR03246 92 ADKVFF--CNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY--- 166 (397)
T ss_pred CCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC---
Confidence 357888 9999999988765543221 2 356777777776553 333333321 122222
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
.|++.+++.+... ..++++...+++.|+.+ +.+.+++|.++|++||+++|+||+|.+|...+ . ......
T Consensus 167 ----~d~~~l~~~l~~~---~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G--~-~~a~~~ 236 (397)
T TIGR03246 167 ----NDLAAAKALISDK---TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG--E-LYAYMH 236 (397)
T ss_pred ----CCHHHHHHHhccC---eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc--c-chhhhh
Confidence 3788898888532 34566554444555443 89999999999999999999999998884432 1 111111
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhc-ccccCCChhHHHHHHHHh
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIR-PMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~i~~~~L 347 (350)
+. -...+ -+|||.++ .|+|+||++ ++ +++.+.+..... .+++ .+.+++.++...|
T Consensus 237 ~g-v~pDi---~t~~K~lg-gG~pigav~--~~-----~~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l 292 (397)
T TIGR03246 237 YG-VTPDI---LTSAKALG-GGFPIGAML--TT-----TEIAAHLKVGTHGTTYG-GNPLACAVAGKVL 292 (397)
T ss_pred cC-CCCCE---EEeehhhh-CCcceeEEE--Ec-----HHHHHhccCCCcCCCCC-CCHHHHHHHHHHH
Confidence 11 11122 37899998 899999988 76 455555543322 3343 4555565555544
No 234
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.42 E-value=4e-11 Score=118.12 Aligned_cols=190 Identities=11% Similarity=0.004 Sum_probs=113.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC-------------eEEEEEeecCCC----
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL-------------SVKSYRYYDPAT---- 202 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~-------------~~~~v~~~~~~~---- 202 (350)
+++.+ +++|++|...+..+-.......+|+...-+|.+.... +...|- .+..+|+.+...
T Consensus 95 ~~v~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
T TIGR00700 95 KKSVF--FNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLL 172 (420)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 57888 9999999988766543333446688778888765432 221111 112222200000
Q ss_pred -----CCCCHHHHHHHhh--cCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 203 -----RGLNFQGLLEDLG--SAPAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 203 -----~~~d~~~l~~~l~--~~~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+.-+++.+++.+. ..+++.+.+++-.-+.-+|..++ ++.+++|.++|++||+++|+||+|.+|.+.+ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~ 249 (420)
T TIGR00700 173 DKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AM 249 (420)
T ss_pred ccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hh
Confidence 0002445666553 22344455555544555777665 5559999999999999999999999996543 11
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
.+...+ ....-+-+|||.++ +|+|+||++ ++ +++.+.+.........+.+.++|.++...|
T Consensus 250 ~a~~~~----~~~pDi~~lsK~l~-~G~pig~v~--~~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 310 (420)
T TIGR00700 250 FACEHE----GPEPDLITTAKSLA-DGLPLSGVT--GR-----AEIMDAPAPGGLGGTYAGNPLACAAALAVL 310 (420)
T ss_pred HHHhhc----CCCCCEEEeecccc-CCcceEEEE--ec-----HHHHhhcCCCCcCCCCCcCHHHHHHHHHHH
Confidence 222211 11222345999999 999999988 76 566665543333334456677777774443
No 235
>PLN02624 ornithine-delta-aminotransferase
Probab=99.42 E-value=6.2e-11 Score=118.38 Aligned_cols=243 Identities=12% Similarity=0.066 Sum_probs=140.8
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||..|.--..-|. -.+.+++++.+++.+- .....+.......+|-+.++++. + .+++.+ +++|
T Consensus 74 G~~ylD~~sg~~~~~~Gh-~~p~v~~ai~~ql~~~-~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SG 141 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGH-CHPKIIKALTEQAEKL-TLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTG 141 (474)
T ss_pred CCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhc-CCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCCh
Confidence 556788876632111221 1234444444444311 11111112333455666666652 2 357888 9999
Q ss_pred hhHHHHHHHHHHHhc-------CCC-EEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCCCCCCCHHHH
Q 018820 152 TGSLRVGAEFLARHY-------HQR-TIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 152 ~~al~l~~~l~~~~~-------~gd-~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~~~~~d~~~l 210 (350)
++|...+..+..... +++ .|+...-+|...... +...|- .+..+|+ .|++.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 214 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDAL 214 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHH
Confidence 999988765433221 133 466666666554222 221111 1122222 268889
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDPTLQQ-WERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
++.++....+..++++..++||+|.++++++ +++|.++|++||+++|.||+|.+|...+ + ..... .......++.
T Consensus 215 ~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG--~-~~a~~-~~~i~pDiv~ 290 (474)
T PLN02624 215 EKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG--K-MLACD-WEEVRPDVVI 290 (474)
T ss_pred HHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc--c-hhhHH-hcCCCCCEEE
Confidence 9888765556678899999999999887764 9999999999999999999999875432 1 11111 1111123443
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
|||.+|..++++|+++ ++ +++...+.........+.+.+.+.++...|
T Consensus 291 ---lsK~lggG~~pigav~--~~-----~~i~~~~~~~~~~~T~~g~pl~~aaa~aaL 338 (474)
T PLN02624 291 ---LGKALGGGVIPVSAVL--AD-----KDVMLCIKPGEHGSTFGGNPLASAVAMAAL 338 (474)
T ss_pred ---ecccccCCCCcceeee--ec-----HHHHhHhccCCcCCCCCCCHHHHHHHHHHH
Confidence 6899997779999987 65 345544433333223345666666665554
No 236
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=5.4e-11 Score=117.17 Aligned_cols=191 Identities=14% Similarity=0.115 Sum_probs=120.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCe-------------EEEEEeecCCCCC-
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLS-------------VKSYRYYDPATRG- 204 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~-------------~~~v~~~~~~~~~- 204 (350)
.+++.+ +++|++|...+..+........+|+...-+|.+...... ..|.. +..+++ .....+
T Consensus 101 ~~~~~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 177 (421)
T PRK06777 101 PAKTAF--FTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGV 177 (421)
T ss_pred CceEEE--eCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCc
Confidence 357888 899999998876554333334568887888876643322 22211 111222 111111
Q ss_pred ---CCHHHHHHHhhc--CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 205 ---LNFQGLLEDLGS--APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 205 ---~d~~~l~~~l~~--~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
.+++.+++.++. .+.+..++++-.-++..|+ .++++.+++|.++|++||+++|+||+|.+|...+ + .++..
T Consensus 178 ~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g--~-~~~~~ 254 (421)
T PRK06777 178 SVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG--K-LFAME 254 (421)
T ss_pred CHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC--c-hhhhh
Confidence 125567776653 2334455666656778886 5889999999999999999999999999986543 1 12222
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+ .....++ +|||.++ .|+|+||++ ++ +++.+.+.........+.+.+++.++...|+
T Consensus 255 ~~-~~~pDiv---~~sK~l~-~G~pigav~--~~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 255 YY-DVKPDLI---TMAKSLG-GGMPISAVV--GR-----AEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred hc-CCCCCEE---eeehhhc-CCCceEEEE--Ec-----HHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 22 1112333 6999999 999999988 76 5565555433333344567788887777764
No 237
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.40 E-value=5.2e-11 Score=118.30 Aligned_cols=189 Identities=15% Similarity=0.134 Sum_probs=111.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-HHcCC-------------eEEEEEeecC--CCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-TLAGL-------------SVKSYRYYDP--ATRG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~--~~~~ 204 (350)
++|.+ +++|++|...+..+-.......+|+...-+|.+..... ...|- .+..+|+.+. ...+
T Consensus 116 ~~v~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (451)
T PRK06918 116 KKVLF--LNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEG 193 (451)
T ss_pred CEEEE--cCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccccccc
Confidence 58888 99999999887665433333466887788887654322 22121 1222222100 0011
Q ss_pred CC--------HHHHHHHhhc--CCCCcEEEEecCCCCCC-CC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 205 LN--------FQGLLEDLGS--APAGAIVLLHACAHNPT-GV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 205 ~d--------~~~l~~~l~~--~~~~~~~l~~~~p~NPT-G~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
.. ++.+++.+.. .+... .-++..|-+.+ |+ .++.+.+++|.++|++||+++|+||+|.+|.+.+ .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g--~ 270 (451)
T PRK06918 194 LTEEQYDDFMIEEFKNFFISEVAPETI-AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG--K 270 (451)
T ss_pred CchHHHHHHHHHHHHHHHHhhcCCCce-EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC--c
Confidence 11 1223333321 22223 33444577766 55 4456669999999999999999999999996543 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
..+...+... .. +.+|||.++ +|+|+||++ ++ +++.+.+.........+.+.+++.++..+|
T Consensus 271 -~~a~~~~~v~-pD---i~t~sK~l~-~G~pig~v~--~~-----~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l 332 (451)
T PRK06918 271 -YFAIEHFDVV-PD---LITVSKSLG-AGVPISGVI--GR-----KEIMDESAPGELGGTYAGSPLGCAAALAVL 332 (451)
T ss_pred -eehhHhcCCC-CC---EEeeehhhc-CCCccEEEE--Ec-----HHHHhccCCCCcCcCCCcCHHHHHHHHHHH
Confidence 1233333111 22 448999999 999999988 76 556655544333344467777887744444
No 238
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.37 E-value=1.8e-11 Score=118.23 Aligned_cols=169 Identities=24% Similarity=0.264 Sum_probs=114.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..+|-+.+++++ | .++++. +++||.|+.++...+ .+.+||+|++|.-+|......+..+|++++.++.
T Consensus 27 ~~~fE~~~a~~~-g-------~~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di- 94 (363)
T PF01041_consen 27 VEEFEKEFAEYF-G-------VKYAVA--VSSGTSALHLALRAL-GLGPGDEVIVPAYTFPATASAILWAGAEPVFVDI- 94 (363)
T ss_dssp HHHHHHHHHHHH-T-------SSEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-B-
T ss_pred HHHHHHHHHHHh-C-------CCeEEE--eCChhHHHHHHHHhc-CCCcCceEecCCCcchHHHHHHHHhccEEEEEec-
Confidence 578999999985 4 346777 999999999954332 2468999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
+++++.+|++.+++.+.++++ .++++|.. .+| .++.+|.++|+++|++||+|.+-.-...-. -+
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~-ai~~~h~~-G~~-------~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~-------g~ 158 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTK-AILVVHLF-GNP-------ADMDAIRAIARKHGIPLIEDAAQAFGARYK-------GR 158 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEE-EEEEE-GG-GB----------HHHHHHHHHHTT-EEEEE-TTTTT-EET-------TE
T ss_pred cCCcCCcCHHHHHHHhccCcc-EEEEecCC-CCc-------ccHHHHHHHHHHcCCcEEEccccccCceeC-------CE
Confidence 888999999999999987653 33333332 332 278999999999999999998765432210 01
Q ss_pred HHhhcCCcEEEEecc--ccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 279 MFVADGGECFIAQSY--AKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~--SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
.....+ -+.+.|| +|.+. .|.. |+++ +.|++..+++.
T Consensus 159 ~~G~~g--d~~~fSf~~~K~i~-~geG-G~v~--~~~~~~~~~~~ 197 (363)
T PF01041_consen 159 PVGSFG--DIAIFSFHPTKIIT-TGEG-GAVV--TNDPELAERAR 197 (363)
T ss_dssp ETTSSS--SEEEEESSTTSSS--SSS--EEEE--ESTHHHHHHHH
T ss_pred eccCCC--CceEecCCCCCCCc-CCCC-eeEE--ecHHHHHHHhh
Confidence 111222 3445555 79885 6766 8877 88776555554
No 239
>PLN02651 cysteine desulfurase
Probab=99.37 E-value=2e-11 Score=117.89 Aligned_cols=162 Identities=20% Similarity=0.141 Sum_probs=112.6
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH--HhcCCCEEEEcCCCCCChHHH---HHHcCCeEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA--RHYHQRTIYIPQPTWGNHPKV---FTLAGLSVK 193 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~--~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~ 193 (350)
..++|+.+++++ |.+ +++|++ |.|+++++.++...+. ...+||+|++++-.|+.+... ++..|++++
T Consensus 45 ~~~~r~~la~~~-g~~-----~~~v~~--t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALI-GAD-----PKEIIF--TSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHh-CCC-----CCeEEE--eCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 446677777764 432 578988 9999999877533221 236789999988666654333 346799999
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. ++ ++.+|++.+++.++++++ ++++++++||||...+ +++|.++|+++|+++++|.++..-.. +. +
T Consensus 117 ~v~~-~~-~~~~d~~~l~~~i~~~t~---lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-~~--~ 185 (364)
T PLN02651 117 YLPV-KS-DGLVDLDELAAAIRPDTA---LVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-PV--D 185 (364)
T ss_pred EEcc-CC-CCcCCHHHHHHhcCCCcE---EEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-cc--C
Confidence 9988 43 457899999999976443 7888999999999987 56778999999999999998753211 11 1
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+...+. =+++.|..| |+ ....+|+++
T Consensus 186 ------~~~~~~-D~~~~s~hK-~~-gp~G~g~l~ 211 (364)
T PLN02651 186 ------VDDLGV-DLMSISGHK-IY-GPKGVGALY 211 (364)
T ss_pred ------cccCCC-CEEEechhh-hC-CCCceEEEE
Confidence 111112 355677789 43 345678776
No 240
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.37 E-value=1.1e-10 Score=112.97 Aligned_cols=206 Identities=13% Similarity=0.018 Sum_probs=119.8
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCC-CCCCCC------CCCcHHHHHHHHHHHhCCCCCCccCCcEE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSR-VKEYLP------IVGLAEFNKLSAKLILGADSPAIRENRVT 144 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~-~~~Y~p------~~G~~~lr~aia~~~~g~~~~~~~~~~v~ 144 (350)
.+.++|+..+|.+....|.+.+.+.+++.....+ +.. .+..+. ..-..++++.+|+++ +. ++.++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~-~~------~~~l~ 76 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH-GA------PEAFI 76 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh-CC------CeEEE
Confidence 4689999999977666666666666666555311 100 111111 122567888888875 43 22344
Q ss_pred EEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCc
Q 018820 145 TVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGA 221 (350)
Q Consensus 145 ~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~ 221 (350)
. +.|. .++.. .......+||.|++..-.+......++......+.++ ..|++.+++.++.. ++..
T Consensus 77 ~--~sG~-~a~~~--~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 77 V--PSGY-MANLG--LCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred E--CChH-HHHHH--HHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 4 5555 34422 2222235677666544343333333443333333332 25888898888642 1234
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
+++++++++|+||.+.+ +++|.++|+++|+++++||+|..-..+ .+...........+..+.+.||||.+|..|
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g---~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G 218 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFG---DDGKGFCHSLGYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccC---CCCCchHHhhCCCCCcEEEEechhhhhcCc
Confidence 56778899999999998 567788899999999999999853332 111111110011122367899999999777
Q ss_pred cc
Q 018820 302 ER 303 (350)
Q Consensus 302 ~R 303 (350)
.+
T Consensus 219 ~~ 220 (370)
T PRK05937 219 AA 220 (370)
T ss_pred eE
Confidence 44
No 241
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=1.7e-11 Score=120.87 Aligned_cols=162 Identities=16% Similarity=0.185 Sum_probs=119.2
Q ss_pred CCCCCCCC--cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---
Q 018820 111 KEYLPIVG--LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF--- 185 (350)
Q Consensus 111 ~~Y~p~~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~--- 185 (350)
+.|.-..+ ..+|++.+|++. |. +..++ +++|++|+.++ +.+++.+||+|+++...|......+
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~-g~-------~~av~--~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~ 123 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALE-GG-------VGAIA--TASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYT 123 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHH
Confidence 34544322 577888898875 32 13455 99999999984 4455789999999999998654444
Q ss_pred -HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 186 -TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 186 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
...|++++.++. + |++.+++.++++++ +|++..|+||||.+.+ +++|.++|+++|+++|+|.++..
T Consensus 124 l~~~Gi~v~~vd~-~------d~~~l~~~i~~~Tk---lV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~ 190 (433)
T PRK08134 124 LRRFGIETTFVKP-G------DIDGWRAAIRPNTR---LLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTT 190 (433)
T ss_pred HhhCCeEEEEECC-C------CHHHHHHhcCCCCe---EEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 457998888865 1 78999999876554 6777889999999997 56778899999999999999753
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
-... .+. ..+ --+++.|.+|.++-+|-.+|.++
T Consensus 191 ~~~~------~pl----~~G-aD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 191 PYLL------RPF----EHG-ADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred cccC------Cch----hcC-CCEEEeccccccCCCCCceEEEE
Confidence 2211 111 112 23778999999987888888876
No 242
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=1.3e-10 Score=114.54 Aligned_cols=186 Identities=12% Similarity=0.099 Sum_probs=115.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-HHcCC-------------eEEEEEeecCCCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-TLAGL-------------SVKSYRYYDPATRGLN 206 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~~~~d 206 (350)
+++.+ +++|++|...+..+........+|+...-+|.+..... ...|. .+..+|+ +.+..+.+
T Consensus 102 ~~v~f--~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 178 (425)
T PRK07495 102 KKTIF--VTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPF-PVELHGVS 178 (425)
T ss_pred CEEEE--CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecC-Cccccccc
Confidence 57888 99999999887655433333467887788886653221 11110 1233333 11112233
Q ss_pred ----HHHHHHHhhc---CCCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 207 ----FQGLLEDLGS---APAGAIVLLHACAHNPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 207 ----~~~l~~~l~~---~~~~~~~l~~~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
++.+++.++. ..+..++++-+..+| +| ..++++.+++|.++|++||+++|+||+|.+|...+ +.+..
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~a~- 253 (425)
T PRK07495 179 VEQSLAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTG---KLFAM- 253 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCC---Cceee-
Confidence 3444665542 223456777777788 88 55899999999999999999999999999885432 11111
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
+....+.-+.+|||.++ .|+|+||++ ++ +++.+.+.........+.+.+++.++..
T Consensus 254 ---~~~gv~pDi~tlsK~l~-~G~pigav~--~~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a 309 (425)
T PRK07495 254 ---EHHEVAADLTTMAKGLA-GGFPLAAVT--GR-----AEIMDAPGPGGLGGTYGGNPLGIAAAHA 309 (425)
T ss_pred ---cccCCCCCEEeehhhhc-CCccceEEE--Ec-----HHHHhccCCCCcCCCCCCCHHHHHHHHH
Confidence 11123445788999998 999999987 76 4555554433333333566666764433
No 243
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.34 E-value=5.4e-11 Score=113.85 Aligned_cols=170 Identities=21% Similarity=0.222 Sum_probs=124.3
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..+|-+++++|+ |. +..+. +++||.|++++...++ +.|||.|++|.-+|....+.+-..|++++.++.
T Consensus 36 v~~FE~~~ae~~-G~-------k~ava--~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDi- 103 (374)
T COG0399 36 VRRFEQAFAEYL-GV-------KYAVA--VSSGTAALHLALLALA-IGPGDEVIVPSFTFVATANAVLLVGAKPVFVDI- 103 (374)
T ss_pred HHHHHHHHHHHh-CC-------CeEEE--ecChHHHHHHHHHhcC-CCCCCEEEecCCchHHHHHHHHHcCCeEEEEec-
Confidence 578999999985 43 45666 8999999999543333 689999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSV 277 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~ 277 (350)
|++++.+|++.+++++.++++ .++.+| -..||. ++++|.++|++||++||+|.+-.- -.|.+ + .
T Consensus 104 d~~T~nid~~~ie~aIt~~tK-AIipVh-l~G~~~-------dm~~i~~la~~~~l~vIEDaAqa~Ga~y~g--k---~- 168 (374)
T COG0399 104 DPDTLNIDPDLIEAAITPRTK-AIIPVH-LAGQPC-------DMDAIMALAKRHGLPVIEDAAQAHGATYKG--K---K- 168 (374)
T ss_pred CCcccCCCHHHHHHHcccCCe-EEEEeh-hccCCC-------CHHHHHHHHHHcCCeEEEEcchhccCeecC--c---c-
Confidence 999999999999999988754 434443 334443 678889999999999999987542 22222 1 1
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
....|+-.++-.=-+|+++ .| --|.++ +.|++..++++
T Consensus 169 --vGt~Gd~~~fSF~~~K~it-tg-EGGav~--tnd~ela~k~~ 206 (374)
T COG0399 169 --VGSFGDIGAFSFHATKNLT-TG-EGGAVV--TNDEELAEKAR 206 (374)
T ss_pred --cccccceEEEEecCCCCcc-cc-CceEEE--eCCHHHHHHHH
Confidence 1122332333333479998 77 447766 88876655554
No 244
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.28 E-value=1.2e-09 Score=107.65 Aligned_cols=222 Identities=16% Similarity=0.128 Sum_probs=127.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHH-HHHHhhcCCCCCC-CCCCCCc----HHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKA-EQQLVNDRSRVKE-YLPIVGL----AEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a-~~~l~~~~~~~~~-Y~p~~G~----~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
..+.++|+..+|..... .+.++++ .+.+.+ -+.... =.-..|. .+|-+++|+++ |. +..++
T Consensus 101 ~r~~l~FsSndYLGL~~----~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~-------e~all 167 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSS----HPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLK-KK-------EDCLV 167 (476)
T ss_pred CceEEEeeccCccCCCC----CHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHH-CC-------CcEEE
Confidence 34679999998854332 3333333 333321 110000 0013444 67888899885 43 23444
Q ss_pred EecCCchhHHHHHHHHHH-H-----------hcCCCEEEEcCCCCCChHHHHHHc----CCeEEEEEeecCCCCCCCHHH
Q 018820 146 VQCLSGTGSLRVGAEFLA-R-----------HYHQRTIYIPQPTWGNHPKVFTLA----GLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~-~-----------~~~gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~ 209 (350)
.++|..|...+...+. . ..++|.|+.-.-.......-++.. +++++.|+. -|++.
T Consensus 168 --~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~ 238 (476)
T PLN02955 168 --CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYH 238 (476)
T ss_pred --ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHH
Confidence 5666655533211111 0 123444544333333333334444 456666554 47899
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
|++.++..+....+|+...--++.|...+ +++|.++|++||.++|+||++..+..|.--.- ....+.-..+..|+
T Consensus 239 Le~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G--~~e~~g~~~di~ii 313 (476)
T PLN02955 239 LNSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGG--VAEEFNCEADVDLC 313 (476)
T ss_pred HHHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCc--HHHHhCCCCCCcEE
Confidence 99988765444456666666889998888 66778888999999999999998887631011 22223222457899
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcc
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRP 330 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~ 330 (350)
+.||||.|| .+-||+. ++ +.+++.++...+.
T Consensus 314 ~~TLsKA~G---~~GGfi~--gs-----~~~~~~l~~~~~~ 344 (476)
T PLN02955 314 VGTLSKAAG---CHGGFIA--CS-----KKWKQLIQSRGRS 344 (476)
T ss_pred EEeCccchh---ccCceee--cH-----HHHHHHHHHhCCC
Confidence 999999976 5558755 65 3455555544433
No 245
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.28 E-value=4.1e-10 Score=111.13 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=114.3
Q ss_pred CCCCC--CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----H
Q 018820 112 EYLPI--VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----F 185 (350)
Q Consensus 112 ~Y~p~--~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~ 185 (350)
.|+.. .-...|.+.++++. |. +..++ +.+|+.|+.. .+++++.+||.|+++...|...... +
T Consensus 62 ~Ysr~~~p~~~~Le~~lA~l~-g~-------~~av~--~sSG~aAi~~--al~all~~Gd~Vv~~~~~y~~t~~~~~~~l 129 (436)
T PRK07812 62 IYTRIMNPTQDVVEQRIAALE-GG-------VAALL--LASGQAAETF--AILNLAGAGDHIVSSPRLYGGTYNLFHYTL 129 (436)
T ss_pred cccCCCCchHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHH--HHHHHhCCCCEEEEeCCcchHHHHHHHHHh
Confidence 46642 22457888888774 32 23455 7888999887 4566788999999998888765543 3
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
...|++++.++ +. .|++.+++.++++++ +|++.+|+||||.+.+. ++|+++|+++|+++|+|+++..-
T Consensus 130 ~~~Gi~v~~vd--d~----~d~e~l~~ai~~~tk---lV~ie~~sNp~G~v~Dl---~~I~~la~~~gi~liVD~t~a~~ 197 (436)
T PRK07812 130 PKLGIEVSFVE--DP----DDLDAWRAAVRPNTK---AFFAETISNPQIDVLDI---PGVAEVAHEAGVPLIVDNTIATP 197 (436)
T ss_pred hcCeEEEEEEC--CC----CCHHHHHHhCCCCCe---EEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCccc
Confidence 44677776663 11 388899888865443 78889999999999875 56688899999999999986531
Q ss_pred CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 266 ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
... .+ + ..+.. +++.|++|.+|-.|--+|++++
T Consensus 198 ~~~------~p---l-~~GaD-ivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 198 YLI------RP---L-EHGAD-IVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred ccC------Cc---h-hcCCC-EEEEecccccCCCCCeEEEEEE
Confidence 111 11 1 22334 4569999999878877888773
No 246
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.25 E-value=5e-10 Score=108.87 Aligned_cols=183 Identities=12% Similarity=0.028 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEE
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSY 195 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v 195 (350)
..|-+.+|++ .| .+..++ +.+|+.|+.. .+++++.+||.|++++..|.+....+ +..|+++..+
T Consensus 65 ~~le~~la~L-Eg-------~~~a~~--~~SGmaAi~~--~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v 132 (395)
T PRK08114 65 FSLQEAMCEL-EG-------GAGCAL--YPCGAAAVAN--AILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred HHHHHHHHHH-hC-------CCeEEE--EhHHHHHHHH--HHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 3455556554 22 235555 8889999987 44566889999999998887666554 5679988887
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCCCCCCCCCCc
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~~~~~ 273 (350)
+. .|.+.+++.++.+++ +|++.+|.||||.+.+ +++|+++|+++ |+++++|.++.--..-
T Consensus 133 d~-------~d~~~l~~~l~~~Tr---lV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~----- 194 (395)
T PRK08114 133 DP-------LIGADIAKLIQPNTK---VVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLF----- 194 (395)
T ss_pred CC-------CCHHHHHHhcCCCce---EEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccccc-----
Confidence 54 367889998876544 8899999999998886 56778888887 5999999988542211
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
.+. +.+ -=++++|.+|.++-+| .-.| ++ +.+++ +.+.+...........++..++++.+
T Consensus 195 -~pl----~~G-aDivv~S~tKyl~Ghsdv~~G-~v--~~~~~----~~~~l~~~~~~~G~~~~p~~a~l~~r 254 (395)
T PRK08114 195 -KAL----DFG-IDISIQAGTKYLVGHSDAMIG-TA--VANAR----CWEQLRENSYLMGQMVDADTAYMTSR 254 (395)
T ss_pred -CHH----HcC-CcEEEEcCcccccCCCcceeE-EE--EcCHH----HHHHHHHHHHhccCCCCHHHHHHHHc
Confidence 111 112 2377999999886666 5566 33 34443 23333333334445667777766543
No 247
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.25 E-value=3.2e-10 Score=110.02 Aligned_cols=196 Identities=17% Similarity=0.190 Sum_probs=125.9
Q ss_pred CCCCCCCCc---HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-
Q 018820 111 KEYLPIVGL---AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT- 186 (350)
Q Consensus 111 ~~Y~p~~G~---~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~- 186 (350)
+.|+-. |. ..|.+.++++- | .+..++ +++|..|+.. .+++++.+||.|++++..|.+-...++
T Consensus 47 ~~Y~R~-gnPt~~~le~~la~Le-~-------g~~a~~--~~SGmaAi~~--~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~ 113 (386)
T PF01053_consen 47 YIYSRY-GNPTVRALEQRLAALE-G-------GEDALL--FSSGMAAISA--ALLALLKPGDHIVASDDLYGGTYRLLEE 113 (386)
T ss_dssp CSBTTT-C-HHHHHHHHHHHHHH-T--------SEEEE--ESSHHHHHHH--HHHHHS-TTBEEEEESSSSHHHHHHHHH
T ss_pred cceecc-ccccHHHHHHHHHHhh-c-------ccceee--ccchHHHHHH--HHHhhcccCCceEecCCccCcchhhhhh
Confidence 456443 43 34556666653 3 245666 8999999987 567778999999999999988877665
Q ss_pred ---HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC-cEEEEccCC
Q 018820 187 ---LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG-LLPFFDSAY 262 (350)
Q Consensus 187 ---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~-~~ii~DeaY 262 (350)
..|+++..++. -|++.++++++++++ +|++-+|.|||..++ ++++|+++|+++| +++|+|+.+
T Consensus 114 ~l~~~gv~v~~~d~-------~d~~~l~~~l~~~t~---~v~~EspsNP~l~v~---Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 114 LLPRFGVEVTFVDP-------TDLEALEAALRPNTK---LVFLESPSNPTLEVP---DLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp CHHHTTSEEEEEST-------TSHHHHHHHHCTTEE---EEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTT
T ss_pred hhcccCcEEEEeCc-------hhHHHHHhhccccce---EEEEEcCCCcccccc---cHHHHHHHHHHhCCceEEeeccc
Confidence 46888876643 489999999987544 899999999996555 5678899999998 999999988
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHH
Q 018820 263 QGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i 342 (350)
.....- .++ ..| --|++.|.||.++-.|--+|-+++ +.+. ..+..+++...+......+...+.+
T Consensus 181 atp~~~------~pL----~~G-aDivv~S~TKyl~Ghsdv~~G~vv-~~~~---~~~~~~l~~~~~~~G~~~~p~da~l 245 (386)
T PF01053_consen 181 ATPYNQ------NPL----ELG-ADIVVHSATKYLSGHSDVMGGAVV-VNGS---SELYDRLREFRRLLGATLSPFDAWL 245 (386)
T ss_dssp THTTTC-------GG----GGT--SEEEEETTTTTTTSSSE-EEEEE-ESSH---HHHHHHHHHHHHHHT-B--HHHHHH
T ss_pred cceeee------ccC----cCC-ceEEEeeccccccCCcceeeEEEE-ECch---hhhhhhhcchhhhcCccchHHHHHH
Confidence 654321 122 112 237789999998645544444432 5542 2333334444444445566676666
Q ss_pred HHHHh
Q 018820 343 VAAIL 347 (350)
Q Consensus 343 ~~~~L 347 (350)
+.+=|
T Consensus 246 l~rgl 250 (386)
T PF01053_consen 246 LLRGL 250 (386)
T ss_dssp HHHHH
T ss_pred HhcCC
Confidence 55433
No 248
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.9e-09 Score=105.36 Aligned_cols=167 Identities=21% Similarity=0.170 Sum_probs=121.1
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHH----HHHHcCCeE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPK----VFTLAGLSV 192 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~ 192 (350)
-+++.|+.+++++ +.+. .++|++ |.|+|+++++++.-+.. +.+||+|++.+--++.... +.+..|+++
T Consensus 67 ~~e~aRe~va~~~-~a~~----~~eIvf--t~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v 139 (405)
T COG0520 67 LYEAAREAVARFL-NADS----SDEIVF--TRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV 139 (405)
T ss_pred HHHHHHHHHHHHh-CCCC----CCeEEE--eCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEE
Confidence 3577888998885 4321 478999 99999999987644432 5789999999877654433 334679999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.+|. + +++.++.+.+++.+.++++ ++.++.-+|-||++.+ +++|+++|+++|+++++|-+ |....-.+
T Consensus 140 ~~i~~-~-~~g~~~~~~~~~~i~~~Tk---lvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaa-q~~~h~~i-- 208 (405)
T COG0520 140 RVIPL-D-DDGLLDLDALEKLITPKTK---LVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAA-QAAGHLPI-- 208 (405)
T ss_pred EEEec-C-CCCCcCHHHHHHhcCCCce---EEEEECccccccccch---HHHHHHHHHHcCCEEEEECc-cccCccCC--
Confidence 99999 5 4568999999998877666 8899999999999887 67789999999999999975 33322211
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
| +.. -+.=+++.|--|.++-| -.+|.+. +.
T Consensus 209 d---v~~----l~~Df~afsgHKwl~gP-~GiGvLy--~r 238 (405)
T COG0520 209 D---VQE----LGCDFLAFSGHKWLLGP-TGIGVLY--VR 238 (405)
T ss_pred C---chh----cCCCEEEEcccccccCC-CceEEEE--Ec
Confidence 1 111 12446788999944325 4667666 55
No 249
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1.9e-09 Score=106.66 Aligned_cols=192 Identities=15% Similarity=0.111 Sum_probs=110.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC-------------eEEEEEeecCCC--C
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL-------------SVKSYRYYDPAT--R 203 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~-------------~~~~v~~~~~~~--~ 203 (350)
.+.+.+ +++|++|...+..+.........|+..+-+|...... +...+- .+..+|+.+... .
T Consensus 103 ~~~v~f--~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK08117 103 LDCFFF--SNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK 180 (433)
T ss_pred CCEEEE--eCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccc
Confidence 457887 9999999988765432233336687777777654322 111110 112233211000 0
Q ss_pred C--------CCHHHHHHHhhc--CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 204 G--------LNFQGLLEDLGS--APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 204 ~--------~d~~~l~~~l~~--~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+ -+++.+++.+++ .+.+.+++++-.-..-.|.. ++++.+++|.++|++||+++|+||+|.+|...+ +
T Consensus 181 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G--~ 258 (433)
T PRK08117 181 GEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG--E 258 (433)
T ss_pred cCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc--c
Confidence 0 145556666653 22334445544333344554 579999999999999999999999999985432 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
......+ + -..-+.+|||.++ .|+++|+++ +. +++.+.+.........+.+++++.++...|+
T Consensus 259 -~~~~~~~---g-v~pDi~t~sK~lg-~G~pigav~--~~-----~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 259 -WFAAQTF---G-VVPDIMTIAKGIA-SGLPLSAVV--AS-----KELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred -chhHhhc---C-CCCCEeehhhhcc-CCCcceeEE--Ec-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 1111111 1 1122469999999 999999877 65 4555544332222223456666666665553
No 250
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.20 E-value=1.8e-09 Score=106.57 Aligned_cols=163 Identities=13% Similarity=0.122 Sum_probs=113.3
Q ss_pred CCCCCCCC--cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HH
Q 018820 111 KEYLPIVG--LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KV 184 (350)
Q Consensus 111 ~~Y~p~~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~ 184 (350)
..|.-..+ ...|++.++++. |. ++.|+ +.+|+.|+.+ .+++++.+||+|++++..|.... ..
T Consensus 61 ~~Y~r~~~pt~~~le~~la~l~-g~------~~~v~---fsSG~~Ai~~--al~~ll~~Gd~VI~~~~~y~~t~~~~~~~ 128 (437)
T PRK05613 61 PIYSRLTNPTVEALENRIASLE-GG------VHAVA---FASGQAAETA--AILNLAGAGDHIVTSPRLYGGTETLFLVT 128 (437)
T ss_pred ceeeCccChHHHHHHHHHHHHh-CC------CeEEE---eCCHHHHHHH--HHHHhcCCCCEEEECCCccHHHHHHHHHH
Confidence 34554322 456777777774 32 23444 6666688876 44556789999999999998764 34
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++..|++++.++. + .|++.+++.++++++ +|++..+.||+|.+.+ +++|.++|+++|+++|+|.+...
T Consensus 129 l~~~Gi~v~~vd~--~----~d~e~l~~~l~~~tk---~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~ 196 (437)
T PRK05613 129 LNRLGIEVTFVEN--P----DDPESWQAAVQPNTK---AFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIAT 196 (437)
T ss_pred HHhcCeEEEEECC--C----CCHHHHHHhCCccCe---EEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcc
Confidence 4678999888762 2 278899998876544 6667789999997776 56778889999999999998743
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
...- .+. ..+. -+++.|++|.++-.|.-+|-++
T Consensus 197 g~~~------~p~----~~Ga-Divv~S~~K~l~G~gd~~gG~v 229 (437)
T PRK05613 197 AALV------RPL----ELGA-DVVVASLTKFYTGNGSGLGGVL 229 (437)
T ss_pred cccc------ChH----HhCC-CEEEeeccceecCCCcceeEEE
Confidence 2111 111 1122 4778899999886677777766
No 251
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.19 E-value=2.1e-09 Score=104.95 Aligned_cols=204 Identities=12% Similarity=0.111 Sum_probs=134.5
Q ss_pred HHHHHH-HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE
Q 018820 94 NVVRKA-EQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY 172 (350)
Q Consensus 94 ~~v~~a-~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl 172 (350)
..+.++ ...+. .++ -.|.......+|.+++++++ |. +.++. +++|+.|++++ +...+.|||.|
T Consensus 50 ~aMs~~q~a~~~--~GD-e~yag~~s~~~lE~~va~~~-G~-------~~av~--v~sGT~Al~ll--~~l~l~pGDeV- 113 (450)
T TIGR02618 50 NAMSDKQWAGLM--MGD-EAYAGSRNFYHLERTVRELY-GF-------KYVVP--THQGRGAENLL--SQIAIKPGDYV- 113 (450)
T ss_pred HHHHHHHHHHhh--hcc-hhhcCCCcHHHHHHHHHHHH-CC-------CeEEE--cCCHHHHHHHH--HHhCCCCcCEE-
Confidence 455555 33332 232 24877777889999999984 53 46777 99999999874 34457899977
Q ss_pred EcCCCCC-ChHHHHHHcCCeEEEEEee--------cCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCC-CCCCCCCHHH
Q 018820 173 IPQPTWG-NHPKVFTLAGLSVKSYRYY--------DPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHN-PTGVDPTLQQ 241 (350)
Q Consensus 173 v~~P~y~-~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~N-PTG~~~s~~~ 241 (350)
+.++|. .+.......|+.++.++.. ++.++.+|++.+++.++... .+..++.+.+++| ..|..++.++
T Consensus 114 -psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~ 192 (450)
T TIGR02618 114 -PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMAN 192 (450)
T ss_pred -CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHH
Confidence 677774 4444478889877777541 24457899999999998632 1222455566777 5589999999
Q ss_pred HHHHHHHHHhcCcEEEEccCCCC----CC------CCCCCCchH-HHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 242 WERIRQLMRSKGLLPFFDSAYQG----FA------SGSLDSDAQ-SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 242 ~~~i~~~~~~~~~~ii~DeaY~~----~~------~~~~~~~~~-~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
++++.++|++||+.+++|-+-.. |. +.+ .+.+ -.+.+.... .. ++.|.-|+++ ..+|-+++
T Consensus 193 l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~--~~i~ei~~e~~~~a-D~-~~~S~~Kd~~---~~~GG~l~- 264 (450)
T TIGR02618 193 MREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYED--KSIAEILKEMMSYA-DG-CTMSGKKDCL---VNIGGFLC- 264 (450)
T ss_pred HHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccC--CCHHHHHHHHhccC-cE-EEEeeccCCC---CCCceEEE-
Confidence 99999999999999999987543 21 211 1111 113333222 23 7889999876 44454441
Q ss_pred eCChhHHHHHHH
Q 018820 311 CKTADVAGRVES 322 (350)
Q Consensus 311 ~~~~~~~~~~~~ 322 (350)
+.|++..+++..
T Consensus 265 ~~d~~l~~k~r~ 276 (450)
T TIGR02618 265 MNDDEMFQSAKE 276 (450)
T ss_pred eCCHHHHHHHHH
Confidence 477665555544
No 252
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.16 E-value=1e-08 Score=101.61 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=106.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcC-------C-----eEEEEEeecCCCC--C----CCHH
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAG-------L-----SVKSYRYYDPATR--G----LNFQ 208 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------~-----~~~~v~~~~~~~~--~----~d~~ 208 (350)
+++|++|...+..+........+|+...-+|........ ..| . .+..+|+.+.... . .+.+
T Consensus 108 ~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 108 GPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 689999998876654333334678888888877754332 222 0 1222333111000 0 0111
Q ss_pred ----HHHHHhh---cC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 209 ----GLLEDLG---SA-PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 209 ----~l~~~l~---~~-~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
.+++.+. .. .+..++++-+.++|+..+.++++.+++|.++|++||+++|+||+|.+|...+ ..+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 1233332 11 2335566666666676667899999999999999999999999999996532 11233233
Q ss_pred hhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHH-HhhcccccCCChhHHHHHHHHh
Q 018820 281 VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK-LVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 281 ~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~q~i~~~~L 347 (350)
.-...+++ |||.++. |+++|+++ +. +++ ..+. ..+..++ +.+++++.++...|
T Consensus 265 -gv~PDiv~---~gK~l~~-G~Pigav~--~~-----~~~-~~~~~~~~~~T~-~gnpla~aaa~a~L 318 (442)
T TIGR00709 265 -GIEPDFVV---MSKAVGG-GLPLAVLL--IA-----PEF-DAWQPAGHTGTF-RGNQLAMVTGTEAL 318 (442)
T ss_pred -CCCCcEEE---EcccccC-CcccEEEE--Ec-----hHH-hccCCCcCCCCC-CcCHHHHHHHHHHH
Confidence 11224444 7999995 99999988 65 222 2221 1223333 45666666666555
No 253
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.16 E-value=4.6e-09 Score=101.30 Aligned_cols=186 Identities=16% Similarity=0.173 Sum_probs=126.5
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~ 194 (350)
...|-++++++- | .++.+. +++|..|+.. .++.++.+||.|++++..|......+ +..|+++..
T Consensus 65 ~~~lE~~~a~LE-g-------~~~~~a--fsSGmaAI~~--~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~ 132 (396)
T COG0626 65 RDALEEALAELE-G-------GEDAFA--FSSGMAAIST--ALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTF 132 (396)
T ss_pred HHHHHHHHHHhh-C-------CCcEEE--ecCcHHHHHH--HHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEE
Confidence 455666666653 2 345566 8999999988 46677889999999999998876655 467877776
Q ss_pred EEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
++- .+.+.+++.+.+ +++ +|++-+|.|||-.+. ++.+|+++|+++|+++|+|+.|..-.+-.
T Consensus 133 ~d~-------~~~~~~~~~~~~~~tk---~v~lEtPsNP~l~v~---DI~~i~~~A~~~g~~vvVDNTfatP~~q~---- 195 (396)
T COG0626 133 VDP-------GDDEALEAAIKEPNTK---LVFLETPSNPLLEVP---DIPAIARLAKAYGALVVVDNTFATPVLQR---- 195 (396)
T ss_pred ECC-------CChHHHHHHhcccCce---EEEEeCCCCcccccc---cHHHHHHHHHhcCCEEEEECCcccccccC----
Confidence 643 245566666654 444 899999999996665 56778999999999999999987654321
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhc-ccccCCChhHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIR-PMYSNPPIHGASIVAA 345 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~i~~~ 345 (350)
++ +.| -=|+++|.+|.++-.+-=+|-++ +++++ ++.+++....+ .+....+.+.++++.+
T Consensus 196 --PL----~~G-aDIVvhSaTKyl~GHsDvl~G~v-~~~~~----~~~~~~~~~~~~~~G~~l~p~dA~l~lR 256 (396)
T COG0626 196 --PL----ELG-ADIVVHSATKYLGGHSDVLGGVV-LTPNE----ELYELLFFAQRANTGAVLSPFDAWLLLR 256 (396)
T ss_pred --hh----hcC-CCEEEEeccccccCCcceeeeEE-ecChH----HHHHHHHHHHHhhcCCCCCHHHHHHHHh
Confidence 22 122 24789999999976666666644 23433 33343333333 2455666777666544
No 254
>PRK04311 selenocysteine synthase; Provisional
Probab=99.15 E-value=8.2e-09 Score=102.46 Aligned_cols=208 Identities=17% Similarity=0.181 Sum_probs=127.8
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC---CC--cHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI---VG--LAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~---~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
.+||.+--.+.+..|.++..+.+.++....... ....+|.-. .| ...+++.++++. |. +..++ +
T Consensus 80 ~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g~r~~~~e~~lA~l~-Ga-------e~a~v--v 148 (464)
T PRK04311 80 PVINATGVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYDLATGKRGSRDRALAALLCALT-GA-------EDALV--V 148 (464)
T ss_pred ceecCCccEEeccCCCCCCCHHHHHHHHHHHhc-ccccccchhhcccchHHHHHHHHHHHHh-CC-------CeEEE--E
Confidence 477766444445555555556666665554422 112233221 12 257788888874 43 24555 7
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC------hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN------HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
++++.|+.++. ..+.+||.|++++..+.. ....++..|++++.++. +. ..+++.+++.+.++++
T Consensus 149 ~sgtaAl~l~l---~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~-~~---~t~~~dle~aI~~~Tk--- 218 (464)
T PRK04311 149 NNNAAAVLLAL---NALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT-TN---RTHLRDYEQAINENTA--- 218 (464)
T ss_pred CCHHHHHHHHH---HHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC-CC---CCCHHHHHHhcCccCe---
Confidence 88889997743 335789999998763321 23456788999998875 22 3578889998876554
Q ss_pred EEEecCCCCCC--CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC----CCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 223 VLLHACAHNPT--GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA----SGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 223 ~l~~~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~----~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
+++...+.||+ |.. ...++++|+++|++||+++++|.+.+.+. ++ + ...+.+......+. =++++|..|.
T Consensus 219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~g-l-~~~p~~~~~l~~Ga-Div~fSg~K~ 294 (464)
T PRK04311 219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYG-L-PDEPTVQELLAAGV-DLVTFSGDKL 294 (464)
T ss_pred EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhcc-C-CCCCchhhHHhcCC-cEEEecCccc
Confidence 77778899994 532 12357888999999999999999643321 11 0 00012222222332 3778999998
Q ss_pred cCccCcceeEEE
Q 018820 297 LGLYGERVGALS 308 (350)
Q Consensus 297 ~gl~G~RvG~l~ 308 (350)
+|-+ ..|+++
T Consensus 295 LgGp--~~G~i~ 304 (464)
T PRK04311 295 LGGP--QAGIIV 304 (464)
T ss_pred ccCC--ceEEEE
Confidence 8634 588766
No 255
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.13 E-value=3e-09 Score=101.93 Aligned_cols=207 Identities=19% Similarity=0.161 Sum_probs=141.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRV-KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~-~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.+.+.|..+... ..++-+++.+++.......++... +.|-...+..+-|+.+|+++... +++|++ |.
T Consensus 40 ~~~~~vyld~~at~--p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF--ts 109 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG--PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF--TS 109 (428)
T ss_pred CCCccEEEecCcCC--CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE--eC
Confidence 45678888888762 112445555555544444333332 22323445788999999997433 456999 99
Q ss_pred CchhHHHHHHHHHHHhcCCC----EEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 150 SGTGSLRVGAEFLARHYHQR----TIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
|+|+++.++..=.. ...+| .|++.+--|+.....+ +..|++++.+|. + ++...|.+.+++.++.+++
T Consensus 110 ~ATEs~Nlvl~~v~-~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv-~-~~~~~d~~~~~~~i~~~T~--- 183 (428)
T KOG1549|consen 110 GATESNNLVLKGVA-RFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPV-E-DSGLVDISKLREAIRSKTR--- 183 (428)
T ss_pred CchHHHHHHHHHhh-ccccccccceEEEecccCcchhHHHHHHHhcCeEEEEecc-C-ccccccHHHHHHhcCCCce---
Confidence 99999999543222 22455 8888888888776654 467899999999 5 4567899999999988665
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
++.+..-+|=+|+..+. ++|+++|+++++.++.|.|-+ .|-..-| +..+ .-=++.-|.-|.||-+|
T Consensus 184 lv~I~~Vnn~~gv~~Pv---~EI~~icr~~~v~v~~DaAQa---vG~i~vD---V~el----n~D~~s~s~HK~ygp~~- 249 (428)
T KOG1549|consen 184 LVSIMHVNNEIGVLQPV---KEIVKICREEGVQVHVDAAQA---VGKIPVD---VQEL----NADFLSISAHKIYGPPG- 249 (428)
T ss_pred EEEEEecccCccccccH---HHHHHHhCcCCcEEEeehhhh---cCCcccc---HHHc----CchheeeecccccCCCc-
Confidence 67777789999999985 666889999999999998653 1211111 2222 11244567789999999
Q ss_pred ceeEEE
Q 018820 303 RVGALS 308 (350)
Q Consensus 303 RvG~l~ 308 (350)
+|+++
T Consensus 250 -iGaLY 254 (428)
T KOG1549|consen 250 -IGALY 254 (428)
T ss_pred -ceEEE
Confidence 99988
No 256
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=2e-08 Score=99.59 Aligned_cols=253 Identities=13% Similarity=0.071 Sum_probs=133.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...||+..|.--..-|. -..+++++..+++. .. .+ +....+..+.+..+++.+...- +....+++.+ +++
T Consensus 54 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~--~~-~~-~~~~~~~~~~~~~la~~l~~~~-p~~~~~~v~f--~~s 125 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGN-SAPRVVEAVREQVA--RF-TH-TCFMVTPYEGYVAVAEQLNRLT-PGDHEKRSAL--FNS 125 (443)
T ss_pred CCCEEEEcCcchhhhccCC-CCHHHHHHHHHHHH--hc-cC-ccccccCCHHHHHHHHHHHHhC-CCCCCCEEEE--eCC
Confidence 3556889877742112221 12334444444443 11 11 2222223455556666643221 1000247777 888
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCC-------------eEEEEEee----cCCCCCCCH-HH--
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGL-------------SVKSYRYY----DPATRGLNF-QG-- 209 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~-------------~~~~v~~~----~~~~~~~d~-~~-- 209 (350)
|++|...+..+.......++|+....+|.+.....- ..+. .+..+|+. +..+...+. +.
T Consensus 126 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 126 GAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 999998876554333344789999999987753322 1111 12222210 100000110 11
Q ss_pred -HHHHhhc--CCCCcEEEEecCCCCCCC--CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 210 -LLEDLGS--APAGAIVLLHACAHNPTG--VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 210 -l~~~l~~--~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
..+.+++ .+.+..++ +..|.+.+| ..++++.+++|.++|++||+++|+||++.+|...+ + .+....+ .-.
T Consensus 206 ~~~~~l~~~~~~~~iAav-i~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG--~-~fa~~~~-gv~ 280 (443)
T PRK06058 206 RAITVIEKQVGADNLAAV-IIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG--A-WFACEHE-GIV 280 (443)
T ss_pred HHHHHHHHhhCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh--h-hhHHHhc-CCC
Confidence 1121221 12233333 456787775 33568899999999999999999999999985332 1 1122111 111
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
..+++ ++|.++ .|+++|+++ +. +++.+.+.........+.+++++.++...|
T Consensus 281 PDiv~---~gK~l~-~G~Pi~av~--~~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (443)
T PRK06058 281 PDLIT---TAKGIA-GGLPLSAVT--GR-----AEIMDAPHPGGLGGTYGGNPVACAAALAAI 332 (443)
T ss_pred CCEEE---Eccccc-CCCccEEEE--Ec-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 23443 489999 999999977 65 455554443322233346666666666555
No 257
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.10 E-value=4.9e-09 Score=101.85 Aligned_cols=188 Identities=15% Similarity=0.173 Sum_probs=115.0
Q ss_pred CCCCCCC--CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH----HH
Q 018820 111 KEYLPIV--GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP----KV 184 (350)
Q Consensus 111 ~~Y~p~~--G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~ 184 (350)
+.|+-.. -..+|-+.++++. |. +..++ +++|+.|+.+ .+++++.+||+|+++.+.|.+.. ..
T Consensus 56 ~~Y~r~~~P~~~~lE~~la~le-g~-------~~av~--~sSG~aAi~~--al~all~~GD~Vl~~~~~yg~t~~~~~~~ 123 (384)
T PRK06434 56 YIYTRWGNPTVQAFEEKYAVLE-NA-------EHALS--FSSGMGAITS--AILSLIKKGKRILSISDLYGQTFYFFNKV 123 (384)
T ss_pred cceeCCCChhHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHH--HHHHHhCCCCEEEEecCccchHHHHHHHH
Confidence 3355442 2355666676664 32 34555 8899999998 45567889999999988776665 45
Q ss_pred HHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 185 FTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
+...|++++.++. ++ +++.++ . .+..+|+...|.|||+.+. ++++|.++|+++++ ++|.++.
T Consensus 124 ~~~~Gi~v~fvd~-~~~~~~~l~---------~--~~tklv~~e~~snpt~~v~---Di~~I~~la~~~~l--vVD~t~~ 186 (384)
T PRK06434 124 LKTLGIHVDYIDT-DRLNSLDFD---------P--SNYDLIYAESITNPTLKVP---DIKNVSSFCHENDV--IVDATFA 186 (384)
T ss_pred HHhcCcEEEEECC-CChhheeec---------C--CCeeEEEEEcCCCCCceee---cHHHHHHHHHHcCe--EEECCCC
Confidence 5678999999887 32 222211 1 1233788899999999874 57788888999984 4599864
Q ss_pred CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc-eeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHH
Q 018820 264 GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER-VGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R-vG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i 342 (350)
.-..+ .++. .+ --+++.|.+|.++-+|-= -|.++ +.+++..+++. ..........+.+.+++
T Consensus 187 s~~~~------~pl~----~g-aDivv~S~tK~i~G~~d~~gG~vv--~~~~~~~~~~~----~~~~~~G~~~~~~~A~l 249 (384)
T PRK06434 187 SPYNQ------NPLD----LG-ADVVIHSATKYISGHSDVVMGVAG--TNNKSIFNNLV----ERRKTLGSNPDPIQAYL 249 (384)
T ss_pred CcccC------Cchh----cC-CCEEEeecccccCCCCCceEEEEe--cCcHHHHHHHH----HHHHhcCCCCCHHHHHH
Confidence 32211 1221 11 236788899999755643 45444 55544333333 22222233445555555
Q ss_pred HH
Q 018820 343 VA 344 (350)
Q Consensus 343 ~~ 344 (350)
+.
T Consensus 250 ~~ 251 (384)
T PRK06434 250 AL 251 (384)
T ss_pred HH
Confidence 43
No 258
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.09 E-value=2.5e-09 Score=99.99 Aligned_cols=204 Identities=17% Similarity=0.119 Sum_probs=131.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY 172 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl 172 (350)
.+.+.+++.... .+.. .|+...-..+|.+.++++ +|. +..++ +++||.|..++ +...+.|++.|+
T Consensus 8 ~~~m~~a~~~a~--~gd~-~Yg~D~~~~~l~~~i~~l-~g~-------e~a~f--~~sGT~An~~a--l~~~~~~~~~vi 72 (290)
T PF01212_consen 8 TPAMLEAMAAAN--VGDD-AYGEDPTTARLEERIAEL-FGK-------EAALF--VPSGTMANQLA--LRAHLRPGESVI 72 (290)
T ss_dssp -HHEEHHHHHTT--SB-C-CTTSSHHHHHHHHHHHHH-HTS-------SEEEE--ESSHHHHHHHH--HHHHHHTTEEEE
T ss_pred CHHHHHHHHccc--cCCc-ccCCChhHHHHHHHHHHH-cCC-------CEEEE--eCCCChHHHHH--HHHHHhcCCcee
Confidence 444555554433 2333 588777788899999887 454 24455 88999999884 445568999999
Q ss_pred EcCCCCC---ChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCC-CCCCCHHHHHHH
Q 018820 173 IPQPTWG---NHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPT-GVDPTLQQWERI 245 (350)
Q Consensus 173 v~~P~y~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPT-G~~~s~~~~~~i 245 (350)
+..+++. ....+....|+++++++- ++ +..+|++.+++.+... ...+.+|.+.+|+|-. |.+++.+++++|
T Consensus 73 ~~~~aHi~~~E~ga~~~~~G~~~~~l~~-~~-~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai 150 (290)
T PF01212_consen 73 CADTAHIHFDETGAIEELSGAKLIPLPS-DD-DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAI 150 (290)
T ss_dssp EETTEHHHHSSTTHHHHHTTCEEEEEBE-CT-GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHH
T ss_pred ccccceeeeeccchhhHhcCcEEEECCC-cc-cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHH
Confidence 9988543 223334568999999987 32 2569999999998772 2456789999999985 889999999999
Q ss_pred HHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHH
Q 018820 246 RQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQ 323 (350)
Q Consensus 246 ~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~ 323 (350)
.++|++||+.+..|=+-..-.-. .-..+++.+. .+..++ .-|++|+++++ .|.++ +.+++.+++...+
T Consensus 151 ~~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~-~~~D~v-~~~~tK~~g~~---~Gavl--~~~~~~i~~~~~~ 218 (290)
T PF01212_consen 151 SELAREHGLPLHMDGARLANAAA---ALGVSLAEIA-AGADSV-SFGGTKNGGAP---GGAVL--AGNKEFIAKARRQ 218 (290)
T ss_dssp HHHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH-TTSSEE-EEETTSTT-SS---SEEEE--EESHHHHHHHHHH
T ss_pred HHHHHhCceEEEEehhhHHHhhh---cccccHHHHh-hhCCEE-EEEEEcccccc---cceEE--EechHHHHHHHHH
Confidence 99999999999999763211110 0002334443 233455 45799998754 47666 6676644443333
No 259
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.05 E-value=3e-08 Score=97.47 Aligned_cols=155 Identities=11% Similarity=0.078 Sum_probs=96.6
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCCC-CCCCHHHHHHH
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPAT-RGLNFQGLLED 213 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~~-~~~d~~~l~~~ 213 (350)
+++|++|...+..+........+|+...-+|.+.... +...|. .+..+|+.+... ..-+++.+++.
T Consensus 105 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 184 (412)
T TIGR02407 105 GPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKL 184 (412)
T ss_pred CCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHH
Confidence 5899999988765543333346788888888766433 222221 122333311000 00236667777
Q ss_pred hhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 214 LGSAP---AGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 214 l~~~~---~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
+.+.. ....++++-.-+++.|+ .++++.+++|.++|++||+++|+||++.+|.--+ + ......+ .-...++
T Consensus 185 ~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~-~~a~~~~-~v~PDi~- 259 (412)
T TIGR02407 185 LEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG--T-FFSFEPA-GIEPDIV- 259 (412)
T ss_pred HHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--h-hHHhccc-CCCCCEE-
Confidence 75432 23456667777888998 6799999999999999999999999998874321 1 0111111 1112333
Q ss_pred EeccccccCcc-CcceeEEEEeeC
Q 018820 290 AQSYAKNLGLY-GERVGALSIVCK 312 (350)
Q Consensus 290 ~~S~SK~~gl~-G~RvG~l~~v~~ 312 (350)
+|||.++ + |+|+||++ ++
T Consensus 260 --~~~K~lg-~~G~pigav~--~~ 278 (412)
T TIGR02407 260 --CLSKSIS-GYGLPLALTL--IK 278 (412)
T ss_pred --Eechhcc-CCccceeEEE--Ec
Confidence 5799998 7 99999988 65
No 260
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.05 E-value=9.1e-09 Score=98.43 Aligned_cols=172 Identities=13% Similarity=0.180 Sum_probs=125.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
.+.++ .++|..|+.. .++.++..|+.|+..+..|.....+++ ..|++...+.. -|++.+++.+++
T Consensus 93 ~~~l~--fsSGmaA~~~--al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-------~~~~~~~~~i~~ 161 (409)
T KOG0053|consen 93 AHALL--FSSGMAAITV--ALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-------DDLKKILKAIKE 161 (409)
T ss_pred ceEEE--ecccHHHHHH--HHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-------hhHHHHHHhhcc
Confidence 34666 8889988877 556667899999999999998888776 56777766654 357778888877
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
++. ++++-+|.||+..+.+. ++|+++|+++|+++|+|+.+.....-+ ++. + | -=|++.|.+|.
T Consensus 162 ~t~---~V~~ESPsNPll~v~DI---~~l~~la~~~g~~vvVDnTf~~p~~~~------pL~-l---G-ADIV~hSaTKy 224 (409)
T KOG0053|consen 162 NTK---AVFLESPSNPLLKVPDI---EKLARLAHKYGFLVVVDNTFGSPYNQD------PLP-L---G-ADIVVHSATKY 224 (409)
T ss_pred Cce---EEEEECCCCCccccccH---HHHHHHHhhCCCEEEEeCCcCcccccC------hhh-c---C-CCEEEEeeeee
Confidence 544 89999999999988865 556777779999999999988764321 111 1 1 12789999999
Q ss_pred cCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 297 LGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
+|-.+-=+|-++ +.+. .++.++++..+.....+++++...++.+
T Consensus 225 i~Ghsdvi~G~i--v~n~---~~~~~~l~~~~~~lg~~~~p~~~~ll~R 268 (409)
T KOG0053|consen 225 IGGHSDVIGGSV--VLNS---EELASRLKFLQEDLGWCEDPFDLFLLSR 268 (409)
T ss_pred ecCCcceeeeEE--ecCc---HHHHHHHHHHHHHhcCCCCHHHHHHHhc
Confidence 976666666555 3332 4666777777777777788877666543
No 261
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.05 E-value=3.5e-08 Score=97.32 Aligned_cols=169 Identities=11% Similarity=0.061 Sum_probs=101.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh----c-CC-CEEEEcCCCCCChHHHH-HHcCC------------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH----Y-HQ-RTIYIPQPTWGNHPKVF-TLAGL------------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~ 200 (350)
.+++.+ +++|++|...+..+.... . +| .+|+...-+|.+..... ...+- .+..+++...
T Consensus 102 ~~~v~f--~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (423)
T PRK05964 102 LDHVFF--SDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD 179 (423)
T ss_pred CCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc
Confidence 358888 999999998876554333 1 23 57888888887653322 21111 1222332110
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEecC-CCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLHAC-AHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
+....+++.+++.+...+.+..++++-. .++..|..+ +.+.+++|.++|++||+++|+||++.+|...+ . .....
T Consensus 180 d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G--~-~~a~~ 256 (423)
T PRK05964 180 GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG--T-LFACE 256 (423)
T ss_pred hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--c-hhHHH
Confidence 0001127777777765444343444432 377788766 89999999999999999999999998885432 1 11111
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHH
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
.+ .....+ -+++|.++..++++|+++ +. +++.+.+
T Consensus 257 ~~-~v~pDi---~~~~K~l~gG~~p~~av~--~~-----~~i~~~~ 291 (423)
T PRK05964 257 QA-GVSPDI---MCLSKGLTGGYLPLAATL--CT-----AEIFEAF 291 (423)
T ss_pred hc-CCCCCe---eeeehhhhcCcccceEEE--Ec-----HHHHHhh
Confidence 11 111223 467999984448999866 54 4455544
No 262
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.04 E-value=3.4e-08 Score=97.83 Aligned_cols=210 Identities=18% Similarity=0.180 Sum_probs=123.7
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC---CC--cHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI---VG--LAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~---~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
..||.+--.+.+..|..+..+.+.++....... ....+|.-. .| ...+++.++++. |. ++ .++ +
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g~r~~~le~~lA~l~-ga------e~-alv--v 143 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRGSRYSHVEGLLCELT-GA------ED-ALV--V 143 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhc-ccchhccccccccchHHHHHHHHHHHHh-CC------Cc-EEE--E
Confidence 356644323334444444445555555444311 112223211 12 367888888874 43 22 344 6
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh------HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH------PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~------~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
++++.|+.++. ..+.+||.|++++-.+..| ...++..|++++.++. +. ..+++.+++++.++++
T Consensus 144 ~sg~aAi~l~l---~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~-~~---~~~l~dle~aI~~~T~--- 213 (454)
T TIGR00474 144 NNNAAAVLLAL---NTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT-TN---RTHLKDYEDAITENTA--- 213 (454)
T ss_pred CCHHHHHHHHH---HHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC-CC---CCCHHHHHHhcCcCCE---
Confidence 77788887643 3467999999998664222 3456778999988865 22 3578899998876544
Q ss_pred EEEecCCCCCC--CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC----CCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 223 VLLHACAHNPT--GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA----SGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 223 ~l~~~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~----~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
+++..++.||+ |.. ....+++|+++|+++|+++++|.+..-+. ++ + ...+.+......+.. +++.|.+|.
T Consensus 214 lv~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~g-l-~~~p~~~~~~~~GaD-iv~fSg~K~ 289 (454)
T TIGR00474 214 LLLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYG-L-PDEPTVQEVIAAGVD-LVTFSGDKL 289 (454)
T ss_pred EEEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhcc-C-CCCcccccHhHcCCC-EEEecCccc
Confidence 67777889996 531 12246778999999999999997633221 11 0 001111122223323 778999998
Q ss_pred cCccCcceeEEEEeeC
Q 018820 297 LGLYGERVGALSIVCK 312 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~ 312 (350)
+|-+ ..|+++ +.
T Consensus 290 LgGp--~~G~i~--g~ 301 (454)
T TIGR00474 290 LGGP--QAGIIV--GK 301 (454)
T ss_pred cCCC--eEEEEE--EC
Confidence 8644 578766 55
No 263
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.02 E-value=1.9e-08 Score=98.45 Aligned_cols=188 Identities=13% Similarity=0.102 Sum_probs=123.4
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC-ChHHHHHHcCC
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG-NHPKVFTLAGL 190 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~~~~G~ 190 (350)
.|+......+|.+++++++ |. +.++. +++|+.|++++ +...+.+||.| +..+|. .........|+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l-G~-------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga 138 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY-GF-------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNGG 138 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH-CC-------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCCc
Confidence 4877777889999999985 54 35666 99999999984 33347799965 443333 33343677888
Q ss_pred eEEEEEe--------ecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 191 SVKSYRY--------YDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPT-GVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 191 ~~~~v~~--------~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
..+.+.. .++.++.+|++.+++.+++.. .+..++...+++|-. |..++.+++++|.++|++||+.+++|-
T Consensus 139 ~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 139 IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 6555531 135568899999999997642 222244445578988 789999999999999999999999998
Q ss_pred CCC-C---CC------CCCCCCchH-HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 261 AYQ-G---FA------SGSLDSDAQ-SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 261 aY~-~---~~------~~~~~~~~~-~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
+-. + |. |.+ +... -.+.+... --+++.||+|+++. +. -|+++ +.|++..+++.
T Consensus 219 Ara~gna~fI~~re~~y~~--~~i~ei~~e~~s~--aD~~t~S~~K~~~~-~~-GG~i~--t~D~eL~~~~r 282 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQD--KSIKEIVHEMFSY--ADGCTMSGKKDCLV-NI-GGFLA--MNDEELFDEAK 282 (460)
T ss_pred cchhcChhhhcccccccCC--CcHhHHhhhccCc--CcEEEEeCCCCCCC-CC-ceEEE--ECCHHHHHHHH
Confidence 754 2 22 211 1111 11222222 23556779999874 33 37766 77765444443
No 264
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.02 E-value=8.7e-08 Score=92.55 Aligned_cols=222 Identities=15% Similarity=0.081 Sum_probs=133.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CC---CCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RS---RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~---~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
+...+||+..+|-..... ..+++++.+.+.+- .+ .-.-++...=..+|-+.+|+|+ |. +.-++
T Consensus 38 ~~~~~nf~SNdYLGLa~~---~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~------e~al~--- 104 (388)
T COG0156 38 GRKVLNFCSNDYLGLASH---PELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GA------EAALL--- 104 (388)
T ss_pred CceeEeeeccCcccccCC---HHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CcEEE---
Confidence 467999999988543333 33334444444310 11 1111322333567888888884 54 33344
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-C--CcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-A--GAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~--~~~~l 224 (350)
..+|-.|..- .+-++..++|.|+.-.-.......-++..+++++.+.- .|++.|++.+++.. . +.++|
T Consensus 105 f~SGy~AN~~--~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~I 175 (388)
T COG0156 105 FSSGFVANLG--LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLI 175 (388)
T ss_pred EcccchhHHH--HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEE
Confidence 3444444433 34456778898888776666666667788888887754 47888999887621 1 23455
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-hcCCcEEEEeccccccCccCcc
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV-ADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~gl~G~R 303 (350)
+.-.---=.|.+ ..+++|++++++|+.++++||++.-=.+|+--.. ....+- ...+..|.++||||.||..|
T Consensus 176 vtegVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG--~~e~~g~~~~~vdi~~gTlsKAlGs~G-- 248 (388)
T COG0156 176 VTEGVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRG--LAEHFGLEPEEVDIIVGTLGKALGSSG-- 248 (388)
T ss_pred EEeccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCcc--HHHHhCCCCccceEEEEEchhhhcccC--
Confidence 544333334444 4567889999999999999999998777631011 122221 12335899999999998555
Q ss_pred eeEEEEeeCChhHHHHHHHHHHHhhcc
Q 018820 304 VGALSIVCKTADVAGRVESQVKLVIRP 330 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~~~~l~~~~~~ 330 (350)
||+. ++ ..+++.+....++
T Consensus 249 -g~v~--g~-----~~~~d~L~~~ar~ 267 (388)
T COG0156 249 -GYIA--GS-----AALIDYLRNRARP 267 (388)
T ss_pred -ceee--Cc-----HHHHHHHHHhCCc
Confidence 6555 54 4555555554433
No 265
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.01 E-value=1.3e-09 Score=105.83 Aligned_cols=195 Identities=14% Similarity=0.090 Sum_probs=121.5
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
+.|...=-|..+..+||.+ +-..+ ++|+|.++.. .+++.+.+||+|+++.-+.-.....+...|++++++
T Consensus 64 p~G~I~eAe~~aA~~fGAd------~t~fl--vnGsT~g~~a--~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi 133 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD------KTFFL--VNGSTSGNQA--MIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYI 133 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES------EEEEE--SSHHHHHHHH--HHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEE
T ss_pred CccHHHHHHHHHHHhcCCC------eEEEE--ecCchHHHHH--HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEe
Confidence 4554333334444457863 45666 9999999988 667889999999999988666666777899999998
Q ss_pred EeecCC-C--CCCCH-----HHHHHHhhcCCCCcE--EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 196 RYYDPA-T--RGLNF-----QGLLEDLGSAPAGAI--VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 196 ~~~~~~-~--~~~d~-----~~l~~~l~~~~~~~~--~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
+..+++ + .+++. +.+++.+++.+..+. ++++.+| +=-|++++ +++|+++|.++++.|++||||...
T Consensus 134 ~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah 209 (417)
T PF01276_consen 134 PPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYD---IKEIAEICHKHGIPLLVDEAHGAH 209 (417)
T ss_dssp EEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-TT
T ss_pred cCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEEC---HHHHHHHhcccCCEEEEEcccccc
Confidence 764322 1 34555 899999988765443 3444332 23477775 567789999999999999999874
Q ss_pred C-CCCCCCchHHHHHHhh--cCCcEEEEeccccccCccCcceeEEEEeeCCh-hHHHHHHHHHHHhh
Q 018820 266 A-SGSLDSDAQSVRMFVA--DGGECFIAQSYAKNLGLYGERVGALSIVCKTA-DVAGRVESQVKLVI 328 (350)
Q Consensus 266 ~-~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~-~~~~~~~~~l~~~~ 328 (350)
. +.++.++ ....-++ ....+++++|.-|.+ +++.-+.++.+-.+. -..+++.+.+..++
T Consensus 210 ~~F~~lp~~--a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~ 272 (417)
T PF01276_consen 210 FGFHPLPRS--ALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQ 272 (417)
T ss_dssp GGCSGGGTT--CSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS
T ss_pred ccCCCCccc--hhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHc
Confidence 3 2211111 1101111 123689999999985 789888776665554 23455665554444
No 266
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.00 E-value=5e-08 Score=94.36 Aligned_cols=165 Identities=24% Similarity=0.282 Sum_probs=114.4
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH-HhcCCCEEEEcCCCCCChHH----HHHHcCCeEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA-RHYHQRTIYIPQPTWGNHPK----VFTLAGLSVK 193 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~-~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~ 193 (350)
..+.|+.+++++ |.+. +++|++ +.|++.++..+..-+. .+.+||+|++.+-.|+.... +.+..|+++.
T Consensus 45 ~~~~r~~la~~l-g~~~----~~~v~~--~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 117 (371)
T PF00266_consen 45 LEEAREALAKLL-GAPP----DEEVVF--TSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVR 117 (371)
T ss_dssp HHHHHHHHHHHH-TSST----TEEEEE--ESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHhc-CCcc----cccccc--ccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 356778888875 4431 268888 9999999987432221 16789999998877765552 3346799999
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. +.+ ..+|++.+++.+...++ +++++..+|-||+..+. ++|.++|++++++++.|-+..--.. ++
T Consensus 118 ~i~~-~~~-~~~~~~~~~~~l~~~~~---lv~~~~~~~~tG~~~pi---~~I~~~~~~~~~~~~vD~~~~~g~~-~i--- 185 (371)
T PF00266_consen 118 VIPA-DPG-GSLDLEDLEEALNPDTR---LVSISHVENSTGVRNPI---EEIAKLAHEYGALLVVDAAQSAGCV-PI--- 185 (371)
T ss_dssp EEEE-GTT-SSCSHHHHHHHHHTTES---EEEEESBETTTTBBSSH---HHHHHHHHHTTSEEEEE-TTTTTTS-S----
T ss_pred cccc-ccc-chhhhhhhhhhhccccc---eEEeecccccccEEeee---ceehhhhhccCCceeEechhccccc-cc---
Confidence 9988 543 46899999999976555 77777788999998874 5778999999999999987653221 11
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.+. .. .-=+++.|.-| |+ .+-.+|++. ..
T Consensus 186 --d~~---~~-~~D~~~~s~~K-l~-gp~G~g~l~--v~ 214 (371)
T PF00266_consen 186 --DLD---EL-GADFLVFSSHK-LG-GPPGLGFLY--VR 214 (371)
T ss_dssp ---TT---TT-TESEEEEESTS-TT-SSSTEEEEE--EE
T ss_pred --ccc---cc-ccceeeecccc-cC-CCCchhhhe--eh
Confidence 111 11 11267888999 54 345578877 55
No 267
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.00 E-value=1.2e-09 Score=92.31 Aligned_cols=64 Identities=16% Similarity=0.263 Sum_probs=52.8
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCC--CCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC
Q 018820 113 YLPIVGLAEFNKLSAKLILGADS--PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN 180 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~--~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~ 180 (350)
|.+..|.++||+++|+|+..... ..+.+++|++ |+|+++++.+ .+.+++.+||.|++++|+|+.
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~--l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEI--IMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHH--HHHHHcCCCCEEEEeCCCCCC
Confidence 98999999999999999633211 2245889999 9999999988 445668999999999999973
No 268
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=1.2e-07 Score=94.03 Aligned_cols=188 Identities=15% Similarity=0.141 Sum_probs=107.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCC-------------eEEEEEeecCCC--CC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGL-------------SVKSYRYYDPAT--RG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~~~--~~ 204 (350)
++|.+ +++|++|...+..+........+|+...-+|.+... .+...+. .++.+|+.+... +.
T Consensus 104 ~~v~f--~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 181 (445)
T PRK08593 104 KRVTF--GLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYE 181 (445)
T ss_pred CEEEE--CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 57888 999999998876553333333567777777766532 2222221 122333311100 00
Q ss_pred -CC-------HHHHHHHhhcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 205 -LN-------FQGLLEDLGSA--PAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 205 -~d-------~~~l~~~l~~~--~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.+ ++.+++.+... ....+++++-..+...|.. ++++.+++|.++|++||+++|+||++.+|...+ .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~ 258 (445)
T PRK08593 182 EPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---K 258 (445)
T ss_pred CCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---h
Confidence 11 13344434321 2345566666667777876 789999999999999999999999999885432 1
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh-hcccccCCChhHHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV-IRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~i~~~~ 346 (350)
.+....+ .-... +-+|+|.++ .|+++|+++ +. +++.+.+... ...+++ .++++..++...
T Consensus 259 ~~a~~~~-gv~pD---i~t~gK~l~-~G~p~gav~--~~-----~~i~~~~~~~~~~~T~~-~~pl~~aaa~a~ 319 (445)
T PRK08593 259 WSSISHF-NITPD---LMSFGKSLA-GGMPMSAIV--GR-----KEIMESLEAPAHLFTTG-ANPVSCAAALAT 319 (445)
T ss_pred HHHHHhc-CCCCC---Eeeeccccc-CCcccEEEE--Ec-----HHHHhhhccCCCCCCCC-CCHHHHHHHHHH
Confidence 1122222 11123 337899998 899999977 66 4555544321 222333 444444444333
No 269
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.99 E-value=9.7e-08 Score=94.29 Aligned_cols=161 Identities=13% Similarity=0.120 Sum_probs=96.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcC---------C---eEEEEEeecCCCC-CCCH
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAG---------L---SVKSYRYYDPATR-GLNF 207 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G---------~---~~~~v~~~~~~~~-~~d~ 207 (350)
++.+ .+++|++|...+..+........+|+...-+|.+.... +...| . .+..+|+.+.... .-|+
T Consensus 104 ~~~f-~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 104 KVQF-TGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred eEEE-eCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 4543 15899999988766543333336788777778765432 22111 1 2333443110000 1267
Q ss_pred HHHHHHhhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc
Q 018820 208 QGLLEDLGSAP---AGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD 283 (350)
Q Consensus 208 ~~l~~~l~~~~---~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~ 283 (350)
+.+++.+++.. +..+++++-.-..-.|+ .++++.+++|.++|++||+++|+||++.+|...+ .......+ .-
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~~-~v 258 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFERA-GI 258 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhhc-CC
Confidence 77888776432 22334444433444565 6789999999999999999999999998874322 11122211 11
Q ss_pred CCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
...+ -+|||.++-.|+++|+++ ++
T Consensus 259 ~PDi---~t~~K~l~~~G~pigav~--~~ 282 (425)
T PRK09264 259 TPDI---VTLSKSISGYGLPMALVL--IK 282 (425)
T ss_pred CCCE---EEeccccCCCccceEEEE--Ec
Confidence 1233 366999995599999988 66
No 270
>PRK06541 hypothetical protein; Provisional
Probab=98.95 E-value=3.1e-07 Score=91.49 Aligned_cols=160 Identities=16% Similarity=0.171 Sum_probs=96.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh---c--C-CCEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH---Y--H-QRTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~---~--~-gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~ 200 (350)
-+++.+ +++|++|...+..+.... . + ..+|+...-+|.+.... +...|. .+..+|..+.
T Consensus 112 ~~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~ 189 (460)
T PRK06541 112 LNRVFF--TTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNF 189 (460)
T ss_pred cCEEEE--cCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcc
Confidence 368888 999999998876553322 1 1 35677777777655432 211111 1222222000
Q ss_pred CC---CCCC--------HHHHHHHhhcC-CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCC-C
Q 018820 201 AT---RGLN--------FQGLLEDLGSA-PAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGF-A 266 (350)
Q Consensus 201 ~~---~~~d--------~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~-~ 266 (350)
.. ++-+ ++.+++.+... ++..+++++-.-++++|.+++ ++-+++|.++|+++|+++|+||++-+| .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR 269 (460)
T PRK06541 190 YRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR 269 (460)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 00 1112 25666666532 233344444333899998865 888999999999999999999999888 3
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
.+. ......+ .-...++ +|||.++ .|+ ++|+++ +.
T Consensus 270 ~G~----~~a~~~~-gv~PDiv---t~gK~l~-~G~~pigav~--~~ 305 (460)
T PRK06541 270 LGE----MFGCERF-GYVPDII---TCAKGIT-SGYSPLGAMI--AS 305 (460)
T ss_pred Cch----hhhhhhc-CCCCCEE---Eeccccc-CCccceeEEE--Ec
Confidence 331 1112111 1112344 4899999 898 999987 76
No 271
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.93 E-value=9.9e-08 Score=89.60 Aligned_cols=178 Identities=17% Similarity=0.305 Sum_probs=106.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE-EcCCCCCChHHHH----------H
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY-IPQPTWGNHPKVF----------T 186 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl-v~~P~y~~~~~~~----------~ 186 (350)
|...|-+..|+ +||. ++-++=.|..+||+|+.+ .|+..+.|||+++ +...-|.....++ +
T Consensus 55 GRd~le~iyA~-vfga------E~ALVRpq~vSGTHAi~~--~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~ 125 (403)
T PF06838_consen 55 GRDKLERIYAD-VFGA------EDALVRPQFVSGTHAIAL--ALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK 125 (403)
T ss_dssp HHHHHHHHHHH-HCT-------SEEEEETTS-SHHHHHHH--HHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG
T ss_pred cHHHHHHHHHH-HhCc------hhhhhcccccchHHHHHH--HHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH
Confidence 54555444544 4565 333333567789999998 6778899999977 5666788888876 4
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh--cCcEEEEccCCCC
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS--KGLLPFFDSAYQG 264 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~DeaY~~ 264 (350)
..|++...+++ .++ ..+|++.++++++..+ +++++.=+..--+=-.++.++++++++++|+ .++++++|+||.+
T Consensus 126 e~Gi~Y~~v~L-~~d-g~~D~~~i~~~~~~~t--k~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGE 201 (403)
T PF06838_consen 126 EFGIKYREVPL-TED-GTIDWEAIKKALKPNT--KMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGE 201 (403)
T ss_dssp GGT-EEEE--B--TT-SSB-HHHHHHHHHTTE--EEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTT
T ss_pred HhCceeEEEee-cCC-CCcCHHHHHHhhccCc--eEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcce
Confidence 67889999999 443 4799999999998543 3455544433333345788999999999986 6899999999999
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc--eeEEEEeeCChhHHHHHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER--VGALSIVCKTADVAGRVES 322 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R--vG~l~~v~~~~~~~~~~~~ 322 (350)
|+... .+. .. |. =+..+|+=||.| .|+= -||++ .. ++..++.-.
T Consensus 202 FvE~~-----EP~-~v---GA-Dl~aGSLIKNpG-GgiAptGGYIa--Gr-~~lVe~~a~ 247 (403)
T PF06838_consen 202 FVETQ-----EPT-EV---GA-DLMAGSLIKNPG-GGIAPTGGYIA--GR-KDLVERAAY 247 (403)
T ss_dssp TTSSS------GG-GG---T--SEEEEETTSGGG-TTT-SS-EEEE--ES-HHHHHHHHH
T ss_pred ecccc-----Ccc-cc---ch-hheeccceeCCC-CCccCcCCEEe--ch-HHHHHHHHh
Confidence 99541 121 22 22 266999999998 6653 35655 44 444444433
No 272
>PLN03032 serine decarboxylase; Provisional
Probab=98.93 E-value=2.9e-08 Score=96.01 Aligned_cols=159 Identities=16% Similarity=0.139 Sum_probs=108.4
Q ss_pred CCcE--EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 140 ENRV--TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 140 ~~~v--~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
++++ ++ |.|||+|..++........++..|+++.-........++..|.+++.+|. +++ +.+|++.|++.+++.
T Consensus 83 ~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~-d~~-g~id~~~L~~~i~~~ 158 (374)
T PLN03032 83 KDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT-LPS-GEIDYDDLERALAKN 158 (374)
T ss_pred CccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee-CCC-CcCcHHHHHHHHHHc
Confidence 4555 56 99999999775332221235567888877777777888889999999998 654 579999999999875
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC-----cEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 218 PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG-----LLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~-----~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
..++++++.+..+|+||.+-+ +++|+++|+++| +|+.+|-+|.++... ..+..+.. .+. .+.. -+.-|
T Consensus 159 ~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~~~~~~~-~~~-~~vD-Sis~s 231 (374)
T PLN03032 159 RDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMP-FVSRAPEV-TFR-KPIG-SVSVS 231 (374)
T ss_pred CCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-ccCCCccc-CCC-cCCc-EEEEC
Confidence 445667778889999999865 456788888886 589999999775321 00110111 111 1112 23567
Q ss_pred cccccCccCcceeEEEEeeC
Q 018820 293 YAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 293 ~SK~~gl~G~RvG~l~~v~~ 312 (350)
..|..| .-.-+|.++ ..
T Consensus 232 ~HK~~g-~P~g~G~ll--~r 248 (374)
T PLN03032 232 GHKFLG-CPMPCGVAL--TR 248 (374)
T ss_pred cccccC-CCcCeEEEE--EE
Confidence 889665 567888877 55
No 273
>PRK02769 histidine decarboxylase; Provisional
Probab=98.91 E-value=6.8e-08 Score=93.84 Aligned_cols=153 Identities=17% Similarity=0.221 Sum_probs=109.6
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
|.|||++...+........+++.|++++-.+......++..|++.+.++. ++ ++.+|++.+++.+++...+.++++.+
T Consensus 90 TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~-~~-~g~id~~~L~~~i~~~~~~t~lvv~t 167 (380)
T PRK02769 90 TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS-LP-NGEIDYDDLISKIKENKNQPPIIFAN 167 (380)
T ss_pred ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc-CC-CCcCcHHHHHHHHHhCCCCcEEEEEE
Confidence 99999997654322122357889999988888888888999999988988 54 45699999999998764456688889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcC---cEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKG---LLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~---~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
.++|+||.+-+. ++|+++|+++| +++.+|-+|..+...-. +....+ .+.. +. -.+.-|.-|.++ .-..+
T Consensus 168 ~gtt~tG~idpi---~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~~~~~~-d~~~-~v-Dsis~s~HK~~~-~P~g~ 239 (380)
T PRK02769 168 IGTTMTGAIDNI---KEIQEILKKIGIDDYYIHADAALSGMILPFV-NNPPPF-SFAD-GI-DSIAISGHKFIG-SPMPC 239 (380)
T ss_pred eCCCCCcccCCH---HHHHHHHHHhCCCceEEEEEecccceeeccc-CccccC-CccC-CC-CEEEECCcccCC-CCCCc
Confidence 999999999885 55578888998 69999999988654211 110111 1111 11 234567789665 56788
Q ss_pred eEEEEeeC
Q 018820 305 GALSIVCK 312 (350)
Q Consensus 305 G~l~~v~~ 312 (350)
|.++ ..
T Consensus 240 G~l~--~r 245 (380)
T PRK02769 240 GIVL--AK 245 (380)
T ss_pred EEEE--Ee
Confidence 8877 55
No 274
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.91 E-value=2.3e-07 Score=90.79 Aligned_cols=216 Identities=14% Similarity=0.093 Sum_probs=123.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+||..|.-...-|.- .+.++++..+++. .. .+.+. ....+....+++++... .. .+++.+ +++
T Consensus 34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~--~~-~~~~~--~~~~~~~~~la~~l~~~-~~---~~~v~f--~~S 101 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAE--KL-INPSP--AFYNEPMAKLAGLLTQH-SC---FDKVFF--ANS 101 (395)
T ss_pred CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHH--hc-ccccc--cccCHHHHHHHHHHhhc-cC---CCEEEE--eCC
Confidence 35578999876432233322 2333433334433 11 11111 12345677788886433 12 467888 999
Q ss_pred chhHHHHHHHHHHHhc----CC-CEEEEcCCCCCChH-HHHHHcCCeEEEEEeecC--CC----CCCCHHHHHHHhhcCC
Q 018820 151 GTGSLRVGAEFLARHY----HQ-RTIYIPQPTWGNHP-KVFTLAGLSVKSYRYYDP--AT----RGLNFQGLLEDLGSAP 218 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~----~g-d~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~~~~--~~----~~~d~~~l~~~l~~~~ 218 (350)
|++|...+..+..... +| ..|+..+.+|.... ..+...|.......+ .+ .+ .-.|++.+++.+..
T Consensus 102 GseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~l~~-- 178 (395)
T PRK03715 102 GAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIF-APQVPGFPKAELNDIASVEKLITD-- 178 (395)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCC-CCCCCCceeeCCchHHHHHHHcCC--
Confidence 9999988655543221 23 56888888887653 333333322111111 00 00 12468888887753
Q ss_pred CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 219 AGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
+.+++++...++..|.. ++++.+++|.++|++||+++|+||++.+|...+ + -+....+.-. .. +-+|+|.+
T Consensus 179 -~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG--~-~~a~~~~gv~-PD---i~t~gK~l 250 (395)
T PRK03715 179 -KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG--T-LFAYELSGIE-PD---IMTLGKGI 250 (395)
T ss_pred -CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc--c-hhhHhhcCCC-Cc---eeeehhhh
Confidence 23355555445555655 479999999999999999999999999874322 1 1111222111 22 34779999
Q ss_pred CccCcceeEEEEeeC
Q 018820 298 GLYGERVGALSIVCK 312 (350)
Q Consensus 298 gl~G~RvG~l~~v~~ 312 (350)
| .|+-+|.++ +.
T Consensus 251 g-~G~p~~av~--~~ 262 (395)
T PRK03715 251 G-GGVPLAALL--AK 262 (395)
T ss_pred h-CCcceEEEE--Ec
Confidence 8 789999876 55
No 275
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.89 E-value=6.5e-08 Score=94.85 Aligned_cols=143 Identities=20% Similarity=0.139 Sum_probs=97.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCC---CEEEEcCCCCCChHH----HHHHcCCeE----EEEEeecCCCCCCCHH
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQ---RTIYIPQPTWGNHPK----VFTLAGLSV----KSYRYYDPATRGLNFQ 208 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~~----~~v~~~~~~~~~~d~~ 208 (350)
+++|++ |.|+|+++++++ ..++.++ +.|++.+..|+.-.. .++..|+++ +.++. + +++.+|++
T Consensus 86 ~~~v~~--~~~~t~~l~~~~--~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~g~~~~~ 159 (406)
T TIGR01814 86 EDEVVV--MNTLTINLHLLL--ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP-R-EEETLRLE 159 (406)
T ss_pred CCcEEE--eCCchHHHHHHH--HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc-C-CCCccCHH
Confidence 789999 999999998843 3334443 368888889986332 345678887 34444 2 23567899
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.++...++..+++++.++|.||...+ +++|.++|+++|+++++|.+-. +..-++ + + ... .--+
T Consensus 160 ~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~-~G~~~i--d---~---~~~-gvD~ 226 (406)
T TIGR01814 160 DILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA-VGNVPL--D---L---HDW-GVDF 226 (406)
T ss_pred HHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc-cCCccc--c---c---ccC-CCCE
Confidence 998888644344558888999999999997 5677889999999999998643 321111 1 1 111 1246
Q ss_pred EEeccccccC-ccC
Q 018820 289 IAQSYAKNLG-LYG 301 (350)
Q Consensus 289 ~~~S~SK~~g-l~G 301 (350)
++.|..|.++ -+|
T Consensus 227 ~~~s~hK~l~g~pG 240 (406)
T TIGR01814 227 ACWCTYKYLNAGPG 240 (406)
T ss_pred EEEcCccccCCCCC
Confidence 7788999873 345
No 276
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=98.88 E-value=1.2e-07 Score=93.39 Aligned_cols=218 Identities=16% Similarity=0.094 Sum_probs=119.5
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHH-hhcCCCCCCCCC-CCC---cHHHHH----HHHHH
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQL-VNDRSRVKEYLP-IVG---LAEFNK----LSAKL 129 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l-~~~~~~~~~Y~p-~~G---~~~lr~----aia~~ 129 (350)
.|+.+.++-.+ ...+.+||-..++.. .|.++++.... ....+....+.. ..| ..+|-+ .++++
T Consensus 15 ~~~~~~~~~~~-~~~~~~~l~~sen~~-------~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l 86 (416)
T PRK13034 15 EVFAAINKELE-RQQDHLELIASENFT-------SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQL 86 (416)
T ss_pred HHHHHHHHHHH-HHhcCeeecccccCC-------CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHH
Confidence 46666554322 224678888776632 45555554443 211111111111 122 344444 55555
Q ss_pred HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHH--HcCCeE--EEEEeecCCCCC
Q 018820 130 ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFT--LAGLSV--KSYRYYDPATRG 204 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~--~~G~~~--~~v~~~~~~~~~ 204 (350)
+|. + ...+ .+++|+.|+.. .+.+++.+||+|+++..+|..+.. -++ ..+... +.++. ++.++.
T Consensus 87 -~g~------~-~alv-~~~SG~~A~~~--~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~ 154 (416)
T PRK13034 87 -FGC------D-YANV-QPHSGSQANGA--VYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLTGL 154 (416)
T ss_pred -hCC------C-ceEE-ecCCcHHHHHH--HHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccccCC
Confidence 453 2 3322 26888999987 456678899999999988865311 111 011111 23333 444567
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.++... ..+|++..+.+ |... ++.+|.++|+++|+++++|++..--..+.. . ....+ .
T Consensus 155 ~d~~~le~~l~~~~--~klVi~~~~~~--g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g-~---~~~~~---~ 220 (416)
T PRK13034 155 IDYDEVEELAKEHK--PKLIIAGFSAY--PREL---DFARFREIADEVGALLMVDMAHIAGLVAAG-E---HPNPF---P 220 (416)
T ss_pred cCHHHHHHHHhhcC--CeEEEECCCcc--cccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC-C---CCCCC---C
Confidence 99999998885422 23666644443 4333 567778889999999999998654322210 0 00011 1
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
.--+++.|++|.++.+. -|+++ +.++
T Consensus 221 ~~Di~~~s~~K~l~g~~--GG~v~--~~~~ 246 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPR--GGMIL--TNDE 246 (416)
T ss_pred CceEEEEeCcccCCCCC--CeEEE--ECcH
Confidence 23478899999984222 36555 5543
No 277
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.84 E-value=8.9e-07 Score=87.82 Aligned_cols=189 Identities=17% Similarity=0.170 Sum_probs=105.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC-------------eEEEEEeecCCC--CC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL-------------SVKSYRYYDPAT--RG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~-------------~~~~v~~~~~~~--~~ 204 (350)
++|.+ +++|++|...+..+.......++|+...-+|.+.... +...|. .+..+++.+... +.
T Consensus 116 ~~v~f--~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (441)
T PRK05769 116 KKVFF--TNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWG 193 (441)
T ss_pred CEEEE--CCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcccccccc
Confidence 68888 9999999988765543333346788777788766532 222221 122232200000 00
Q ss_pred -CC--------HHHHHHHh-hc--CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 205 -LN--------FQGLLEDL-GS--APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 205 -~d--------~~~l~~~l-~~--~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
-| ++.+++.+ +. .+....++++-.-+.-.|. .++++.|++|.++|++||+++|.||++.+|...+
T Consensus 194 ~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G-- 271 (441)
T PRK05769 194 IENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG-- 271 (441)
T ss_pred CCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--
Confidence 01 23344422 21 1233444444333333455 4568889999999999999999999999874332
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+ ......+ .....++ +|||.++ .|+++|+++ +. +++...+...+..++++ +++++.++...|
T Consensus 272 ~-~~a~~~~-gv~pDiv---t~~K~l~-~G~p~gav~--~~-----~~i~~~~~~~~~~T~~g-~p~~~aaa~a~L 333 (441)
T PRK05769 272 K-MFAIEHF-GVEPDII---TLAKAIA-GGLPLGAVI--GR-----AELMFLPPGSHANTFGG-NPVAAAAALATL 333 (441)
T ss_pred c-eehhhcc-CCCCCEE---EEccccc-CCcccEEEE--Ee-----hhhhhcCCCCCCCCCCc-CHHHHHHHHHHH
Confidence 1 1111112 1112344 4899999 899999876 65 34443332234445543 555555555544
No 278
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.80 E-value=8.6e-08 Score=89.87 Aligned_cols=159 Identities=15% Similarity=0.167 Sum_probs=118.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~ 194 (350)
...|-+.+|.+= ..+..+.+.+|+.|+.. .++.+..+||.|+-..--|.+-...| +..|+++..
T Consensus 64 ~~vlE~RiAaLE----------GG~aa~a~aSG~AA~~~--ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~f 131 (426)
T COG2873 64 TDVLEERIAALE----------GGVAALAVASGQAAITY--AILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRF 131 (426)
T ss_pred HHHHHHHHHHhh----------cchhhhhhccchHHHHH--HHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEE
Confidence 345666666552 22333338889999988 56777899999999888887766554 578999888
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+.- .|++.++++++++++ +++.-.-.||-+.+++ +++|+++|+++++.+|+|+.+..-
T Consensus 132 vd~-------~d~~~~~~aI~~nTk---avf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp--------- 189 (426)
T COG2873 132 VDP-------DDPENFEAAIDENTK---AVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP--------- 189 (426)
T ss_pred eCC-------CCHHHHHHHhCcccc---eEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc---------
Confidence 743 478999999998887 8888889999998886 567799999999999999976432
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
+-.+.+ +.|. =|+++|.||.+|-.|--+|-+++-+++
T Consensus 190 yl~rP~-~hGA-DIVvHS~TK~igGhGt~iGG~iVD~G~ 226 (426)
T COG2873 190 YLCRPI-EHGA-DIVVHSATKYIGGHGTAIGGVIVDGGK 226 (426)
T ss_pred eecchh-hcCC-CEEEEeecccccCCccccceEEEeCCc
Confidence 112222 2222 366899999999899999988855543
No 279
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.80 E-value=3.9e-07 Score=90.37 Aligned_cols=239 Identities=19% Similarity=0.168 Sum_probs=136.1
Q ss_pred ccccchH-hhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC----CCCC-CCCCCCcHHHHHHHH---HH
Q 018820 59 PILGVTV-AYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS----RVKE-YLPIVGLAEFNKLSA---KL 129 (350)
Q Consensus 59 ~i~~~~~-~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~----~~~~-Y~p~~G~~~lr~aia---~~ 129 (350)
.|+.+.+ +.++ ..+.|+|-..++.. .+.+++++.....+.. ...+ |.......++-.... +.
T Consensus 36 ~~~~~~~~e~~r--q~~~l~LiasEN~~-------s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~ 106 (493)
T PRK13580 36 RIAEAIRQELAD--QRSSLKLIASENYS-------SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKE 106 (493)
T ss_pred HHHHHHHHHHHH--HhcCceEecccccC-------CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHH
Confidence 3555543 3332 25678998887732 5667776655442211 0112 322333333333332 33
Q ss_pred HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC-------------------------------CCEEEEcCCCC
Q 018820 130 ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH-------------------------------QRTIYIPQPTW 178 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~-------------------------------gd~Vlv~~P~y 178 (350)
+||.+. +-||..+|+.|... .+.+++.| ||+|+..++.-
T Consensus 107 lf~a~~--------anvqp~Sg~~An~~--v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~ 176 (493)
T PRK13580 107 LFGAEH--------AYVQPHSGADANLV--AFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDS 176 (493)
T ss_pred HhCCCc--------ccccCCCcHHHHHH--HHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCC
Confidence 676532 23468888888876 45666765 79999887777
Q ss_pred CChHHH---HHHcC--CeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 018820 179 GNHPKV---FTLAG--LSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 179 ~~~~~~---~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~ 253 (350)
+.|... ....| .+.+.|++ ++++..+|.+.+++.++..++ .++++...|=.+ .. .+++|.++|+++|
T Consensus 177 GGHlthg~~~n~~~~~~~~~~y~v-d~~~g~iD~d~l~~~~~~~~p---lvii~g~S~~~~-~~---dl~~i~eia~~~g 248 (493)
T PRK13580 177 GGHLTHGFRPNISGKMFHQRSYGV-DPDTGLLDYDEIAALAREFKP---LILVAGYSAYPR-RV---NFAKLREIADEVG 248 (493)
T ss_pred CCeeecCcccchhhheeeeEeccc-CcccCccCHHHHHHHHhhcCC---EEEEeCccccCC-Cc---CHHHHHHHHHHcC
Confidence 666332 11222 56677777 666678999999999987654 333333444433 44 4677788899999
Q ss_pred cEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccc
Q 018820 254 LLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMY 332 (350)
Q Consensus 254 ~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~ 332 (350)
.++++|++..- +.-++. .. ..+.....-=|++.|++|++ .|-|.|++. +. +.+++.+......++
T Consensus 249 A~L~VD~AH~~Gligg~~----~~-~~~~~~~~~D~vtgT~hKaL--~GP~GG~I~--~~-----~~l~~~L~~a~P~i~ 314 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKV----FT-GDEDPVPHADIVTTTTHKTL--RGPRGGLVL--AK-----KEYADAVDKGCPLVL 314 (493)
T ss_pred CEEEEECchhhceecccc----ch-hhcCCCCCCcEEEeCChhhc--cCCCeEEEE--ec-----HHHHHHHhhCCCccc
Confidence 99999998764 322221 00 00000011237789999987 345568766 65 445555544333445
Q ss_pred cCCChh
Q 018820 333 SNPPIH 338 (350)
Q Consensus 333 ~~~~~~ 338 (350)
+++..+
T Consensus 315 gg~l~p 320 (493)
T PRK13580 315 GGPLPH 320 (493)
T ss_pred CCCccH
Confidence 544443
No 280
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.77 E-value=1.7e-06 Score=85.73 Aligned_cols=213 Identities=16% Similarity=0.172 Sum_probs=117.1
Q ss_pred CCCCeEEeecc--cccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEec
Q 018820 71 PSPVKLNLGVG--AYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQC 148 (350)
Q Consensus 71 ~~~~~i~l~~G--~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t 148 (350)
.+...+|+..| ...--.+. +.++++..+++..- .....|.. .+.+..+|+.+... .+ -..+++.+ +
T Consensus 73 dG~~ylD~~~g~~~~~lGh~h---p~v~~Av~~ql~~l-~~~~~~~~----~~~~~~lAe~L~~~-~p-~~~~~v~f--~ 140 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRN---PNVIAAVENQLAKQ-PLHSQELL----DPLRALLAKTLAAL-TP-GKLKYSFF--C 140 (442)
T ss_pred CCCEEEECCccHHhhhcCCCC---HHHHHHHHHHHHhC-CCcccccC----CHHHHHHHHHHHHh-CC-CCcCEEEE--e
Confidence 35568888776 33122222 34444444444311 11122322 23344445543221 11 01357888 9
Q ss_pred CCchhHHHHHHHHHHHhc---CCCEEEEcCCCCCChHH-HHHHcCCe------------EEEEEeecCCCCCCCHHHHHH
Q 018820 149 LSGTGSLRVGAEFLARHY---HQRTIYIPQPTWGNHPK-VFTLAGLS------------VKSYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~ 212 (350)
++|++|...+..+..... ....|+...-+|.+... .+...|-. +..+|+ .|.+.+++
T Consensus 141 ~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~ 213 (442)
T TIGR03372 141 NSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLK 213 (442)
T ss_pred CCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHH
Confidence 999999988766543332 23578888888876643 22222211 122222 36677777
Q ss_pred Hhhc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 213 DLGS---APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 213 ~l~~---~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.++. ...+.+++++-.-.---|.. ++++-++++.++|++||+++|.||+..+|.-.+ + .+....+. -...++
T Consensus 214 ~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG--~-~~a~e~~g-v~PDiv 289 (442)
T TIGR03372 214 ALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG--K-MFACEHEG-VQPDIL 289 (442)
T ss_pred HHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc--c-chhhhhcC-CCCCee
Confidence 6643 22334455544333334554 468889999999999999999999998873221 1 12222221 112343
Q ss_pred EEeccccccCccC-cceeEEEEeeC
Q 018820 289 IAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 289 ~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
+|+|.+| .| +-+|.++ +.
T Consensus 290 ---t~gK~lg-~G~~Pigavv--~~ 308 (442)
T TIGR03372 290 ---CLAKALG-GGVMPIGATI--AT 308 (442)
T ss_pred ---eehhhhc-CCcccceEEE--ec
Confidence 3899998 78 6899866 65
No 281
>PRK15029 arginine decarboxylase; Provisional
Probab=98.76 E-value=1.8e-07 Score=97.29 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=124.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
+.|...=-|..|..+||.+ .-..+ ++|+|.++.. .+++.+.+||+|+++.-+.-.....+...|++++++
T Consensus 203 p~G~I~eAq~~aA~~fgA~------~t~Fl--vNGST~gn~a--~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD------RSWSV--VVGTSGSNRT--IMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC------cEEEE--eCChhHHHHH--HHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 3454333344444457863 44566 9999999986 567788999999999988766666777999999888
Q ss_pred Ee-ecCCC--CCCC-----HHHHHHHhhcCCCCc-------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 196 RY-YDPAT--RGLN-----FQGLLEDLGSAPAGA-------IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 196 ~~-~~~~~--~~~d-----~~~l~~~l~~~~~~~-------~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
+- ++..+ .+++ ++.+++.++..+..+ .++++++| +=-|++.+. ++|++.|.++++.+++||
T Consensus 273 ~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di---~~I~~~~h~~~~~llvDE 348 (755)
T PRK15029 273 VPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNA---KEAQDLLEKTSDRLHFDE 348 (755)
T ss_pred cccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCH---HHHHHHHHhcCCeEEEEC
Confidence 53 22111 2334 889999987654322 25555443 345777764 677999999999999999
Q ss_pred CCCCCC-CCCCCCchHHHHHHh----h-cCCcEEEEeccccccCccCcceeEEEEeeCCh-h-HHHHHHHHHHHhh
Q 018820 261 AYQGFA-SGSLDSDAQSVRMFV----A-DGGECFIAQSYAKNLGLYGERVGALSIVCKTA-D-VAGRVESQVKLVI 328 (350)
Q Consensus 261 aY~~~~-~~~~~~~~~~~~~~~----~-~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~-~-~~~~~~~~l~~~~ 328 (350)
||..+. +.+ ..+....+. . .+..+++++|.-|++ +++.-|.++.+-.++ . ..+++...+..++
T Consensus 349 AhGah~~F~~---~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~~q 419 (755)
T PRK15029 349 AWYGYARFNP---IYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHA 419 (755)
T ss_pred ccccccccCc---cccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHHHc
Confidence 998743 321 111111120 1 344679999999985 788888665443331 1 1245555444433
No 282
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.76 E-value=4.5e-08 Score=91.22 Aligned_cols=190 Identities=14% Similarity=0.098 Sum_probs=104.5
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc----C--CCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY----H--QRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~----~--gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
.++|.+.|.+++.-.+....+...|++ +.|+|+.+..+ +.++.. . --.|+...|.|+.|...-....-..
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~Aa--lyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~ 120 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAA--LYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL 120 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHH--HHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHH--HHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC
Confidence 588999998883322222222456666 99999999774 344321 1 1578999999999987765333222
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
....- |...|. ........+=++++||||.|..- +.+ ++..+..+|.|-+|.+=.|..
T Consensus 121 y~w~G-da~~~~----------~~~~~~~~IElVTSPNNPDG~lr-----~~V---~~g~~~k~I~D~AYYWPhyTp--- 178 (363)
T PF04864_consen 121 YKWAG-DASNFK----------NSDNPSPYIELVTSPNNPDGQLR-----EAV---LNGSSGKVIHDLAYYWPHYTP--- 178 (363)
T ss_dssp EEEEE-ECCCGT----------T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS----
T ss_pred ccccc-cHHhhc----------cCCCCCCeEEEEeCCCCCccccc-----chh---cCCCCcceeeeeeeecccccc---
Confidence 22221 332221 11124466788999999999542 222 245567789999998866642
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+..- .++=|.+.++||.-|-+|-|+||.+ ..|+++.+++.. .+.....+++.=+|.=+..+|
T Consensus 179 ----I~~~---aD~DiMLFT~SK~TGHAGSR~GWAl--VKD~~Va~kM~~----y~~lnTiGvS~dsQLRa~kiL 240 (363)
T PF04864_consen 179 ----ITAP---ADHDIMLFTLSKLTGHAGSRFGWAL--VKDEEVAKKMTK----YMELNTIGVSRDSQLRALKIL 240 (363)
T ss_dssp ------S----B--SEEEEEHHHHCS-GGG-EEEEE--ES-HHHHHHHHH----HHHHHCSS--HHHHHHHHHHH
T ss_pred ----cCCC---CCCceEEEEEecccCccccccceee--ecCHHHHHHHHH----HHHHhcccCcHHHHHHHHHHH
Confidence 2111 2345789999999999999999988 888766555544 333344567777776555555
No 283
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.72 E-value=2.9e-06 Score=84.76 Aligned_cols=218 Identities=15% Similarity=0.153 Sum_probs=125.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+..-||+..|.-...-|. -.++++++..+++. ... . |.. ..+....+|+.+... .+. .++|.+ +++
T Consensus 97 dG~~yiD~~~g~g~~~lGh-~~p~v~~av~~ql~--~~~-~-~~~---~~~~~~~lAe~l~~~-~p~--~~~v~f--~~S 163 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGH-ADDEVLAALAETMK--KGT-S-FGA---PCLLENVLAEMVIDA-VPS--VEMVRF--VNS 163 (474)
T ss_pred CCCEEEEecccccccccCC-CCHHHHHHHHHHHh--hCC-C-CCC---CCHHHHHHHHHHHHh-CCC--CCEEEE--eCC
Confidence 3556788876642112222 12344444444443 221 1 211 123445556664332 121 468888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-HHc-------------CC------eEEEEEeecCCCCCCCHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-TLA-------------GL------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~-------------G~------~~~~v~~~~~~~~~~d~~~l 210 (350)
|++|...+..+-......++|+...-+|.+....+ ... |. .+..+|+ -|++.+
T Consensus 164 GsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l 236 (474)
T PLN02482 164 GTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAV 236 (474)
T ss_pred hHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHH
Confidence 99999887665433333467887777787754221 110 11 0111221 268888
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
++.++......+++++-.-..-.|..+ +++-|++|.++|++||+++|+||+..+|..+. ......+. -...+
T Consensus 237 ~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~~~~g-v~PDi-- 309 (474)
T PLN02482 237 KKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQEYFG-ITPDL-- 309 (474)
T ss_pred HHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHhHHhC-CCCCE--
Confidence 888875544444555544444456554 57889999999999999999999998885431 11222221 11233
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHH
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
-+|+|.+| .|+-+|.+. +. +++.+.+
T Consensus 310 -~t~gK~lg-gG~Pigav~--g~-----~ei~~~~ 335 (474)
T PLN02482 310 -TTLGKVIG-GGLPVGAYG--GR-----REIMEMV 335 (474)
T ss_pred -EEecchhh-CCCceEEEE--Ec-----HHHHHhh
Confidence 47799998 899999865 55 4555544
No 284
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.72 E-value=2.4e-06 Score=84.44 Aligned_cols=165 Identities=18% Similarity=0.185 Sum_probs=96.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHH----HHHcCCe---E-EEE--EeecCCC---CCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKV----FTLAGLS---V-KSY--RYYDPAT---RGLN 206 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~----~~~~G~~---~-~~v--~~~~~~~---~~~d 206 (350)
++|.+ +++|++|...+..+. +...| ..|+...-+|.+.... ....+-. . ..+ +...+.. .--|
T Consensus 111 ~~v~f--~~SGsEA~e~AiklA-r~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (433)
T PRK00615 111 HKIRF--VSSGTEATMTAVRLA-RGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYND 187 (433)
T ss_pred CEEEE--eCchHHHHHHHHHHH-HHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCC
Confidence 58888 999999998876553 33334 5777777778775311 1111100 0 000 0000000 0126
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
.+.+++.++....+..++++-.-..=.|.. ++++-+++|.++|++||+++|.||+..+|..+. ......+ .-..
T Consensus 188 ~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~----~ga~~~~-gv~P 262 (433)
T PRK00615 188 FQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ----GGAAAIY-HVKP 262 (433)
T ss_pred HHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH----hHHHHhc-CCCC
Confidence 788888886543334444444333333554 468889999999999999999999998884442 1122112 1112
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHH
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
.++ .|+|.+| .|+-+|+++ +. +++.+.+
T Consensus 263 Di~---~~gK~lg-gG~p~~av~--~~-----~~i~~~~ 290 (433)
T PRK00615 263 DIT---VYGKILG-GGLPAAAVV--AH-----KSIMDHL 290 (433)
T ss_pred CeE---EEccccc-CCcceeeee--ec-----HHHHhhh
Confidence 343 3899998 788888766 65 4555544
No 285
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.72 E-value=1.8e-06 Score=83.53 Aligned_cols=206 Identities=15% Similarity=0.132 Sum_probs=118.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|.--..-|. -.++++++..+++.+-......| +..-..+|-+.++++. + .+++.. +++
T Consensus 22 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~S 89 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV-N-------YEYVYM--GNS 89 (364)
T ss_pred CCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc-C-------CCEEEE--eCc
Confidence 3556889877642112222 12344444444443111111123 2222344445554442 1 357888 999
Q ss_pred chhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHH-HHc-------CCe-----EEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 151 GTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVF-TLA-------GLS-----VKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~-~~~-------G~~-----~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
|++|+..+..+.. ...| ++|+...-+|....... ... +.. +..+|+ .|.+.+++.+..
T Consensus 90 GseA~e~Alklar-~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~ 161 (364)
T PRK04013 90 GTEAVEAALKFAR-LYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITK 161 (364)
T ss_pred hHHHHHHHHHHHH-HHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcC
Confidence 9999998766543 3345 88998888887764322 211 111 122222 267788877753
Q ss_pred CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 217 APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
. ..++++..-+.-.|. .++++-|++|.++|++||+++|+||+..+|..|. ......+ .-...+++ |+|
T Consensus 162 ~---~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~----~~a~~~~-gv~PDiv~---~gK 230 (364)
T PRK04013 162 E---TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK----FLAIEHY-KVEPDIVT---MGK 230 (364)
T ss_pred C---cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc----hhHHHhc-CCCCCEEE---ecc
Confidence 2 334554444433444 4577889999999999999999999999986552 1222222 11224443 499
Q ss_pred ccCccCcceeEEE
Q 018820 296 NLGLYGERVGALS 308 (350)
Q Consensus 296 ~~gl~G~RvG~l~ 308 (350)
.+| .|+-+|.++
T Consensus 231 ~lg-gG~P~~a~~ 242 (364)
T PRK04013 231 GIG-NGVPVSLTL 242 (364)
T ss_pred ccc-CCceeEEEE
Confidence 998 689999876
No 286
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.72 E-value=1.7e-06 Score=86.46 Aligned_cols=149 Identities=19% Similarity=0.151 Sum_probs=89.4
Q ss_pred CCcE-EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCC---CCCChHHHHH-----HcCCeEE--EEEeecCCCCCCCHH
Q 018820 140 ENRV-TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQP---TWGNHPKVFT-----LAGLSVK--SYRYYDPATRGLNFQ 208 (350)
Q Consensus 140 ~~~v-~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P---~y~~~~~~~~-----~~G~~~~--~v~~~~~~~~~~d~~ 208 (350)
.+.+ +-+|.++|+.|... .+.+++.|||+|+..+. .+..|..... ..+..+. +|.. ++++..+|++
T Consensus 97 ~~~~~~nv~~~SG~~AN~a--v~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d 173 (475)
T PLN03226 97 PEKWGVNVQPLSGSPANFA--VYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYD 173 (475)
T ss_pred cceeEEecCcCchHHHHHH--HHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHH
Confidence 3444 33677888888876 56677899999998553 3333433321 1111122 3343 4556789999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
.+++.+....+ .+|++. ..+ +|...+. ++|.++|+++|.+++.|++..- +.-.+. ...+ + . .-=
T Consensus 174 ~Le~~l~~~~p--klIv~~-~S~-~s~~~D~---a~i~~ia~~~ga~LlvD~AH~~Gli~~~~--~~~p---~-~--~~D 238 (475)
T PLN03226 174 KLEKKAMLFRP--KLIIAG-ASA-YPRDWDY---ARMRKIADKVGALLMCDMAHISGLVAAQE--AASP---F-E--YCD 238 (475)
T ss_pred HHHHHHhhcCC--eEEEEe-cCc-CCCccCH---HHHHHHHHHcCCEEEEEchhhhCcccCCC--CCCC---C-C--CCe
Confidence 99998875322 244442 233 5665554 5778899999999999997653 322211 0001 1 1 122
Q ss_pred EEEeccccccCccCcceeEEE
Q 018820 288 FIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~ 308 (350)
+++.|++|++ .|-|-|++.
T Consensus 239 iv~~t~hK~L--~GP~Gg~I~ 257 (475)
T PLN03226 239 VVTTTTHKSL--RGPRGGMIF 257 (475)
T ss_pred EEEecCcccc--cCCCceEEE
Confidence 6789999998 344447665
No 287
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.71 E-value=1.4e-06 Score=86.41 Aligned_cols=211 Identities=17% Similarity=0.188 Sum_probs=136.1
Q ss_pred ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-h
Q 018820 90 PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-H 165 (350)
Q Consensus 90 p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~ 165 (350)
+++.+...++.......+-.+.+..| +..++-+.+..+ +++.+ +......|.|||+++.++...... .
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~d~~~~p--~a~~~E~~~v~~l~~l~~~~------~~~~G~~t~GgTean~lal~aar~~~ 143 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLGDPDESP--AAAELEERVVNMLSDLLGAP------EEASGTFTSGGTEANLLALLAARERW 143 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccCh--hHHHHHHHHHHHHHHHhCCC------CCCceEEEcChHHHHHHHHHHHHHHH
Confidence 44455666665554422112222323 455666666666 34442 222222399999999876433221 1
Q ss_pred c--C---C------CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCC
Q 018820 166 Y--H---Q------RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTG 234 (350)
Q Consensus 166 ~--~---g------d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG 234 (350)
. . + .+|+++.=....+...++..|+....++. ++.+..+|++++++.+.+.+... +|+-.-+.-|||
T Consensus 144 ~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~-~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G 221 (460)
T COG0076 144 RKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT-VPTDYRIDVDALEEAIDENTIGG-VVVGTAGTTDTG 221 (460)
T ss_pred HHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe-ccCccccCHHHHHHHHHhhccCc-eEEEEecCCCCC
Confidence 1 1 1 16888888888888999999999999998 65467899999999998866533 355556788998
Q ss_pred CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE-EEEeccccccCccCcceeEEEEeeCC
Q 018820 235 VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC-FIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 235 ~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
.+ +.+++|.++|+++++++.+|-||.+|.---.+.+.. +...-+++ -+.-++-|. |+.=.-+||++ ..|
T Consensus 222 ~i---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~----~~f~l~~vdSIt~d~HK~-g~aP~~~G~il--~rd 291 (460)
T COG0076 222 SI---DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR----WDFGLEGVDSITVDGHKY-GLAPIGCGVVL--FRD 291 (460)
T ss_pred cc---CCHHHHHHHHHHcCCcEEEEccccceeecccCccch----hhcCCCCceEEEECcccc-cCCCCCceEEE--EEC
Confidence 53 567888999999999999999999976421112111 11111222 234478995 56889999988 888
Q ss_pred hhHHHHH
Q 018820 314 ADVAGRV 320 (350)
Q Consensus 314 ~~~~~~~ 320 (350)
++.+.+.
T Consensus 292 ~e~l~~~ 298 (460)
T COG0076 292 EEALRRI 298 (460)
T ss_pred HHHhhhh
Confidence 7544443
No 288
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.69 E-value=2.3e-07 Score=88.66 Aligned_cols=139 Identities=20% Similarity=0.219 Sum_probs=99.5
Q ss_pred CCCCCCCCC--CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHH--HHHhc--CCCEEEEcCCCCCC
Q 018820 107 RSRVKEYLP--IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEF--LARHY--HQRTIYIPQPTWGN 180 (350)
Q Consensus 107 ~~~~~~Y~p--~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l--~~~~~--~gd~Vlv~~P~y~~ 180 (350)
+...|.|+- ..-+.+-|+.+|+.+ |.+ +++|++ |.|+|++.+++..= .+... .|..|+++.--.+.
T Consensus 32 PsS~H~~G~~A~~~ve~AR~~iA~ll-ga~-----~~eIiF--TSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~a 103 (386)
T COG1104 32 PSSLHSFGREARKAVEEAREQIAKLL-GAD-----PEEIIF--TSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPA 103 (386)
T ss_pred ccchhHhHHHHHHHHHHHHHHHHHHh-CCC-----CCeEEE--ecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHH
Confidence 444555632 223566777777775 433 689999 99999999885321 22111 46778877655554
Q ss_pred hHHHHHH---cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 181 HPKVFTL---AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 181 ~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
-.+.++. .|++|.++|. +.+ ..+|++++++++++.+ +++-+-..||-||++-+. ++|.++|+++++++.
T Consensus 104 Vl~~~~~Le~~g~~Vtyl~V-~~~-G~v~~e~L~~al~~~T---~LVSim~aNnE~G~IQpI---~ei~~i~k~~~i~fH 175 (386)
T COG1104 104 VLNTCRYLERQGFEVTYLPV-DSN-GLVDLEQLEEALRPDT---ILVSIMHANNETGTIQPI---AEIGEICKERGILFH 175 (386)
T ss_pred HHHHHHHHHhcCCeEEEeCC-CCC-CeEcHHHHHHhcCCCc---eEEEEEecccCeeecccH---HHHHHHHHHcCCeEE
Confidence 4555554 4999999998 664 5799999999998654 377777899999998875 566899999999999
Q ss_pred EccC
Q 018820 258 FDSA 261 (350)
Q Consensus 258 ~Dea 261 (350)
.|-+
T Consensus 176 vDAv 179 (386)
T COG1104 176 VDAV 179 (386)
T ss_pred Eehh
Confidence 9864
No 289
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.67 E-value=7.5e-06 Score=80.99 Aligned_cols=167 Identities=17% Similarity=0.149 Sum_probs=100.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCCeEEE--------EE-eecCCC---CCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGLSVKS--------YR-YYDPAT---RGLN 206 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~~~~--------v~-~~~~~~---~~~d 206 (350)
.+++.+ +++|++|...+..+........+|+...-+|..... .+...|..... ++ ...++. .-.|
T Consensus 109 ~~~v~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 186 (428)
T PRK12389 109 LEKVRF--VNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFND 186 (428)
T ss_pred CcEEEE--eCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCC
Confidence 468888 999999998876654333334677777777776543 22222211100 00 000000 0126
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
++.+++.++.......++++-.-..-.|.. ++++-+++|.++|+++|+++|.||+..+|..+. ......+ .-..
T Consensus 187 ~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~~a~~~~-gv~P 261 (428)
T PRK12389 187 IEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----GGAQDLL-GVEP 261 (428)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----chhhHHh-CCCC
Confidence 888888886544334455554444445654 578889999999999999999999999884431 0111112 1112
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHH
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
.+ -+|+|.++ .|+-+|.++ +. +++.+.+
T Consensus 262 Di---vt~gK~lg-gG~Pi~av~--~~-----~~i~~~~ 289 (428)
T PRK12389 262 DL---TALGKIIG-GGLPIGAYG--GR-----KDIMEQV 289 (428)
T ss_pred Ce---eeechhhc-CCCceeEEe--EH-----HHHHhhh
Confidence 33 36799998 789999865 55 4455544
No 290
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.63 E-value=2.5e-06 Score=80.08 Aligned_cols=201 Identities=15% Similarity=0.112 Sum_probs=120.7
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY 172 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl 172 (350)
-+.+.+++.... ....-.|+..+-..++-+.+++. +|. ..+++ +.+||++..+ .+.+.+.||+.|+
T Consensus 13 ~~~m~eam~~a~--~~~~~~YG~D~~~~~~e~~~ae~-~g~-------~a~~F--v~sGT~aN~l--al~~~~~~~~~vi 78 (342)
T COG2008 13 TPEMREALAAAN--AVGDDVYGEDPTTNALEQRIAEL-FGK-------EAALF--VPSGTQANQL--ALAAHCQPGESVI 78 (342)
T ss_pred CHHHHHHHHhcc--ccCCCCCCCCHHHHHHHHHHHHH-hCC-------ceEEE--ecCccHHHHH--HHHHhcCCCCeEE
Confidence 667777666543 12233465544444444444444 343 35677 8999999998 5566789999998
Q ss_pred EcCCCCCChH--HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc----CCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 018820 173 IPQPTWGNHP--KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS----APAGAIVLLHACAHNPTGVDPTLQQWERIR 246 (350)
Q Consensus 173 v~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~ 246 (350)
+..-..-.-. ......+ ...+++..+..+..++++.++..+.. ..+.+.+++.+ .+|--|++++.+++++|.
T Consensus 79 ~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~-~~te~GtVy~l~el~~i~ 156 (342)
T COG2008 79 CHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN-TATEGGTVYPLDELEAIS 156 (342)
T ss_pred EeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee-ccCCCceecCHHHHHHHH
Confidence 8754432111 1112111 12333332334578999999998874 23334455553 344669999999999999
Q ss_pred HHHHhcCcEEEEccCCCC--CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 247 QLMRSKGLLPFFDSAYQG--FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 247 ~~~~~~~~~ii~DeaY~~--~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
++|+++++.+-.|=+-.. ....+ .+ .... ..+..++ .-++||+.+ +=+|.++ ..|.+..+++.
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg--~~---~~~~-~~~~D~v-~~~~tK~g~---~~~gAiv--~gn~~~~~~a~ 221 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALG--VA---LKTI-KSYVDSV-SFCLTKGGG---APVGAIV--FGNRDFAKRAR 221 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcC--CC---HHHH-HhhCCEE-EEecccCCc---ceeeeEE--EcCHHHHHHHH
Confidence 999999999999965321 11111 11 1111 1222344 446899976 5567777 77876655544
No 291
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.62 E-value=5.7e-06 Score=82.46 Aligned_cols=160 Identities=16% Similarity=0.136 Sum_probs=93.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcC--C-CEEEEcCCCCCChHH-HHHHcCCeEEE---EEeecCCC---CCCCHHH
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYH--Q-RTIYIPQPTWGNHPK-VFTLAGLSVKS---YRYYDPAT---RGLNFQG 209 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~--g-d~Vlv~~P~y~~~~~-~~~~~G~~~~~---v~~~~~~~---~~~d~~~ 209 (350)
.+++.+ +++|++|...+..+-..... | ..|+...-+|.+... .+...|-.... .|. .++. .-.|.+.
T Consensus 141 ~~~v~f--~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ 217 (459)
T PRK11522 141 LKYSFF--CNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPL-LPGFRHVPFGNIEA 217 (459)
T ss_pred CCEEEE--eCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCC-CCCCcccCCCCHHH
Confidence 357888 99999999887665433332 3 357777778876643 22222211111 111 0000 1126777
Q ss_pred HHHHhhc---CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 210 LLEDLGS---APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 210 l~~~l~~---~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
+++.++. ...+..++++-.-.-=.|. .++++-++++.++|++||+++|.||+..+|.-.+ + .+....+.-. .
T Consensus 218 l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG--~-~~a~e~~gv~-P 293 (459)
T PRK11522 218 MRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG--K-MFACEHENVQ-P 293 (459)
T ss_pred HHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc--h-hhhhhccCCC-C
Confidence 7777753 2233344444433333455 4578889999999999999999999998873221 1 1122222111 2
Q ss_pred cEEEEeccccccCccC-cceeEEEEeeC
Q 018820 286 ECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
.++ +|+|.+| .| +-+|.++ +.
T Consensus 294 Div---t~gK~lg-gG~~Pigav~--~~ 315 (459)
T PRK11522 294 DIL---CLAKALG-GGVMPIGATI--AT 315 (459)
T ss_pred CEE---Eechhhh-CCCccceeEE--Ec
Confidence 333 7799998 77 6899877 65
No 292
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.61 E-value=1.2e-05 Score=80.21 Aligned_cols=160 Identities=16% Similarity=0.206 Sum_probs=93.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCC-------------eEEEEEeecCCC--CC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGL-------------SVKSYRYYDPAT--RG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~~~--~~ 204 (350)
++|.+ +++|++|...+..+........+|+...-+|.+... .+...|. .+..+|+.+... +.
T Consensus 114 ~~v~f--~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 191 (457)
T PRK05639 114 PKVLF--GLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWG 191 (457)
T ss_pred CEEEE--eCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccc
Confidence 68888 999999998876654333344678877877876432 2222221 133333311100 00
Q ss_pred ----CCHH--------HHHHHhhc---CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 205 ----LNFQ--------GLLEDLGS---APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 205 ----~d~~--------~l~~~l~~---~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
-|.+ .+++.+.. .+...+.+++-.-+--.|. .++++-+++|.++|++||+++|.||+..+|...
T Consensus 192 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt 271 (457)
T PRK05639 192 INGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRT 271 (457)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcC
Confidence 0222 23333321 1333445555444444566 567899999999999999999999999887432
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+ ..+....+ .-...+++ |+|.++ .|+-+|+++ +.
T Consensus 272 G---~~~a~~~~-gv~PDiv~---~gK~l~-gG~pi~av~--~~ 305 (457)
T PRK05639 272 G---KWFASEWF-EVKPDLII---FGKGVA-SGMGLSGVI--GR 305 (457)
T ss_pred c---hHHHHHhc-CCCCCEEE---echhhc-CCCcceeEE--eh
Confidence 2 11122222 11224444 799998 788899876 65
No 293
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.61 E-value=1.2e-06 Score=86.57 Aligned_cols=157 Identities=13% Similarity=0.083 Sum_probs=106.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh------cC-----CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHH
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH------YH-----QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~------~~-----gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 209 (350)
+++....|.|||+|..++....... .. +..|+++.-........++..|++++.+|. +++++.+|++.
T Consensus 100 ~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~-d~~~~~vd~~~ 178 (431)
T TIGR01788 100 AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM-DPGRYVIDPEQ 178 (431)
T ss_pred CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec-CCCceeeCHHH
Confidence 3555444899999998753221100 11 136888888877778888888999999998 66445799999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc------CcEEEEccCCCCCC----CCCCCCchHHHHH
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK------GLLPFFDSAYQGFA----SGSLDSDAQSVRM 279 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~------~~~ii~DeaY~~~~----~~~~~~~~~~~~~ 279 (350)
|++.+.+.+ .+|+....+|.||.+-+. ++|+++|+++ ++++.+|-+|.++. .+.. .. .
T Consensus 179 L~~~i~~~t---~lV~~t~g~t~tG~idpi---~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~-----~~-~ 246 (431)
T TIGR01788 179 VVEAVDENT---IGVVCILGTTYTGEYEDV---KALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL-----EW-D 246 (431)
T ss_pred HHHHHhhCC---eEEEEEeCCCCCcccCCH---HHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc-----hh-h
Confidence 999997654 377888899999998886 4557778888 89999999998654 2210 11 1
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
|...+. --+.-|.-|.+ +.-..+|++. ..++
T Consensus 247 ~~~~~~-DSis~s~HK~~-~~P~g~G~l~--~r~~ 277 (431)
T TIGR01788 247 FRLPRV-KSINVSGHKYG-LVYPGVGWVI--WRDE 277 (431)
T ss_pred cCCCCc-eEEEECchhcc-CCCCCcEEEE--EeCh
Confidence 111111 12456778954 3566788877 5554
No 294
>PLN02263 serine decarboxylase
Probab=98.61 E-value=1.8e-06 Score=85.40 Aligned_cols=197 Identities=12% Similarity=0.056 Sum_probs=128.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHH---HhCCCCCCccCCc--EEEEecCCchhHHHHHHHHHHH-hc
Q 018820 94 NVVRKAEQQLVNDRSRVKEYLPI-VGLAEFNKLSAKL---ILGADSPAIRENR--VTTVQCLSGTGSLRVGAEFLAR-HY 166 (350)
Q Consensus 94 ~~v~~a~~~l~~~~~~~~~Y~p~-~G~~~lr~aia~~---~~g~~~~~~~~~~--v~~~~t~G~~~al~l~~~l~~~-~~ 166 (350)
..+.+.+....++-++...++|. -+..++-+.+.+| ++|.+ +++ =.+ |.|||++...+. +.++ ..
T Consensus 105 s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p-----~~~~~G~v--tsGGTEaNL~Al-~aARe~~ 176 (470)
T PLN02263 105 GALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIE-----KNEYWGYI--TNCGTEGNLHGI-LVGREVF 176 (470)
T ss_pred hhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCC-----CCCCeEEE--eCcHHHHHHHHH-HHHHhhc
Confidence 34555555544333444444431 2456777777777 34432 222 244 999999997753 2333 23
Q ss_pred CCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 018820 167 HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIR 246 (350)
Q Consensus 167 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~ 246 (350)
+...|++++-+......+++..|++++.+|. ++ ++.+|++.|++.+.+...++++++.+.+.-+||.+=+ +++|.
T Consensus 177 ~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~-d~-~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa 251 (470)
T PLN02263 177 PDGILYASRESHYSVFKAARMYRMECVKVDT-LV-SGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVI 251 (470)
T ss_pred CCcEEEEcCCccHHHHHHHHhcCCcceEecc-CC-CCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHH
Confidence 4457888988888888899999999999998 54 4689999999999876655777777888889997654 66778
Q ss_pred HHHHhcCc-----EEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 247 QLMRSKGL-----LPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 247 ~~~~~~~~-----~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
++|+++|+ |+-+|-||.++..... ++.+.+ .|.. +..-| .-+.-|.++ .-+-+|.+.
T Consensus 252 ~i~~~~g~~~~~iwlHVDAA~GG~~lPf~-~~~~~~-df~~-~vDSI-svD~HK~l~-~P~~cgvll 313 (470)
T PLN02263 252 KTLEECGFSQDRFYIHCDGALFGLMMPFV-KRAPKV-TFKK-PIGSV-SVSGHKFVG-CPMPCGVQI 313 (470)
T ss_pred HHHHHcCCccCCeeEEEeccchhhHhhhc-cccccc-CCCc-CccEE-EECCccccC-CCcCEEEEE
Confidence 88889986 9999999998764211 111111 1111 11122 335668665 778888877
No 295
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.55 E-value=1.2e-06 Score=90.46 Aligned_cols=176 Identities=11% Similarity=0.080 Sum_probs=112.5
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
...|...=-|..|..+||.+ .-..+ ++|+|.++.. .+++.+.+||.|++..-+.-.....+.+.|+++++
T Consensus 192 ~~~G~i~eAe~~AA~~fgAd------~tyfv--vNGTS~~n~a--v~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 192 DHSGPHKEAEEYIARVFNAD------RSYMV--TNGTSTANKI--VGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CCChHHHHHHHHHHHHhCCC------cEEEE--eCchHHHHHH--HHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 34454333344444467763 34555 9999999987 56677899999999998865555667789999998
Q ss_pred EEe-ecCCC--CCCC-----HHHHHHHhhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 195 YRY-YDPAT--RGLN-----FQGLLEDLGSAPA--GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 195 v~~-~~~~~--~~~d-----~~~l~~~l~~~~~--~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++. +++-+ .+++ .+.+++.+++.+. ++..+++.+| +=-|++++.+ +|++.|..++ |++||||..
T Consensus 262 l~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~---~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 262 FRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred ecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHH---HHHHHhCCCC--EEEEccchh
Confidence 854 22111 2334 8999999987653 2224555554 5568888875 4566666666 689999987
Q ss_pred CC-CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 265 FA-SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 265 ~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+. +.+.-++..++...+..++.+++++|.-|.+ +|+.-+.++
T Consensus 336 h~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~L 378 (714)
T PRK15400 336 YTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMI 378 (714)
T ss_pred hhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHH
Confidence 43 3221111122222222224689999999986 677766443
No 296
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.54 E-value=2.3e-06 Score=82.27 Aligned_cols=107 Identities=14% Similarity=0.091 Sum_probs=81.6
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
+.+|+.++.. .+..++.|||+|++..-.++.. ..+++++|.+++.+.. + .+..+|++.+++.+++.+..+ ++.
T Consensus 62 ~gsGt~amEA--av~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~-~-wg~~v~p~~v~~~L~~~~~~~-~V~ 136 (383)
T COG0075 62 SGSGTLAMEA--AVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV-E-WGEAVDPEEVEEALDKDPDIK-AVA 136 (383)
T ss_pred cCCcHHHHHH--HHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC-C-CCCCCCHHHHHHHHhcCCCcc-EEE
Confidence 6677888877 4456678999999887766544 6788999999999877 3 566799999999999665433 333
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
+...--+||+..+ +++|+++|++||.++|+|-+=
T Consensus 137 ~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVs 170 (383)
T COG0075 137 VVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVS 170 (383)
T ss_pred EEeccCcccccCc---HHHHHHHHHHcCCEEEEEecc
Confidence 3333558887774 677899999999999999753
No 297
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.53 E-value=4.5e-06 Score=89.38 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=117.2
Q ss_pred CCCCCC---CCCcHH----HHHHHHHHHhCCCCCCccCCcEEEEecCCch----hHHHHHHHHHHHhcC-CC----EEEE
Q 018820 110 VKEYLP---IVGLAE----FNKLSAKLILGADSPAIRENRVTTVQCLSGT----GSLRVGAEFLARHYH-QR----TIYI 173 (350)
Q Consensus 110 ~~~Y~p---~~G~~~----lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~----~al~l~~~l~~~~~~-gd----~Vlv 173 (350)
.|-|.| .+|..+ +|+.++++ +|. ++|.+ +++++ .++.++ +.+...+ || .|++
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i-~g~-------~~v~f--~pnaga~ge~a~~~v--i~~~~~~~Gd~~r~~vli 621 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEI-TGF-------DSFSL--QPNAGAAGEYAGLMV--IRAYHLSRGDHHRNVCII 621 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH-hCC-------CeEEE--cCCCcHHHHHHHHHH--HHHHHhccCCCCCCEEEe
Confidence 455777 356544 45555554 343 67887 66666 566553 3444544 77 8999
Q ss_pred cCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 018820 174 PQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 174 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~ 253 (350)
+.-........+...|++++.+|+ +++ ..+|++.|++.+.+++++..+|++++|+|-+|+..+ +++|.++|+++|
T Consensus 622 ~~~aH~sn~a~a~~~G~~vv~v~~-d~~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~G 696 (993)
T PLN02414 622 PVSAHGTNPASAAMCGMKIVVVGT-DAK-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNG 696 (993)
T ss_pred CCCcCccCHHHHHHCCCEEEEecc-CCC-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcC
Confidence 988887777788889999999998 654 579999999999865545568888999999987754 677889999999
Q ss_pred cEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC----ccCcceeEEE
Q 018820 254 LLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG----LYGERVGALS 308 (350)
Q Consensus 254 ~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g----l~G~RvG~l~ 308 (350)
.+++.|-+..- ....+ ..+. +.+.. +++.|.-|.|+ ..|=.+|++.
T Consensus 697 alv~vDgAq~~-a~~~l----~~p~---~~GaD-~~~~s~HK~f~~P~G~GGPg~G~l~ 746 (993)
T PLN02414 697 GQVYMDGANMN-AQVGL----TSPG---FIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG 746 (993)
T ss_pred CEEEEEecCHH-hccCc----CCcc---ccCCC-EEEecCCccCCcCcccCCCCeeeEE
Confidence 99999987622 11000 0010 11222 44566788665 3455688765
No 298
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.51 E-value=5.4e-06 Score=85.65 Aligned_cols=191 Identities=11% Similarity=0.035 Sum_probs=116.9
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
..|...=-|..|..+||.+ .-..+ ++|+|.++.. .+++.+.+||.|++..-+.-.....+.+.|++++++
T Consensus 193 ~~G~i~eAe~~aA~~fgAd------~tyfv--vNGTS~~n~a--v~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE------QSYIV--TNGTSTSNKI--VGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred CChHHHHHHHHHHHHhCCC------cEEEE--eCChHHHHHH--HHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEe
Confidence 4454333344444457763 34555 9999999988 567789999999999988655556677899999987
Q ss_pred Ee-ecCCC--CCCCH-----HHHHHHhhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE-EEccCCCC
Q 018820 196 RY-YDPAT--RGLNF-----QGLLEDLGSAPA--GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP-FFDSAYQG 264 (350)
Q Consensus 196 ~~-~~~~~--~~~d~-----~~l~~~l~~~~~--~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i-i~DeaY~~ 264 (350)
+- +++-+ .+++. +.+++.+++.+. ++..+++.+| +=-|++++.+++ ++.| |+.+ ++||||..
T Consensus 263 ~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I---~~~~---g~~~ilvDEAhga 335 (713)
T PRK15399 263 KPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWI---KQTL---DVPSIHFDSAWVP 335 (713)
T ss_pred cccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHH---HHHh---CCCEEEEeccchh
Confidence 53 22211 23445 888888887653 2245666555 567999987665 4444 4544 69999987
Q ss_pred CC-CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 265 FA-SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 265 ~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+. +.+.-.+..++........-+++++|.-|.+ +|+.-+.++.+-++- ..+++...+..
T Consensus 336 h~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~v-d~~~~n~a~~m 395 (713)
T PRK15399 336 YTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGEY-DEETFNEAFMM 395 (713)
T ss_pred hhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecCCC-CHHHHHHHHHH
Confidence 43 3221111122221101123577899999985 788888655443321 12345444443
No 299
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.50 E-value=2.8e-05 Score=76.32 Aligned_cols=253 Identities=15% Similarity=0.135 Sum_probs=139.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+..-|||..|..-..-|. -.+.++++..+++..-......|.+....-+|-+.+.+..-+. ..+.+.+ +++
T Consensus 54 dG~~ylDf~sgi~v~~~GH-~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~s 125 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGH-NHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNS 125 (447)
T ss_pred CCCEEEEcccCcchhccCC-CCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCC
Confidence 3556899988643223332 2244455555545422222333443333344444444432221 2577888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHc-------------CCeEEEEEeecCC--CCCC--------C
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLA-------------GLSVKSYRYYDPA--TRGL--------N 206 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~-------------G~~~~~v~~~~~~--~~~~--------d 206 (350)
|++|...+..+-.....+..|+...-.|.+-.. .+... .-.++.+|+.++- -++. .
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 999999987665444455678877777765432 22211 1125555552211 1111 1
Q ss_pred HHHHHHHhhc---CCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh
Q 018820 207 FQGLLEDLGS---APAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA 282 (350)
Q Consensus 207 ~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~ 282 (350)
.+.++..+.. .+...+.+++-.-+.--|+.. +++-++++.++|++||+++|.||+=.+|.--+ ..++...+--
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E~~gv 282 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFEHFGV 282 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhhhcCC
Confidence 2333333322 345566777766677777655 45666999999999999999999999987643 2244433321
Q ss_pred cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 283 DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 283 ~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
. ..+| ++||.+| .|+=+|.++ .. +++.+-.-..+..+|. .+.++..++..+|
T Consensus 283 ~-PDiv---t~aK~ig-~G~Pl~avv--~r-----~ei~~~~~g~~~~Tf~-GNpva~Aaa~AvL 334 (447)
T COG0160 283 E-PDIV---TLAKSLG-GGLPLSAVV--GR-----AEIMDWPPGGHGGTFG-GNPVACAAALAVL 334 (447)
T ss_pred C-CCEE---Eeccccc-CCCceeEEe--cc-----HHhcccCCcccCCCCC-cCHHHHHHHHHHH
Confidence 1 2344 4799999 699999766 54 4444422223334433 3444444444333
No 300
>PLN02271 serine hydroxymethyltransferase
Probab=98.49 E-value=8.7e-06 Score=81.56 Aligned_cols=204 Identities=19% Similarity=0.157 Sum_probs=123.3
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHH---HHHHhCCCCCCccCCcE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL------PIVGLAEFNKLS---AKLILGADSPAIRENRV 143 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~------p~~G~~~lr~ai---a~~~~g~~~~~~~~~~v 143 (350)
.+-|+|-..++.. .+.+.+++.....+ .....|+ ....+.++-... ++.+|+.+.. +.=
T Consensus 148 ~~~l~LIASEN~~-------S~av~~algS~ltn-kYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~----~~g 215 (586)
T PLN02271 148 FKGIELIASENFV-------CRAVMEALGSHLTN-KYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSE----KWG 215 (586)
T ss_pred hcCeeeccccccC-------CHHHHHHhcCcccc-cCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccc----ccc
Confidence 4567787776632 56666666554422 1112222 222222332222 2226765421 110
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---------HHcCCeEEEEEee-cCCCCCCCHHHHHHH
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---------TLAGLSVKSYRYY-DPATRGLNFQGLLED 213 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---------~~~G~~~~~v~~~-~~~~~~~d~~~l~~~ 213 (350)
+=||..+|+.|... .+.+++.|||+|+..+..+++|.... ...|..+..+||. ++++..+|.+++++.
T Consensus 216 aNVQp~SGs~AN~a--V~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~ 293 (586)
T PLN02271 216 VNVQPYSCTSANFA--VYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEK 293 (586)
T ss_pred cceeeccHHHHHHH--HHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHH
Confidence 22567888888877 56778899999999999888886542 3456555555541 556678999999984
Q ss_pred h-hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEe
Q 018820 214 L-GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQ 291 (350)
Q Consensus 214 l-~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 291 (350)
. ..+++ +|+...-.|| ..++ +++|.++|+++|+++++|.+.. ++.-.+. ...+ + .+ -=|+..
T Consensus 294 a~~~rPK---LII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~--~~sP---~--~~-aDvvt~ 357 (586)
T PLN02271 294 ALDFRPK---ILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKE--CVNP---F--DY-CDIVTS 357 (586)
T ss_pred hhhcCCe---EEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCc--CCCC---C--cC-CcEEEe
Confidence 4 43443 7777666777 3343 4666888899999999999875 3443321 0001 1 11 237788
Q ss_pred ccccccCccCcceeEEE
Q 018820 292 SYAKNLGLYGERVGALS 308 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~ 308 (350)
|..|++ .|=|-|.+.
T Consensus 358 TTHKtL--rGPrGG~I~ 372 (586)
T PLN02271 358 TTHKSL--RGPRGGIIF 372 (586)
T ss_pred CCcccC--CCCCceEEE
Confidence 999987 577778766
No 301
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.48 E-value=3.8e-06 Score=81.50 Aligned_cols=206 Identities=20% Similarity=0.221 Sum_probs=115.0
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC---CCC------cHHHHHHHHHHHhCCCCCCccCCcE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP---IVG------LAEFNKLSAKLILGADSPAIRENRV 143 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p---~~G------~~~lr~aia~~~~g~~~~~~~~~~v 143 (350)
.+.|+|-..++.. .+.+++++.....+. ....|+. ..| ++.|-...++.+|+.+. ...-
T Consensus 20 ~~~l~LiaSEN~~-------Sp~v~~al~S~l~nk-yaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~----~~w~ 87 (399)
T PF00464_consen 20 RSTLNLIASENYM-------SPAVREALGSDLTNK-YAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP----KEWY 87 (399)
T ss_dssp HHSEE-CTT------------HHHHHHHTSGGGGS--TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST----TTEE
T ss_pred hcCccccCccccc-------CHHHHHHhCCcceee-ccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc----ccce
Confidence 3578888776632 667777766654221 1122211 123 23333344444788751 2334
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---H--H-----HHcCCeEEEEEeecCCCCCCCHHHHHHH
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---V--F-----TLAGLSVKSYRYYDPATRGLNFQGLLED 213 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~--~-----~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 213 (350)
+-||..+|+.|... .+.+++.|||+|+..++...+|.. . . .....+.+.|++ ++++..+|.+.+++.
T Consensus 88 anvqp~SGs~An~a--v~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~-d~~~~~ID~d~l~~~ 164 (399)
T PF00464_consen 88 ANVQPHSGSQANLA--VYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPV-DPDTGLIDYDELEKL 164 (399)
T ss_dssp EE---SSHHHHHHH--HHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHH
T ss_pred EEeecCCchHHHHH--HHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeee-ecCCCeECHHHHHHH
Confidence 44899999999877 677889999999999888777742 1 1 223457888888 777889999999998
Q ss_pred hhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 214 LGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 214 l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
+++..++ +|+...-..|- .-+++++.++|.+.|.+++.|.+.. +|.-++.-. .++.. . =|+..|
T Consensus 165 a~~~kPk--lIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~--~P~~~-----A-Dvvt~s 229 (399)
T PF00464_consen 165 AKEHKPK--LIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP--NPFPY-----A-DVVTGS 229 (399)
T ss_dssp HHHH--S--EEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GCCT-----S-SEEEEE
T ss_pred HhhcCCC--EEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheec--Ccccc-----c-eEEEee
Confidence 8764332 66654433333 5567888999999999999999864 344333111 12211 1 277889
Q ss_pred cccccCccCcceeEEEEeeC
Q 018820 293 YAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 293 ~SK~~gl~G~RvG~l~~v~~ 312 (350)
.-|+| +|=|-|.+. +.
T Consensus 230 ThKtl--~GPrggiI~--~~ 245 (399)
T PF00464_consen 230 THKTL--RGPRGGIIL--TN 245 (399)
T ss_dssp SSGGG---SSS-EEEE--ES
T ss_pred ccccc--cccCceEEE--Ec
Confidence 99997 799999777 66
No 302
>PRK05965 hypothetical protein; Provisional
Probab=98.48 E-value=5.8e-05 Score=75.35 Aligned_cols=160 Identities=17% Similarity=0.172 Sum_probs=95.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh----c-C-CCEEEEcCCCCCChHHH-HHHcCC------------eEEEEEee-c
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH----Y-H-QRTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYY-D 199 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~----~-~-gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~-~ 199 (350)
.+++.+ +++|++|...+..+.... . + ..+|+...-+|.+.... ....|. .+..++.. .
T Consensus 107 ~~~v~f--~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 184 (459)
T PRK05965 107 LNHVYF--TLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYP 184 (459)
T ss_pred cCEEEE--eCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcc
Confidence 467888 999999999876654333 1 2 25688888888776422 111111 01222210 0
Q ss_pred -CCCCCCC--------HHHHHHHhhcCC-CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-C
Q 018820 200 -PATRGLN--------FQGLLEDLGSAP-AGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-S 267 (350)
Q Consensus 200 -~~~~~~d--------~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~ 267 (350)
...+.-| ++.+++.+.... .....+++-.-+.-.|+ .++++-+++|.++|++||+++|+||+..+|. .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt 264 (459)
T PRK05965 185 YRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT 264 (459)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC
Confidence 0001123 246666665432 33445555444555565 4678889999999999999999999999984 3
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
|. .+....+ .-...+++ |+|.++ .|+ -+|.++ +.
T Consensus 265 G~----~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~--~~ 299 (459)
T PRK05965 265 GP----LFACEAE-GVVPDLMT---VAKGLT-SGYVPMGAVL--MS 299 (459)
T ss_pred ch----hhhHhhc-CCCCCeEE---echhhc-cCCcceeEEE--Ec
Confidence 31 1222222 11124443 499998 784 899877 65
No 303
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=2.9e-05 Score=74.53 Aligned_cols=240 Identities=14% Similarity=0.150 Sum_probs=134.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
++..-|||..|.--..-|. ..+.+++...++...--....-|. .+.+.++++.+-..-.. .++|.+ +++
T Consensus 40 ~G~~YlDf~~Giav~~lGH-~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~~---~d~vff--~NS 108 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGH-CHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSPF---ADRVFF--CNS 108 (404)
T ss_pred CCCEeeeeccceeeeccCC-CCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCcc---ccEEEE--cCC
Confidence 4566899887743223332 223333333333321001112232 23455555554322111 689999 999
Q ss_pred chhHHHHHHHHHHHhcC---CCEEEEcCCCCCChHHHHHHcCC-------------eEEEEEeecCCCCCCCHHHHHHHh
Q 018820 151 GTGSLRVGAEFLARHYH---QRTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
|++|+..+..+-..... ..+|+...-+|..-..-.-.++. .++.+|+ =|++++++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence 99999988766554442 23566665565443221111111 1333333 3789999999
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY 293 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 293 (350)
... .+.+++-.-+=--|+.+. ++-++++-++|++||+++|.||+=-++.-.+ +.+....+--. +.+ -++
T Consensus 182 ~~~---taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~gV~-PDI---~tl 251 (404)
T COG4992 182 DED---TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHYGVE-PDI---LTL 251 (404)
T ss_pred ccC---eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHhCCC-CCE---EEe
Confidence 873 335666555666776654 5667899999999999999999988885432 22333332111 133 356
Q ss_pred ccccCccCcceeEEEEeeCChhHHHHHHHHHHHh-hcccccCCChhHHHHHHHHh
Q 018820 294 AKNLGLYGERVGALSIVCKTADVAGRVESQVKLV-IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 294 SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~i~~~~L 347 (350)
.|.+| .|+-||.++ +. + .+.+.+.-- +.++| ..+.++.+++...|
T Consensus 252 aK~Lg-GG~PigA~l--a~-~----~~~~~~~~G~HgSTf-GGNpLacAv~~a~l 297 (404)
T COG4992 252 AKALG-GGFPIGAML--AT-E----EIASAFTPGDHGSTF-GGNPLACAVALAVL 297 (404)
T ss_pred ecccc-CCccceeeE--Ec-h----hhhhcCCCCcccCCC-CcCHHHHHHHHHHH
Confidence 89999 999999977 65 2 222223222 33333 44555555544443
No 304
>PRK07482 hypothetical protein; Provisional
Probab=98.47 E-value=5.8e-05 Score=75.37 Aligned_cols=223 Identities=17% Similarity=0.151 Sum_probs=118.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...||+..|.--..-|. -.++++++..+++. .-...+.+ ..-..+.+..+|+.+... .+ -.-+++.+ +++
T Consensus 48 dG~~ylD~~sg~~~~~lGh-~~p~v~~Av~~q~~-~~~~~~~~--~~~~~~~~~~lAe~L~~~-~p-~~~~~v~f--~~s 119 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGY-GRTEVAEAIAEQAK-ELAYYHTY--VGHGTEASITLSKRIIDR-AP-AGMSKVYY--GLS 119 (461)
T ss_pred CCCEEEEcccchhhhcCCC-CCHHHHHHHHHHHH-hcCccccc--cccCCHHHHHHHHHHHHh-CC-CCcCEEEE--eCc
Confidence 3556899987743222232 12344444444443 11101111 011133444555554322 11 11468888 999
Q ss_pred chhHHHHHHHHHHHh----c-C-CCEEEEcCCCCCChHHH-HHHcCC------------eEEEE--EeecCCC-CC----
Q 018820 151 GTGSLRVGAEFLARH----Y-H-QRTIYIPQPTWGNHPKV-FTLAGL------------SVKSY--RYYDPAT-RG---- 204 (350)
Q Consensus 151 ~~~al~l~~~l~~~~----~-~-gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v--~~~~~~~-~~---- 204 (350)
|++|...+..+.... . + ..+|+...-+|.+.... ....|. .+..+ |++.... .+
T Consensus 120 GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 120 GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence 999998876554322 1 2 35688778888765321 111110 11112 2110000 00
Q ss_pred ----CCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCC-CCCCCCCchHHH
Q 018820 205 ----LNFQGLLEDLGS-APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGF-ASGSLDSDAQSV 277 (350)
Q Consensus 205 ----~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~~~~~~~~~~~ 277 (350)
.+++.+++.+.. .+...+.+++-.-+.-.|+. ++++-+++|.++|++||+++|+||+.-+| ..+. ....
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~----~~a~ 275 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS----MFGS 275 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc----hhhH
Confidence 135667776743 22334455554444444666 67889999999999999999999999999 4442 1222
Q ss_pred HHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
..+ .-...+++ |+|.++ .|+ -+|.++ +.
T Consensus 276 ~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~--~~ 304 (461)
T PRK07482 276 DHY-GIEPDLIT---VAKGLT-SAYAPLSGSI--VG 304 (461)
T ss_pred Hhc-CCCCCEEE---Eccccc-cCccccceee--ec
Confidence 222 11224454 599998 785 788766 55
No 305
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.44 E-value=1.9e-05 Score=76.50 Aligned_cols=218 Identities=20% Similarity=0.230 Sum_probs=134.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+..-||+..|.-.---|.- .|.|.++.+... +.+ ..|..+. ++--.+|+.+... .+. .+.|-+ +++|
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~--~p~V~~Av~~~l-~~G--~~fg~Pt---e~Ei~~Aell~~~-~p~--~e~vrf--vnSG 118 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHA--HPAVVEAVQEQL-ERG--LSFGAPT---ELEVELAELLIER-VPS--IEKVRF--VNSG 118 (432)
T ss_pred CCEeeehhccCcccccCCC--CHHHHHHHHHHH-Hhc--CCCCCCC---HHHHHHHHHHHHh-cCc--ccEEEE--ecch
Confidence 4457888777532233331 233444444433 133 3354432 2333445553322 221 478888 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcC-------------C------eEEEEEeecCCCCCCCHHHHH
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAG-------------L------SVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------------~------~~~~v~~~~~~~~~~d~~~l~ 211 (350)
|+|...+.++-.-....|+|+..+=+|..+...+- .+| + .++.+|| -|++.++
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~ 191 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALE 191 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHH
Confidence 99997766654334456899999999988866543 222 1 2444555 3799999
Q ss_pred HHhhcCCCC-cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 212 EDLGSAPAG-AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 212 ~~l~~~~~~-~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
+++++.+.+ ..+|+=+-+.|=-=+.+.++-++.|-++|+++|.++|+||+--+|...- .-+. ..+--..+ +
T Consensus 192 ~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--gGaq--~~~gi~PD----l 263 (432)
T COG0001 192 EAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--GGAQ--GYYGVEPD----L 263 (432)
T ss_pred HHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--cccc--cccCcCcc----h
Confidence 999887544 4455556667743345678889999999999999999999998877541 1111 11111111 4
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
..|.|.+| .|+-+|.+- +. +++.+++.
T Consensus 264 ttlGKiIG-GGlP~ga~g--Gr-----~eiM~~~~ 290 (432)
T COG0001 264 TTLGKIIG-GGLPIGAFG--GR-----AEIMEQLA 290 (432)
T ss_pred hhhhhhhc-CCcceeeec--cH-----HHHHhhhC
Confidence 56899999 999999644 44 45555443
No 306
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.43 E-value=4.5e-05 Score=75.74 Aligned_cols=160 Identities=19% Similarity=0.187 Sum_probs=91.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----C-CCEEEEcCCCCCChHH-HHHHcC------------CeEEEEEee-c
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----H-QRTIYIPQPTWGNHPK-VFTLAG------------LSVKSYRYY-D 199 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~-gd~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~-~ 199 (350)
.++|.+ +++|++|...+..+..... + ..+|+...-+|.+... .+...| ..+..+|.. +
T Consensus 106 ~~~v~f--~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~ 183 (442)
T PRK13360 106 LNHVFF--TNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLD 183 (442)
T ss_pred CCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCch
Confidence 358888 9999999988765533321 2 2578888888876532 111111 112223321 0
Q ss_pred CC--CCCC--------CHHHHHHHhhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCC-
Q 018820 200 PA--TRGL--------NFQGLLEDLGSA-PAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFA- 266 (350)
Q Consensus 200 ~~--~~~~--------d~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~- 266 (350)
.. .+.. ..+.+++.++.. +.+.+++++-.-+--.|.. ++++-+++|.++|+++|+++|+||+..+|.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Gr 263 (442)
T PRK13360 184 LARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGR 263 (442)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 00 0111 134666666533 2334445544333334554 578889999999999999999999998883
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
.|. ......+ .-...++ +|+|.++ .| +-+|.++ +.
T Consensus 264 tG~----~~a~~~~-gv~PDiv---t~gK~l~-gG~~P~gav~--~~ 299 (442)
T PRK13360 264 LGA----PFAAQYF-GVTPDLL---TCAKGLT-NGAIPMGAVF--VS 299 (442)
T ss_pred Ccc----chhhhhc-CCCCcee---eeeeccc-cCccceEEEE--Ec
Confidence 332 1122111 1112233 7899997 56 6889866 65
No 307
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.42 E-value=0.0001 Score=73.49 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=93.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH-HHHHHcCCe------------EEEEEeecCCC--CC-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP-KVFTLAGLS------------VKSYRYYDPAT--RG- 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~~~~~--~~- 204 (350)
+++.+ +++|++|...+..+........+|+...-+|.... ..+...|.. +..+|..+... +.
T Consensus 131 ~~v~f--~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06082 131 NRVLF--APGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPD 208 (459)
T ss_pred CEEEE--CCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCC
Confidence 58888 99999999887655433333467887777786653 233222211 12222100000 00
Q ss_pred CC------HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 205 LN------FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 205 ~d------~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
.| ++.+++.+.... ..+++++-.-.+--+..++++-+++|.++|++||+++|.||+..+|.-.+ ..+...
T Consensus 209 ~~~~~~~~~~~l~~~i~~~~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e 284 (459)
T PRK06082 209 ADGSDVHYADYLEYVIEKEG-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQ 284 (459)
T ss_pred hhHHHHHHHHHHHHHHhcCC-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhH
Confidence 01 244666665332 34444544334434557888999999999999999999999998873221 111222
Q ss_pred HHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 279 MFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
.+ .-...+++ |+|.++ .| +-+|.++ +.
T Consensus 285 ~~-gv~PDiv~---~gKgl~-gG~~P~~av~--~~ 312 (459)
T PRK06082 285 AY-GIEPDILC---IGKGLG-GGLVPIAAMI--TK 312 (459)
T ss_pred hh-CCCCCEEE---eccccc-CCCCcceEEE--Ec
Confidence 22 11123443 899998 67 4889766 55
No 308
>PRK06062 hypothetical protein; Provisional
Probab=98.42 E-value=7.5e-05 Score=74.38 Aligned_cols=161 Identities=14% Similarity=0.153 Sum_probs=92.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCCe-----------EEEEEeecCCC--CC-
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGLS-----------VKSYRYYDPAT--RG- 204 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~-----------~~~v~~~~~~~--~~- 204 (350)
-++|.+ +++|++|...+..+........+|+...-+|.+... .+...|.. +..++...... +.
T Consensus 112 ~~~v~f--~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (451)
T PRK06062 112 LSKVFF--TNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHA 189 (451)
T ss_pred CCEEEE--cCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCC
Confidence 368888 999999998876553333334678777777766643 22222211 11121100000 10
Q ss_pred -CC-------HHHHHHHhhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 205 -LN-------FQGLLEDLGSA-PAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 205 -~d-------~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
-| ++.+++.++.. +.+..++++-.-+.--|.. ++++-+++|.++|+++|+++|+||+..+|...+ ..
T Consensus 190 ~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~ 266 (451)
T PRK06062 190 TTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KW 266 (451)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HH
Confidence 12 56667777533 2333344443222223544 678899999999999999999999999873221 11
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
+....+.-. ..+ -.|+|.+| .|+ -+|.++ +.
T Consensus 267 ~a~~~~gv~-PDi---~t~gK~lg-gG~~Pigav~--~~ 298 (451)
T PRK06062 267 FAIEHFGVV-PDL---ITFAKGVN-SGYVPLGGVA--IS 298 (451)
T ss_pred HHHHhcCCC-CCe---eeechhhh-cCCcCcEEEE--Ec
Confidence 122222111 233 35799998 785 889866 65
No 309
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.42 E-value=2.5e-05 Score=77.20 Aligned_cols=159 Identities=11% Similarity=0.059 Sum_probs=90.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh-----cCCCEEEEcCCCCCChHH-HHHHcCC-------------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH-----YHQRTIYIPQPTWGNHPK-VFTLAGL-------------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~-----~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~ 200 (350)
.+++.+ +++|++|...+..+.... ....+|+...-+|.+... .+...|- .+..+|....
T Consensus 103 ~~~v~f--~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 103 LECVFL--ADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 368888 999999998876554333 123678888888876432 1211121 1112221000
Q ss_pred C---CC-CCCHHHHHHHhhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 201 A---TR-GLNFQGLLEDLGSAPAGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 201 ~---~~-~~d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
. .+ .-|++.+++.++..+.+..++++-. .+.-.|+ .++++-+++|.++|+++|+++|+||+.-+|...+ + .
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG--~-~ 257 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG--K-L 257 (428)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC--C-e
Confidence 0 00 1256677777765443344444432 1333454 4567999999999999999999999998873221 1 0
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccC-cceeEEE
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALS 308 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~ 308 (350)
.....+ .-...++ .|+|.++ .| +-+|.++
T Consensus 258 fa~~~~-gv~PDi~---t~gK~l~-gG~~p~~av~ 287 (428)
T PRK07986 258 FACEHA-GIAPDIL---CLGKALT-GGTMTLSATL 287 (428)
T ss_pred eeeccc-CCCCCEE---Eechhhh-CCcccCcchh
Confidence 111111 1112344 4899997 77 4777655
No 310
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.41 E-value=7.6e-06 Score=79.42 Aligned_cols=206 Identities=16% Similarity=0.184 Sum_probs=123.2
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCcc--CCcEEEEecCCchhHHHHHHHHHHH-
Q 018820 91 LVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIR--ENRVTTVQCLSGTGSLRVGAEFLAR- 164 (350)
Q Consensus 91 ~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~--~~~v~~~~t~G~~~al~l~~~l~~~- 164 (350)
.+..++.+.+....+.+....+++| ...++-+.+.+| ++|.+..... ...=++ |.||++++..+. +.++
T Consensus 51 ~~~~i~~~~l~~~~n~n~~~~~~~P--~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al-~aAR~ 125 (373)
T PF00282_consen 51 SPASILADLLASALNQNGFTWEASP--AATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYAL-LAARE 125 (373)
T ss_dssp CHHHHHHHHHHHHHT-BTTSTTTSH--HHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHH-HHHHH
T ss_pred cHHHHHHHHHHhhhccccccccccc--ccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHH-HHHHH
Confidence 3455666666666533333333433 455666666676 4555421110 112333 999999996643 2221
Q ss_pred -hc-----CC------CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCC
Q 018820 165 -HY-----HQ------RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACA 229 (350)
Q Consensus 165 -~~-----~g------d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p 229 (350)
.. .| -.|++++-+.......+...|+.++.+|. ++ ++.+|++.|++.+++. ...+.+|+.+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~-~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~G 203 (373)
T PF00282_consen 126 RALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPT-DE-DGRMDIEALEKALEKDIANGKTPFAVVATAG 203 (373)
T ss_dssp HHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-B-BT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS
T ss_pred HHhhhhhhcccccccccccccccccccHHHHhcceeeeEEEEecC-Cc-chhhhHHHhhhhhcccccccccceeeeccCC
Confidence 10 11 25677776666678889999999999999 65 4679999999887652 223556666777
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC--CCCCCCCCchHHHHHHhh--cCCcEEEEeccccccCccCccee
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG--FASGSLDSDAQSVRMFVA--DGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~--~~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
.-.||.+ +.+++|+++|+++++|+-+|-+|.+ +.... .+.+.. ....-| .-++-|.++ .-+.+|
T Consensus 204 tt~~Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~-------~~~~~~gi~~adSi-t~d~HK~l~-~P~~~~ 271 (373)
T PF00282_consen 204 TTNTGAI---DPLEEIADICEKYNIWLHVDAAYGGSALLSPE-------YRHLLFGIERADSI-TIDPHKWLG-VPYGCG 271 (373)
T ss_dssp -TTTSBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT-------TGGGGTTGGGESEE-EEETTTTTS--SSS-E
T ss_pred Ccccccc---cCHHHHhhhccccceeeeeccccccccccccc-------cccccccccccccc-ccchhhhhc-CCccce
Confidence 7788866 6778899999999999999999999 33221 111111 111233 346899887 778999
Q ss_pred EEEEeeCChhHH
Q 018820 306 ALSIVCKTADVA 317 (350)
Q Consensus 306 ~l~~v~~~~~~~ 317 (350)
++. ..++..+
T Consensus 272 ~~l--~r~~~~l 281 (373)
T PF00282_consen 272 VLL--VRDKSDL 281 (373)
T ss_dssp EEE--ESSGGGH
T ss_pred eEE--eecccch
Confidence 877 7776544
No 311
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.41 E-value=9.5e-06 Score=80.82 Aligned_cols=213 Identities=15% Similarity=0.094 Sum_probs=118.3
Q ss_pred cccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC---CCCc---HH----HHHHHHHH
Q 018820 60 ILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP---IVGL---AE----FNKLSAKL 129 (350)
Q Consensus 60 i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p---~~G~---~~----lr~aia~~ 129 (350)
++.+..+..+ ...+.|+|-..++.. .+.+++++.....+. ....|+. ..|. .. .|+.++++
T Consensus 22 ~~~~~~~~~~-~~~~~l~l~~sen~~-------s~~v~~~~~~~l~~~-y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l 92 (452)
T PTZ00094 22 LYELIEKEKE-RQIEGLELIASENFT-------SRAVLECLGSCFTNK-YAEGLPGNRYYGGNEVVDKIENLCQKRALEA 92 (452)
T ss_pred HHHHHHHHHH-HHHcCeeEecccccC-------CHHHHHHhcchhhcc-ccCCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 4444443222 235689999987732 445555555443111 0001111 1231 11 23344444
Q ss_pred HhCCCCCCccCCcEEE-EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH----------cCCeEEEEEee
Q 018820 130 ILGADSPAIRENRVTT-VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL----------AGLSVKSYRYY 198 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~-~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----------~G~~~~~v~~~ 198 (350)
++.+ ++++.+ ++..||+++... .+.+++.+||+|++....+..+...+.. .++++..++.
T Consensus 93 -f~a~-----~~~~~~~~~~~sgt~an~~--v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~- 163 (452)
T PTZ00094 93 -FGLD-----PEEWGVNVQPYSGSPANFA--VYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV- 163 (452)
T ss_pred -hCCC-----cccceeecCCCchHHHHHH--HHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeeccc-
Confidence 4543 455544 345789988877 3456678999999977666555433211 1133444444
Q ss_pred cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSV 277 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~ 277 (350)
+.+ +.+|.+.+++.++....+ ++++. ++.+|...+. ++|.++|+++|+++++|.+..- ....+... .+
T Consensus 164 ~~~-g~id~~~L~~~l~~~~~~--lvi~~--~s~~g~~~di---~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~--~~- 232 (452)
T PTZ00094 164 NEK-GLIDYDKLEELAKAFRPK--LIIAG--ASAYPRDIDY---KRFREICDSVGAYLMADIAHTSGLVAAGVLP--SP- 232 (452)
T ss_pred CCC-CCcCHHHHHHHHHHhCCC--EEEEe--CCCCCCccCH---HHHHHHHHHcCCEEEEeccchhccccCCCCC--CC-
Confidence 433 679999999999653222 44443 3458887775 4567779999999999998643 22221100 01
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+ .+ --+++.|+.|+++ |-+-|++.
T Consensus 233 --~--~~-~D~l~~S~hK~l~--GP~Gg~l~ 256 (452)
T PTZ00094 233 --F--PY-ADVVTTTTHKSLR--GPRSGLIF 256 (452)
T ss_pred --C--CC-CcEEEcCCccCCC--CCCceEEE
Confidence 1 11 2367899999873 44447666
No 312
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.39 E-value=9.2e-05 Score=73.77 Aligned_cols=159 Identities=9% Similarity=0.078 Sum_probs=94.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh-----cC-CCEEEEcCCCCCChH-HHHHHcCC------------eEEEEEeecCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH-----YH-QRTIYIPQPTWGNHP-KVFTLAGL------------SVKSYRYYDPA 201 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~-----~~-gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~~~~ 201 (350)
+++.+ +++|++|...+..+.... .+ ..+|+...-+|.... ..+...|- .+..+|..+..
T Consensus 115 ~~v~f--~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 115 GHAFF--ASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CEEEE--eCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 57888 999999998876553221 12 357888888886643 22221111 12222221100
Q ss_pred C--CC--------CCHHHHHHHhhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CC
Q 018820 202 T--RG--------LNFQGLLEDLGSAPAGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SG 268 (350)
Q Consensus 202 ~--~~--------~d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~ 268 (350)
. +. -+++.+++.+...+.+...+++-. .+.-.|. .++++-++++.++|++||+++|+||+..+|. .|
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG 272 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG 272 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc
Confidence 0 00 124666666754444444555443 2455566 5689999999999999999999999999983 33
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
. .+....+ .-...+++ |+|.++ .| +-+|.++ +.
T Consensus 273 ~----~fa~~~~-gv~PDivt---~gKgl~-gG~~Pi~av~--~~ 306 (453)
T PRK06943 273 T----FFACEQA-GVWPDFLC---LSKGIS-GGYLPLSLVL--SR 306 (453)
T ss_pred c----hhHHHhC-CCCCCeEe---eehhhc-cCcccceEEE--Ec
Confidence 1 1222222 11234454 499998 78 5899876 65
No 313
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.38 E-value=8.6e-05 Score=73.46 Aligned_cols=158 Identities=14% Similarity=0.098 Sum_probs=91.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChH-HHHHHcCC-------------eEEEEEeec
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHP-KVFTLAGL-------------SVKSYRYYD 199 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~-~~~~~~G~-------------~~~~v~~~~ 199 (350)
.++|.+ +++|++|...+..+..... +| .+|+...-+|.+.. ..+...|- .+..+|. .
T Consensus 104 ~~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~-p 180 (429)
T PRK06173 104 LNKIFF--ADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQ-P 180 (429)
T ss_pred cCEEEE--eCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCC-C
Confidence 468888 9999999988765533321 33 56887888887642 11111110 0122222 0
Q ss_pred CCCCC-----CCHHHHHHHhhcCCCCcEEEEecCC-CCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 200 PATRG-----LNFQGLLEDLGSAPAGAIVLLHACA-HNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 200 ~~~~~-----~d~~~l~~~l~~~~~~~~~l~~~~p-~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
...+. -+++.+++.++..+.+.+.+++--- +.-.|.. ++++-+++|.++|++||+++|+||+..+|...+
T Consensus 181 ~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG--- 257 (429)
T PRK06173 181 SIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG--- 257 (429)
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---
Confidence 00000 1356677777644444455554431 5555665 789999999999999999999999998874322
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEE
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALS 308 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~ 308 (350)
..+....+ .-...+++ |+|.++ .|+ =++.++
T Consensus 258 ~~~a~~~~-gv~PDiv~---~gK~l~-gG~~p~~a~~ 289 (429)
T PRK06173 258 KLFALEHA-GVVPDIMC---IGKALT-GGYLTLSATI 289 (429)
T ss_pred cchHHHhc-CCCCCEEE---eehhhh-CCccccceEE
Confidence 11122222 11123443 899997 774 567655
No 314
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.36 E-value=0.00017 Score=72.18 Aligned_cols=160 Identities=11% Similarity=0.104 Sum_probs=94.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh----c-C-CCEEEEcCCCCCChHH-HHHHcCC------------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH----Y-H-QRTIYIPQPTWGNHPK-VFTLAGL------------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~----~-~-gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~ 200 (350)
.++|.+ +++|++|...+..+.... . + ..+|+...-+|.+... .+...|. .+..+|+.+.
T Consensus 107 ~~~v~f--~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~ 184 (466)
T PRK07030 107 LSRCFY--ADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC 184 (466)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc
Confidence 468888 999999998876553222 1 2 3567777878866532 2222221 1222332110
Q ss_pred C--CCCC--------CHHHHHHHhhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-C
Q 018820 201 A--TRGL--------NFQGLLEDLGSAPAGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-S 267 (350)
Q Consensus 201 ~--~~~~--------d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~ 267 (350)
. ..+. +++.+++.+...+.....+++-. -+.-.|. .++++-+++|.++|++||+++|+||+.-+|. .
T Consensus 185 ~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRt 264 (466)
T PRK07030 185 YLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRT 264 (466)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcc
Confidence 0 0011 24556666654444444555442 1344455 5678899999999999999999999999884 3
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
+. .+....+ .-...+++ |+|.++ .| +-+|.++ +.
T Consensus 265 G~----~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~--~~ 299 (466)
T PRK07030 265 GT----MFACEQA-GIRPDFLC---LSKALT-GGYLPLAAVL--TT 299 (466)
T ss_pred cc----chHHHhc-CCCCCEEe---eehhcc-CCcccceEEE--ec
Confidence 31 1222222 11224444 499998 78 4899866 55
No 315
>PRK07678 aminotransferase; Validated
Probab=98.36 E-value=0.00018 Score=71.65 Aligned_cols=159 Identities=11% Similarity=0.078 Sum_probs=90.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPA 201 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~ 201 (350)
+++.+ +++|++|...+..+..... +| .+|+...-+|.+.... +...|. .+..+|..+..
T Consensus 106 ~~v~f--~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (451)
T PRK07678 106 YVIFF--SNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCY 183 (451)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccc
Confidence 47888 9999999988765543321 23 5688777777765432 222111 11222220000
Q ss_pred C--CC-----CC---HHHHHHHhh-cCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CC
Q 018820 202 T--RG-----LN---FQGLLEDLG-SAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SG 268 (350)
Q Consensus 202 ~--~~-----~d---~~~l~~~l~-~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~ 268 (350)
. ++ .| ++.+++.++ ..+...+.+++-.-+.--|.. ++++-++++.++|++||+++|+||+.-+|. .|
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (451)
T PRK07678 184 RMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG 263 (451)
T ss_pred cccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc
Confidence 0 00 01 223455554 223334455544333234554 678899999999999999999999998884 33
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
. .+....+ .-...++ .|+|.+| .| +-+|.++ +.
T Consensus 264 ~----~~~~~~~-gv~PDiv---t~gK~lg-gG~~Pi~av~--~~ 297 (451)
T PRK07678 264 K----AFGFMNY-GVKPDII---TMAKGIT-SAYLPLSATA--VK 297 (451)
T ss_pred h----hHHHHhc-CCCCCEE---Eeecccc-cCCcceeEEE--Ec
Confidence 1 1222222 1112344 5699998 67 6899766 55
No 316
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.36 E-value=6.9e-05 Score=74.19 Aligned_cols=148 Identities=20% Similarity=0.281 Sum_probs=87.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEc-CCCCCChHHHHH-----HcCCe------EEEEEeecCCCCCCCH
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIP-QPTWGNHPKVFT-----LAGLS------VKSYRYYDPATRGLNF 207 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~-~P~y~~~~~~~~-----~~G~~------~~~v~~~~~~~~~~d~ 207 (350)
+++.+ +++|++|...+..+- +...| ..|+.. .-.|..+..... ..|.. +..+++ -|+
T Consensus 105 ~~v~f--~~sGseA~e~AlklA-r~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~d~ 174 (431)
T PRK06209 105 DMVKF--CKNGSDATSAAVRLA-RAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY-------NDI 174 (431)
T ss_pred ceEEE--ecCHHHHHHHHHHHH-HHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC-------CCH
Confidence 57888 999999998876653 33344 345443 222211110000 00110 111111 278
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++.++....+..++++ -|- .|...+.+.+++|.++|++||+++|+||+..+|.... ........-...
T Consensus 175 ~~l~~~l~~~~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~PD- 245 (431)
T PRK06209 175 ASLEALFEDHPGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVPD- 245 (431)
T ss_pred HHHHHHHHhCCCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCcc-
Confidence 8899888654333334443 342 4567889999999999999999999999988775421 111111111112
Q ss_pred EEEeccccccCccCcceeEEEEeeC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+..|+|.+| .|+-+|+++ +.
T Consensus 246 --i~t~gK~lg-gG~p~~av~--~~ 265 (431)
T PRK06209 246 --LSCFGKALG-NGFAVSALA--GK 265 (431)
T ss_pred --eeeehhhhc-CCcccEEEE--EH
Confidence 356799998 789899876 65
No 317
>PRK07046 aminotransferase; Validated
Probab=98.36 E-value=0.00015 Score=72.24 Aligned_cols=148 Identities=16% Similarity=0.156 Sum_probs=90.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHH--c----------CC------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTL--A----------GL------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~--~----------G~------~~~~v~~~~~ 200 (350)
.++|.+ +++|++|...+..+-......++|+...-+|.+... .+.. . |. .+..+|+
T Consensus 130 ~~~v~F--~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 204 (453)
T PRK07046 130 LPYWQV--ATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF--- 204 (453)
T ss_pred CCEEEE--ECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC---
Confidence 468888 999999998876654333344678887878877632 1111 0 11 0111121
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLH-ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~-~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
-|++.+++.+.. .+...+++ +-..|---..++++-++++.++|+++|+++|+||+.. |..+- .- ....
T Consensus 205 ----nd~~~l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~--Gg--~~~~ 273 (453)
T PRK07046 205 ----NDLAALEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGP--GG--YTRA 273 (453)
T ss_pred ----CCHHHHHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCC--cc--hhHH
Confidence 278888888843 22334443 3333332245667889999999999999999999976 43321 01 1111
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+ .-...++ .|+|.+| .|+-+|.++
T Consensus 274 ~-gv~PDi~---t~gK~lg-gG~Pi~av~ 297 (453)
T PRK07046 274 H-GLEPDFL---VVGKPIA-GGVPCAVYG 297 (453)
T ss_pred h-CCCccce---eehhhhc-CCCcceeee
Confidence 1 1112333 4799998 899999765
No 318
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.35 E-value=0.0001 Score=73.58 Aligned_cols=160 Identities=11% Similarity=0.092 Sum_probs=94.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHH-HHHHcCC------------eEEEEEeecCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPK-VFTLAGL------------SVKSYRYYDPA 201 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~ 201 (350)
+++.+ +++|++|...+..+.... .+| .+|+...-+|.+... .+...|. .+..+|+.+..
T Consensus 117 ~~v~f--~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~ 194 (460)
T PRK06916 117 KKVFY--SDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTY 194 (460)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccc
Confidence 58888 999999998876553322 233 678888888876432 2222221 12222220000
Q ss_pred --CCC--------CCHHHHHHHhhcCCCCcEEEEecC-CCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC
Q 018820 202 --TRG--------LNFQGLLEDLGSAPAGAIVLLHAC-AHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS 269 (350)
Q Consensus 202 --~~~--------~d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~ 269 (350)
.++ -+++.+++.++..+.....+++-. .+.-.|.. ++++-++++.++|+++|+++|.||+.-+|.-.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG 274 (460)
T PRK06916 195 RSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG 274 (460)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc
Confidence 001 134566666664444444555443 24555665 689999999999999999999999998883221
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
..+....+ .-...++ .|+|.++ .| +-+|.++ +.
T Consensus 275 ---~~~a~~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~--~~ 308 (460)
T PRK06916 275 ---KMFACEHE-NVTPDIM---TAGKGLT-GGYLPIAITV--TT 308 (460)
T ss_pred ---hhhHHHhc-CCCCCee---eeehhhh-cCccccceee--ec
Confidence 11222222 1112344 4699998 78 4899766 55
No 319
>PRK12403 putative aminotransferase; Provisional
Probab=98.35 E-value=0.00017 Score=71.98 Aligned_cols=160 Identities=17% Similarity=0.138 Sum_probs=87.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh-----cCCCE-EEEcCCCCCChHH-HHHHcCCe-----------EEEEEeec--C
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH-----YHQRT-IYIPQPTWGNHPK-VFTLAGLS-----------VKSYRYYD--P 200 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~-----~~gd~-Vlv~~P~y~~~~~-~~~~~G~~-----------~~~v~~~~--~ 200 (350)
+++.+ +++|++|...+..+.... .+++. |+...-+|..... .+...|.+ +..+|... .
T Consensus 116 ~~v~f--~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~ 193 (460)
T PRK12403 116 SHAIY--TNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYA 193 (460)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccc
Confidence 67888 999999998876654333 23333 4444556655422 22222211 22222100 0
Q ss_pred CCCCCC--------HHHHHHHhhc-CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 201 ATRGLN--------FQGLLEDLGS-APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 201 ~~~~~d--------~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
..+... .+.+++.+.. .+...+++++-.-..--|. .++++-+++|.++|++||+++|.||+..+|.--+
T Consensus 194 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG- 272 (460)
T PRK12403 194 NGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG- 272 (460)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-
Confidence 000111 2445555533 2233334444333333354 4578889999999999999999999998883221
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
+ -+....+ .-...+++ |+|.++ .|+ -+|.++ +.
T Consensus 273 -~-~~a~e~~-gv~PDiv~---~gK~lg-gG~~Piga~v--~~ 306 (460)
T PRK12403 273 -E-WFAHEHF-GFEPDTLS---IAKGLT-SGYVPMGGLV--LS 306 (460)
T ss_pred -h-hhhhhhc-CCCCCeEE---Eccccc-ccccceEEEE--EC
Confidence 1 1121122 11124443 899998 785 899766 65
No 320
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.35 E-value=1.6e-05 Score=72.84 Aligned_cols=155 Identities=17% Similarity=0.311 Sum_probs=106.2
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEE-EcCCCCCChHHH----------H
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIY-IPQPTWGNHPKV----------F 185 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vl-v~~P~y~~~~~~----------~ 185 (350)
-|...|-+..|+- +|. +.-++=.|..+||+|+.. .++..++|||+.+ +..--|.....+ +
T Consensus 65 ~GRdtLe~vyA~v-f~a------E~a~VRpq~isGTHAI~~--aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 65 LGRDTLERVYAQV-FGA------EAALVRPQIISGTHAIAC--ALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred cchhHHHHHHHHH-hcc------ccceeeeeeecchhHHHH--HHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 3555555555554 555 333444667889999988 6678899999875 444446666665 3
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC----CCHHHHHHHHHHHHh--cCcEEEEc
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD----PTLQQWERIRQLMRS--KGLLPFFD 259 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~----~s~~~~~~i~~~~~~--~~~~ii~D 259 (350)
+..|+..+.+|+ .++ ..+|.+.++..+..+++ ++.+ +--+|.. ++.+++++++++.|+ .++++++|
T Consensus 136 ~dfgi~Y~~v~L-t~~-gkiD~~~v~~~i~~~tk---li~I---QRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 136 KDFGIKYKAVPL-TAD-GKIDIQAVKTAISDRTK---LIGI---QRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred HHhCcceeeccc-ccC-CcccHHHHHHhcCccce---EEEE---EeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 567788888888 443 46999999999987665 4444 3444443 578899999999987 57999999
Q ss_pred cCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 260 SAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 260 eaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+||.+|...- . + ... + -=+..+|+-||-|
T Consensus 208 NCYGEFvE~~---E--P-t~v---G-aDliAGSLIKNpG 236 (416)
T COG4100 208 NCYGEFVEEK---E--P-THV---G-ADLIAGSLIKNPG 236 (416)
T ss_pred ccchhhhhcc---C--c-ccc---c-hhhhccceeeCCC
Confidence 9999998541 1 1 111 1 1245788888876
No 321
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.35 E-value=1.4e-05 Score=82.69 Aligned_cols=177 Identities=15% Similarity=0.093 Sum_probs=110.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-HHHHcCCeEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-VFTLAGLSVK 193 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~~~ 193 (350)
...|...=-|..|..+||.+ .-..+ ++|+|.++.. .+++.+.+||.|++..-+.-.... .+.+.|++++
T Consensus 171 ~~eG~i~eAq~~AA~~fgAd------~tyFl--vNGTS~gn~a--~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 171 IHEGAAKDAQKHAAKVFNAD------KTYFV--LNGTSASNKV--VTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CCChHHHHHHHHHHHHhCCC------ceEEE--eCChhHHHHH--HHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 34554443444445567863 34555 9999999988 567789999999999987654444 3667999998
Q ss_pred EEEe-ecCCC--CCCCHH-----HHHHHhhcC-CC-----C-cEEEEecCCCCCCCCCCCHHHHHHHHHH-HHhcCcEEE
Q 018820 194 SYRY-YDPAT--RGLNFQ-----GLLEDLGSA-PA-----G-AIVLLHACAHNPTGVDPTLQQWERIRQL-MRSKGLLPF 257 (350)
Q Consensus 194 ~v~~-~~~~~--~~~d~~-----~l~~~l~~~-~~-----~-~~~l~~~~p~NPTG~~~s~~~~~~i~~~-~~~~~~~ii 257 (350)
++.- +++-+ .+++.+ .+++.+++. +. + ..++++.+| +=-|++++. ++|++. ++.++ .|+
T Consensus 241 Yl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi---~~I~~~~~h~~~-~ll 315 (720)
T PRK13578 241 YLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNA---RQVVDKIGHLCD-YIL 315 (720)
T ss_pred EeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecH---HHHHHHhhccCC-cEE
Confidence 8753 22211 234544 488888765 22 1 245555442 345888876 555676 56777 889
Q ss_pred EccCCCCCC-CCCCCCchHHHH-HHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 258 FDSAYQGFA-SGSLDSDAQSVR-MFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 258 ~DeaY~~~~-~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+||||..+. +.+.-++.+... ....++.-+++++|.-|.+ +++--+.++
T Consensus 316 vDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~L 366 (720)
T PRK13578 316 FDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQI 366 (720)
T ss_pred EeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhh
Confidence 999998743 322101112111 1111233589999999986 678777544
No 322
>PLN02590 probable tyrosine decarboxylase
Probab=98.33 E-value=7.5e-05 Score=75.59 Aligned_cols=207 Identities=14% Similarity=0.147 Sum_probs=130.2
Q ss_pred ccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCcc--CCcEEEEecCCchhHHHHHHHHHHHhc
Q 018820 92 VLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIR--ENRVTTVQCLSGTGSLRVGAEFLARHY 166 (350)
Q Consensus 92 ~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~--~~~v~~~~t~G~~~al~l~~~l~~~~~ 166 (350)
+...+-+.+....+.. ...|....+..++-+.+.+| ++|.+..... ...-++ +.||++|...+. ..++-.
T Consensus 143 ~~~~lgd~l~sa~n~~--~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al-~aAR~~ 217 (539)
T PLN02590 143 VAGFLGEMLNAGLSVV--GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVV-LAARDR 217 (539)
T ss_pred HHHHHHHHHHHhcccc--cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHH-HHHHHH
Confidence 3445555555544222 23344445667788888888 3443211000 022334 899999885542 223221
Q ss_pred ----------CCCEEEEcCCCCCChHHHHHHcCC---eEEEEEeecC-CCCCCCHHHHHHHhhcC---CCCcEEEEecCC
Q 018820 167 ----------HQRTIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDP-ATRGLNFQGLLEDLGSA---PAGAIVLLHACA 229 (350)
Q Consensus 167 ----------~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~-~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p 229 (350)
+.-+|++++-+.......++..|+ .++.||. +. +++.+|++.|++.+++. ...+++|+-+..
T Consensus 218 ~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~-d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaG 296 (539)
T PLN02590 218 ILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKT-DSSTNYGMPPESLEEAISHDLAKGFIPFFICATVG 296 (539)
T ss_pred HHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeC-CCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 223567777777777888888888 5888888 64 35789999999998652 334667776667
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc--CCcEEEEeccccccCccCcceeEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD--GGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
.-.||.+ +.+++|+++|++|++|+-+|-||.++..-. +..+.+... ...-| .-.+-|.+. ..+-+|.+
T Consensus 297 TT~tGai---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~-----~~~r~~~~Gie~ADSi-t~D~HK~l~-~p~~cg~l 366 (539)
T PLN02590 297 TTSSAAV---DPLVPLGNIAKKYGIWLHVDAAYAGNACIC-----PEYRKFIDGIENADSF-NMNAHKWLF-ANQTCSPL 366 (539)
T ss_pred CCCCccc---CCHHHHHHHHHHhCCeEEEecchhhhhhcC-----hhhHHHhcCCccCCEE-EECchhhcC-cCcCEEEE
Confidence 7778765 456788999999999999999999976421 223333221 11233 446789765 78888987
Q ss_pred EEeeCChhH
Q 018820 308 SIVCKTADV 316 (350)
Q Consensus 308 ~~v~~~~~~ 316 (350)
. +.++..
T Consensus 367 l--vr~~~~ 373 (539)
T PLN02590 367 W--VKDRYS 373 (539)
T ss_pred E--ecCHHH
Confidence 7 777643
No 323
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.31 E-value=4.4e-05 Score=81.11 Aligned_cols=206 Identities=18% Similarity=0.215 Sum_probs=125.6
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHH---HhCCCCCCccCCcEEEEe
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI---VGLAEFNKLSAKL---ILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~---~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~ 147 (350)
+...++.|.+ +- ...+.+........ +-...+-|.|. +|..++...+.+| +.|-+ + +.+|
T Consensus 486 ~~~fi~lGsc-tm----k~na~v~~l~~s~~-ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd-------~-~Sl~ 551 (939)
T TIGR00461 486 NNSMIPLGSC-TM----KLNATAEMMPITWP-EFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFD-------A-ISLQ 551 (939)
T ss_pred cccCCCCccC-CC----ccCHHHHHHHhcch-hhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCC-------C-cccC
Confidence 3466778888 32 22333333312211 11124556664 5655555555555 34543 2 2345
Q ss_pred cCCchhHHHHHHHHHHH-h-----cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc
Q 018820 148 CLSGTGSLRVGAEFLAR-H-----YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~-~-----~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 221 (350)
.+||..+-..+...... . ...++|+++.-........++..|++++.++. ++ ++.+|++.|++.+.+...+.
T Consensus 552 p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~-d~-~G~iDle~L~~~i~~~~~~t 629 (939)
T TIGR00461 552 PNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNC-DQ-DGNIDLVDLKNKAEQHGDEL 629 (939)
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEecc-CC-CCCcCHHHHHHHHhhcCCce
Confidence 66666655432111111 1 12367889887776667778899999999998 64 45799999999997643456
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEeccccccC--
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG-- 298 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-- 298 (350)
++|++++|+| +|..-+ .+++|+++|+++|.+++.|-++.. +.- + . .+. +.+.. +++.|.-|.|+
T Consensus 630 aaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al~~--l-~---~Pg---~~GaD-i~~~s~HKtf~~P 696 (939)
T TIGR00461 630 AAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQVG--L-T---SPG---DLGAD-VCHLNLHKTFCIP 696 (939)
T ss_pred EEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhCCC--C-C---Ccc---ccCCC-EEEecCCccCCCC
Confidence 6888899999 887653 378889999999999999988743 221 1 0 111 11223 44566777664
Q ss_pred --ccCcceeEEE
Q 018820 299 --LYGERVGALS 308 (350)
Q Consensus 299 --l~G~RvG~l~ 308 (350)
..|=.+|++.
T Consensus 697 ~G~GGPg~G~i~ 708 (939)
T TIGR00461 697 HGGGGPGMGPIG 708 (939)
T ss_pred CCCCCCCeEEEE
Confidence 4566788776
No 324
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.30 E-value=1.5e-05 Score=79.60 Aligned_cols=190 Identities=19% Similarity=0.158 Sum_probs=123.0
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
..|...=-|..|...+|.+ ....+ ++|.+.|+.. ..++.+.+||.|+++..+.-.....+-++|+.++++
T Consensus 68 p~G~i~eAqe~aA~~fgAd------~tyFv--vNGTS~ank~--vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 68 PEGPIKEAQELAARVFGAD------HTYFV--VNGTSTANKA--VINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYL 137 (557)
T ss_pred CCccHHHHHHHHHHHhCCC------ceEEE--ECCccHHHHH--HHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEe
Confidence 3444333334444457763 34555 9999999988 567889999999999999776666677899988876
Q ss_pred Ee-ecCC-C--CCCCHHHHHHHhhcCCCCcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC
Q 018820 196 RY-YDPA-T--RGLNFQGLLEDLGSAPAGAIVLLHACAHNPT--GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS 269 (350)
Q Consensus 196 ~~-~~~~-~--~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~ 269 (350)
.- .++. + .+++.+.+.+++.+.+...+++++ .||| |++++. ++|++++...++|+..|++..-.. +.
T Consensus 138 ~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n~---~~i~~~~~~~~a~v~~deah~~~~-~~ 210 (557)
T COG1982 138 EPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYNL---RKIVELLHHYGAWVLYDEAHPAHF-DF 210 (557)
T ss_pred cCCCCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeecH---HHHHHHHhhcCceEEhhhcCcccc-cc
Confidence 43 3442 2 678999999998887665234444 5666 777775 556788888999999999764432 11
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC-hhHHHHHHHHHHHhh
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT-ADVAGRVESQVKLVI 328 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~-~~~~~~~~~~l~~~~ 328 (350)
.+..+. .......+++.+|.-|.+ +++.-+-.+-+..+ .-..+++.+.+....
T Consensus 211 --~~~l~~--~~~~~~~~~~tqS~HK~l--~alSQaS~iHv~~~~~~~~~r~nea~~~h~ 264 (557)
T COG1982 211 --SPMLPE--SALNGGADFVTQSTHKLL--AALSQASMIHVKDGRAVNHERFNEALMMHQ 264 (557)
T ss_pred --cccCcc--hhhhcCceEEEechhhhh--hhhhhhHHHhhCCCccCCHHHHHHHHHHHc
Confidence 111111 122345799999999986 56666644322221 112355555554433
No 325
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.30 E-value=0.00024 Score=71.65 Aligned_cols=230 Identities=17% Similarity=0.132 Sum_probs=120.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI-VGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~-~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...||+..|.-...-| .-.+.+++++.+++. .. .+ +... .+..+....+++.+...- .+..-+++.+ ++
T Consensus 87 dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~--~~-~~-~~~~~~~~~~~~~~lae~L~~~~-~~~~~~~v~f--~~ 158 (504)
T PLN02760 87 NGKKYLDALAGLWCTALG-GSEPRLVAAATEQLN--KL-PF-YHSFWNRTTKPSLDLAKELLEMF-TARKMGKVFF--TN 158 (504)
T ss_pred CCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHh--hc-cc-eecccccCcHHHHHHHHHHHhhc-CCCCCCEEEE--eC
Confidence 356689998874212333 222444555445444 11 11 1111 223445555666643321 1111357888 99
Q ss_pred CchhHHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHH-HHHHcCCe------------EEEEEeecCCC---CCCC-
Q 018820 150 SGTGSLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPK-VFTLAGLS------------VKSYRYYDPAT---RGLN- 206 (350)
Q Consensus 150 G~~~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~~---~~~d- 206 (350)
+|++|...+..+.... .++ ..|+..+-+|..... .+...|.. +..+++.+... ...+
T Consensus 159 SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 238 (504)
T PLN02760 159 SGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETE 238 (504)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcH
Confidence 9999998876554322 123 578888888876632 22222221 11111100000 0001
Q ss_pred -------HHHHHHHhhc-CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCC-CCCCCCCchHH
Q 018820 207 -------FQGLLEDLGS-APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGF-ASGSLDSDAQS 276 (350)
Q Consensus 207 -------~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~~~~~~~~~~ 276 (350)
.+.+++.+.. .+...+++++-.-..--|. .++++-+++|.++|++||+++|+||+.-+| ..|. ...
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~----~~a 314 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT----MFG 314 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch----hhH
Confidence 2345555542 2233445554333333354 457889999999999999999999999888 4442 122
Q ss_pred HHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHH
Q 018820 277 VRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 277 ~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
...+.-. .. +-.|+|.+| .| +-+|.++ +. +++.+.+
T Consensus 315 ~e~~gv~-PD---ivtlgK~lg-gG~~PigAv~--~~-----~~i~d~~ 351 (504)
T PLN02760 315 CDKYNIK-PD---LVSLAKALS-SAYMPIGAVL--VS-----PEISDVI 351 (504)
T ss_pred HHhcCCC-Cc---EEEeccccc-CCccccceEe--ec-----HHHHhhh
Confidence 2222111 12 456799998 66 4899866 55 4455444
No 326
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.29 E-value=0.00019 Score=71.01 Aligned_cols=156 Identities=10% Similarity=0.042 Sum_probs=89.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHH-HHHHcCCe-------------EEEEEeecC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPK-VFTLAGLS-------------VKSYRYYDP 200 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~~-------------~~~v~~~~~ 200 (350)
+++.+ +++|++|...+..+..... +| .+|+...-+|..... .+...|-. +..++. ..
T Consensus 106 ~~v~f--~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~ 182 (427)
T TIGR00508 106 DCVFL--ADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQ 182 (427)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CC
Confidence 68888 9999999987655433221 23 568888888876532 22222211 111111 00
Q ss_pred CCCC-----CCHHHHHHHhhcCCCCcEEEEecCC--CCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 201 ATRG-----LNFQGLLEDLGSAPAGAIVLLHACA--HNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 201 ~~~~-----~d~~~l~~~l~~~~~~~~~l~~~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
..+. -|++.+++.+.....+..+|++ .| .+--|. .++.+.+++|.++|+++|+++|+||++.+|...+ +
T Consensus 183 ~~~~~~~~~~~~~~l~~~l~~~~~~vaaviv-EPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G--~ 259 (427)
T TIGR00508 183 NRFDEEWNEEAITPLAKLMELHSDEIAAVIL-EPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG--K 259 (427)
T ss_pred ccccchhHHHHHHHHHHHHHhcCCcEEEEEE-echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC--c
Confidence 0011 1456677777544333334443 34 444454 4579999999999999999999999997774322 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEE
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALS 308 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~ 308 (350)
. +....+ .-...+++ ++|.++ .|+ =++.++
T Consensus 260 ~-~~~~~~-~v~pDi~~---~gK~l~-gG~~p~~a~~ 290 (427)
T TIGR00508 260 L-FACEHA-GVVPDILC---VGKALT-GGYMTLSATV 290 (427)
T ss_pred c-chhhhc-CCCCCEEE---echhhh-cCcccceEEE
Confidence 1 122122 11223443 799996 775 466544
No 327
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.29 E-value=0.00019 Score=71.39 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=91.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----C-CCEEEEcCCCCCChHHH-HHHcC------------CeEEEEEee--
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----H-QRTIYIPQPTWGNHPKV-FTLAG------------LSVKSYRYY-- 198 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~-gd~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~-- 198 (350)
.++|.+ +++|++|...+..+..... + ..+|+...-+|.+.... +...| ..+..+|+.
T Consensus 109 ~~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (445)
T PRK09221 109 LDHVFF--TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLD 186 (445)
T ss_pred CCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcc
Confidence 368888 9999999988765543331 1 25688777788665321 11111 012222220
Q ss_pred -cCCCCCC--------CHHHHHHHhhcCC-CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCC-
Q 018820 199 -DPATRGL--------NFQGLLEDLGSAP-AGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFA- 266 (350)
Q Consensus 199 -~~~~~~~--------d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~- 266 (350)
....+.. ..+.+++.++... .+..++++-.-..-.|.. ++++-+++|.++|+++|+++|+||+..+|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GR 266 (445)
T PRK09221 187 LPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGR 266 (445)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCc
Confidence 0000111 1346666665432 334455544444445664 567889999999999999999999998874
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
.|. .+....+.-. .. +-.|+|.++ .| +-+|.++ +.
T Consensus 267 tG~----~~~~~~~gv~-PD---i~~~gK~l~-gG~~Pi~av~--~~ 302 (445)
T PRK09221 267 LGA----AFAAERFGVT-PD---IITFAKGLT-NGAIPMGAVI--AS 302 (445)
T ss_pred Cch----hhHHHhcCCC-CC---EEEeccccc-cCcccceeeE--Ec
Confidence 331 1122222111 12 347899997 56 6788765 55
No 328
>PRK06917 hypothetical protein; Provisional
Probab=98.29 E-value=0.00041 Score=69.01 Aligned_cols=159 Identities=11% Similarity=0.092 Sum_probs=90.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHHH-HHHcCCe------------EEEEEeecCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPKV-FTLAGLS------------VKSYRYYDPA 201 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~-~~~~G~~------------~~~v~~~~~~ 201 (350)
+++.+ +++|++|...+..+.... .+| .+|+...-+|...... +...|.. +..+|.....
T Consensus 92 ~~v~f--~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (447)
T PRK06917 92 NWSFF--VNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCY 169 (447)
T ss_pred CEEEE--eCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccc
Confidence 57888 999999998876543221 133 6788888888765432 2222211 1112210000
Q ss_pred C--CCC--------CHHHHHHHhhcCC-CCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCC-CC
Q 018820 202 T--RGL--------NFQGLLEDLGSAP-AGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGF-AS 267 (350)
Q Consensus 202 ~--~~~--------d~~~l~~~l~~~~-~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~ 267 (350)
. ++. +++.+++.++... +....+++-. ..|--|+ .++++-+++|.++|++||+++|+||+..+| ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt 249 (447)
T PRK06917 170 RCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT 249 (447)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc
Confidence 0 001 2355666665432 2233444332 2233334 567999999999999999999999999887 33
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
+. ......+.-. ..+ -.|+|.++ .|+ -+|.++ +.
T Consensus 250 G~----~~a~~~~gv~-PDi---~~~gK~l~-~G~~Pi~a~~--~~ 284 (447)
T PRK06917 250 GA----MFAMEHWGVE-PDI---MTLGKGLG-AGYTPIAATV--VS 284 (447)
T ss_pred cc----hhhHHhcCCC-CCE---EEeeehhc-cCCcceEEEE--Ec
Confidence 31 1122222111 233 35699998 785 889766 55
No 329
>PLN02880 tyrosine decarboxylase
Probab=98.28 E-value=0.00011 Score=73.85 Aligned_cols=206 Identities=13% Similarity=0.106 Sum_probs=126.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCcc--CCcEEEEecCCchhHHHHHHHHHHHhc-
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIR--ENRVTTVQCLSGTGSLRVGAEFLARHY- 166 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~--~~~v~~~~t~G~~~al~l~~~l~~~~~- 166 (350)
...+-+.+....+... ..|....+..++-+.+.+| ++|.+..... ...-++ |.||+++...+. +.++-.
T Consensus 96 ~~~lad~l~~~~n~~~--~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al-~~AR~~~ 170 (490)
T PLN02880 96 AGFLGEMLSAGLNIVG--FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVL-LAARDRV 170 (490)
T ss_pred HHHHHHHHHHhhccCC--cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHH-HHHHHHH
Confidence 4445555444442222 2233333566777777777 3443211000 012344 899999886642 223211
Q ss_pred ---------CCCEEEEcCCCCCChHHHHHHcCCe---EEEEEeecC-CCCCCCHHHHHHHhhc---CCCCcEEEEecCCC
Q 018820 167 ---------HQRTIYIPQPTWGNHPKVFTLAGLS---VKSYRYYDP-ATRGLNFQGLLEDLGS---APAGAIVLLHACAH 230 (350)
Q Consensus 167 ---------~gd~Vlv~~P~y~~~~~~~~~~G~~---~~~v~~~~~-~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~ 230 (350)
+.-+|++++-+.......++..|+. ++.||. ++ +++.+|++.|++.+++ +...+.+|+-+...
T Consensus 171 ~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~-d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGT 249 (490)
T PLN02880 171 LRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKT-DSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGT 249 (490)
T ss_pred HHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeec-CCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCC
Confidence 1225667777766677788888984 788888 54 3578999999999864 23346677777778
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC-cEEEEeccccccCccCcceeEEEE
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG-ECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
-.||.+-+ +++|+++|+++|+|+.+|-||.++..-. +..+.....-. -=-+..++-|.++ .-.-+|++.
T Consensus 250 T~~GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~ll- 319 (490)
T PLN02880 250 TSSTAVDP---LLELGKIAKSNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLW- 319 (490)
T ss_pred CcCcccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEEE-
Confidence 88987776 4667888999999999999999865321 12222211101 1134567899775 889999888
Q ss_pred eeCChh
Q 018820 310 VCKTAD 315 (350)
Q Consensus 310 v~~~~~ 315 (350)
..+++
T Consensus 320 -vr~~~ 324 (490)
T PLN02880 320 -VKDRN 324 (490)
T ss_pred -EeCHH
Confidence 66554
No 330
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.28 E-value=4.4e-05 Score=69.97 Aligned_cols=194 Identities=19% Similarity=0.228 Sum_probs=119.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc-CCCEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY-HQRTI 171 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~-~gd~V 171 (350)
...+++++.... .....+++.| -..+|-+.+|+. +|. +.-.+ .++||.+..+ .++..+. +|..|
T Consensus 35 TdeMr~am~eA~-vgDdVyGeD~--tt~rLE~~vA~l-~GK------EAgLF---v~SGTmgNll--aIm~Hc~~rg~ei 99 (384)
T KOG1368|consen 35 TDEMRRAMAEAS-VGDDVYGEDP--TTNRLEQRVAEL-FGK------EAGLF---VPSGTMGNLL--AIMVHCHQRGSEI 99 (384)
T ss_pred hHHHHHHHhhcc-cCcccccCCc--cHHHHHHHHHHH-hCc------cceee---ecccccccHH--HHHHHhcCCCceE
Confidence 566666655543 1233444544 457788888887 565 33444 4445555555 3445555 89999
Q ss_pred EEcCCCCC-ChH--HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-----CCcEEEEecCCCCCCC-CCCCHHHH
Q 018820 172 YIPQPTWG-NHP--KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-----AGAIVLLHACAHNPTG-VDPTLQQW 242 (350)
Q Consensus 172 lv~~P~y~-~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~l~~~~p~NPTG-~~~s~~~~ 242 (350)
++-+-+.- .|+ .+....|+.+.++.- +++..+|+++++.++.... +...++.+-|-||-+| .+++.|++
T Consensus 100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~ 177 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEEL 177 (384)
T ss_pred EeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHH
Confidence 98875432 121 233456666766654 4456799999999987421 2244777777787777 99999999
Q ss_pred HHHHHHHHhcCcEEEEccCCCC---CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhH
Q 018820 243 ERIRQLMRSKGLLPFFDSAYQG---FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADV 316 (350)
Q Consensus 243 ~~i~~~~~~~~~~ii~DeaY~~---~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~ 316 (350)
.++.+||++||+-+-.|-+--. .+.+ -++....+..+.|=. =|||.+| --||-++ .++++.
T Consensus 178 ~~v~~lak~~glkLH~DGARi~NAavasg------V~vk~i~~~fDSVsi--CLSKglg---APVGSVi--VG~k~F 241 (384)
T KOG1368|consen 178 DRVKALAKRHGLKLHMDGARIFNAAVASG------VPVKKICSAFDSVSI--CLSKGLG---APVGSVI--VGSKDF 241 (384)
T ss_pred HHHHHHHhccCCeeecchhhhhhHHHHcC------CCHHHHHHhhhhhhh--hhhccCC---CCcccEE--EccHHH
Confidence 9999999999999998865322 1111 122222222222211 2689887 4588877 666553
No 331
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.27 E-value=0.00039 Score=69.42 Aligned_cols=151 Identities=15% Similarity=0.192 Sum_probs=84.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcC------------CeEEEEEeecCCC--CC----CCHH
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAG------------LSVKSYRYYDPAT--RG----LNFQ 208 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G------------~~~~~v~~~~~~~--~~----~d~~ 208 (350)
+++|++|...+..+.......++|+...-+|.+.....- ..| ..+..+|+.+... +. -+.+
T Consensus 127 ~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (459)
T PRK06931 127 GPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 689999998876654333344678878888876653332 111 1122233211100 00 1223
Q ss_pred HH----HHHhhc---CCCCcEEEEe-cCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCCchHHHH
Q 018820 209 GL----LEDLGS---APAGAIVLLH-ACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDSDAQSVR 278 (350)
Q Consensus 209 ~l----~~~l~~---~~~~~~~l~~-~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~~~~~~~ 278 (350)
.+ ++.+.. .++....+++ +-..+- |+ .++++-++++-++|++||+++|+||+.-+|. .+. .+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~g-G~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~----~~a~~ 281 (459)
T PRK06931 207 ALTYYFENFIEDVESGVRKPAAVILEAIQGEG-GVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK----MFAFE 281 (459)
T ss_pred HHHHHHHHHHHhhhcCCCceEEEEEccccCCC-CCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch----HHHhh
Confidence 22 222221 2222334444 333333 54 5679999999999999999999999999884 331 12222
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+ .-...++ .++|.++ .|+-+|.++
T Consensus 282 ~~-gv~PDiv---t~gK~l~-gG~Pi~av~ 306 (459)
T PRK06931 282 HA-GIEPDII---VMSKAVG-GGLPLAVLG 306 (459)
T ss_pred hc-CCCCCEE---Eeccccc-CCcceeeee
Confidence 22 1112344 3599998 789999644
No 332
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.24 E-value=0.00035 Score=69.86 Aligned_cols=159 Identities=14% Similarity=0.172 Sum_probs=90.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCCC--CC--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPAT--RG-- 204 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~~--~~-- 204 (350)
++.+ .+++|++|...+..+........+|+...-+|.+.... +...|. .+..+|+..... ++
T Consensus 128 ~v~f-~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 206 (464)
T PRK06938 128 KIQF-CGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLG 206 (464)
T ss_pred eEEE-eCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCc
Confidence 4544 14799999988766543333346787777777665422 221110 122333211000 00
Q ss_pred ------CCHHHHHHHhhcCC---CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCCc
Q 018820 205 ------LNFQGLLEDLGSAP---AGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDSD 273 (350)
Q Consensus 205 ------~d~~~l~~~l~~~~---~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~~ 273 (350)
.+++.+++.+.... ...+.+++-.-+---|++ ++++-++++.++|++||+++|+||+.-+|. .|.
T Consensus 207 ~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~---- 282 (464)
T PRK06938 207 GEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK---- 282 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH----
Confidence 12566777775421 123344433222223554 569999999999999999999999999984 331
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.+....+ .-...+++ ++|.+| .|+-+|.++ +.
T Consensus 283 ~~a~e~~-gv~PDiv~---~gKglg-gG~PlsAv~--~~ 314 (464)
T PRK06938 283 MFAFEHA-GIIPDVVV---LSKAIG-GSLPLAVVV--YR 314 (464)
T ss_pred HHHHHhc-CCCCCEEE---eecccc-CCCceEEEe--eh
Confidence 1222222 11124444 499998 789999877 54
No 333
>PRK07483 hypothetical protein; Provisional
Probab=98.23 E-value=0.00042 Score=68.90 Aligned_cols=161 Identities=16% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHH-HHHHcCC------------eEEEEEe---
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPK-VFTLAGL------------SVKSYRY--- 197 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~--- 197 (350)
.+++.+ +++|++|...+..+..... +| .+|+...-+|.+... .+...|- .+..++.
T Consensus 90 ~~~v~f--~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~ 167 (443)
T PRK07483 90 LEHVYF--VSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYA 167 (443)
T ss_pred CCEEEE--cCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcc
Confidence 368888 9999999988766543331 33 567777777766532 2222111 1111221
Q ss_pred ecCCCCCCC--------HHHHHHHhhc-CCCCcEEEEecCCC-CCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 198 YDPATRGLN--------FQGLLEDLGS-APAGAIVLLHACAH-NPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 198 ~~~~~~~~d--------~~~l~~~l~~-~~~~~~~l~~~~p~-NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.......+ ++.+++.+.. .+...+.+++-.-+ +--| ..++++-+++|.++|++||+++|+||+.-+|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfG 247 (443)
T PRK07483 168 YREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMG 247 (443)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcc
Confidence 000000000 2455555542 22333344443222 1124 46678899999999999999999999999884
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
--+ ..+....+ .-...+++ |+|.++ .|+ -+|.++ +.
T Consensus 248 RtG---~~~a~~~~-gv~PDiv~---~gK~l~-gG~~Pi~av~--~~ 284 (443)
T PRK07483 248 RTG---TLFACEED-GVAPDLVT---IAKGLG-AGYQPIGAVL--AS 284 (443)
T ss_pred cCc---HHHHHhhc-CCCCCeee---ehhhhc-cCccccEEEE--Ec
Confidence 221 11222222 11123443 499998 786 899877 65
No 334
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.23 E-value=0.00015 Score=71.65 Aligned_cols=156 Identities=14% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHH-HHHHcCC-------------eEEEEEeec
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPK-VFTLAGL-------------SVKSYRYYD 199 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~ 199 (350)
-+++.+ +++|++|...+..+-.... ++ .+|+...-+|.+... .+...+- .+..+|. .
T Consensus 100 ~~~v~f--~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~-~ 176 (422)
T PRK05630 100 LDHVFY--SDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPA-P 176 (422)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCC-C
Confidence 368888 9999999988765533321 23 568888888876432 2221111 1122222 1
Q ss_pred CCCCCCC---H----HHHHHHhhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 200 PATRGLN---F----QGLLEDLGSAPAGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 200 ~~~~~~d---~----~~l~~~l~~~~~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
. ....+ . +.+++.+. ...+.+++-. .+.-.|+ .++.+-+++|.++|++||+++|.||+.-+|...+
T Consensus 177 ~-~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG- 251 (422)
T PRK05630 177 P-VRGSSPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG- 251 (422)
T ss_pred c-ccCCChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc-
Confidence 0 01111 1 22333332 2233444443 2555676 4568889999999999999999999998884322
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
..+....+ .-...++ +|+|.++ .| .-+|+++ +.
T Consensus 252 --~~~a~~~~-gv~PDi~---t~gK~l~-gG~~p~~av~--~~ 285 (422)
T PRK05630 252 --ELFATLAA-GVTPDIM---CVGKALT-GGFMSFAATL--CT 285 (422)
T ss_pred --hhhHHHhc-CCCCCee---eeechhh-cCccccceee--cc
Confidence 11121111 1112344 7799886 67 4788766 65
No 335
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.22 E-value=5.3e-05 Score=73.04 Aligned_cols=154 Identities=16% Similarity=0.016 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCC-chhHHHHHHHHHHHhc---CCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLS-GTGSLRVGAEFLARHY---HQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G-~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
..+.|+.+++++ +.. . +++|++ |.| +|++++.++ ..++. +||.|++ .|.......+++..|++++.
T Consensus 46 ~~~~r~~l~~l~-~~~-~---~~~vvf--~~gs~T~a~~~~~--~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELL-NIP-D---NYKVLF--LQGGATGQFAAVP--LNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHh-CCC-C---CceEEE--EcCCchHHHHHHH--HhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEE
Confidence 446677777764 431 1 567888 877 999998854 44454 4454433 22222223377888999998
Q ss_pred EEeecCCCCCCC-HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLN-FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d-~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
++. ++++.-.+ .+..+..+.++++ +|.++...|.||+.+. ++++.+|+++++|-+=.--. -. -|
T Consensus 116 ~~~-~~~g~~~~~~~~~~~~~~~~~~---lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~-~~--id 180 (355)
T cd00611 116 VAA-KEEGKYTKIPDVETWDLAPDAA---YVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSNILS-RP--ID 180 (355)
T ss_pred Eec-ccccCCCCCCCHhhcCCCCCCC---EEEEeCCcccccEEcc--------eecccCCCeEEEEccccccC-CC--CC
Confidence 887 43321113 2222222333333 6777888999999743 34455999999997532211 11 11
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+.. . . +.+.|--|.+|-+ .+|.++
T Consensus 181 ---v~~---~--~-~~~ss~~K~lGP~--G~g~l~ 204 (355)
T cd00611 181 ---VSK---F--G-VIYAGAQKNLGPA--GVTVVI 204 (355)
T ss_pred ---HHH---h--C-EEEeecccccCCC--ceEEEE
Confidence 111 1 2 3556678998854 456555
No 336
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.22 E-value=4.8e-05 Score=76.85 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=93.3
Q ss_pred CEEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEEEecCCCCCCCCCCCHHHH
Q 018820 169 RTIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVLLHACAHNPTGVDPTLQQW 242 (350)
Q Consensus 169 d~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~~~s~~~~ 242 (350)
..|++++-........++..|+ +++.+|. +++ +.+|++.|++.+++ +..+.++++.+..++.||.+-+.
T Consensus 210 ~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~-d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl--- 284 (522)
T TIGR03799 210 LAILVSERGHYSLGKAADVLGIGRDNLIAIKT-DAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPL--- 284 (522)
T ss_pred eEEEECCCchHHHHHHHHHcCCCcccEEEEEe-CCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCH---
Confidence 4677877766666777777888 7899998 654 68999999998863 23345666666777899988875
Q ss_pred HHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC-CcEEEEeccccccCccCcceeEEEEeeCChhH
Q 018820 243 ERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG-GECFIAQSYAKNLGLYGERVGALSIVCKTADV 316 (350)
Q Consensus 243 ~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~ 316 (350)
++|+++|+++|+|+.+|-+|.+...-. ...+.....- .-=.+..|.-|.++ .-.-+|++. ..+++.
T Consensus 285 ~eIa~i~~~~g~~lHVDaA~gg~~~~~-----~~~r~~l~gle~aDSit~d~HK~l~-~P~g~G~ll--vr~~~~ 351 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDAAWGGATLLS-----NTYRHLLKGIERADSVTIDAHKQLY-VPMGAGMVL--FKDPAL 351 (522)
T ss_pred HHHHHHHHHcCCeEEEEchhhhHHHhC-----HHHHHHhcCchhCCEEEEChhhcCC-cCcccEEEE--EeCHHH
Confidence 666888999999999999998654211 1122222110 11234678899775 557889877 666543
No 337
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.22 E-value=0.00052 Score=68.70 Aligned_cols=160 Identities=13% Similarity=0.123 Sum_probs=94.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhc-----C-CCEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHY-----H-QRTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPA 201 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~-----~-gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~ 201 (350)
++|.+ +++|++|...+..+..... + ..+|+...-+|.+.... +...|. .+..+|..+..
T Consensus 130 ~~v~f--~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~ 207 (472)
T PRK08742 130 SKVFY--ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAY 207 (472)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcc
Confidence 58888 9999999988765543331 2 25788888888766422 222111 11222221100
Q ss_pred --CCCC--------CHHHHHHHhhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC
Q 018820 202 --TRGL--------NFQGLLEDLGSAPAGAIVLLHAC-AHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS 269 (350)
Q Consensus 202 --~~~~--------d~~~l~~~l~~~~~~~~~l~~~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~ 269 (350)
.++. +++.+++.+.........+++-. -+.-.|. .++++-++++.++|++||+++|+||+.-+|..-+
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG 287 (472)
T PRK08742 208 LAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG 287 (472)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 0111 24566666654434444555443 2555566 5679999999999999999999999999885322
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
+ .+....+ .-...+++ |+|.++ .|+ -+|.++ +.
T Consensus 288 --~-~~a~e~~-gv~PDiv~---~gKgl~-gG~~Plaav~--~~ 321 (472)
T PRK08742 288 --T-LFACEQA-GVMPDLLC---LSKGLT-GGFLPLSAVL--AT 321 (472)
T ss_pred --c-chHHHhc-CCCCCEEE---Eccccc-CCCCCcceee--cc
Confidence 1 1222222 11224444 499998 784 889766 55
No 338
>PRK07481 hypothetical protein; Provisional
Probab=98.22 E-value=0.00048 Score=68.59 Aligned_cols=161 Identities=14% Similarity=0.163 Sum_probs=89.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHH-HHHHcCC------------eEEEEEeecC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPK-VFTLAGL------------SVKSYRYYDP 200 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~ 200 (350)
.+++.+ +++|++|...+..+..... +| .+|+...-+|.+... .+...|- .+..++..+.
T Consensus 104 ~~~v~f--~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~ 181 (449)
T PRK07481 104 MRRVFF--SSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWL 181 (449)
T ss_pred CCEEEE--cCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcc
Confidence 357888 9999999988765543321 23 567777777776432 2211111 1122221000
Q ss_pred C--CCC-CCHHHH--------HHHhh-cCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 201 A--TRG-LNFQGL--------LEDLG-SAPAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 201 ~--~~~-~d~~~l--------~~~l~-~~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
. .+. .|.+.+ ++.+. ..++..++|++-.-+.-.|. .++++-++++.++|++||+++|+||+..+|..
T Consensus 182 ~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR 261 (449)
T PRK07481 182 YRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR 261 (449)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc
Confidence 0 011 133333 33332 22233444444433333455 46788899999999999999999999999843
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
-+ .......+ .-...+++ ++|.++ .| +-+|.++ +.
T Consensus 262 tG---~~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~--~~ 297 (449)
T PRK07481 262 TG---SWFGSRGW-GVKPDIMC---LAKGIT-SGYVPLGATM--VN 297 (449)
T ss_pred Cc---hhhHhhhc-CCCCCEEE---Eeeccc-CCCcCceEEE--Ec
Confidence 21 11122222 11123443 499998 78 4899866 65
No 339
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.21 E-value=5.9e-05 Score=72.32 Aligned_cols=242 Identities=15% Similarity=0.138 Sum_probs=124.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP-IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p-~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...+|+..|.-...-|. -.|.+.++.++.... . .|.. ..-..+.+..+++.+...- +. ..+++.+ +++
T Consensus 15 G~~~lD~~~~~~~~~lGh--~~p~i~~ai~~~~~~-~---~~~~~~~~~~~~~~~la~~L~~~~-p~-~~~~v~f--~~s 84 (339)
T PF00202_consen 15 GREYLDFMSGYGSVNLGH--NHPEIAEAIAEQANK-L---NYVSFSGFTHPEAAELAEKLAELF-PG-GLDRVFF--ANS 84 (339)
T ss_dssp SEEEEESSHHHHTTTT-B--T-HHHHHHHHHHHHH-C---SSCSTTTSEEHHHHHHHHHHHHHS-ST-TEEEEEE--ESS
T ss_pred CCEEEECCCCccceecCC--CccccchhHHHHhhh-c---ccccccceeccchhhhhhhhhhcc-cc-ccceeee--ccC
Confidence 456889976633122222 123344443333211 1 1211 2223344555555532211 10 2568888 999
Q ss_pred chhHHHHHHHHHH------HhcCCCEEEEcCCCCCChHHH-HHHcC------------CeEEEEEeecCCCCCCCHHH--
Q 018820 151 GTGSLRVGAEFLA------RHYHQRTIYIPQPTWGNHPKV-FTLAG------------LSVKSYRYYDPATRGLNFQG-- 209 (350)
Q Consensus 151 ~~~al~l~~~l~~------~~~~gd~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~~~~~~~~d~~~-- 209 (350)
|++|+..+..+.. .......|+...-+|...... +...+ ..+..+|+ .+...
T Consensus 85 GseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~ 157 (339)
T PF00202_consen 85 GSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPF-------PDPAADE 157 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEET-------TCHHHHH
T ss_pred chHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccC-------Cccchhh
Confidence 9999988766543 222447888888888765432 21111 12455555 22222
Q ss_pred --------HHHHhhc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCC-CCCCCCCchHHHH
Q 018820 210 --------LLEDLGS-APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGF-ASGSLDSDAQSVR 278 (350)
Q Consensus 210 --------l~~~l~~-~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~~~~~~~~~~~~ 278 (350)
+++.+.. ..+....+++-.-+--.|.. ++++-+++|.++|++||+++|.||+..+| ..|. . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~---~-~a~~ 233 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK---F-FASE 233 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS---S-SGHH
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC---c-ccee
Confidence 3333222 12222333333223234544 46778899999999999999999999999 4442 1 2222
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh-hcccccCCChhHHHHHHHHh
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV-IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~i~~~~L 347 (350)
.+ ...+.+++ |+|.++ .|+-+|.++ +. +++.+.+... +..++. ...++..++...|
T Consensus 234 ~~-gv~PDiv~---~gK~l~-gG~p~sav~--~~-----~~i~~~~~~~~~~~T~~-g~p~~~aaa~~~l 290 (339)
T PF00202_consen 234 HY-GVDPDIVT---FGKGLG-GGLPISAVL--GS-----EEIMEAFQPGSHGSTFG-GNPLSCAAALATL 290 (339)
T ss_dssp HH-TSSSSEEE---EEGGGG-TTSSEEEEE--EE-----HHHHTTSCTTSSTCTTT-T-HHHHHHHHHHH
T ss_pred cc-cccCcccc---cccchh-hhhhccccc--cc-----chhhccccccccccccc-cchHhhhhhhhHH
Confidence 22 22234544 469998 789999877 66 5565544322 223333 3344444444433
No 340
>PRK07036 hypothetical protein; Provisional
Probab=98.21 E-value=0.00056 Score=68.41 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----c-C-CCEEEEcCCCCCChHHHH-HHcCC---
Q 018820 121 EFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----Y-H-QRTIYIPQPTWGNHPKVF-TLAGL--- 190 (350)
Q Consensus 121 ~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~-~-gd~Vlv~~P~y~~~~~~~-~~~G~--- 190 (350)
+.+..+|+.+... .+ -..++|.+ +++|++|...+..+.... . + ..+|+...-+|.+..... ...|.
T Consensus 95 ~~~~~lae~L~~~-~p-~~~~~v~f--~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~ 170 (466)
T PRK07036 95 APAAELAAKLAEL-AP-GDLNHVFL--TTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAAD 170 (466)
T ss_pred HHHHHHHHHHHHh-CC-CCcCEEEE--eCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcc
Confidence 3445555554322 11 11357888 999999998876553322 1 2 257877777787654222 11111
Q ss_pred ---------eEEEEEeecC--CCCCCC--------HHHHHHHhhc-CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHH
Q 018820 191 ---------SVKSYRYYDP--ATRGLN--------FQGLLEDLGS-APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLM 249 (350)
Q Consensus 191 ---------~~~~v~~~~~--~~~~~d--------~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~ 249 (350)
.+..+|..+. ..++.+ .+.+++.+.. .+.....+++-.-+.-.|. .++++-+++|.++|
T Consensus 171 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc 250 (466)
T PRK07036 171 RTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREIC 250 (466)
T ss_pred cccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHH
Confidence 1222222010 001111 2334444432 2333445554434444455 46788899999999
Q ss_pred HhcCcEEEEccCCCCC-CCCCCCCchHHHH-HHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 250 RSKGLLPFFDSAYQGF-ASGSLDSDAQSVR-MFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 250 ~~~~~~ii~DeaY~~~-~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
++||+++|+||+..+| ..|. ..... .+.-. ..++ .|+|.++ .| +-+|.++ +.
T Consensus 251 ~~~g~llI~DEV~tGfGRtG~----~~~~~~~~gv~-PDiv---t~gK~l~-gG~~Pi~av~--~~ 305 (466)
T PRK07036 251 RRYDILYISDEVVTGFGRLGH----FFASEAVFGIQ-PDII---TFAKGLT-SGYQPLGAVI--IS 305 (466)
T ss_pred HHcCCEEEEeechhCCCcCch----hhhhhhhcCCC-CCEE---EEccccc-cCccccEEEE--Ec
Confidence 9999999999999888 4331 11221 11111 2333 5699998 78 4899877 65
No 341
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.20 E-value=0.00018 Score=69.33 Aligned_cols=180 Identities=16% Similarity=0.059 Sum_probs=102.9
Q ss_pred ccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHH------HhCCCCCCccCCcEEEEecCC-chhHHHHHHHHHH
Q 018820 92 VLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKL------ILGADSPAIRENRVTTVQCLS-GTGSLRVGAEFLA 163 (350)
Q Consensus 92 ~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~------~~g~~~~~~~~~~v~~~~t~G-~~~al~l~~~l~~ 163 (350)
|.++++++.+.+..... ....|....-.++|.+.+.+- +++.. . ..+|++ +.| ||+|+..+ +..
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~---~~~v~~--~~gsgT~a~ea~--~~n 75 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-D---NYEVLF--LQGGATGQFAAV--PLN 75 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-C---CceEEE--EcCCchHHHHHH--HHh
Confidence 35666666666652111 112233334456555444433 44531 1 346777 665 99999884 455
Q ss_pred HhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEeecC---CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCC
Q 018820 164 RHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYDP---ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPT 238 (350)
Q Consensus 164 ~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~---~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s 238 (350)
++.+||++++..-+...+ ..+++..|+ ++.+.. ++ .+..+|++.++. .+. ..+|.++..-|.||+..+
T Consensus 76 l~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~-~~~~~~~~~~~~~~~~~--~~~---~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 76 LLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVAS-GKEGNYTKIPDPSTWEI--SED---AAYVHYCANETIHGVEFR 148 (349)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEec-cccCCCCCCCCHHhcCC--CCC---CCEEEEcCCCCcccEecc
Confidence 566888887665444333 556778898 777664 32 223455554442 222 235666667889999764
Q ss_pred HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 239 LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
++++.+++++++|.+=. +....+ | +. +. . +++.|--|.+|-+| +|.++
T Consensus 149 --------~l~~~~~~l~iVDavss-~g~~~i--d---~~---~~--d-~~~~ssqK~lgP~G--lg~l~ 196 (349)
T TIGR01364 149 --------ELPDVKNAPLVADMSSN-ILSRPI--D---VS---KF--G-LIYAGAQKNIGPAG--LTVVI 196 (349)
T ss_pred --------eecccCCCeEEEEcccc-ccCccC--C---HH---Hc--c-EEEEecccccCCCc--eEEEE
Confidence 55666899999997532 221111 1 11 11 2 77888899998666 56554
No 342
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.19 E-value=9.2e-05 Score=70.43 Aligned_cols=231 Identities=18% Similarity=0.209 Sum_probs=141.7
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC----CCCCCCCCCCC----cHHHHHHHHHHH
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR----SRVKEYLPIVG----LAEFNKLSAKLI 130 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~----~~~~~Y~p~~G----~~~lr~aia~~~ 130 (350)
.|+.+..+-.. ...+.|+|-..++.. .+.|.++.-....+. ....+|..-+- .+.|-..-++.+
T Consensus 13 ~i~~~i~~e~~-rq~~~ieLIASEN~~-------S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 13 EIFEAIQQELE-RQREHIELIASENFT-------SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred HHHHHHHHHHH-HHhhceeeeeccccC-------CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 35555543222 134789998887632 667777766654221 11122322111 223333344447
Q ss_pred hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcC--CeEEEEEeecCCCCCC
Q 018820 131 LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAG--LSVKSYRYYDPATRGL 205 (350)
Q Consensus 131 ~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G--~~~~~v~~~~~~~~~~ 205 (350)
||.+.. | ||-++|++|... .+++++.|||+|+-.+-....|..-- ...| .+.+.|++ ++++..+
T Consensus 85 Fga~~a-----n---VQPhSGs~AN~a--v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~I 153 (413)
T COG0112 85 FGAEYA-----N---VQPHSGSQANQA--VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLI 153 (413)
T ss_pred hCCCcc-----c---cCCCCchHHHHH--HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCcc
Confidence 886422 2 457888888876 67788999999999888888775432 2223 36777777 7788899
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~ 284 (350)
|.|.+++..++..+ .+++...-.-|- .-+|+++.++|.+-|.+++.|.+.- ++.-++. ...++..
T Consensus 154 DyD~~~k~a~e~kP--K~ii~G~SaY~r-----~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~--~p~P~~~----- 219 (413)
T COG0112 154 DYDEVEKLAKEVKP--KLIIAGGSAYSR-----PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGV--HPNPLPH----- 219 (413)
T ss_pred CHHHHHHHHHHhCC--CEEEECcccccc-----ccCHHHHHHHHHHhCceEEehHHHHHHHHhccc--CCCCCCc-----
Confidence 99999998876433 266543322222 4467888888889999999999863 3544431 1112211
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhccc
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPM 331 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~ 331 (350)
-=|+..|.-|+| .|=|-|.+. +.+. ++.+++.+.+-+.
T Consensus 220 -AdvVTtTTHKTl--rGPrGG~Il--~~~e----el~kkin~aVFPg 257 (413)
T COG0112 220 -ADVVTTTTHKTL--RGPRGGIIL--TNDE----ELAKKINSAVFPG 257 (413)
T ss_pred -cceEeCCcccCC--CCCCceEEE--eccH----HHHHHhhhhcCCc
Confidence 246788999997 799988766 6653 4555555544443
No 343
>PRK07480 putative aminotransferase; Validated
Probab=98.17 E-value=0.00078 Score=67.22 Aligned_cols=160 Identities=17% Similarity=0.194 Sum_probs=88.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh----c-CC-CEEEEcCCCCCChHH-HHHHcCCe------------EEEEEe--e
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH----Y-HQ-RTIYIPQPTWGNHPK-VFTLAGLS------------VKSYRY--Y 198 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~--~ 198 (350)
.+++.+ +++|++|...+..+.... . +| .+|+...-+|.+... .+...|.. +..++. .
T Consensus 111 ~~~v~f--~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 111 FNHVFF--TNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 358888 999999998876554332 1 33 467777777765432 11111111 111111 0
Q ss_pred cCCCCCCC--------HHHHHHHhhc-CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-C
Q 018820 199 DPATRGLN--------FQGLLEDLGS-APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-S 267 (350)
Q Consensus 199 ~~~~~~~d--------~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~ 267 (350)
-...+..+ .+.+++.+.. .+.+...+++-.-+.--|+ .++++-+++|.++|++||+++|+||+..+|. .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 268 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRT 268 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 00000011 2455544432 2333444444433333466 4577789999999999999999999999883 3
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~ 312 (350)
+. .+....+ .-...++ .|+|.++ .|+ -+|.++ +.
T Consensus 269 G~----~~a~~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~--~~ 303 (456)
T PRK07480 269 GE----WFGSQHF-GIKPDLM---TIAKGLT-SGYIPMGAVG--VG 303 (456)
T ss_pred cc----hhhhhhc-CCCCCee---eeehhhc-cCCccceEEE--Ec
Confidence 31 1122222 1112333 5699998 785 789766 65
No 344
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.16 E-value=5.6e-05 Score=68.43 Aligned_cols=175 Identities=16% Similarity=0.120 Sum_probs=119.9
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
+..|.+.+++++ |. |.+-+ |+|+.++=.. .+.+++.+||.|++..-......-+++++|+++..||-.
T Consensus 63 I~~F~~dlaeFl-g~-------D~~R~--t~GARe~Kfa--vMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFL-GM-------DEVRV--TAGAREAKFA--VMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHh-CC-------ceeee--cccchhhHHH--HHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 466888888885 54 34556 9999999877 567788999999987765444445678899999999964
Q ss_pred cCCCCCCCHHHHHHHhhc---CC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 199 DPATRGLNFQGLLEDLGS---AP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~---~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+-..+.++++...+.+++ .. +.+++.+++.+.---|. ..+.++++++|+++++.++...+|.-=.-
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN---l~Dakkva~ic~e~gvPlllN~AYt~Grm------- 200 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN---LADAKKVAKICREYGVPLLLNCAYTVGRM------- 200 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC---chhhHHHHHHHHHcCCceEeecceeeccc-------
Confidence 434578888888877764 21 22556666666655554 45668899999999999999999853211
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVES 322 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~ 322 (350)
+++. -+.+ --++++|=-|+|. +.--||.+ +-+.+..+.+..
T Consensus 201 -pvs~-ke~g-~DFiVgSGHKsmA-As~PiGvl---~~~eE~ae~V~r 241 (382)
T COG1103 201 -PVSG-KEIG-ADFIVGSGHKSMA-ASAPIGVL---AMSEEWAEIVLR 241 (382)
T ss_pred -cccc-cccC-CCEEEecCccchh-ccCCeeEE---eehhHHHHHHHh
Confidence 1111 0112 2355789999997 77789944 445554444443
No 345
>PRK06105 aminotransferase; Provisional
Probab=98.15 E-value=0.00075 Score=67.42 Aligned_cols=223 Identities=15% Similarity=0.122 Sum_probs=114.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...||+..|.--..-|. -.+.++++..+++. .-.....+ .....+.+..+++.+...- + ..-++|.+ +++
T Consensus 46 dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~-~~~~~~~~--~~~~~~~~~~lae~L~~~~-p-~~~~~v~f--~~S 117 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGF-SEQRLVEAAARQMK-KLPFYHTF--SHKSHGPVIDLAEKLVAMA-P-VPMSKVFF--TNS 117 (460)
T ss_pred CCCEEEEcchhHHhccCCC-CCHHHHHHHHHHHH-hCCCeecc--cccCCHHHHHHHHHHHHhC-C-CCCCEEEE--eCC
Confidence 4567899987742122222 12344444444443 11111111 0112233344555543221 1 11368888 999
Q ss_pred chhHHHHHHHHHHHh----c-CC-CEEEEcCCCCCChHHH-HHHcCC------------eEEEEEeecCCCCC-------
Q 018820 151 GTGSLRVGAEFLARH----Y-HQ-RTIYIPQPTWGNHPKV-FTLAGL------------SVKSYRYYDPATRG------- 204 (350)
Q Consensus 151 ~~~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~~~~------- 204 (350)
|++|...+..+.... . +| .+|+...-+|.....- +...|. .+..+|+.+...+.
T Consensus 118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 197 (460)
T PRK06105 118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE 197 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence 999998876653222 1 23 5677777777655322 111111 11112220000000
Q ss_pred ----CCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCC-CCCCCCCchHHH
Q 018820 205 ----LNFQGLLEDLGS-APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGF-ASGSLDSDAQSV 277 (350)
Q Consensus 205 ----~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~-~~~~~~~~~~~~ 277 (350)
...+.+++.+.. .+.+...|++-.-+.--|.. ++++-++++.++|++||+++|+||+.-+| ..|. .+..
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~----~f~~ 273 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN----MFGC 273 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch----hhhH
Confidence 013456666643 22334455554334444554 68899999999999999999999999888 3442 1222
Q ss_pred HHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
..+.-. ..+ -.|+|.++ .| +-+|.++ +.
T Consensus 274 ~~~~v~-PDi---~~~gK~lg-gG~~P~~av~--~~ 302 (460)
T PRK06105 274 ETFGIK-PDI---LVMSKQLS-SSYQPLSAVL--MN 302 (460)
T ss_pred HhcCCC-CCe---eeeecccc-cCcccceEEE--Ec
Confidence 222111 233 36799998 66 5889876 65
No 346
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.15 E-value=6.2e-05 Score=80.91 Aligned_cols=176 Identities=17% Similarity=0.228 Sum_probs=109.7
Q ss_pred CCCCC---CCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHH-HHHHH-hcCCC----EEEEcCCCC
Q 018820 111 KEYLP---IVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGA-EFLAR-HYHQR----TIYIPQPTW 178 (350)
Q Consensus 111 ~~Y~p---~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~-~l~~~-~~~gd----~Vlv~~P~y 178 (350)
+-|.| .+|..++...+.+| ++|. +++.+ +.+|++++...+. .+.+. ..+|+ +|++++-.+
T Consensus 529 hP~qp~e~~qG~l~~i~e~q~~l~eltG~-------d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH 600 (954)
T PRK05367 529 HPFAPAEQAAGYRELIDQLEAWLAEITGY-------DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAH 600 (954)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHCC-------CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhh
Confidence 44555 24566666666666 3453 34444 4666666653322 11111 23454 699999888
Q ss_pred CChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 179 GNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 179 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
......+...|++++.++. +.+ ..+|++.|++.+.....+.+++++.+|++=.+ -.+.+++|+++|+++|+++++
T Consensus 601 ~snp~sa~~~G~~vv~v~~-d~~-G~iD~~~L~~~i~~~~~~la~V~it~pst~G~---~e~~I~eI~~i~h~~G~~v~V 675 (954)
T PRK05367 601 GTNPASAVMAGMKVVVVAC-DEN-GNIDLDDLRAKAEEHADNLAAIMITYPSTHGV---FEETIREICEIVHEHGGQVYL 675 (954)
T ss_pred hhhHHHHHHCCCEEEEECC-CCC-CCcCHHHHHHHHhccCCCeEEEEEEcCCCCee---ecCCHHHHHHHHHHcCCEEEE
Confidence 7777788999999999998 543 57999999999976544456677766654422 224578889999999999999
Q ss_pred ccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc----cCcceeEEE
Q 018820 259 DSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL----YGERVGALS 308 (350)
Q Consensus 259 DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl----~G~RvG~l~ 308 (350)
|.++..-..+ + . .+. +.+.. ++..|.-|.|+. .|=.+|++.
T Consensus 676 DgA~~~al~~-l-~---~pg---~~GAD-i~~~s~HK~f~~P~G~GGPg~G~l~ 720 (954)
T PRK05367 676 DGANMNAQVG-L-A---RPG---DIGAD-VSHLNLHKTFCIPHGGGGPGVGPIG 720 (954)
T ss_pred ECcChhhccC-C-C---Chh---hcCCC-EEEecCcccCCCCcCCCCCceEEEe
Confidence 9998532111 1 0 111 12223 455667788753 344577766
No 347
>PRK06149 hypothetical protein; Provisional
Probab=98.13 E-value=0.00057 Score=74.34 Aligned_cols=191 Identities=12% Similarity=0.094 Sum_probs=102.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-HHcC-------C------eEEEEEeecCC--CC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-TLAG-------L------SVKSYRYYDPA--TR 203 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G-------~------~~~~v~~~~~~--~~ 203 (350)
.+++.+ +++|++|...+..+.......+.|+..+-+|.+..... ...+ . .+..++..+.- .+
T Consensus 641 ~~~v~f--~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~ 718 (972)
T PRK06149 641 LDTVFL--VNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRF 718 (972)
T ss_pred cCEEEE--eCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcC
Confidence 357888 99999999887655433334466777777776543111 1000 0 01222220000 01
Q ss_pred C-CC-----HHHHHHHhh---cCCCCcEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 204 G-LN-----FQGLLEDLG---SAPAGAIVLLH-ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 204 ~-~d-----~~~l~~~l~---~~~~~~~~l~~-~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
. .+ .+.+++.++ ....+.+++++ +-..|--...++++-++++.++|++||+++|+||+.-+|.--+ +.
T Consensus 719 ~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~ 796 (972)
T PRK06149 719 RGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HY 796 (972)
T ss_pred CCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--cc
Confidence 1 11 233333332 22233334433 3334444466788999999999999999999999998773321 11
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH--hhcccccCCChhHHHHHHHHh
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL--VIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~i~~~~L 347 (350)
.+....+ .-...++ +|+|.+| .|+-+|+++ +. +++.+.+.. ....++ +.+.++..++...|
T Consensus 797 ~~a~e~~-gv~PDiv---t~gK~lg-~G~Pl~av~--~~-----~~i~~~~~~~~~~~sT~-~gnP~~~aaala~L 859 (972)
T PRK06149 797 FWGFEQQ-GVVPDII---TMAKGMG-NGHPLGAVI--TR-----REIAEALEAEGYFFSST-GGSPVSCRIGMAVL 859 (972)
T ss_pred chhhhhc-CCCCCEE---Eeccccc-CCeeeEEEE--Ec-----HHHHhhhccCCcccCCC-CCCHHHHHHHHHHH
Confidence 1122222 1112344 6799998 889999877 65 455544432 222233 34444444444433
No 348
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.10 E-value=0.00018 Score=76.74 Aligned_cols=209 Identities=13% Similarity=0.115 Sum_probs=117.3
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCC-CCCC----CCCcHHHHHHHHHHHhCCCCCCccCC-cEEEEe
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVK-EYLP----IVGLAEFNKLSAKLILGADSPAIREN-RVTTVQ 147 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~-~Y~p----~~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~ 147 (350)
++-|..+.. . ++....|+++...+..+. ...+ .|.. ..-+.+.|+.+++++ |.+. ++ +|++
T Consensus 35 ~iYLD~Aat-t----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l-ga~~----~~~~VvF-- 102 (805)
T PLN02724 35 VVYLDHAGA-T----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF-NAPP----SDYACVF-- 102 (805)
T ss_pred CEeEeCCCC-C----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh-CCCc----cceEEEE--
Confidence 566665544 2 333456777665543111 1111 1111 112567888888875 4421 23 5777
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecC-------CCCCCCH--HHHHHHhh
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDP-------ATRGLNF--QGLLEDLG 215 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~-------~~~~~d~--~~l~~~l~ 215 (350)
|.|+|+|+.+++..+ .+.+||.|+++.-.+....... +..|++++.++. +. +...++. +.+++.++
T Consensus 103 tsnaT~alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~-~~~~~~~~~~~g~~~~~~~~l~~~~~ 180 (805)
T PLN02724 103 TSGATAALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDI-EEAANQPTNSQGSVVVKSRGLQRRNT 180 (805)
T ss_pred eCChHHHHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccc-hhccccccccccccccchhhhhhhhh
Confidence 999999999865332 1568999998766665554433 356999999887 41 1112332 44555431
Q ss_pred ----cC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc-----CcEEEEccCCCCCCCCCCCCchHHHHHHhhc
Q 018820 216 ----SA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK-----GLLPFFDSAYQGFASGSLDSDAQSVRMFVAD 283 (350)
Q Consensus 216 ----~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~-----~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~ 283 (350)
.. ..+..++.++..+|-||+..+.++.+++.+.+..+ +++++.|-+- ......+ | +..+
T Consensus 181 ~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ-~~g~~pi--D---v~~~--- 251 (805)
T PLN02724 181 SKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAK-GCGTSPP--D---LSRY--- 251 (805)
T ss_pred hhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhh-hcCCCCC--C---hhhc---
Confidence 00 12234788888999999999987554443333222 3578889653 3322211 1 1111
Q ss_pred CCcEEEEeccccccCccCcceeEEE
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.-=+++.|+-|.+| .=-.+|+++
T Consensus 252 -~~Dfl~~S~HK~~G-gP~G~G~L~ 274 (805)
T PLN02724 252 -PADFVVVSFYKIFG-YPTGLGALL 274 (805)
T ss_pred -CCCEEEEecceecc-CCCCceEEE
Confidence 12356788899776 224578777
No 349
>PRK06148 hypothetical protein; Provisional
Probab=98.08 E-value=0.00075 Score=73.63 Aligned_cols=160 Identities=14% Similarity=0.130 Sum_probs=90.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcC------------CeEEEEEeecC--CCCC-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAG------------LSVKSYRYYDP--ATRG- 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~~~--~~~~- 204 (350)
+.+.+ +++|++|...+..+........+|+...-+|.+.... +...| -.+..++..+. ..+.
T Consensus 681 ~~v~f--~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 758 (1013)
T PRK06148 681 TVAFF--VNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERW 758 (1013)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCC
Confidence 57888 9999999998766543333446788878777665321 11111 01111111000 0011
Q ss_pred CC-------HHHHHHHhh---cCCCCcEEEEec-CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCC
Q 018820 205 LN-------FQGLLEDLG---SAPAGAIVLLHA-CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDS 272 (350)
Q Consensus 205 ~d-------~~~l~~~l~---~~~~~~~~l~~~-~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~ 272 (350)
.+ .+.+++.++ ......+.+++- -..+--.+.++++-++++.++|+++|+++|+||+.-+|. .| .
T Consensus 759 ~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG---~ 835 (1013)
T PRK06148 759 PDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG---S 835 (1013)
T ss_pred ChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC---C
Confidence 01 133444443 222333444433 233332346789999999999999999999999998884 33 1
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
..+....+. -...+ -+++|.+| .|+-+|.++ +.
T Consensus 836 ~~~a~e~~g-v~PDi---vt~gK~lg-gG~Plgav~--~~ 868 (1013)
T PRK06148 836 HWWAFETQG-VVPDI---VTMGKPIG-NGHPMGAVV--TT 868 (1013)
T ss_pred cchhhhhcC-CCcce---eeeccccc-CCcceEEEE--Ec
Confidence 112222221 11233 34699998 899999877 65
No 350
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.03 E-value=0.00022 Score=69.74 Aligned_cols=205 Identities=13% Similarity=0.140 Sum_probs=123.6
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
-.|||-.-.- + -.+.+.+++++.. ++ -.|....-..+|.+.++++ +|. +.++. |+.+++
T Consensus 42 V~IDLrSDTg-T----~apS~~m~aAM~~-----GD-D~Y~gdpSv~~Lee~vael-~G~-------E~alp--thqGRg 100 (467)
T TIGR02617 42 VFIDLLTDSG-T----GAVTQSMQAAMMR-----GD-EAYSGSRSYYALAESVKNI-FGY-------QYTIP--THQGRG 100 (467)
T ss_pred eEEECccCCC-C----CCCCHHHHHHHHc-----CC-cccccCchHHHHHHHHHHH-hCC-------ceEEE--CCCCch
Confidence 3566654433 1 1235555665543 22 2377666678899999887 464 23444 888888
Q ss_pred HHHHHHHHHHHhc-CCCEEEEcCC--------CCCChHHHHHHcCCeEEEEEee--------cCCCCCCCHHHHHHHhhc
Q 018820 154 SLRVGAEFLARHY-HQRTIYIPQP--------TWGNHPKVFTLAGLSVKSYRYY--------DPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 154 al~l~~~l~~~~~-~gd~Vlv~~P--------~y~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~ 216 (350)
+-.++ +...+. +|+.+.+..+ .|..-.......|+.++.++.. .+....+|++.+++.++.
T Consensus 101 aE~Il--~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~ 178 (467)
T TIGR02617 101 AEQIY--IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_pred HHHHH--HHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh
Confidence 88874 344456 6776664443 2333345677889988876431 122357899999999985
Q ss_pred CCC-C---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccC------CC----CCCCCCCCCchHHHHHH--
Q 018820 217 APA-G---AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSA------YQ----GFASGSLDSDAQSVRMF-- 280 (350)
Q Consensus 217 ~~~-~---~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~Dea------Y~----~~~~~~~~~~~~~~~~~-- 280 (350)
... . ...=+.+|-+ -|..++.+.++++.++|++||+.++.|-+ |. +-.+.+ .+++..
T Consensus 179 ~g~~~i~~v~~tlt~N~~--GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~-----~si~eI~r 251 (467)
T TIGR02617 179 VGPNNVPYIVATITCNSA--GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKN-----WSIEQITR 251 (467)
T ss_pred cCCCCceeeeeeEEEecC--CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcC-----CCHHHHHH
Confidence 311 1 1111222222 47899999999999999999999999864 31 111222 223322
Q ss_pred --hhcCCcEEEEeccccccCccCcceeEEEEeeCChh
Q 018820 281 --VADGGECFIAQSYAKNLGLYGERVGALSIVCKTAD 315 (350)
Q Consensus 281 --~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~ 315 (350)
.... . .+..|+||.++ ..+|-++ +.+++
T Consensus 252 E~~~~a-D-svt~slsKglg---ApvGg~L--ag~d~ 281 (467)
T TIGR02617 252 ETYKYA-D-MLAMSAKKDAM---VPMGGLL--CFKDD 281 (467)
T ss_pred HhhccC-C-EEEEEcCCCCC---CcccceE--Eecch
Confidence 2222 2 34678999876 6677666 55544
No 351
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.02 E-value=0.00021 Score=75.74 Aligned_cols=166 Identities=18% Similarity=0.181 Sum_probs=104.4
Q ss_pred CCCCC---CCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-h----cC-CCEEEEcCCCC
Q 018820 111 KEYLP---IVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-H----YH-QRTIYIPQPTW 178 (350)
Q Consensus 111 ~~Y~p---~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~----~~-gd~Vlv~~P~y 178 (350)
+-|.| .+|..+....+.++ +.|. +++.+|-++|..+...+...+.. . .+ .++|+++.=.+
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm--------d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saH 601 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF--------DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAH 601 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC--------CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEeccccc
Confidence 66888 78877776666666 3444 33355566666665332222111 1 12 36777877555
Q ss_pred CChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 179 GNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 179 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
......+...|++++.++. +++ ..+|+++|++.+.+...+.++|.+.+|++=. .+ .+.+++|+++|+++|.+++.
T Consensus 602 gtNpasa~~~GieVv~Vp~-D~~-G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 602 GTNPASAQMAGMRVVIVEC-DPD-GNVDLDDLKAKAAAAGDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred ccCHHHHHHCCCEEEEecc-CCC-CCcCHHHHHHHhhccCCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEE
Confidence 3334557788999999998 654 5799999999997544455567776655444 33 56789999999999999999
Q ss_pred ccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 259 DSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 259 DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
|-+.. .....+ ..+.. .| -=|+..+.-|.|+
T Consensus 677 DgA~~-~a~~~l----~~Pg~---~G-ADi~~~s~HKtf~ 707 (954)
T PRK12566 677 DGANL-NAQVGL----ARPAD---IG-ADVSHMNLHKTFC 707 (954)
T ss_pred EeeCh-hhccCC----CChhh---cC-CCEEEecCCcccC
Confidence 98763 111111 11111 12 2356777888875
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.94 E-value=0.0025 Score=63.39 Aligned_cols=126 Identities=8% Similarity=0.045 Sum_probs=74.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh--------c---C-CCEEEEcCCCCCChHHH-HHHcCCeEE-----------EE
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH--------Y---H-QRTIYIPQPTWGNHPKV-FTLAGLSVK-----------SY 195 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~--------~---~-gd~Vlv~~P~y~~~~~~-~~~~G~~~~-----------~v 195 (350)
.++|.+ +++|++|...+..+.... . + ..+|+...-+|.+.... +...|.... .+
T Consensus 110 ~~~v~f--~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK08297 110 LPHLFF--VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 187 (443)
T ss_pred CCEEEE--eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcccc
Confidence 468998 999999998876554222 1 1 25688888888766432 222221100 01
Q ss_pred --Eee----cCCC-CC------CCHHHHHHHhhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccC
Q 018820 196 --RYY----DPAT-RG------LNFQGLLEDLGSAPAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 196 --~~~----~~~~-~~------~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
|.. ...+ .. -+++.+++.+...+.....+++-.-+---|. .++++.+++|.++|++||+++|+||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV 267 (443)
T PRK08297 188 DNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV 267 (443)
T ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 100 0000 00 0234555666544444444444322222343 47899999999999999999999999
Q ss_pred CCCCCC
Q 018820 262 YQGFAS 267 (350)
Q Consensus 262 Y~~~~~ 267 (350)
+.+|..
T Consensus 268 ~tGfGR 273 (443)
T PRK08297 268 QTGVGL 273 (443)
T ss_pred hhccCc
Confidence 998843
No 353
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.93 E-value=0.00024 Score=76.47 Aligned_cols=150 Identities=15% Similarity=0.198 Sum_probs=97.1
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC-----Cc----HHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV-----GL----AEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~-----G~----~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
+.-++.|.| + ...+++|++. +.+.+.....|.|.| |. -+|++.++++ .|.+ ..|+.+
T Consensus 78 ~~~ig~G~y-~----~~~P~vi~~~---i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~L-tG~~-----~anaSl 143 (954)
T PRK05367 78 RSYIGQGYY-G----THTPPVILRN---ILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADL-TGLE-----IANASL 143 (954)
T ss_pred CcccCCCCC-C----CcCcHHHHHH---HHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHH-HCCC-----hhhccc
Confidence 345688888 3 3345555432 222345455677743 53 3455666665 3554 668888
Q ss_pred EecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 146 VQCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
..++|.+...+...+ ...+ +++|++++-.|+....++ +..|++++.++. +.+ ++ . .
T Consensus 144 --~d~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~-~~d---~~---------~--~ 205 (954)
T PRK05367 144 --LDEATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA-AKA---LD---------H--D 205 (954)
T ss_pred --cccHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC-ccC---CC---------c--c
Confidence 888888887643222 2444 489999999999888765 467999999987 321 11 1 1
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
....+++.+| |-+|.+.+ +++|++.|+++|+++++|-
T Consensus 206 ~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda 242 (954)
T PRK05367 206 DVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAA 242 (954)
T ss_pred cEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEe
Confidence 2233445454 78998874 7888999999999999974
No 354
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=97.88 E-value=0.0003 Score=64.46 Aligned_cols=219 Identities=19% Similarity=0.185 Sum_probs=117.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCc----HHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGL----AEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~----~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
...++||...+|...... ++++....+.+.+-......-.=+.|. ..|-+.+|++. +. +|-|+.
T Consensus 66 ~k~ilnFcaNnYLGLssh---Peii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh-~r------ED~ily-- 133 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSH---PEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH-GR------EDTILY-- 133 (417)
T ss_pred ccceeeecccccccccCC---hHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh-CC------CceEEe--
Confidence 446899998888433333 344444444433100000000012333 34556677764 32 455554
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc-EEEEe
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA-IVLLH 226 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-~~l~~ 226 (350)
+++-.|..- .|-+...|.|.|+-..-. |..++. |+++-. .+ ...|+..++..+..+.+-. .+++.
T Consensus 134 -pscfdANag--~feail~pedAvfSDeLN---hASIId--GirLck-ry-----~h~dv~~l~~~l~~a~k~r~klv~T 199 (417)
T KOG1359|consen 134 -PSCFDANAG--AFEAILTPEDAVFSDELN---HASIID--GIRLCK-RY-----RHVDVFDLEHCLISACKMRLKLVVT 199 (417)
T ss_pred -ccccccchH--HHHHhcChhhhhhccccc---cchhhh--hhHHHh-hh-----ccchhHHHHHHHHHhhhheEEEEEe
Confidence 333333322 344556777766654433 333332 222111 12 2356666776666543322 23333
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH-HHhhcCCcEEEEeccccccCccCccee
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR-MFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
..--.=-|-..+ +++|.+++++||.+++.||+...+.+|.- -.-.. .+--.++-.|+..+++|.+| |---|
T Consensus 200 Dg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~t---GrGt~E~~~vm~~vdiinsTLgKAlG--ga~GG 271 (417)
T KOG1359|consen 200 DGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGET---GRGTAEEFGVMGDVDIINSTLGKALG--GASGG 271 (417)
T ss_pred cceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCC---CCChHHHhCCCCcceehhhhhhhhhc--CCCCC
Confidence 222223344444 56778999999999999999998877631 11111 22224556788899999986 66679
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhccc
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIRPM 331 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~~~ 331 (350)
|.. +| ..+++-++...|+.
T Consensus 272 ytt--gp-----~~li~llrqr~Rpy 290 (417)
T KOG1359|consen 272 YTT--GP-----KPLISLLRQRSRPY 290 (417)
T ss_pred Ccc--CC-----hhHHHHHHhcCCce
Confidence 888 77 66777776666553
No 355
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.80 E-value=0.005 Score=59.27 Aligned_cols=233 Identities=15% Similarity=0.119 Sum_probs=130.8
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHH-HHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFN-KLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr-~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+||++--.-++.-|.....+.+.++...+.... ...+|.-..|.-.-| ..+++.+.+... .+.+++ ++..+
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~-v~Le~~l~~g~~~~R~~~~~~~~~~~~~----aea~~i--vnnn~ 93 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAP-VELETDLKTGKRGARLTELAELLCGLTG----AEAAAI--VNNNA 93 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhccc-ceeeeecccchhhHHHHHHHHHHhcccc----hhheee--ECCcH
Confidence 3455544222233333333444444444444222 233665555543222 244555555421 456666 77777
Q ss_pred hHHHHHHHHHHHhcCCCEEEEc----C-CCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 153 GSLRVGAEFLARHYHQRTIYIP----Q-PTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~----~-P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
.|+.+ .+.+... +.+|++. . +.-++...+++.+|++++++-. . ......+++.++.+++. ..+.+|+
T Consensus 94 aAVll--~~~al~~-~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~-t---n~t~~~d~~~AIne~ta-~llkV~s 165 (395)
T COG1921 94 AAVLL--TLNALAE-GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT-T---NRTHLKDYELAINENTA-LLLKVHS 165 (395)
T ss_pred HHHHH--HHhhhcc-CCeEEEEccccccCCCCChhHHHHHcCCEEEEecc-c---CcCCHHHHHHHhccCCe-eEEEEee
Confidence 77766 3334333 4344432 2 5777889999999999999865 1 23567889999988765 3333433
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
.|-+-=-.++ .++++++|+++++.++.|.+=....-. .+..+.+...|.. ++++|--|.|| |-|-|.+
T Consensus 166 -~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~~~la~GaD-LV~~SgdKllg--GPqaGii 233 (395)
T COG1921 166 -SNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-----EPDLREALALGAD-LVSFSGDKLLG--GPQAGII 233 (395)
T ss_pred -cccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-----ccchhHHHhcCCC-EEEEecchhcC--CCccceE
Confidence 2332222333 356688899999999999876555421 1344555555544 44778899875 8889955
Q ss_pred EEeeCChhHHHHHHHHHHH--hhcccccCCChhHH
Q 018820 308 SIVCKTADVAGRVESQVKL--VIRPMYSNPPIHGA 340 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~q 340 (350)
+ +.++ ++.+++. +.|.+-...+.+..
T Consensus 234 ~---GkKe----lI~~lq~~~l~Ralrv~K~tla~ 261 (395)
T COG1921 234 V---GKKE----LIEKLQSHPLKRALRVDKETLAA 261 (395)
T ss_pred e---chHH----HHHHHHhhhhhhhhhcCcHhHHH
Confidence 5 4444 4444433 34555444554443
No 356
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.76 E-value=0.00035 Score=67.95 Aligned_cols=152 Identities=16% Similarity=0.105 Sum_probs=89.2
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecC-CchhHHHHHHHHHHHhcC-CCEEEEcCCCCCC-hHH-HHHHcCC-eEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCL-SGTGSLRVGAEFLARHYH-QRTIYIPQPTWGN-HPK-VFTLAGL-SVK 193 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~-G~~~al~l~~~l~~~~~~-gd~Vlv~~P~y~~-~~~-~~~~~G~-~~~ 193 (350)
..+.|+.++++ ++.. . +++|++ +. ++|+++..++ ..++.+ ++.|+. +=.|+. +.. +.+..|+ +++
T Consensus 50 ~~~~r~~l~~l-~~~~-~---~~~v~~--~~gs~T~~~~~~~--~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTREL-LSLP-E---GYEVGI--VPGSDTGAWEMAL--WSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPR 119 (378)
T ss_pred HHHHHHHHHHH-hCCC-C---CceEEE--ECCchHHHHHHHH--HhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCce
Confidence 34556666655 4431 1 457887 65 7899998854 344554 344443 323322 122 2356788 888
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.++. + ++..+|++.+. . ++ ++.++...|.||+..+.+++ ++ +++|+++|+|-+ +.+..-++ |
T Consensus 120 ~~~~-~-~g~~~d~~~i~----~-~~---~V~~~h~~t~tG~~~pi~~I---~~--~~~g~~~vVDa~-qs~G~~pi--d 181 (378)
T PRK03080 120 VLEA-D-YGSLPDLSAVD----F-DR---DVVFTWNGTTTGVRVPVARW---IG--ADREGLTICDAT-SAAFALPL--D 181 (378)
T ss_pred Eecc-C-CCCCCCHhhcC----C-CC---CEEEEecCCccceeccchhh---cc--ccCCCeEEEecc-cccccCCC--C
Confidence 8876 3 34456766532 2 22 34566679999999986555 55 788999999964 44433221 1
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+..+ =+++.|.-|.++ .-..+|+++
T Consensus 182 ---v~~i------D~~~~s~~K~l~-~P~G~g~l~ 206 (378)
T PRK03080 182 ---WSKL------DVYTFSWQKVLG-GEGGHGMAI 206 (378)
T ss_pred ---HHHC------cEEEEehhhhCC-CCCceEEEE
Confidence 1111 266778889886 334567665
No 357
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=97.74 E-value=0.00063 Score=62.86 Aligned_cols=113 Identities=14% Similarity=0.176 Sum_probs=80.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc-CCCCCC-hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP-QPTWGN-HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~-~P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
.-+++ ...|+.++.. .+-.++.|||.|++. .-+|.. ...+.++.|++|..++. + .+....++.+.+.+.+++
T Consensus 69 ~tf~i--sgsGh~g~E~--al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~-~-~G~~~~le~i~~~lsqh~ 142 (385)
T KOG2862|consen 69 QTFVI--SGSGHSGWEA--ALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA-D-IGQAVPLEEITEKLSQHK 142 (385)
T ss_pred ceEEE--ecCCcchHHH--HHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec-C-cccCccHHHHHHHHHhcC
Confidence 34444 6667778877 344567899998865 456653 35677899999999976 3 356789999999998865
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
.+ +++++.-..-||+.- +-.+.+-++|++|+.++++|-+-+
T Consensus 143 p~--~vfv~hgdsSTgV~q--~~~~~~g~lc~k~~~lllVD~VaS 183 (385)
T KOG2862|consen 143 PK--AVFVTHGDSSTGVLQ--DLLAISGELCHKHEALLLVDTVAS 183 (385)
T ss_pred Cc--eEEEEecCccccccc--hHHHHHHHHhhcCCeEEEEechhh
Confidence 54 445543455566554 445667788999999999997643
No 358
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.014 Score=55.94 Aligned_cols=222 Identities=16% Similarity=0.131 Sum_probs=123.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+.+-||+..|.--...|+ - .|.+.+++..-. ....|.-.+..- .+..++........+-. ..++|.+ +++
T Consensus 54 ~g~EyiD~~ssw~~~~~Gh-a-npev~ral~~q~--~k~~hs~~~~~t-~eav~l~~~l~~~~~~~--~~~rvff--~ns 124 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGH-A-NPEVARALAEQA--KKLGHSSNGYFT-LEAVELEEVLSAVLGKG--SAERVFF--CNS 124 (433)
T ss_pred CcceeeeeccceeccccCC-C-CHHHHHHHHHHH--hhheeccCcccc-HHHHHHHHHHHhcccCC--CccEEEE--ecC
Confidence 3456899988854334443 2 444544443322 111121111111 22333333332222111 2789999 999
Q ss_pred chhHHHHHHHHHHHhc-CCC-----EEEEcCCCCCCh-HHHHHHcCCeEEEEEeec---CCC---CCCCHHHHHHHhhcC
Q 018820 151 GTGSLRVGAEFLARHY-HQR-----TIYIPQPTWGNH-PKVFTLAGLSVKSYRYYD---PAT---RGLNFQGLLEDLGSA 217 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~-~gd-----~Vlv~~P~y~~~-~~~~~~~G~~~~~v~~~~---~~~---~~~d~~~l~~~l~~~ 217 (350)
||+|...+..|..... .+. .|+...-+|.+. ...+...+......|. + ++. .--|...+++.++..
T Consensus 125 GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~-~p~~p~v~~~~ynd~t~l~k~~~~h 203 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPF-DPIAPDVVTAEYNDSTALEKLFESH 203 (433)
T ss_pred CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCC-CCCCCceeecccCCHHHHHHHHHhC
Confidence 9999988765543332 211 266556666544 3333333322222211 1 110 113688999999887
Q ss_pred CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 218 PAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
+....++++---+=--|. -+++|-+..|.+.|+++|+++|+||+.-+|..-+ ..+....+--..+ +..+.|.
T Consensus 204 ~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~~~~PD----I~t~aK~ 276 (433)
T KOG1401|consen 204 KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYFGVTPD----ITTVAKP 276 (433)
T ss_pred CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHhCcCCc----ceeehhh
Confidence 644445555433433343 3568889999999999999999999998865432 2244444432222 4567899
Q ss_pred cCccCcceeEEEEeeC
Q 018820 297 LGLYGERVGALSIVCK 312 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~ 312 (350)
++ .|+-+|... +.
T Consensus 277 L~-gGlPigA~~--v~ 289 (433)
T KOG1401|consen 277 LG-GGLPIGATG--VR 289 (433)
T ss_pred cc-CCceeEEEe--eh
Confidence 98 999999766 55
No 359
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=97.72 E-value=0.0021 Score=62.16 Aligned_cols=138 Identities=11% Similarity=-0.061 Sum_probs=80.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEeecCCCCCCCHHHHHH-HhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYDPATRGLNFQGLLE-DLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~ 217 (350)
.+|++ .+.++++++.. .+..++.+|+++++..-+...+ ..+++..|.. +.+.. ++.....+..++++ .+.+.
T Consensus 67 ~~v~~-~~gsgt~~~Ea--~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~-~~~~g~~~~~~~~~~~l~~~ 141 (360)
T PRK05355 67 YKVLF-LQGGASLQFAM--VPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAAS-SEDDGFTYIPPLDEWQLSDD 141 (360)
T ss_pred cEEEE-EcCCchHHHHH--HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEec-ccccCCCCCCChhhccCCCC
Confidence 34554 25677888877 4456677888887665444333 4567788864 55544 32112234444544 55443
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 218 PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
++ +|.++..-|.||+..+ ++++| +|+++|+|-+=.--. .. ..+.. . . +++.|--|.+
T Consensus 142 ~~---~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss~g~-~~-----idv~~---~--d-~~~~ssqK~l 198 (360)
T PRK05355 142 AA---YVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSDILS-RP-----IDVSK---F--G-LIYAGAQKNI 198 (360)
T ss_pred CC---EEEEccCCCcceEecC--ccccc------CCCcEEEEcCccccC-cc-----CCHHH---c--c-EEEEeccccc
Confidence 33 6666667889999974 24444 899999997533221 11 11111 1 2 7778888999
Q ss_pred CccCcceeEEE
Q 018820 298 GLYGERVGALS 308 (350)
Q Consensus 298 gl~G~RvG~l~ 308 (350)
|-+| +|.++
T Consensus 199 gP~G--lg~l~ 207 (360)
T PRK05355 199 GPAG--LTIVI 207 (360)
T ss_pred cCCc--eEEEE
Confidence 8444 56544
No 360
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.55 E-value=0.0072 Score=62.13 Aligned_cols=95 Identities=15% Similarity=0.249 Sum_probs=70.6
Q ss_pred EEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEEEecCCCCCCCCCCCHHHHH
Q 018820 170 TIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVLLHACAHNPTGVDPTLQQWE 243 (350)
Q Consensus 170 ~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~~~s~~~~~ 243 (350)
+|+++.-........+...|+ .++.||. ++ ++.+|++.|++.+++ ......+|+-+...-.+|.+=+.+++.
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv-D~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~ 301 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPV-DS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIV 301 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeec-CC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHH
Confidence 466776655566777778888 5899998 65 468999999988864 222344566667778899887777776
Q ss_pred HHHHHHHhcCc--EEEEccCCCCCC
Q 018820 244 RIRQLMRSKGL--LPFFDSAYQGFA 266 (350)
Q Consensus 244 ~i~~~~~~~~~--~ii~DeaY~~~~ 266 (350)
+|.+-++++|+ |+-+|-||.++.
T Consensus 302 ~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHHHHHcCCceeEeeeccccchh
Confidence 66666688998 699999999964
No 361
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.53 E-value=0.002 Score=69.51 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=91.4
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC-----CC----cHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI-----VG----LAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~-----~G----~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
-.+|.|.| + ...+++|.+..... +.....|.|. +| +.+++..++++. |.+ .+|+.+
T Consensus 106 ~fiG~G~y-~----~~~P~~v~~~i~~~---~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G~~-----~anaSL- 170 (993)
T PLN02414 106 SYIGMGYY-N----THVPPVILRNILEN---PGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-GLP-----MSNASL- 170 (993)
T ss_pred cccCCCCC-C----ccCCHHHHHHHHhC---hHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-CCC-----hhhEee-
Confidence 34567776 3 23345553332221 2223345553 34 455777777764 554 679999
Q ss_pred ecCCchhHHHHHHHHHHH-hcCC--CEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 147 QCLSGTGSLRVGAEFLAR-HYHQ--RTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~-~~~g--d~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
+.++|.+...+. ++. +.+| ++|++++-.|+.+..+++ ..|++++.++. +.. + .. ..
T Consensus 171 -~d~aTAaaea~~--~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~-~~~----~------~~---~~ 233 (993)
T PLN02414 171 -LDEGTAAAEAMA--MCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADE-KDF----D------YS---SG 233 (993)
T ss_pred -cCChHHHHHHHH--HHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecc-hhh----c------cc---cC
Confidence 999999888643 232 3444 789999999999877764 46999999887 321 1 00 11
Q ss_pred CcEEEEecCCCCC--CCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 220 GAIVLLHACAHNP--TGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 220 ~~~~l~~~~p~NP--TG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
....+++ |+| ||.+.+ +++|+++|+++|+++++
T Consensus 234 ~v~~vlv---q~P~~~G~v~d---v~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 234 DVCGVLV---QYPATDGEVLD---YAEFVKNAHANGVKVVM 268 (993)
T ss_pred ceEEEEE---ecCCCCeEEcC---HHHHHHHHHHcCCEEEE
Confidence 1223333 444 999864 67889999999999998
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.43 E-value=0.0059 Score=60.53 Aligned_cols=127 Identities=9% Similarity=0.060 Sum_probs=76.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc---------C---CCEEEEcCCCCCChHHH-HHHcCCe-EE------------
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY---------H---QRTIYIPQPTWGNHPKV-FTLAGLS-VK------------ 193 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~---------~---gd~Vlv~~P~y~~~~~~-~~~~G~~-~~------------ 193 (350)
-+++.+ +++|++|...+..+..... + +.+|+...-+|.+.... +...|.. ..
T Consensus 103 ~~~v~f--~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 180 (431)
T TIGR03251 103 LPHLFF--IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 180 (431)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccC
Confidence 368888 9999999988765543221 1 35788888777665432 2222211 00
Q ss_pred EEEee----cCCCCC-------CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccC
Q 018820 194 SYRYY----DPATRG-------LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 194 ~v~~~----~~~~~~-------~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
..|+. +.+... -+++.+++.+...+.....+++..-+.-.|.. ++++.+++|.++|++||+++|+||+
T Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 260 (431)
T TIGR03251 181 DNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEV 260 (431)
T ss_pred CCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 01110 000000 12344555555444445555555445555654 6789999999999999999999999
Q ss_pred CCCCCCC
Q 018820 262 YQGFASG 268 (350)
Q Consensus 262 Y~~~~~~ 268 (350)
+.+|...
T Consensus 261 ~tG~Grt 267 (431)
T TIGR03251 261 QTGVGLT 267 (431)
T ss_pred hhccCcc
Confidence 9988543
No 363
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.42 E-value=0.0038 Score=60.29 Aligned_cols=140 Identities=16% Similarity=0.245 Sum_probs=97.6
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHH-HHhc-C----CCEEEEcCCCCCC
Q 018820 110 VKEYLP---IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFL-ARHY-H----QRTIYIPQPTWGN 180 (350)
Q Consensus 110 ~~~Y~p---~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~-~~~~-~----gd~Vlv~~P~y~~ 180 (350)
.|-|.| .+|..++...+.+|+...-. -+.|. +|-+.|.++-..+..+. +... . .++|+||+-....
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~Davs-LQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVS-LQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcC----Cceee-ccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 466777 47888888888888543211 23344 45555555543332222 2211 2 2789999999888
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
-...+..+|.+|+.|++ +++ ..+|+++|++.+..+. ..+.++||+ -.-+=++.+++|+++..++|-.+-.|-
T Consensus 170 NPASAam~G~~VV~V~~-~~~-G~VDlddLk~k~~~~~---AalMiTnPs---T~GvFE~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 170 NPASAAMAGFKVVVVKC-DEN-GNVDLDDLRAKAEDNL---AALMITNPS---TLGVFEEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred ChhhHhhcCceEEEEec-CCC-CCccHHHHHHHhccce---eEEEeccCc---ccccchhhHHHHHHHHHHcCCEEEecC
Confidence 88888999999999999 655 4699999999987543 367775554 344558899999999999999999886
Q ss_pred CC
Q 018820 261 AY 262 (350)
Q Consensus 261 aY 262 (350)
|-
T Consensus 242 AN 243 (496)
T COG1003 242 AN 243 (496)
T ss_pred cc
Confidence 53
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.41 E-value=0.038 Score=58.87 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=63.5
Q ss_pred HHHHHHhhc-----CCCCcEEEEecC-CCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 208 QGLLEDLGS-----APAGAIVLLHAC-AHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 208 ~~l~~~l~~-----~~~~~~~l~~~~-p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
+.+++.++. .+.+.+.+++-. -+.=-|+. ++++-++++.++|++||+++|+||+.-+|.--+ + ......+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG--~-~fa~e~~ 643 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG--V-ESAWELL 643 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc--c-hhhHHhc
Confidence 445555542 223334444432 25556776 478889999999999999999999999994322 1 1222222
Q ss_pred hhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHH
Q 018820 281 VADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQV 324 (350)
Q Consensus 281 ~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l 324 (350)
.-...++ .++|.++ .| +-+|.++ +. +++.+.+
T Consensus 644 -gv~PDIi---~~gKgLt-gG~~Plaa~l--~~-----~~I~~~f 676 (817)
T PLN02974 644 -GCKPDIA---CYAKLLT-GGLVPLAATL--AT-----EEVFEAF 676 (817)
T ss_pred -CCCCCEE---eeccccc-CCCCccEEEE--Ec-----HHHHHhh
Confidence 1112344 3689998 88 5899877 65 4555544
No 365
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=97.27 E-value=0.012 Score=56.34 Aligned_cols=240 Identities=17% Similarity=0.162 Sum_probs=121.9
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEee-cccccCCCCCccccHHHHHHHHHHhhcCCCCCCC-CCCCCcHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLG-VGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEY-LPIVGLAEFN 123 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~-~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y-~p~~G~~~lr 123 (350)
|..|..|-+.. .+|-+...|.+.. .+.+... ...|......|-+.+++.+++++.....+....- +...-..+|-
T Consensus 146 YRvFk~vNRlA--~~fP~A~~~se~t-~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE 222 (570)
T KOG1360|consen 146 YRVFKNVNRLA--KEFPLAHRYSEAT-EKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLE 222 (570)
T ss_pred hHHHHHHhHhh--hhccchhhccccc-cCceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHH
Confidence 33444444433 1233444444322 2334443 3345333444555555555555543111111111 1122235677
Q ss_pred HHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcCCeEEEEEeecC
Q 018820 124 KLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAGLSVKSYRYYDP 200 (350)
Q Consensus 124 ~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~ 200 (350)
+.+|++.... .-.++ .+.--|.......++...||-.|+-.. .||..++. ..+++-+- . .
T Consensus 223 ~eLA~LHqK~-------aALlF---sSCfVANDstLftLak~lpgcei~SD~---gNHASMI~GIrns~v~K~I--F-r- 285 (570)
T KOG1360|consen 223 AELADLHQKE-------AALLF---SSCFVANDSTLFTLAKKLPGCEIFSDE---GNHASMIQGIRNSRVPKHI--F-R- 285 (570)
T ss_pred HHHHHHhcCc-------ceeee---eeeeeccchHHHHHHHHCCCcEEeccc---cchHHHHHHhhhcCCccee--e-c-
Confidence 8888875322 11221 111112211112234456876665433 35665554 33332222 2 1
Q ss_pred CCCCCCHHHHHHHhhcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 201 ATRGLNFQGLLEDLGSA-PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
.-|++.|++.++.. +..+.++-.-.-|.=+|.+-+.| +|.+++.++|.+-+.||+..-=.||+ ..+ -+..
T Consensus 286 ---HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple---elcDvah~yGAiTFlDEVHAVGlYG~--rGa-Gvge 356 (570)
T KOG1360|consen 286 ---HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE---ELCDVAHKYGAITFLDEVHAVGLYGP--RGA-GVGE 356 (570)
T ss_pred ---cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH---HHHHHHHHhCceeeeehhhhhccccC--CCC-Cccc
Confidence 23788899988764 33455777778899999998865 55899999999999999986544442 110 0000
Q ss_pred HhhcC--C-cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHH
Q 018820 280 FVADG--G-ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVES 322 (350)
Q Consensus 280 ~~~~~--~-~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~ 322 (350)
.+| + -=|+.+++.|.||.-| ||+. + +.++.+-+++
T Consensus 357 --rdGvm~kvDiIsGTLgKafGcVG---GYIA--a-t~~LvDmiRS 394 (570)
T KOG1360|consen 357 --RDGVMHKVDIISGTLGKAFGCVG---GYIA--A-TRKLVDMIRS 394 (570)
T ss_pred --cCCcchhhhhcccchhhhccccc---ceeh--h-hhhHHHHHHH
Confidence 011 1 2366889999998655 7655 4 3434444443
No 366
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.03 E-value=0.004 Score=60.55 Aligned_cols=193 Identities=14% Similarity=0.190 Sum_probs=118.8
Q ss_pred CCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---Hh
Q 018820 55 APEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---IL 131 (350)
Q Consensus 55 ~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~ 131 (350)
.|++.++.+.+.+..-.+....++..|.. ..+++-....+.++...+. +-....| .+..++-+++..+ ++
T Consensus 61 l~~d~v~~~i~~~~~ld~~~~~~~vS~~v--~~~~~~~~~l~~~~~~k~N--~l~~d~f---p~~~~~e~~~Vnm~~~L~ 133 (491)
T KOG1383|consen 61 LPKDAVLELINDELMLDGNPRLGLASGVV--YWGEPELDKLIMEAYNKFN--PLHPDEF---PVVRKLEAECVNMIANLF 133 (491)
T ss_pred CCHHHHHHHHHHHhccCCCcccCeeeEEE--ecCCcchhhHHHHHHhhcC--ccCcccc---chhHHHHHHHHHHHHHHh
Confidence 56667777776654322223455555544 1122333444444444431 2222234 3455666666555 45
Q ss_pred CCCCCCccCCcEEEEecCCchhHHHHHHHHHH---HhcCC---CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 132 GADSPAIRENRVTTVQCLSGTGSLRVGAEFLA---RHYHQ---RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 132 g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~---~~~~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+.+ ++ .+-..|.|+++++..+..--. ....| ..++.+.-.-..+....+-.+++++.||+ ++.++.+
T Consensus 134 ~~~-----~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~-~~~~~~~ 206 (491)
T KOG1383|consen 134 NAP-----SD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPL-DEGDYRV 206 (491)
T ss_pred cCC-----cc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeec-cccceEe
Confidence 543 22 333458899999544321111 11112 23444443444455556678889999999 8778999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh-cCcEEEEccCCCCCCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS-KGLLPFFDSAYQGFAS 267 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~DeaY~~~~~ 267 (350)
|+..+.+.+.+++. .++..-|+-|+|. -+..++|.+++.+ +++.+-.|.+-.+|.-
T Consensus 207 D~~k~~~~i~eNti---~lv~~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 207 DPGKVVRMIDENTI---MLVGSLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred cHHHHHHHhccceE---EEEEEcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCccccc
Confidence 99999999987665 7777779999995 5677888999988 9999999999888874
No 367
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=96.96 E-value=0.058 Score=51.66 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=97.0
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCC--CEEEEcCCCCCChHHHHHHcCCeEEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ--RTIYIPQPTWGNHPKVFTLAGLSVKSYR 196 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g--d~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 196 (350)
..+|-++++..+-+. -+.+.+ +++|++|..++..+ ++..-| |.|..-+-...+....+...|......+
T Consensus 94 i~~~Ae~L~s~~P~~------l~~vfF--~nsGsEANelal~m-ar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~ 164 (442)
T KOG1404|consen 94 IHDLAEALVSKLPGD------LKVVFF--VNSGSEANELALKM-ARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQN 164 (442)
T ss_pred HHHHHHHHHHhCCCC------ceEEEE--ecCCchHHHHHHHH-HHHhcCCceEEEeeccccCCchhhcccccCCccccc
Confidence 456777776664222 345777 99999999997544 444433 5455544333444444444444433322
Q ss_pred eec----------CC---C-CCCC-----HH----HHHHHhhcC-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHh
Q 018820 197 YYD----------PA---T-RGLN-----FQ----GLLEDLGSA-PAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRS 251 (350)
Q Consensus 197 ~~~----------~~---~-~~~d-----~~----~l~~~l~~~-~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~ 251 (350)
+.. ++ + |+=+ -+ .+++.+... +...+.++.-.-+---|+ .+++--+++..++|++
T Consensus 165 ~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k 244 (442)
T KOG1404|consen 165 FPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRK 244 (442)
T ss_pred CCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHH
Confidence 200 00 0 1111 22 233333322 333333332222222233 3567788999999999
Q ss_pred cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 252 KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 252 ~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+|.+.|.||+-.+|..-+ ..|. |... +-+==+.+++|.+| .|+-+|.++ +.
T Consensus 245 ~Ggl~IaDEVqtGfGRtG---~~wg---fe~h-~v~PDIvTmAKgiG-nG~Pl~AVv--tt 295 (442)
T KOG1404|consen 245 RGGLFIADEVQTGFGRTG---HMWG---FESH-GVVPDIVTMAKGIG-NGFPLGAVV--TT 295 (442)
T ss_pred cCCEEEehhhhhcccccc---cccc---cccc-CCCccHHHHHhhcc-CCCcceeee--cC
Confidence 999999999988886532 1121 2111 11112568899999 999999877 55
No 368
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=96.90 E-value=0.0029 Score=60.41 Aligned_cols=163 Identities=16% Similarity=0.240 Sum_probs=35.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC---C---CChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT---W---GNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~---y---~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
+..++ ++....|+.++. ..+.+|.+|+++.=- + +....+++..|+++++|-. .. .-.+++.++++
T Consensus 63 eaA~V--vNnnaAAv~L~l---~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGt-tN---~t~~~Dye~AI 133 (367)
T PF03841_consen 63 EAALV--VNNNAAAVLLAL---NTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGT-TN---RTHLSDYEKAI 133 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccc--cccccccccccc---ccccccccccccccccccccccccccccccccccccccccc-cc---ccccccccccc
Confidence 34445 666666776632 223456667765321 1 1245677889999999866 22 34566788888
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC----CCCCCCchHHHHHHhhcCCcEEEE
Q 018820 215 GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA----SGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~----~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
.+++. .++.+|++-+.=.|.+=.. .++++++++++|++.+++|-.=..+. ++ + .+.+.++.+...|.. +++
T Consensus 134 ~e~Ta-~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g-l-~~Ep~v~~~~~~GaD-lV~ 208 (367)
T PF03841_consen 134 TENTA-ALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYG-L-PDEPTVQEYLAAGAD-LVT 208 (367)
T ss_dssp -----------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT------------CCCCT-S-EEE
T ss_pred ccccc-ccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCccccc-C-ccccHHHHHhhcCCC-EEE
Confidence 77664 3344553333334444333 57888999999999999997542211 11 1 111334444444444 457
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+|=-|-+| |=..|.++ +. +.+++++++
T Consensus 209 fSGdKlLG--GPQaGiI~--Gk-----k~lI~~lk~ 235 (367)
T PF03841_consen 209 FSGDKLLG--GPQAGIIV--GK-----KELIEKLKK 235 (367)
T ss_dssp EETTSSSS--S-S-EEEE--EE-----HHHHHHHHH
T ss_pred EECCCcCC--CCCeEEEE--eC-----HHHHHHHhh
Confidence 77899987 55579655 54 445554443
No 369
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=96.90 E-value=0.061 Score=53.80 Aligned_cols=126 Identities=8% Similarity=0.060 Sum_probs=76.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc------------------------CC---CEEEEcCCCCCChHHH-HHHcCCe
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY------------------------HQ---RTIYIPQPTWGNHPKV-FTLAGLS 191 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~------------------------~g---d~Vlv~~P~y~~~~~~-~~~~G~~ 191 (350)
-++|.+ +++|++|...+..+..... .| .+|+...-+|.+.... +...|-.
T Consensus 122 ~~~v~f--~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~ 199 (464)
T TIGR00699 122 QDQVWT--GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSK 199 (464)
T ss_pred cCEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCc
Confidence 368888 9999999988765542220 11 2688888888665432 2222211
Q ss_pred -----------EEEEEeecCC-CC-----------CCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHH
Q 018820 192 -----------VKSYRYYDPA-TR-----------GLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQ 247 (350)
Q Consensus 192 -----------~~~v~~~~~~-~~-----------~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~ 247 (350)
+..+|+.... .+ .-+++.+++.+.+.....+++++-.-..-.|..+ +++-+++|.+
T Consensus 200 ~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~ 279 (464)
T TIGR00699 200 PIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRD 279 (464)
T ss_pred cccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 1111210000 00 0135566677764433344555544444557665 7899999999
Q ss_pred HHHhcCcEEEEccCCCCCCC
Q 018820 248 LMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 248 ~~~~~~~~ii~DeaY~~~~~ 267 (350)
+|++||+++|+||+.-+|..
T Consensus 280 lc~~~g~lLI~DEV~tGfGr 299 (464)
T TIGR00699 280 ITKKHNVAFIVDEVQTGVGA 299 (464)
T ss_pred HHHHcCCEEEEeeeeeCCCC
Confidence 99999999999999988854
No 370
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.85 E-value=0.0064 Score=58.51 Aligned_cols=164 Identities=14% Similarity=0.083 Sum_probs=88.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHh--cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee-cCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARH--YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~ 217 (350)
+..++ .+.+|+.- +...|+++- ..++.|+.+.-.--.....+..+|++++.|+.. +++....|.+.+++.+++.
T Consensus 75 ~~~~~--vP~atgm~-l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~ 151 (389)
T PF05889_consen 75 KSCFV--VPMATGMS-LTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL 151 (389)
T ss_dssp CEEEE--ESS-HHHH-HHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH
T ss_pred cceEE--EecccccH-HHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh
Confidence 34455 66666443 222344432 356777766442222334456789999999853 3444556788888888765
Q ss_pred CCCcEEEEecCCCCCCCCCCCH-HHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 218 PAGAIVLLHACAHNPTGVDPTL-QQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
.+..++.+++.. ++..+.. ++.++|+++|+++|+..|...||.--... -...+......|.--++++|.-|+
T Consensus 152 G~~~iLcvlttt---scfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~----~~~~i~~a~~~GRvda~vqS~dkN 224 (389)
T PF05889_consen 152 GADNILCVLTTT---SCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSK----CMHLIQQAWRVGRVDAFVQSTDKN 224 (389)
T ss_dssp CGGGEEEEEEES---STTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HH----HHHHHHHHHHHSTCSEEEEEHHHH
T ss_pred CCCCeEEEEEec---CccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHH----HHHHHHHHHhcCCcceeeeecCCC
Confidence 444445454332 2233333 35999999999999999999999643210 001122222233334689999999
Q ss_pred cCccCcceeEEEEeeCChhHH
Q 018820 297 LGLYGERVGALSIVCKTADVA 317 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~ 317 (350)
| +-+..=+-+. ++++..+
T Consensus 225 F-~VPvGgai~A--s~~~~~i 242 (389)
T PF05889_consen 225 F-MVPVGGAIMA--SFDPSGI 242 (389)
T ss_dssp H-CEESSHEEEE--ESSHHHH
T ss_pred E-EecCCCcEEE--ecCHHHH
Confidence 9 4555544333 6665433
No 371
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=96.56 E-value=0.015 Score=56.29 Aligned_cols=145 Identities=14% Similarity=0.070 Sum_probs=81.8
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEec-CCchhHHHHHHHHHHHhcCCCEEEEcCCCCC-ChHHHHHHc--CCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQC-LSGTGSLRVGAEFLARHYHQRTIYIPQPTWG-NHPKVFTLA--GLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t-~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~~~~--G~~~~~ 194 (350)
..+.|+.+++++ +.. . ..+|++ + .++|.++..++ ..++.+ +.+.+.+=.|. .+....+.. +.+++.
T Consensus 43 ~~~~r~~l~~l~-~~~-~---~~~v~f--~~gs~T~a~~~~~--~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~ 112 (361)
T TIGR01366 43 VGRVREGLAELF-SLP-D---GYEVIL--GNGGATAFWDAAT--FGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPII 112 (361)
T ss_pred HHHHHHHHHHHh-CCC-C---CceEEE--ECCchhHHHHHHH--Hhcccc-cccEEecCHHHHHHHHHHHhhhccCCceE
Confidence 455666676664 431 1 346776 6 55999998843 343332 33344343332 233344431 236666
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++. +. +..++. .+..+++ ++.++...|-||+..+.+++ ++++|+++|+|.+=. +....+ |
T Consensus 113 ~~~-~~-~~~~~~-----~~~~~~~---lV~~~h~et~tG~~~pi~~I------~~~~g~~~iVDavqs-~g~~~i--d- 172 (361)
T TIGR01366 113 VTA-DP-GSAPEP-----QADPGVD---VIAWAHNETSTGVAVPVRRP------EGSDDALVVIDATSG-AGGLPV--D- 172 (361)
T ss_pred Eec-CC-CCCCCC-----ccCCCCC---EEEEcccCCccceecccccc------cccCCCeEEEEcCcc-ccCCCC--C-
Confidence 665 32 222332 2222233 77777889999999997654 478999999997532 222211 1
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccC
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
+.. -. +++.|--|.+|.+|
T Consensus 173 --v~~-----~D-~~~~s~~K~lg~~~ 191 (361)
T TIGR01366 173 --IAE-----TD-VYYFAPQKNFASDG 191 (361)
T ss_pred --HHH-----CC-EEEEEchhhcCCCC
Confidence 111 12 46788999998774
No 372
>PLN02452 phosphoserine transaminase
Probab=96.41 E-value=0.29 Score=47.40 Aligned_cols=137 Identities=13% Similarity=0.008 Sum_probs=70.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCC-CCCC-hHHHHHHcCCeEEEEEee-cCCCCCCCHHHHHHHhhcCC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQP-TWGN-HPKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P-~y~~-~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~ 218 (350)
+|++ ...||+.++.. ..+.++.+|+++++..- .|.. ....++..|...+..... ...+..++++.+ +..+
T Consensus 72 ~v~~-l~Gsgt~~~ea--~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~ 144 (365)
T PLN02452 72 EVLF-LQGGASTQFAA--IPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTP 144 (365)
T ss_pred eEEE-EeCccHHHHHH--HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCC
Confidence 4544 35677888877 44555678887776544 3332 245667788643333210 111124565553 2222
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
. ...+.++...-.||+.+.. +.++. ++++|+|.+=. +.... ..+.. ..+++ .|.-|++|
T Consensus 145 ~-~~~v~~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss-~g~~p-----idv~~-----~~v~~-~saqK~lG 203 (365)
T PLN02452 145 D-AKFVHICANETIHGVEFKD--YPDVG------NVPLVADMSSN-FLSKP-----VDVSK-----YGVIY-AGAQKNVG 203 (365)
T ss_pred C-CcEEEECCCCCCCcEecCc--ccccC------CCeEEEECCcc-ccCcc-----cCHHH-----cCEEE-EecccccC
Confidence 2 2244444334478885432 33332 37888997432 22111 11111 23444 59999999
Q ss_pred ccCcceeEEE
Q 018820 299 LYGERVGALS 308 (350)
Q Consensus 299 l~G~RvG~l~ 308 (350)
-+| +|.++
T Consensus 204 P~G--l~~v~ 211 (365)
T PLN02452 204 PSG--VTIVI 211 (365)
T ss_pred CCC--eEEEE
Confidence 888 56544
No 373
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.38 E-value=0.22 Score=48.36 Aligned_cols=153 Identities=17% Similarity=0.249 Sum_probs=90.6
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC-----Cc----HHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV-----GL----AEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~-----G~----~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
--+|.|.| + ...+++|.+ .+.+++.+...|.|.| |. -+|...++++ .|-+.. |-..
T Consensus 78 sfiG~GyY-~----~~~P~vI~r---nile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL-TGm~VA-----NASm- 142 (450)
T COG0403 78 SFIGAGYY-D----TYTPPVILR---NILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL-TGLDVA-----NASM- 142 (450)
T ss_pred hhccCccc-C----CcCcHHHHH---HhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHH-hCCCcc-----cchh-
Confidence 35678888 4 344566653 2333466667788743 32 2233334443 455432 2222
Q ss_pred ecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 147 QCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
--++|.+-.... +.....+ ..+|+++.-+++.+..+++ -.|++++.+++ + |.+.+++. .. ..
T Consensus 143 -~DeaTAaAEAm~-ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~-~------d~~~l~~~-~~--~~ 210 (450)
T COG0403 143 -LDEATAAAEAML-MAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA-D------DLDDLESA-DD--GD 210 (450)
T ss_pred -hhhHHHHHHHHH-HHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc-c------hhhhhhhc-cc--cC
Confidence 345554444422 2222333 5899999999999999987 35677777766 2 66666665 22 12
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
...+++ ++|...=...+++++|.+.+++++.++++
T Consensus 211 ~~gv~v---QyP~~~G~~~~d~~~l~~~~h~~~al~~v 245 (450)
T COG0403 211 VFGVLV---QYPNTFGIVEEDLRALIEAAHSAGALVIV 245 (450)
T ss_pred eEEEEE---ecCCCCCccchhHHHHHHHHhhcCCEEEE
Confidence 335555 44544445667899999999999877764
No 374
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.29 E-value=0.12 Score=50.87 Aligned_cols=152 Identities=14% Similarity=0.187 Sum_probs=77.3
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHH------HhCCCCCCccCCcEEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVG--LAEFNKLSAKL------ILGADSPAIRENRVTT 145 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G--~~~lr~aia~~------~~g~~~~~~~~~~v~~ 145 (350)
..--++.|.+ + -.+++++.+. +...+.....|.|.+- ..-..|++-+| +.|-+. -|...
T Consensus 66 ~~~fiG~G~y-~----~~~P~~i~~~---i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdv-----aNaSl 132 (429)
T PF02347_consen 66 YTSFIGAGSY-T----HYVPAVIDRN---ILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDV-----ANASL 132 (429)
T ss_dssp TTS---CTTT----------HHHHH----HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSE-----E-SEB
T ss_pred CCcccccccc-C----ceeChhhcCc---cccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCc-----cCCCC
Confidence 4455688888 4 3345555551 2222344455666321 12233333333 345532 12232
Q ss_pred EecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 146 VQCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
-.|++.+-..+. +...... +++|+++.-.++.+..+++ ..|++++.++. ++++ ..| .+
T Consensus 133 --yd~atA~aEa~~-ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~-~~~~-~~d-----------~~ 196 (429)
T PF02347_consen 133 --YDGATAAAEAML-MAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL-DEDG-TTD-----------DD 196 (429)
T ss_dssp --SSCCHHHHHHHH-HHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B-BTTC-SB------------ST
T ss_pred --CChhHHHHHHHH-HHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc-cccC-Ccc-----------cc
Confidence 445655554432 2222333 3599999999999988665 47899999998 5432 233 23
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
+...+++.+|| =.|..-+ .++|.++++++|.+++.
T Consensus 197 ~~a~v~vq~Pn-~~G~~ed---~~~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 197 DTAAVMVQNPN-TFGVFED---IKEIADIAHAAGALVIV 231 (429)
T ss_dssp TEEEEEEESS--TTSB--T---HHHHHHHHHHTT-EEEE
T ss_pred CeEEEEeecCC-CCceEee---HHHHHHHHHHcCCEEEE
Confidence 45577777776 4555443 88999999999988775
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.28 E-value=0.17 Score=54.56 Aligned_cols=147 Identities=14% Similarity=0.188 Sum_probs=89.5
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC-----Cc----HHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV-----GL----AEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~-----G~----~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.-++.|.| + -..+++|.+... +.+.....|.|.| |. -+|++.++++ .|.+ ..|..+
T Consensus 67 ~fig~G~y-~----~~~p~~i~r~v~---~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eL-tGm~-----~aNaSl- 131 (939)
T TIGR00461 67 SYIGMGYY-G----TILPPVIQRNLL---ENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDL-TGLP-----VANASL- 131 (939)
T ss_pred ccCCCCcC-C----CcCChHHHHHHH---hCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHH-HCCC-----hhhhhc-
Confidence 44578877 3 234555654322 2344455676644 43 2344444444 4544 345555
Q ss_pred ecCCchhHHHHHHHHHHH-hc--CCCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 147 QCLSGTGSLRVGAEFLAR-HY--HQRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~-~~--~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
..+++.+...+ +++. .. ++++|++++-.+|.+..+++ ..|++++.+++ +.+++.+
T Consensus 132 -~d~atA~aEa~--~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~----- 193 (939)
T TIGR00461 132 -LDEGTAAAEAM--ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV----- 193 (939)
T ss_pred -cchhhHHHHHH--HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC-----
Confidence 66666666542 2232 22 34789999999999887776 77888888744 2344433
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
....+++.+| |=+|.+. ++++|+++++++|.+++.+
T Consensus 194 ~~~~v~~q~P-n~~G~ie---d~~~i~~~~h~~gal~~~~ 229 (939)
T TIGR00461 194 DVFGCLLQYP-ATDGSIL---DYKQLIDALHSHKSLVSVA 229 (939)
T ss_pred CEEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEE
Confidence 1235666665 4677765 6889999999999998874
No 376
>PLN02672 methionine S-methyltransferase
Probab=96.23 E-value=0.15 Score=55.66 Aligned_cols=213 Identities=14% Similarity=0.062 Sum_probs=131.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHH----HHHhcCCCEEEEcCCCCCChHHHH
Q 018820 110 VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEF----LARHYHQRTIYIPQPTWGNHPKVF 185 (350)
Q Consensus 110 ~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l----~~~~~~gd~Vlv~~P~y~~~~~~~ 185 (350)
..-|-|+.|...||+.+|.++.--...++.+++|++ .++-..|+..+..+ ++.++.+.+-.+| +.|-.-..+-
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 495 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKWLTSLAIE 495 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHHHhHhhhh
Confidence 356889999999999999995443444577999999 88888888554332 3444455444443 2332222221
Q ss_pred HHcCC----eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccC
Q 018820 186 TLAGL----SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 186 ~~~G~----~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
..... ..++|-- .+. . .+.+.+.+++-++ .+++..-.+ +-..|....+.|++.+++.|.+++.|+.
T Consensus 496 ~~~~~~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 496 NATSDSKSDDVITVIE-APR--Q--SDLVIELIKKLKP--QVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred cccccCccCCeEEEEe-CCC--c--chHHHHHHHhCCC--eEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 10011 1222211 121 1 2245566655333 255544333 4456778899999999999999999985
Q ss_pred -CCCCCCCCCCCchHHHHHHhh--cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChh
Q 018820 262 -YQGFASGSLDSDAQSVRMFVA--DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIH 338 (350)
Q Consensus 262 -Y~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 338 (350)
|.++.... ...--+..++. ...+..++.++-||--.+.+-|.+++ .-+ +.+...+.+...-++++....
T Consensus 566 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~ 637 (1082)
T PLN02672 566 DHLELSSLP--GSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVI--SEN----EAVLKALSKTGEVLEGRTAII 637 (1082)
T ss_pred hheeeccCC--CcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEe--cCc----HHHHHHHHHHHHhhccchHHH
Confidence 44454431 22123334432 23378888999999888999999877 544 356666667777777888888
Q ss_pred HHHHH
Q 018820 339 GASIV 343 (350)
Q Consensus 339 ~q~i~ 343 (350)
+|.--
T Consensus 638 ~~~~~ 642 (1082)
T PLN02672 638 SQFYY 642 (1082)
T ss_pred HHHHH
Confidence 88643
No 377
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.00 E-value=0.12 Score=50.43 Aligned_cols=192 Identities=16% Similarity=0.190 Sum_probs=100.7
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..++-+.+|+++ |. ++-+++-+.-| |-++. +-.++.||.-|+--.-.......=++..|+.++.+..
T Consensus 184 hkelE~l~A~f~-g~------e~a~vF~mGf~-TNs~~----~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH- 250 (519)
T KOG1357|consen 184 HKELEELVARFL-GV------EDAIVFSMGFA-TNSMN----IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRH- 250 (519)
T ss_pred HHHHHHHHHHhc-CC------cceEEEecccc-ccccC----cceeecCCcceeeccccchheeccccccCceEEEEec-
Confidence 345666667764 44 55666622222 22222 2234677766655444444444446677888877766
Q ss_pred cCCCCCCCHHHHHHHhhc-------C---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 199 DPATRGLNFQGLLEDLGS-------A---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~-------~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
+ |...|++.+++ + +-++++++.-.--.=-|. ...+.+++.++|++..+++.||+..-=+-+
T Consensus 251 N------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~---iv~Lp~vvalkkkykayl~lDEAHSiGA~g 321 (519)
T KOG1357|consen 251 N------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT---IVDLPEVVALKKKYKAYLYLDEAHSIGAMG 321 (519)
T ss_pred C------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe---ecccHHHHHhhccccEEEEeeccccccccC
Confidence 1 34445555443 1 222334443221112222 235678899999999999999998754432
Q ss_pred CCCCchHHHHHHh--hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh---hcccccCCChhHHHHH
Q 018820 269 SLDSDAQSVRMFV--ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV---IRPMYSNPPIHGASIV 343 (350)
Q Consensus 269 ~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~i~ 343 (350)
. .-...-.+. +..+--|.++.|+|+||..| ||+. ++ +++++.+..- .....+.+|...|.+.
T Consensus 322 ~---tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyia--gs-----k~lid~lrt~s~~~~yat~~sppvaqq~~ 388 (519)
T KOG1357|consen 322 A---TGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIA--GS-----KELIDYLRTPSPSALYATSLSPPVAQQIL 388 (519)
T ss_pred C---CCcceeeccCCCchhheeecceehhhccccc---ceec--Cc-----HHHHhhhccCCCceeecccCChHHHHHHH
Confidence 1 001111111 11224677889999998666 6544 44 3444433322 2222345555566554
Q ss_pred HH
Q 018820 344 AA 345 (350)
Q Consensus 344 ~~ 345 (350)
..
T Consensus 389 ss 390 (519)
T KOG1357|consen 389 TS 390 (519)
T ss_pred HH
Confidence 43
No 378
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=95.76 E-value=0.45 Score=46.07 Aligned_cols=189 Identities=14% Similarity=0.065 Sum_probs=96.9
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHH------HhCCCCCCccCCcEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS---RVKEYLPIVGLAEFNKLSAKL------ILGADSPAIRENRVT 144 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~---~~~~Y~p~~G~~~lr~aia~~------~~g~~~~~~~~~~v~ 144 (350)
+.+||+.|-. ..+.++++++.+.+.+-+. ...+. ..-.++|++.+.+- +++.+. ..+|+
T Consensus 4 ~~~nF~aGPa------~lp~~Vl~~~~~~~~~~~~~g~si~ei--sHRs~~F~~i~~~~~~~Lr~Ll~~P~----~y~Vl 71 (364)
T PRK12462 4 NQLNFSGGPG------ALPDTVLEQVRQAVVELPETGLSVLGM--SHRSSWFSSLLAQAEADLRDLLGIPD----EYGVV 71 (364)
T ss_pred ccceecCCCc------CCCHHHHHHHHHHHhcccccCcccccc--ccccHHHHHHHHHHHHHHHHHhCCCC----CCeEE
Confidence 3677877743 4457888888877763122 11111 11234555444433 455421 23555
Q ss_pred EEecCCchhHHHHHHHHHHHhcCCCEE--EEcCCCCCCh-HHHHHHcCCeEEEEEeecCC--CCCCCHHHHHHHhhcCCC
Q 018820 145 TVQCLSGTGSLRVGAEFLARHYHQRTI--YIPQPTWGNH-PKVFTLAGLSVKSYRYYDPA--TRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 145 ~~~t~G~~~al~l~~~l~~~~~~gd~V--lv~~P~y~~~-~~~~~~~G~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~ 219 (350)
+ ...|||+++.. ..+.++.+||++ ++.+=.|..- ...++..| ++..+...... +..++.+.+ +..++
T Consensus 72 f-l~GggT~~~ea--~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~~~d 143 (364)
T PRK12462 72 F-LQGGSSLQFSM--IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DWDAR 143 (364)
T ss_pred E-EeccHHHHHHH--HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----ccCCC
Confidence 5 35568888877 445667788855 4555555432 44555666 54443210111 123444443 22222
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
...+.++.-.-.||+..+ ++.+.++.++|+|.+=.-+. ..+ .+..+ =++..|.=|++|-
T Consensus 144 -~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~s-~pi-----d~~~~------dvi~agsQKnlgP 202 (364)
T PRK12462 144 -APFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDFMS-RPF-----DVEAY------GMVYAHAQKNLGP 202 (364)
T ss_pred -CcEEEEccCCCCceEecC--------cccccCCCeEEEEcCchhhC-CCC-----ChHHc------cEEEeeccccCCC
Confidence 223433322337788775 23334688999997533222 111 11111 3556778999997
Q ss_pred cCcc
Q 018820 300 YGER 303 (350)
Q Consensus 300 ~G~R 303 (350)
||+-
T Consensus 203 ~Glt 206 (364)
T PRK12462 203 AGVT 206 (364)
T ss_pred CceE
Confidence 7664
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=95.69 E-value=0.017 Score=56.19 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=71.5
Q ss_pred EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 018820 170 TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIR 246 (350)
Q Consensus 170 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~ 246 (350)
.+++++-+....+..+...|++++.++. ++ +++++.+.|.+++++. .-.+.+++. +-=|-.+-.-+++.+|.
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~t-d~-n~~mr~~~L~~AIe~D~arGlIPf~v~a---t~GTT~~ca~D~l~elg 258 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPT-DE-NFGMRGDTLRKAIEEDIARGLIPFFVCA---TLGTTSSCAFDELEELG 258 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeec-cc-CcCCCHHHHHHHHHHHHhCCCccEEEEE---eecCccccccccHHHhc
Confidence 4677888888888888889999999988 55 7999999999998863 222333332 32333344567899999
Q ss_pred HHHHhcCcEEEEccCCCCCCCC
Q 018820 247 QLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 247 ~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
.+|+++++|+-+|.+|.+-++.
T Consensus 259 ~Vc~~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 259 PVCREEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred chhhhcCEEEEeehhhcccccc
Confidence 9999999999999999975553
No 380
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=95.48 E-value=0.2 Score=47.68 Aligned_cols=141 Identities=9% Similarity=0.132 Sum_probs=95.9
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHH-HH--hcCCCEEEEc-CCCCCChHHHHH
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFL-AR--HYHQRTIYIP-QPTWGNHPKVFT 186 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~-~~--~~~gd~Vlv~-~P~y~~~~~~~~ 186 (350)
..|+...+.-.|.+++.+. +|- +.++- |+-|.+|-++..-.+ +. ..||.+..++ +-.|.......+
T Consensus 73 EAYagsrs~~~L~~avkdi-fGf-------q~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDI-FGF-------QYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHh-cCc-------eeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 4588888999999999776 553 23333 776776665532222 11 1256555444 444555666777
Q ss_pred HcCCeEEEEEeecC---C-----CCCCCHHHHHHHhhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 187 LAGLSVKSYRYYDP---A-----TRGLNFQGLLEDLGSAPA--GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 187 ~~G~~~~~v~~~~~---~-----~~~~d~~~l~~~l~~~~~--~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
.+|+.++.++..+. + ...+|++.+++.+.+... .+.+++.-..|---|.-.|-+.+++..++|+++++.+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipv 222 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPV 222 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcE
Confidence 88998888776211 1 246899999999887432 2334444444667788999999999999999999999
Q ss_pred EEccC
Q 018820 257 FFDSA 261 (350)
Q Consensus 257 i~Dea 261 (350)
+.|.+
T Consensus 223 v~Da~ 227 (471)
T COG3033 223 VMDAA 227 (471)
T ss_pred Eeehh
Confidence 99976
No 381
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=95.38 E-value=0.49 Score=44.55 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=70.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh--cCCCEEEEcCC-CCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHH
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH--YHQRTIYIPQP-TWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~--~~gd~Vlv~~P-~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~ 212 (350)
++++++ +.+.+--+.- .+.+.+ .+|++|++++- +|+.-..++ +..|.. +.+ . ..+.++++++
T Consensus 93 ~~Evvv--~dtts~nl~k--~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~---~-~~~~P~~~~~ 161 (407)
T COG3844 93 AGEVVV--TDTTSINLFK--VLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL---E-GVIAPRALEE 161 (407)
T ss_pred CCceEE--eCCcchHHHH--HHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc---e-eeeChHHHHH
Confidence 778888 7666555532 233333 36888888754 444433333 333332 222 1 2345677888
Q ss_pred HhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 213 DLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 213 ~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++.. ...+++++.-+--||..+. +.+|-+++.+++++++.|-+..-
T Consensus 162 ~~~d---d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa 207 (407)
T COG3844 162 AITD---DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSA 207 (407)
T ss_pred hhcc---ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhccc
Confidence 8765 3458888888889999886 46677888999999999988753
No 382
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=95.22 E-value=1.9 Score=42.65 Aligned_cols=160 Identities=14% Similarity=0.072 Sum_probs=85.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh-----cCCC-EEEEcCCCCCCh-HHHHHHcC-------------CeEEEE--Ee
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH-----YHQR-TIYIPQPTWGNH-PKVFTLAG-------------LSVKSY--RY 197 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~-----~~gd-~Vlv~~P~y~~~-~~~~~~~G-------------~~~~~v--~~ 197 (350)
-++|.+ +.||++|+..+..+.... .|.+ +++.-..+|.+- ...+...| ..+..+ |+
T Consensus 105 l~~vFf--~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~ 182 (449)
T COG0161 105 LDHVFF--TDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPY 182 (449)
T ss_pred ccEEEE--eCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCc
Confidence 478999 999999998875543221 1333 366667777432 11111111 011111 21
Q ss_pred e--cCC-C-CC----CCHHHHHHHhhcCC-CCcEEEEecCCCCC-CCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 198 Y--DPA-T-RG----LNFQGLLEDLGSAP-AGAIVLLHACAHNP-TGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 198 ~--~~~-~-~~----~d~~~l~~~l~~~~-~~~~~l~~~~p~NP-TG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
. ... + +. -..+.|++.+.... ...+.++.---.-= +|+. +++.-|+++-++|++||+++|+||+--+|.
T Consensus 183 ~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFG 262 (449)
T COG0161 183 AYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFG 262 (449)
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCC
Confidence 0 111 1 11 12556666666543 44444443322333 5654 456778999999999999999999998887
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
--+ .......+ .-.+.++ .++|.+.-.=+-+|.++
T Consensus 263 RTG---~~FA~e~~-gi~PDi~---~~aKGLT~GY~Pl~a~l 297 (449)
T COG0161 263 RTG---KMFACEHA-GIVPDIL---CLAKGLTGGYLPLSAVL 297 (449)
T ss_pred cCc---hhhhhhhc-CCCCCee---eecccccccchhhHhHh
Confidence 543 11111111 1112344 35787764445566544
No 383
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=95.19 E-value=0.75 Score=44.75 Aligned_cols=125 Identities=16% Similarity=0.132 Sum_probs=75.7
Q ss_pred ecCCchhHHHHHHHHHHHh-cCCCEEEEcCCCCCCh-H-HHHHHcCC-eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcE
Q 018820 147 QCLSGTGSLRVGAEFLARH-YHQRTIYIPQPTWGNH-P-KVFTLAGL-SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAI 222 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~-~-~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 222 (350)
.+.|||+++.. .+..++ .+|++|++.. .|..- . .+++..|+ ++..+.. +.+..+|++.++. . + .+
T Consensus 63 l~GsGT~a~Ea--a~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~-~v 131 (374)
T TIGR01365 63 VPASDTGAVEM--ALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-N-DV 131 (374)
T ss_pred ECCchHHHHHH--HHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-C-CE
Confidence 37889999987 445556 4788888865 55543 4 77888999 4666654 3455788888762 1 1 22
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
+ ++..--.||+..+.+ +++.. .++.++|+|.+=.-.. .++ .+. + -=+++.|--|++++|+
T Consensus 132 ~--~vhnETSTGv~npv~---~i~~~--~~~~lliVDavSs~g~-~~l-----~~d-----~-iDv~~tgsQK~L~~pp 191 (374)
T TIGR01365 132 V--FTWNGTTSGVRVPNG---DFIPA--DREGLTICDATSAAFA-QDL-----DYH-----K-LDVVTFSWQKVLGGEG 191 (374)
T ss_pred E--EecCCCchheecccc---ccccc--cCCCcEEEEccchhcC-CCC-----Chh-----H-CcEEEEechhccCCCC
Confidence 3 322344788888763 33321 1588999997533221 111 111 1 2355778899998754
No 384
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.45 E-value=1.1 Score=43.11 Aligned_cols=169 Identities=14% Similarity=0.063 Sum_probs=94.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhh----cCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN----DRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~----~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+.+.+||+..++...-+. .+..+++...+.. ..+...-|+...-.-.|-+.+|+++ |. ++.|+.
T Consensus 92 ~G~~~~N~aS~NfL~l~~~---~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~-G~------E~aivY- 160 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIEN---EEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM-GT------EDAIVY- 160 (467)
T ss_pred cCceeecccchhhhhhccc---HHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh-CC------cceeee-
Confidence 4668899998887443333 3333334333331 1112233777666778888999985 54 566776
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-------CC
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-------PA 219 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-------~~ 219 (350)
..|=+..-.. +-++...||.|.+-.-.-.....-++...-+++++ .. .|.+.++..+.+. ++
T Consensus 161 -s~gF~ti~S~---ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~F---kh----ndm~~lerll~E~~~~~~K~~k 229 (467)
T KOG1358|consen 161 -SYGFSTIESA---IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYF---KH----NDMEDLERLLPEQEDEDQKNPK 229 (467)
T ss_pred -ccccchhhhc---chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEe---cC----CCHHHHHHhccCcchhhhhccc
Confidence 4444332222 33557789988776544322332223222233333 22 2445554443332 12
Q ss_pred C---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 220 G---AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 220 ~---~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
+ ..+++.-----+||...+. .+|+++..++...+|.||.|+-
T Consensus 230 ~~~~Rrfiv~EGl~~N~g~i~pl---~~iv~lk~Kyk~RvildEs~Sf 274 (467)
T KOG1358|consen 230 KALTRRFIVVEGLYANTGDICPL---PEIVKLKNKYKFRVILDESLSF 274 (467)
T ss_pred cccceEEEEEEeeccCCCccccc---HHHHHHHhhheEEEEEeccccc
Confidence 1 2344443345578877764 6678888899999999998864
No 385
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.50 E-value=2.2 Score=39.14 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=81.5
Q ss_pred HHcCCeEEEE-EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC--CCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 186 TLAGLSVKSY-RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD--PTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 186 ~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~--~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
-.+|++++-+ +..+.+.-..|++.++..+++..+..++-+++. |... -+++.+++|+.+|..|++.-|+.++|
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~st----tscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHST----TSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeec----ccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 3579887665 344555556788999988888766555555432 2211 24678999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChh
Q 018820 263 QGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIH 338 (350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 338 (350)
.--.. +...-+....+-|.---+++|+-|+|-.| ||-.++ +.=+ +.+++.+.+.-...-+..|.+
T Consensus 197 glqse----e~i~~iaa~~~~grida~vqsldknf~vp---vggaii-a~fk---~n~iq~iak~ypgrasa~ps~ 261 (432)
T KOG3843|consen 197 GLQSE----ECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAII-AAFK---DNFIQEIAKMYPGRASASPSL 261 (432)
T ss_pred ccchH----HHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHh-hHhH---HHHHHHHHHhCCCccccCccH
Confidence 64332 11112222222222234579999999744 342221 2211 455555555544444444443
No 386
>PRK12566 glycine dehydrogenase; Provisional
Probab=91.69 E-value=4.1 Score=44.11 Aligned_cols=186 Identities=13% Similarity=0.195 Sum_probs=97.8
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC-----Cc----HHHHHHHHHHHhCCCCCCccCCcEE
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV-----GL----AEFNKLSAKLILGADSPAIRENRVT 144 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~-----G~----~~lr~aia~~~~g~~~~~~~~~~v~ 144 (350)
-+.-+|.|.| + ...+.+|.+. +.+.+.....|.|.| |. -+|...++++ .|-+.. |-.
T Consensus 80 ~~~fiG~G~y-~----~~~P~vi~~~---i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~L-tGm~va-----NAS 145 (954)
T PRK12566 80 WTSLIGMGYH-G----TVTPTVILRN---VLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDL-TGLDLA-----NAS 145 (954)
T ss_pred cccccccccc-C----CcCcHHHHHH---HHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHH-hCchhh-----hhh
Confidence 4567788888 4 3445566332 222355556677744 42 2333444443 454321 222
Q ss_pred EEecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 145 TVQCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 145 ~~~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
. -.++|.+-..+. +.....+ ..+|+|++-.++.+..+++ ..|++++. +.+++.+..
T Consensus 146 l--~D~atA~aEA~~-ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~-- 207 (954)
T PRK12566 146 L--LDEATAAAEAMA-LAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH-- 207 (954)
T ss_pred h--ccchhHHHHHHH-HHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC--
Confidence 2 334444333211 1111222 4689999999998888776 45666653 112222222
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh---hcCCcEEEE--ecc
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV---ADGGECFIA--QSY 293 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~---~~~~~vi~~--~S~ 293 (350)
....+++.+|+ =.|.+ +++++|+++++++|.++|. -+ |..++..+. +.|..+++= ++|
T Consensus 208 -~~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~~-~~-----------d~laL~ll~~Pge~GADI~vG~~Q~f 270 (954)
T PRK12566 208 -AVFGALLQYPD-THGEI---RDLRPLIDQLHGQQALACV-AA-----------DLLSLLVLTPPGELGADVVLGSTQRF 270 (954)
T ss_pred -CEEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEEE-Ee-----------CHHHHhCCCChhhcCCcEEeeCCCcC
Confidence 23456666664 56766 5688999999999987663 21 111221121 223345533 456
Q ss_pred ccccCccCcceeEEE
Q 018820 294 AKNLGLYGERVGALS 308 (350)
Q Consensus 294 SK~~gl~G~RvG~l~ 308 (350)
.=-+|.-|=-.||+.
T Consensus 271 Gvp~~~GGP~ag~~a 285 (954)
T PRK12566 271 GVPMGYGGPHAAYFA 285 (954)
T ss_pred CCCCCCCCCCeeeee
Confidence 656665666777766
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=91.20 E-value=4.3 Score=41.81 Aligned_cols=143 Identities=17% Similarity=0.232 Sum_probs=92.4
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhH----HHHHHHHHHHhcCC-C-EEEEcCCCCCC
Q 018820 110 VKEYLPI---VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGS----LRVGAEFLARHYHQ-R-TIYIPQPTWGN 180 (350)
Q Consensus 110 ~~~Y~p~---~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~a----l~l~~~l~~~~~~g-d-~Vlv~~P~y~~ 180 (350)
.|-|.|. +|+.++-..+-+++-..-. -|++.+ |-++|.++ +..+...+..-..| . ..++|.-....
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~-QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSL-QPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeec----ccceee-cCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCC
Confidence 4668784 5666666666555422110 234443 44444433 33332222222233 2 34567667777
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
-...+.++|.++++|.+ +.+ ..+|...|++..++....-..+.++.|. -.-+=++.++++.++..+||--|..|-
T Consensus 643 NPASA~MagmkvvpV~~-~~~-G~id~~dLk~kaekh~~~Laa~MvTYPS---T~GvfE~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGC-DAN-GNIDMVDLKAKAEKHKDNLAALMVTYPS---THGVFEEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred ChhhHHhcCCEEEEeec-cCC-CCccHHHHHHHHHHhhhhhheeEEeccc---ccccccccHHHHHHHHHhcCCEEEecC
Confidence 77778899999999998 554 4699999998888766666677776554 333446778999999999999999997
Q ss_pred CC
Q 018820 261 AY 262 (350)
Q Consensus 261 aY 262 (350)
+-
T Consensus 718 AN 719 (1001)
T KOG2040|consen 718 AN 719 (1001)
T ss_pred CC
Confidence 64
No 388
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=91.10 E-value=1.6 Score=41.22 Aligned_cols=125 Identities=16% Similarity=0.099 Sum_probs=71.4
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
|.++++..++. + ..+.+++---+--.|+++ ++.-+++..++|++|++++|.||+-.++...+ + .+.... ..-.
T Consensus 195 d~eale~~l~~-~-~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG--k-~la~d~-env~ 268 (427)
T KOG1402|consen 195 DAEALEVALKS-P-NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG--K-LLACDY-ENVR 268 (427)
T ss_pred CHHHHHHHhcC-C-CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC--c-EEEeeh-hhcC
Confidence 68889998876 2 233444444455666554 46678999999999999999999988876543 1 111100 1111
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHH
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
..+|. |.|.++-.=+-+..++ +. +.+...++-........-++++.+++...
T Consensus 269 PDivi---lgKalSGG~~Pvsavl--~~-----~~im~~~~pgeHgsTyggNpLg~~vaiAa 320 (427)
T KOG1402|consen 269 PDIVI---LGKALSGGVYPVSAVL--AD-----DDIMLNIKPGEHGSTYGGNPLGCAVAIAA 320 (427)
T ss_pred CCeEE---EeccccCCeeeeEEEE--ec-----HHHHhccCCCccccccCCChHHHHHHHHH
Confidence 23444 3577752224555544 65 45655554443333334455565554443
No 389
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=90.42 E-value=0.56 Score=45.62 Aligned_cols=116 Identities=17% Similarity=0.107 Sum_probs=72.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc--CC----------CEEE-EcCCCCCChHHHHHHcC---CeEEEEEeecCCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY--HQ----------RTIY-IPQPTWGNHPKVFTLAG---LSVKSYRYYDPATR 203 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~--~g----------d~Vl-v~~P~y~~~~~~~~~~G---~~~~~v~~~~~~~~ 203 (350)
.+.|. ++||.-+...+ ...++.. |+ +-|+ +++-+.......+...| -.++.|+. ++. .
T Consensus 160 ~DgIf---~pggsisn~Ya-~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t-~e~-G 233 (510)
T KOG0629|consen 160 GDGIF---APGGSISNMYA-MNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT-DER-G 233 (510)
T ss_pred CCcee---cCCchhHHHHH-HHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc-ccc-C
Confidence 46676 77776555332 2223322 32 3344 33444444555666667 46788877 554 4
Q ss_pred CCCHHHHHHHhhcCCCC---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 204 GLNFQGLLEDLGSAPAG---AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 204 ~~d~~~l~~~l~~~~~~---~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
.+++++|++.+..+..+ + +++.++. =|-+.=.-+.+..|+++|++|++|+-+|-||.+
T Consensus 234 km~~~dLe~kile~k~kg~~P-f~vnaTa--GTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGG 294 (510)
T KOG0629|consen 234 KMIPDDLEKKILEAKAKGGVP-FFVNATA--GTTVLGAFDDLNGIADICEKHKLWMHVDAAWGG 294 (510)
T ss_pred ccchHHHHHHHHHHHhcCCCC-eEEEecC--CceeeeccCcHHHHHHHHHhcCEEEEeeccccc
Confidence 68999999887764332 2 4444332 232333356788999999999999999999987
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=83.66 E-value=33 Score=32.27 Aligned_cols=199 Identities=15% Similarity=0.146 Sum_probs=103.0
Q ss_pred ccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEE
Q 018820 92 VLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTI 171 (350)
Q Consensus 92 ~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~V 171 (350)
.+++|+++.+++..- ..+.++.. .+|.+...++. .. .+. -+-+.+ +++|++|..++.++...+.+-.-|
T Consensus 63 hp~VV~A~~kQmat~-~tN~RFlh----d~lv~cA~~l~-st-lPe--Lsvc~F--~NSGSEANDLALRLAR~ftkhqDv 131 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATI-STNNRFLH----DELVQCARTLT-ST-LPE--LSVCFF--VNSGSEANDLALRLARNFTKHQDV 131 (452)
T ss_pred CHHHHHHHHHHHhHh-cccchhhH----HHHHHHHHHHh-hc-CCC--ceEEEE--ecCCchhhHHHHHHHHhhcccCce
Confidence 467888887777621 12233422 33444333322 21 221 233444 999999999987765555544446
Q ss_pred EEcCCCCCChHHHH-H------HcCC---eEEEE---Eeec--------CCCCCCC-----HHHHHHHhhc---CCCCcE
Q 018820 172 YIPQPTWGNHPKVF-T------LAGL---SVKSY---RYYD--------PATRGLN-----FQGLLEDLGS---APAGAI 222 (350)
Q Consensus 172 lv~~P~y~~~~~~~-~------~~G~---~~~~v---~~~~--------~~~~~~d-----~~~l~~~l~~---~~~~~~ 222 (350)
++.+-.|.+|.... + ..|. ++..| |+.| .....-| .+.+++.++. +..+.+
T Consensus 132 ItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvA 211 (452)
T KOG1403|consen 132 ITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVA 211 (452)
T ss_pred EEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHH
Confidence 66677777775431 1 0111 11112 2100 0000011 2233333332 222222
Q ss_pred EEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC
Q 018820 223 VLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 223 ~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
+++--+-+.=-|.+ ++..-.+++++..+.+|-+.|.||+--+|..-+ +.-|+..... .-..++ .+.|.+| .|
T Consensus 212 AfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG--~hyWafq~y~-fiPDIV---tmgKpmG-NG 284 (452)
T KOG1403|consen 212 AFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG--SHYWAFQTYN-FIPDIV---TMGKPMG-NG 284 (452)
T ss_pred HHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc--hhhhhhhhhc-cccchh---eecccCC-CC
Confidence 33322222223433 445567888888899999999999988886533 4445543321 111233 4679999 99
Q ss_pred cceeEEE
Q 018820 302 ERVGALS 308 (350)
Q Consensus 302 ~RvG~l~ 308 (350)
.-|++++
T Consensus 285 hPVa~Va 291 (452)
T KOG1403|consen 285 HPVAAVA 291 (452)
T ss_pred CeeeEEe
Confidence 9999766
No 391
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=81.10 E-value=16 Score=35.24 Aligned_cols=224 Identities=16% Similarity=0.140 Sum_probs=116.6
Q ss_pred CCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC--CCCcHHHH---HHH
Q 018820 52 VVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP--IVGLAEFN---KLS 126 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p--~~G~~~lr---~ai 126 (350)
+....| .++.+.+.-++ ....-|.|-..++.+ ..+|-+++-.... +.....|+. ..|-.++. |.+
T Consensus 21 l~~~DP-ev~~ii~~Ek~-RQ~~gieLIaSENFt-------s~aVmeAlGS~lt-NKYSEGyPG~RYYGGne~ID~iE~L 90 (477)
T KOG2467|consen 21 LEEVDP-EVHDIIEKEKE-RQKRGIELIASENFT-------SRAVMEALGSCLT-NKYSEGYPGARYYGGNEYIDQIELL 90 (477)
T ss_pred hhhcCh-HHHHHHHHHHH-hhhcceeEeecccch-------HHHHHHHHhHHhh-cccccCCCcccccCcchHHHHHHHH
Confidence 443333 35666654332 122346676665522 4455555555442 222333432 12333444 333
Q ss_pred HHH----HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCCe---------E
Q 018820 127 AKL----ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGLS---------V 192 (350)
Q Consensus 127 a~~----~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~---------~ 192 (350)
++. .|+.+. ++.=+-||..+|+.|... ...+++.|+++|.-.+---.+|..- +..-+-+ -
T Consensus 91 Cq~RALeaF~ldp----~kWGVNVQp~SGSPANfa--vYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeS 164 (477)
T KOG2467|consen 91 CQKRALEAFGLDP----EKWGVNVQPYSGSPANFA--VYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFES 164 (477)
T ss_pred HHHHHHHHhCCCH----HHCceeeccCCCCchhhH--HHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeeccc
Confidence 433 456542 233333789999988876 5667789999987544333333211 1111111 1
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSL 270 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~ 270 (350)
.+|.+ ++++.-+|.|.|++.... +|+ +|+-..-. -...++- .++-++|.+.|.+++.|.+.- +++-.+.
T Consensus 165 mPYkv-~~~TG~IDYD~Le~~A~~frPk---~iiaG~Sa--Y~R~~DY---aR~R~Iad~~gA~Lm~DMAHISgLVAA~v 235 (477)
T KOG2467|consen 165 MPYKV-DPSTGYIDYDKLEKTATLFRPK---LIIAGTSA--YSRLIDY---ARFRKIADKVGAYLMADMAHISGLVAAGV 235 (477)
T ss_pred Cceee-CCCCCceehHHHHHHHHhcCCc---EEEecccc--chhhccH---HHHHHHHHhcCceeehhhhhHHHHHhccc
Confidence 23333 677888999999987654 344 55532211 1223333 445556668899999999863 2332110
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
.+ +.| ...=|+..+.-|++ -|=|-|.+.+-
T Consensus 236 ---ip--sPF---ey~DiVTTTTHKsL--RGPRg~mIFyR 265 (477)
T KOG2467|consen 236 ---IP--SPF---EYCDIVTTTTHKSL--RGPRGAMIFYR 265 (477)
T ss_pred ---CC--Ccc---cccceeeccccccc--cCCcceeEEEe
Confidence 01 111 01346677788875 68898866643
No 392
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=76.75 E-value=6.6 Score=37.47 Aligned_cols=69 Identities=10% Similarity=0.033 Sum_probs=45.9
Q ss_pred HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 183 KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
..+...++++....+.|.++|.+......+.-..... .....+.|-.+|++|+++|++.|+++||-||=
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~-------~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS-------TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCcccccccccc-------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3444667777777776666777765555443211111 01234667789999999999999999998884
No 393
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=75.63 E-value=51 Score=28.24 Aligned_cols=83 Identities=7% Similarity=0.056 Sum_probs=56.1
Q ss_pred cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 166 YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 166 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
..+..|+...|-+..+...+...|++...+-........-.+..++++++...-..++.++ |+ .++.+++++|
T Consensus 58 ~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WL--p~-----~l~~~~lRRL 130 (168)
T TIGR00623 58 QQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWL--TD-----ELTEEEHAKL 130 (168)
T ss_pred ccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecC--Cc-----cCCHHHHHHH
Confidence 4567888888888899999999999866654333322233477889999876555444444 32 2668889888
Q ss_pred HHHHHhcCcE
Q 018820 246 RQLMRSKGLL 255 (350)
Q Consensus 246 ~~~~~~~~~~ 255 (350)
--.|+.-+.+
T Consensus 131 qlAA~~G~al 140 (168)
T TIGR00623 131 VRAAEEGNAM 140 (168)
T ss_pred HHHHHhCCCe
Confidence 6666665443
No 394
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=73.79 E-value=9.6 Score=35.84 Aligned_cols=67 Identities=12% Similarity=0.052 Sum_probs=45.5
Q ss_pred HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 184 VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
.+...++++....+.|.++|.+....+.+.-+.... .++ .+.|-.+|++|+++|++.|+++|+-||=
T Consensus 24 ~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~-------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 24 VLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ-------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc-------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 344677777777776666777776655554322111 112 2445589999999999999999998883
No 395
>PRK10595 SOS cell division inhibitor; Provisional
Probab=70.30 E-value=68 Score=27.37 Aligned_cols=83 Identities=8% Similarity=0.055 Sum_probs=55.1
Q ss_pred cCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 166 YHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 166 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
..+..|+...|-+..|...+...|++...+-...+.+..-.+..++++++...-..++..+ |+ .++.+++++|
T Consensus 54 ~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wl--p~-----~l~~~~~RRL 126 (164)
T PRK10595 54 QQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWL--PD-----ELTEEEHARL 126 (164)
T ss_pred ccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECC--cc-----cCCHHHHHHH
Confidence 4567888889999999999999999766554433332223467778888775544444443 22 2567888888
Q ss_pred HHHHHhcCcE
Q 018820 246 RQLMRSKGLL 255 (350)
Q Consensus 246 ~~~~~~~~~~ 255 (350)
--.|++-+.+
T Consensus 127 QlAAe~g~~l 136 (164)
T PRK10595 127 VDAAQEGNAM 136 (164)
T ss_pred HHHHHhCCCE
Confidence 7666665543
No 396
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=70.03 E-value=31 Score=24.38 Aligned_cols=23 Identities=9% Similarity=0.060 Sum_probs=19.1
Q ss_pred CC-HHHHHHHHHHHHhcCcEEEEc
Q 018820 237 PT-LQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 237 ~s-~~~~~~i~~~~~~~~~~ii~D 259 (350)
++ ++++++|.+|.++-|.++|.|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 44 599999999999888888764
No 397
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=69.54 E-value=19 Score=29.07 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC----CCCCCCCCCCHHHHHHHHHHHHhcCc
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC----AHNPTGVDPTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~----p~NPTG~~~s~~~~~~i~~~~~~~~~ 254 (350)
+++++.+|+ ...+|+..+.++++...+ .+++..| +|..+|.....++.+.+-++.++.|+
T Consensus 28 ~vriIrvpC----~Grv~~~~il~Af~~GAD--GV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPC----SGRVDPEFILRAFEKGAD--GVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccC----CCccCHHHHHHHHHcCCC--EEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 456777777 457999999999987533 2455443 45589999988888888888887664
No 398
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=67.74 E-value=12 Score=35.90 Aligned_cols=64 Identities=14% Similarity=0.063 Sum_probs=44.8
Q ss_pred HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 183 KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
..+....+++....+.|.++|.+....+.+.-+.. ...+|-.+|++|+++|++.|+++||-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g------------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG------------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc------------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 33446677777777767667777766665533211 01246689999999999999999988874
No 399
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=67.32 E-value=13 Score=35.21 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=40.4
Q ss_pred HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 184 VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
.+...++++....+.|..+|.+....+.+.-+. + ..|-.+|++|+++|++.|+++|+-||=
T Consensus 26 ~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~---g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 26 AMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK---A-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHhCCeEEEEEEecCCCceeecCCCcccccc---C-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 344567777677665666666664444332111 1 035569999999999999999988773
No 400
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.96 E-value=41 Score=30.24 Aligned_cols=88 Identities=13% Similarity=0.110 Sum_probs=61.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
+.-|++ |.++++++-.+. -..+...|-.|+-..-.-....+.....|+.+..++..+++ ++..++..+...+.
T Consensus 7 ~k~VlI--tgcs~GGIG~al-a~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYAL-AKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANPD 79 (289)
T ss_pred CCeEEE--eecCCcchhHHH-HHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCCC
Confidence 566777 888888885532 23456688888888777777777777889888777763332 45667777777777
Q ss_pred CcEEEEecCCCCCCC
Q 018820 220 GAIVLLHACAHNPTG 234 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG 234 (350)
++.=++.+|..-|.-
T Consensus 80 Gkld~L~NNAG~~C~ 94 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCT 94 (289)
T ss_pred CceEEEEcCCCCCcc
Confidence 888888888766653
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=65.07 E-value=51 Score=29.10 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=50.6
Q ss_pred chhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 151 GTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|..+-.++..+++ .+ ...++..+.-......++..|++++..++ -|.+.|.++++... .+++...+
T Consensus 8 G~~G~~v~~~L~~---~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~g~d---~v~~~~~~ 74 (233)
T PF05368_consen 8 GNQGRSVVRALLS---AGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALKGVD---AVFSVTPP 74 (233)
T ss_dssp SHHHHHHHHHHHH---TTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHTTCS---EEEEESSC
T ss_pred cHHHHHHHHHHHh---CCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHcCCc---eEEeecCc
Confidence 4444455444433 44 34444444411223445678998876655 37889999997532 24443333
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.+ ....+.-..+++.|++.|+-.+
T Consensus 75 ~~----~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 75 SH----PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SC----CCHHHHHHHHHHHHHHHT-SEE
T ss_pred ch----hhhhhhhhhHHHhhhccccceE
Confidence 33 3346777899999999775444
No 402
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=63.13 E-value=1.4e+02 Score=28.31 Aligned_cols=56 Identities=16% Similarity=0.277 Sum_probs=37.4
Q ss_pred CCCCHHHHH---HHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 203 RGLNFQGLL---EDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 203 ~~~d~~~l~---~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
..++.++++ +.+.. ..+..+ +++ +..=|-| ++.+...+|++.|++.+..++.|..=
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~-Vvl-sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDI-VVL-SGSLPPG--VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCE-EEE-eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 345544444 44444 333333 333 4566777 67889999999999999999999754
No 403
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=61.57 E-value=45 Score=29.64 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=52.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh-HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH-PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
...|++ .-||..|.+-+- + ++..|..|.+-.|....- ....+..++..+. + .++.+.+..
T Consensus 12 ~k~Vlv--vGgG~va~rKa~-~--ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~------~--~~~~~~~~~------ 72 (210)
T COG1648 12 GKKVLV--VGGGSVALRKAR-L--LLKAGADVTVVSPEFEPELKALIEEGKIKWIE------R--EFDAEDLDD------ 72 (210)
T ss_pred CCEEEE--ECCCHHHHHHHH-H--HHhcCCEEEEEcCCccHHHHHHHHhcCcchhh------c--ccChhhhcC------
Confidence 556777 888888886543 2 356788899999988333 3333333322221 1 123222222
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
..+++.++.+ .+.=++|.+.|+++++++
T Consensus 73 --~~lviaAt~d--------~~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 73 --AFLVIAATDD--------EELNERIAKAARERRILV 100 (210)
T ss_pred --ceEEEEeCCC--------HHHHHHHHHHHHHhCCce
Confidence 3366665543 667789999999988654
No 404
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=61.44 E-value=22 Score=28.61 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=33.8
Q ss_pred CCCHHHHH-HHhhcCCCCcEEEEecCCCCCCCCCCCHHHH---HHHHHHHHh-----cCcEEEEccCCCCCCC
Q 018820 204 GLNFQGLL-EDLGSAPAGAIVLLHACAHNPTGVDPTLQQW---ERIRQLMRS-----KGLLPFFDSAYQGFAS 267 (350)
Q Consensus 204 ~~d~~~l~-~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~---~~i~~~~~~-----~~~~ii~DeaY~~~~~ 267 (350)
..++..+. .++... ...+++.||.|..-+ .++.+++ ++|.+.|+. .|.+||.++-|.-|..
T Consensus 50 ~v~~R~I~~~al~~~-A~~vIl~HNHPsG~~--~PS~~D~~~T~~L~~~~~~l~I~llDHiIv~~~~~~S~~e 119 (123)
T PF04002_consen 50 PVDPREIFRRALRLN-ASSVILAHNHPSGDP--EPSDADIALTRRLKKAARLLGIELLDHIIVGDGGYFSFRE 119 (123)
T ss_dssp GCSHHHHHHHHHHTT--SEEEEEEE-TTS----S--HHHHHHHHHHHHHHHHHT-EEEEEEEEESSEEEETCC
T ss_pred cccHHHHHHHHHhhC-CceEEEEEEcCCCCC--CCCHhHHHHHHHHHHHHHHcCCeeeeEEEEeCCcEEEehh
Confidence 34555554 444443 346677776554322 3566766 677777776 4677777777766653
No 405
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=59.55 E-value=25 Score=33.92 Aligned_cols=74 Identities=15% Similarity=0.122 Sum_probs=43.7
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEE-Ee--cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVL-LH--ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l-~~--~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
+...+++.....+.|.++|.+....+.+.-+... ...-.+ .- ..-+.|.|-.+|++|+++|++.|+++|+-||=
T Consensus 27 ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 27 MALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred HHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 3456666666666566667776655554322110 000000 00 01123557789999999999999999987773
No 406
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=59.53 E-value=89 Score=29.42 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=43.2
Q ss_pred CCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
.+..+++.++-. + ..-| |.|++..|.|..... +. -.+.+++..+..+.-+++++ +
T Consensus 87 ~~t~~ai~~a~~--A-~~~Gad~vlv~~P~y~~~~~-----------------~~---l~~yf~~va~a~~~lPv~iY-n 142 (309)
T cd00952 87 LNTRDTIARTRA--L-LDLGADGTMLGRPMWLPLDV-----------------DT---AVQFYRDVAEAVPEMAIAIY-A 142 (309)
T ss_pred CCHHHHHHHHHH--H-HHhCCCEEEECCCcCCCCCH-----------------HH---HHHHHHHHHHhCCCCcEEEE-c
Confidence 445566666421 1 2234 889999897643311 00 12223333333212354444 2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
+| .-||+.++.+.+++|++ -.++.=|=|.
T Consensus 143 ~P-~~tg~~l~~~~l~~L~~---~pnivgiKds 171 (309)
T cd00952 143 NP-EAFKFDFPRAAWAELAQ---IPQVVAAKYL 171 (309)
T ss_pred Cc-hhcCCCCCHHHHHHHhc---CCCEEEEEec
Confidence 33 23899999988877753 2466666554
No 407
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=59.48 E-value=27 Score=34.81 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=44.6
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc------EEEE---ecCC--CCCCCCCCCHHHHHHHHHHHHhcC
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA------IVLL---HACA--HNPTGVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~------~~l~---~~~p--~NPTG~~~s~~~~~~i~~~~~~~~ 253 (350)
+....+++....+.|..+|.+.+..+.+.-+....+. ..++ -..+ ..+.|-.+|++|+++|++.|++++
T Consensus 31 ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~rg 110 (445)
T cd06569 31 MAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKARH 110 (445)
T ss_pred HHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHHcC
Confidence 3456667766666666677777666554332210000 0010 0011 124466899999999999999999
Q ss_pred cEEEE
Q 018820 254 LLPFF 258 (350)
Q Consensus 254 ~~ii~ 258 (350)
|-||-
T Consensus 111 I~VIP 115 (445)
T cd06569 111 IEVIP 115 (445)
T ss_pred CEEEE
Confidence 98883
No 408
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.14 E-value=42 Score=32.15 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=51.1
Q ss_pred CCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 177 TWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 177 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
.|+.|+..++...+++++++...+ .-.+-....+...+. ++. --|. .++.+|.++|++.|+.+++++
T Consensus 60 ~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~~K~----VL~---EKPl--a~n~~e~~~iveaA~~rgv~~ 126 (351)
T KOG2741|consen 60 AYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNKGKH----VLC---EKPL--AMNVAEAEEIVEAAEARGVFF 126 (351)
T ss_pred cccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHcCCc----EEe---cccc--cCCHHHHHHHHHHHHHcCcEE
Confidence 789999999999999999887333 223334444443222 332 4455 477899999999999999766
Q ss_pred EEccCCCCCC
Q 018820 257 FFDSAYQGFA 266 (350)
Q Consensus 257 i~DeaY~~~~ 266 (350)
. |-.|.-|.
T Consensus 127 m-eg~~~R~~ 135 (351)
T KOG2741|consen 127 M-EGLWWRFF 135 (351)
T ss_pred E-eeeeeecC
Confidence 5 54444443
No 409
>PLN02970 serine racemase
Probab=59.06 E-value=1e+02 Score=29.16 Aligned_cols=79 Identities=14% Similarity=0.042 Sum_probs=44.6
Q ss_pred CCCCCCcHHHHHHHHHHHhCC-CCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 113 YLPIVGLAEFNKLSAKLILGA-DSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~-~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
+.-+.|.-..|-+......-. +.. .+.|+. ..+|..++.++... +...-.-.|++|.-+...-...++..|++
T Consensus 50 ~~nptGSfKdRga~~~i~~~~~~~~---~~~vv~--aSsGN~g~alA~~a-~~~G~~~~ivvp~~~~~~k~~~~~~~GA~ 123 (328)
T PLN02970 50 CFQKGGAFKFRGACNAIFSLSDDQA---EKGVVT--HSSGNHAAALALAA-KLRGIPAYIVVPKNAPACKVDAVIRYGGI 123 (328)
T ss_pred CCCCCCCcHHHHHHHHHHHhhHhhc---CCeEEE--ECCcHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 333447666665554432111 111 334665 77888888775322 22333355667665555456678899999
Q ss_pred EEEEEe
Q 018820 192 VKSYRY 197 (350)
Q Consensus 192 ~~~v~~ 197 (350)
++.++-
T Consensus 124 Vi~~~~ 129 (328)
T PLN02970 124 ITWCEP 129 (328)
T ss_pred EEEeCC
Confidence 988753
No 410
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=58.75 E-value=1e+02 Score=29.70 Aligned_cols=229 Identities=17% Similarity=0.190 Sum_probs=102.9
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-------CCCCCCCCCCcHHHHHHHHHH--HhCCCCCCccCCcE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-------RVKEYLPIVGLAEFNKLSAKL--ILGADSPAIRENRV 143 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-------~~~~Y~p~~G~~~lr~aia~~--~~g~~~~~~~~~~v 143 (350)
+...||+.|-. -.+.++++++.+.+..-.+ ..|+= -.+..-+-++..++ +++.+. .-+|
T Consensus 4 ~~~~nFsaGPa------~lp~~vL~~a~~e~~~~~g~g~svme~SHRs--k~~~~v~~~a~~~lreLl~iPd----~Y~V 71 (365)
T COG1932 4 PRVYNFSAGPA------ALPPEVLQQAQKELLDWNGLGMSVMEISHRS--KEFKNVLEEAEKDLRELLNIPD----DYKV 71 (365)
T ss_pred CCCCCCCCCcc------cCCHHHHHHHHHHHhhhccCCcceeeecccc--HHHHHHHHHHHHHHHHHhCCCC----CceE
Confidence 45678888854 2346677777777652112 11211 11222233333333 455421 2356
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCC--eEEEEEeecCC-CCCCCHHHHHHHhhcCCC
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGL--SVKSYRYYDPA-TRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~--~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~ 219 (350)
.++| .|+++.+..+ .+.++.++..-++-.-+|.....- ++..+- .+........+ +.-++++.+. + .
T Consensus 72 lflq-GGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~----~ 142 (365)
T COG1932 72 LFLQ-GGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--F----S 142 (365)
T ss_pred EEEc-CccHHHHHHH--HHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--c----C
Confidence 6622 3456666553 344444332216666777766433 334443 22222221111 2334433332 1 1
Q ss_pred CcEEEEecCCCC-CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 220 GAIVLLHACAHN-PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 220 ~~~~l~~~~p~N-PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+...+++=|+|+ -+|+-+... ..+ . .+.++|.|..=.-|.. + ..+.. --++-.|.=|++|
T Consensus 143 ~~~ayv~~~~NeTi~Gv~v~~~--p~~----~-~~~~~v~D~SS~ilsr-~-----iDvsk------~dviyagaQKnlG 203 (365)
T COG1932 143 DNDAYVHFCWNETISGVEVPEL--PDI----G-SDGLLVADASSAILSR-P-----IDVSK------YDVIYAGAQKNLG 203 (365)
T ss_pred CCccEEEEecCCcccceEccCC--CCC----C-CCceEEEecccHHhcC-C-----CChhH------cceEEEehhhccC
Confidence 112455555555 345555421 111 1 1266777853211111 0 01111 1345567999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHH---------HHHhhcccccCCChhHHHHHHHH
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQ---------VKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~---------l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
-.| ++.++ .. ++.+.++.+. .......+|-+||.+.-.+....
T Consensus 204 paG--ltvvI--vr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv 255 (365)
T COG1932 204 PAG--LTVVI--VR-PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLV 255 (365)
T ss_pred ccc--eEEEE--Ec-HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHH
Confidence 888 66544 33 3333333221 11124556777777766555443
No 411
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=58.62 E-value=79 Score=24.01 Aligned_cols=71 Identities=7% Similarity=0.036 Sum_probs=47.1
Q ss_pred CCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcE
Q 018820 176 PTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLL 255 (350)
Q Consensus 176 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 255 (350)
-....|...++..|++.+.+ - ..++..-....+.+.+... .++|++.+ ..+.+-...+-+.|+++|+.
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~~a---D~VIv~t~-------~vsH~~~~~vk~~akk~~ip 77 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIKKA---DLVIVFTD-------YVSHNAMWKVKKAAKKYGIP 77 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcCCC---CEEEEEeC-------CcChHHHHHHHHHHHHcCCc
Confidence 44567888999999998887 3 2222333333477776543 23444433 24677889999999999998
Q ss_pred EEE
Q 018820 256 PFF 258 (350)
Q Consensus 256 ii~ 258 (350)
++.
T Consensus 78 ~~~ 80 (97)
T PF10087_consen 78 IIY 80 (97)
T ss_pred EEE
Confidence 874
No 412
>PRK07476 eutB threonine dehydratase; Provisional
Probab=57.46 E-value=1e+02 Score=29.09 Aligned_cols=52 Identities=15% Similarity=0.065 Sum_probs=32.1
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
|+. ..+|..+..++..- +.+.-.-.|+++..+-..-...++.+|++++.++-
T Consensus 70 vv~--aSsGN~g~alA~~a-~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVT--ASTGNHGRALAYAA-RALGIRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEE--ECCChHHHHHHHHH-HHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 665 67788888774321 22222245555554444556678899999988753
No 413
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=57.40 E-value=70 Score=29.70 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=77.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCC--------CEEEEcCCCCCChHHHH-------H----HcCCeE-EEEEeecCC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQ--------RTIYIPQPTWGNHPKVF-------T----LAGLSV-KSYRYYDPA 201 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~g--------d~Vlv~~P~y~~~~~~~-------~----~~G~~~-~~v~~~~~~ 201 (350)
+|+. |-=.+.+++++-..--....| |.|++-+ ||..++ + ..+..+ ++|..
T Consensus 126 ~i~~--TRKT~PglR~leKyAV~~GGG~nHR~gLsDavliKD----NHia~~g~i~~Av~~aR~~~~~~~kIEVEv---- 195 (280)
T COG0157 126 RIAD--TRKTTPGLRLLEKYAVRAGGGDNHRFGLSDAVLIKD----NHIAAAGSITEAVRRARAAAPFTKKIEVEV---- 195 (280)
T ss_pred EEEe--ccCCCccHHHHHHHHHHhcCCccccCCCcceEEehh----hHHHHhccHHHHHHHHHHhCCCCceEEEEc----
Confidence 4554 777777777653222122222 7777765 444332 2 123222 45544
Q ss_pred CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh
Q 018820 202 TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV 281 (350)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~ 281 (350)
-++++++++++..++ ++++-| ++++++++.++++..++-.+++ ++|+.. ...++.++
T Consensus 196 ---esle~~~eAl~agaD---iImLDN--------m~~e~~~~av~~l~~~~~~~lE-------aSGgIt--~~ni~~yA 252 (280)
T COG0157 196 ---ESLEEAEEALEAGAD---IIMLDN--------MSPEELKEAVKLLGLAGRALLE-------ASGGIT--LENIREYA 252 (280)
T ss_pred ---CCHHHHHHHHHcCCC---EEEecC--------CCHHHHHHHHHHhccCCceEEE-------EeCCCC--HHHHHHHh
Confidence 268889999987666 777765 6799999999998666655554 234422 23566777
Q ss_pred hcCCcEEEEecccccc
Q 018820 282 ADGGECFIAQSYAKNL 297 (350)
Q Consensus 282 ~~~~~vi~~~S~SK~~ 297 (350)
.-+-.+|.++.+++..
T Consensus 253 ~tGVD~IS~galths~ 268 (280)
T COG0157 253 ETGVDVISVGALTHSA 268 (280)
T ss_pred hcCCCEEEeCccccCC
Confidence 7778999999888864
No 414
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=57.39 E-value=8.5 Score=36.69 Aligned_cols=66 Identities=12% Similarity=0.040 Sum_probs=42.1
Q ss_pred HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 184 VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
.+...+.+.....+.|.++|.+....+.+.-..... . ++.+ |-.+|++|+++|++.|+++||-||-
T Consensus 26 ~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~-------~-~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 26 QMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAY-------R-PSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTE-------S-TTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHcCCcEEEEEEecCCCCccccCCCccccccCcc-------c-cccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 344677787777786777777776555554332110 0 1113 4499999999999999999987774
No 415
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=57.20 E-value=97 Score=28.84 Aligned_cols=94 Identities=9% Similarity=0.084 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCCh--HHHHHHcCCeEEEEEeec
Q 018820 123 NKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYD 199 (350)
Q Consensus 123 r~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~ 199 (350)
|+.+.+.....- .+++-++...|+...-..+........-| |-|++..|.|... ..+...
T Consensus 56 r~~~~~~~~~~~-----~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~~~~i~~y------------ 118 (290)
T TIGR00683 56 KKEIFRIAKDEA-----KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHY------------ 118 (290)
T ss_pred HHHHHHHHHHHh-----CCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCCHHHHHHH------------
Q ss_pred CCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC--CCCCCCHHHHHHHHH
Q 018820 200 PATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP--TGVDPTLQQWERIRQ 247 (350)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP--TG~~~s~~~~~~i~~ 247 (350)
+.+.....++.+++++ ||| ||..++.+.+.+|++
T Consensus 119 ----------f~~v~~~~~~lpv~lY----n~P~~tg~~l~~~~i~~L~~ 154 (290)
T TIGR00683 119 ----------YDTIIAETGGLNMIVY----SIPFLTGVNMGIEQFGELYK 154 (290)
T ss_pred ----------HHHHHhhCCCCCEEEE----eCccccccCcCHHHHHHHhc
No 416
>PRK08246 threonine dehydratase; Provisional
Probab=56.52 E-value=1.3e+02 Score=28.37 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=45.7
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
.+.|.-..|-++........ ..+.|+. ..+|..++.++..- +.+.-.-.|+++...-..-...++..|.+++.
T Consensus 47 nptGS~K~R~a~~~~~~~~~----~~~~vv~--aSsGN~g~a~A~~a-~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~ 119 (310)
T PRK08246 47 QHTGSFKARGAFNRLLAAPV----PAAGVVA--ASGGNAGLAVAYAA-AALGVPATVFVPETAPPAKVARLRALGAEVVV 119 (310)
T ss_pred CCCCCCHHHHHHHHHHhhcc----cCCeEEE--eCCCHHHHHHHHHH-HHcCCCEEEEECCCCcHHHHHHHHHCCCEEEE
Confidence 34566677776655432221 1456666 77788888775322 22333356667665555556778899999987
Q ss_pred EE
Q 018820 195 YR 196 (350)
Q Consensus 195 v~ 196 (350)
++
T Consensus 120 ~~ 121 (310)
T PRK08246 120 VG 121 (310)
T ss_pred eC
Confidence 74
No 417
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=56.51 E-value=1.8e+02 Score=27.37 Aligned_cols=153 Identities=17% Similarity=0.091 Sum_probs=75.1
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH-HhcCCCE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLP-IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA-RHYHQRT 170 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p-~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~-~~~~gd~ 170 (350)
...++++++.-. .+|.. +....+|.+++.+.. .. ..-...-|.++..-||.|.-.+++.+-. +...|.+
T Consensus 54 ~~~~~~a~~~Ga------~~~l~~P~~~~~l~~~l~~~~-~~--~~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~ 124 (322)
T TIGR03815 54 GALWRAAAAVGA------EHVAVLPEAEGWLVELLADLD-QS--PPARGVVVAVIGGRGGAGASTLAAALALAAARHGLR 124 (322)
T ss_pred HHHHHHHHHhCh------hheeeCCCCHHHHHHHHHhhc-cC--CCCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCC
Confidence 445666654422 23433 234567888887652 11 1111233444445566555443322211 1235655
Q ss_pred EEE--cCCCCCChHHHHHHcCCeEEE-EEee--cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 171 IYI--PQPTWGNHPKVFTLAGLSVKS-YRYY--DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 171 Vlv--~~P~y~~~~~~~~~~G~~~~~-v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
|++ .+|....... ..|.+..+ +... ......+|.+.+.+.+... . .+-+++.+.++ +..++.+.++++
T Consensus 125 VlLvD~D~~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~--~l~vl~~~~~~-~~~~~~~~l~~~ 197 (322)
T TIGR03815 125 TLLVDADPWGGGLDL---LLGAEDVPGLRWPDLSQARGRLPAGALRDALPRR-G--GLSVLSWGRAV-GAALPPAAVRAV 197 (322)
T ss_pred EEEEecCCCCCCeee---eecCCCCCCcCHHHHhhcCCCcCHHHHHHhCCCc-C--CeEEEecCCCC-cCCCCHHHHHHH
Confidence 655 3555543221 22322110 0000 1111345666676666542 2 25566666554 455788889999
Q ss_pred HHHHHhcCcEEEEccC
Q 018820 246 RQLMRSKGLLPFFDSA 261 (350)
Q Consensus 246 ~~~~~~~~~~ii~Dea 261 (350)
++..+++-=++|.|..
T Consensus 198 l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 198 LDAARRGGDLVVVDLP 213 (322)
T ss_pred HHHHHhcCCEEEEeCC
Confidence 9988775456777975
No 418
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=55.26 E-value=77 Score=29.85 Aligned_cols=103 Identities=18% Similarity=0.148 Sum_probs=62.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc---CCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP---QPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~---~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
...|+. .-|+|+-+-.- ....+..-|..|++| ++.++.+......+| ++...++ +. -|.|.+.++++.
T Consensus 60 sGiVaT--VFGAtGFlGry-vvnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~f-d~----~DedSIr~vvk~ 130 (391)
T KOG2865|consen 60 SGIVAT--VFGATGFLGRY-VVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKF-DL----RDEDSIRAVVKH 130 (391)
T ss_pred cceEEE--EecccccccHH-HHHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeecc-CC----CCHHHHHHHHHh
Confidence 455555 56888877322 233445678999998 666666666666655 5666666 43 478888888865
Q ss_pred CCCCcEEEEecCCCCCCCC----CCCHHHHHHHHHHHHhcCc
Q 018820 217 APAGAIVLLHACAHNPTGV----DPTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~----~~s~~~~~~i~~~~~~~~~ 254 (350)
.. ++|=+---.-+|+. +....--++|+.+|++-|+
T Consensus 131 sN---VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 131 SN---VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred Cc---EEEEeeccccccCCcccccccchHHHHHHHHHHhhCh
Confidence 32 12222223445553 2233445788999998765
No 419
>PRK05638 threonine synthase; Validated
Probab=53.95 E-value=1.2e+02 Score=30.07 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=41.0
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
+.-+.|.-.-|.+..-........ .+.|+. ..+|..+..+++ .-+...-.-.|++|.-.-..-...++..|+++
T Consensus 88 ~~nPtGSfKdR~a~~~i~~a~~~g---~~~vv~--aSsGN~g~alA~-~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~v 161 (442)
T PRK05638 88 TRNPTGSFRDRLATVAVSYGLPYA---ANGFIV--ASDGNAAASVAA-YSARAGKEAFVVVPRKVDKGKLIQMIAFGAKI 161 (442)
T ss_pred CCCCCCChHHHHHHHHHHHHHHcC---CCEEEE--eCCChHHHHHHH-HHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEE
Confidence 333457666665443321111111 345666 677777777743 22222222445555433333455677899999
Q ss_pred EEEE
Q 018820 193 KSYR 196 (350)
Q Consensus 193 ~~v~ 196 (350)
+.++
T Consensus 162 i~v~ 165 (442)
T PRK05638 162 IRYG 165 (442)
T ss_pred EEEC
Confidence 8885
No 420
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=53.72 E-value=1e+02 Score=29.14 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=63.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCC-C-EEEEcCCC--CCChHH--HHHHcCCeEEEEEeecCCCC--CCCHHHHHHH
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQ-R-TIYIPQPT--WGNHPK--VFTLAGLSVKSYRYYDPATR--GLNFQGLLED 213 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~g-d-~Vlv~~P~--y~~~~~--~~~~~G~~~~~v~~~~~~~~--~~d~~~l~~~ 213 (350)
+.++ |.|+.++.++......-..-| + ..++.++. |..-.+ ..+..|.+++.++. . .++ ...++.+.+.
T Consensus 65 dTlv--T~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~-~-~d~~~~~~~~~~~e~ 140 (323)
T COG2515 65 DTLV--TYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDA-G-TDIGINASAEELAEE 140 (323)
T ss_pred cEEE--EecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecC-C-CChhhchhhHHHHHH
Confidence 3555 999999987642111111223 3 44555554 222222 23477888888765 1 223 4567888888
Q ss_pred hhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh
Q 018820 214 LGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251 (350)
Q Consensus 214 l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~ 251 (350)
++++..++.+|.-- ..||-|..==.+-..||.+.+++
T Consensus 141 ~~~~g~kpyvIp~G-G~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 141 VRKQGGKPYVIPEG-GSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HHhcCCCCcEeccC-CcCccccccHHHHHHHHHHHHhh
Confidence 88876666444433 37997766666677788888876
No 421
>PRK08638 threonine dehydratase; Validated
Probab=52.50 E-value=1.3e+02 Score=28.65 Aligned_cols=77 Identities=16% Similarity=0.071 Sum_probs=42.1
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
.+.|.-..|-+......-.... ....|+. +.+|..+..++... +...-.-.|++|.-+-..-...++..|++++.
T Consensus 52 nptGS~KdR~a~~~i~~~~~~~--~~~~vv~--~SsGN~g~alA~~a-a~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~ 126 (333)
T PRK08638 52 QRTGSFKIRGAFNKLSSLTDAE--KRKGVVA--CSAGNHAQGVALSC-ALLGIDGKVVMPKGAPKSKVAATCGYGAEVVL 126 (333)
T ss_pred CccCCcHHHHHHHHHHhccHHh--cCCeEEE--eCCcHHHHHHHHHH-HHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEE
Confidence 3456656665554432111000 1234555 77788888774321 22232345666655544556678899999987
Q ss_pred EE
Q 018820 195 YR 196 (350)
Q Consensus 195 v~ 196 (350)
++
T Consensus 127 ~~ 128 (333)
T PRK08638 127 HG 128 (333)
T ss_pred EC
Confidence 64
No 422
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=51.99 E-value=51 Score=30.30 Aligned_cols=69 Identities=12% Similarity=0.049 Sum_probs=37.9
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
++++..++.+..++.+.+.+.+.+.+.... .+..+ +..+-..++-.....+.+.+.++.+.++|+++|+
T Consensus 74 ~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~V-IN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 74 LCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHI-INISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCE-EEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 456666666554444444555555544321 11223 3333333332223456778888888899999886
No 423
>PRK08265 short chain dehydrogenase; Provisional
Probab=50.38 E-value=1.7e+02 Score=26.22 Aligned_cols=94 Identities=11% Similarity=0.040 Sum_probs=45.2
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..++. |- -|.+.+.+.++. .-.+.-++
T Consensus 11 ItGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dl----~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 11 VTGGATLIGAAV-ARALVAAGARVAIVDIDADNGAAVAASLGERARFIAT-DI----TDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEe-cC----CCHHHHHHHHHHHHHHhCCCCEE
Confidence 556666663221 1223456777777654323333444445656666665 32 345555544432 11112245
Q ss_pred EecCCC-CCCCCCCCHHHHHHHHH
Q 018820 225 LHACAH-NPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~-NPTG~~~s~~~~~~i~~ 247 (350)
+++-.- .+.+...+.++|++..+
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHh
Confidence 544322 23344567777766544
No 424
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=49.73 E-value=1.2e+02 Score=27.93 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=21.2
Q ss_pred CCcEEEEecCCCCC--CCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 219 AGAIVLLHACAHNP--TGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 219 ~~~~~l~~~~p~NP--TG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
..+++++ ||| ||+.++.+.+++|++ ..++.=|=|
T Consensus 124 ~~pi~lY----n~P~~tg~~l~~~~l~~L~~---~~~v~giK~ 159 (285)
T TIGR00674 124 DLPIILY----NVPSRTGVSLYPETVKRLAE---EPNIVAIKE 159 (285)
T ss_pred CCCEEEE----ECcHHhcCCCCHHHHHHHHc---CCCEEEEEe
Confidence 3454444 455 799999998887764 234544444
No 425
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=49.70 E-value=1.7e+02 Score=25.69 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=51.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
..+|++ .-||..|.+-+..| +..|-.|.+-+|....-...+...| ++..+.- .++.+ .+.
T Consensus 9 gk~vlV--vGgG~va~rk~~~L---l~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~------~~~~~----dl~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKARLL---LKAGAQLRVIAEELESELTLLAEQG-GITWLAR------CFDAD----ILE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHHHHH---HHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC------CCCHH----HhC----
Confidence 457777 77888888765433 4566677777776653333333333 3433321 12222 122
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE-EEcc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP-FFDS 260 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i-i~De 260 (350)
+. .+++.++++| +.-++|.+.|++.++++ +.|+
T Consensus 69 ~~-~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 69 GA-FLVIAATDDE-------ELNRRVAHAARARGVPVNVVDD 102 (205)
T ss_pred Cc-EEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCC
Confidence 12 3444555543 33468899999999877 2444
No 426
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=48.43 E-value=1.9e+02 Score=27.07 Aligned_cols=54 Identities=17% Similarity=0.088 Sum_probs=31.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++.. -+...-.-.|+++.-+-..-...++..|++++.++-
T Consensus 71 ~~vv~--~SsGN~g~alA~~-a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 71 KAVAC--ASTGNTSASLAAY-AARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CEEEE--eCCCHHHHHHHHH-HHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 45655 6688888877432 122222244555554433345567889999988753
No 427
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=48.13 E-value=2e+02 Score=26.55 Aligned_cols=54 Identities=17% Similarity=0.073 Sum_probs=31.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. +.+|..+..++... +...-.-.|+++.-....-...++..|.+++.++-
T Consensus 66 ~~iv~--~ssGN~g~alA~~a-~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVA--ASAGNHAQGVAYAA-KLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEE--ECCCHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 44665 66777777764322 22222234455443333345667899999988864
No 428
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=47.73 E-value=48 Score=32.58 Aligned_cols=28 Identities=18% Similarity=0.418 Sum_probs=24.4
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~ 253 (350)
+.-++.+.||| +|.+|+++|+++++.++
T Consensus 289 ~~D~V~lGcPH------~S~~El~~ia~ll~gr~ 316 (400)
T PF04412_consen 289 KVDLVALGCPH------LSLEELREIAELLEGRK 316 (400)
T ss_pred CCCEEEECCCC------CCHHHHHHHHHHHhCCC
Confidence 34588999999 99999999999998765
No 429
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=46.69 E-value=2.2e+02 Score=28.07 Aligned_cols=154 Identities=15% Similarity=0.152 Sum_probs=84.0
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
..|||..+|...+. .-+...++|+...+...-....+-+.-..+.++|+.+.+. .+ + .. ||
T Consensus 60 ~tKVNaNIGtS~~~---~d~~~E~~K~~~A~~~GADtiMDLStggdl~~iR~~il~~---s~--------v----pv-GT 120 (431)
T PRK13352 60 RTKVNANIGTSSDI---SDIEEELEKAKVAVKYGADTIMDLSTGGDLDEIRRAIIEA---SP--------V----PV-GT 120 (431)
T ss_pred eeEEeeeecCCCCC---CCHHHHHHHHHHHHHcCCCeEeeccCCCCHHHHHHHHHHc---CC--------C----CC-cC
Confidence 35899999987443 3346667777666542112223333334467888777442 11 2 11 23
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC--C-----Cc-
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP--A-----GA- 221 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--~-----~~- 221 (350)
--++-++. ...-..|+.+ +-+...+...++ .-|+...++.+ +++.+.++..-+... . ++
T Consensus 121 VPiYqa~~-~~~~k~~~~~---~mt~d~~~~~ie~qa~~GVDfmTiHc------Gi~~~~~~~~~~~~R~~giVSRGGs~ 190 (431)
T PRK13352 121 VPIYQAAV-EAARKYGSVV---DMTEDDLFDVIEKQAKDGVDFMTIHC------GVTRETLERLKKSGRIMGIVSRGGSF 190 (431)
T ss_pred hhHHHHHH-HHHhcCCChh---hCCHHHHHHHHHHHHHhCCCEEEEcc------chhHHHHHHHHhcCCccCeecCCHHH
Confidence 33322111 1111223322 222333444433 35888888877 577776666543210 0 00
Q ss_pred --EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 222 --IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 222 --~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
.-.++++--||- -+++.+|+++|++||+.+=.=|
T Consensus 191 ~~~WM~~n~~ENPl-----ye~fD~lLeI~~~yDVtlSLGD 226 (431)
T PRK13352 191 LAAWMLHNNKENPL-----YEHFDYLLEILKEYDVTLSLGD 226 (431)
T ss_pred HHHHHHHcCCcCch-----HHHHHHHHHHHHHhCeeeeccC
Confidence 123467778888 7889999999999998765444
No 430
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=45.99 E-value=3e+02 Score=26.99 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=42.1
Q ss_pred CCCEEEEcCCCCCChH-----H----HHHHcCCeEEE-EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC
Q 018820 167 HQRTIYIPQPTWGNHP-----K----VFTLAGLSVKS-YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236 (350)
Q Consensus 167 ~gd~Vlv~~P~y~~~~-----~----~~~~~G~~~~~-v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~ 236 (350)
+||.|++..+.++++. . .+...|++++. +.. . ...+-+++...++.-.++-++.+|.
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~---S-gHa~~~dl~~~i~~~~Pk~~ipvHg--------- 384 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV---S-GHASQEDHKLLLRLLKPKYIIPVHG--------- 384 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe---c-CCCCHHHHHHHHHHhCCCEEEecCC---------
Confidence 6789999998888876 1 12346776643 222 1 2345566666555433333344442
Q ss_pred CCHHHHHHHHHHHHhcCc
Q 018820 237 PTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~ 254 (350)
....+.+.++++++.|+
T Consensus 385 -e~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 385 -EYRMLINHTKLAEEEGY 401 (422)
T ss_pred -cHHHHHHHHHHHHHcCC
Confidence 23466777777776653
No 431
>PRK06815 hypothetical protein; Provisional
Probab=45.62 E-value=2.2e+02 Score=26.75 Aligned_cols=80 Identities=24% Similarity=0.194 Sum_probs=43.3
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
+.-+.|.-..|-+......-... ...+.|+. ..+|..+..++... +...-.-.|+++..+-..-...++..|+++
T Consensus 43 ~~nptgS~KdR~a~~~~~~l~~~--~~~~~vv~--aSsGN~g~alA~~a-~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V 117 (317)
T PRK06815 43 HLQHTGSFKFRGASNKLRLLNEA--QRQQGVIT--ASSGNHGQGVALAA-KLAGIPVTVYAPEQASAIKLDAIRALGAEV 117 (317)
T ss_pred CCCCCCCcHHHHHHHHHHhcchh--hcCceEEE--ECCChHHHHHHHHH-HHhCCCEEEEECCCCCHHHHHHHHHCCCEE
Confidence 33345665566555444211100 01234655 66777777664322 223333556666555444566778999999
Q ss_pred EEEEe
Q 018820 193 KSYRY 197 (350)
Q Consensus 193 ~~v~~ 197 (350)
+.++-
T Consensus 118 ~~~~~ 122 (317)
T PRK06815 118 RLYGG 122 (317)
T ss_pred EEECC
Confidence 98864
No 432
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=44.17 E-value=1.8e+02 Score=25.90 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=43.2
Q ss_pred HHHHHHcCCeEEEEEeecCCCCCC----CHHHH-HHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 182 PKVFTLAGLSVKSYRYYDPATRGL----NFQGL-LEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 182 ~~~~~~~G~~~~~v~~~~~~~~~~----d~~~l-~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
..+++..|.+++.... +..+|.. ..+.. ...+....++.++++|.. ++ .+.+-+.+|++..+++|.-+
T Consensus 145 ~~~l~~~Gy~~v~w~v-~~~Dw~~~~~~~~~~~~~~v~~~~~~g~IiLlHd~--~~----~t~~aL~~ii~~lk~~Gy~f 217 (224)
T TIGR02884 145 LAYTKELGYYTVFWSL-AFKDWKVDEQPGWQYAYKQIMKKIHPGAILLLHAV--SK----DNAEALDKIIKDLKEQGYTF 217 (224)
T ss_pred HHHHHHcCCcEEeccc-cCcccCCCCCCCHHHHHHHHHhcCCCCcEEEEECC--CC----CHHHHHHHHHHHHHHCCCEE
Confidence 4456678998877665 4444543 23333 334444455677777753 22 25788999999999988654
Q ss_pred E
Q 018820 257 F 257 (350)
Q Consensus 257 i 257 (350)
+
T Consensus 218 v 218 (224)
T TIGR02884 218 K 218 (224)
T ss_pred E
Confidence 4
No 433
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=43.18 E-value=2.6e+02 Score=26.21 Aligned_cols=49 Identities=6% Similarity=0.007 Sum_probs=29.7
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++.+++..+.. . +.+++++. .. ..++-++|.++|+++|+.++==++..-
T Consensus 79 ~~~l~e~~~~g-v-k~avI~s~-Gf------~~~~~~~l~~~a~~~girvlGPNc~Gi 127 (291)
T PRK05678 79 ADAILEAIDAG-I-DLIVCITE-GI------PVLDMLEVKAYLERKKTRLIGPNCPGI 127 (291)
T ss_pred HHHHHHHHHCC-C-CEEEEECC-CC------CHHHHHHHHHHHHHcCCEEECCCCCcc
Confidence 45556655433 2 23445443 22 245456899999999999996555433
No 434
>PRK08329 threonine synthase; Validated
Probab=43.16 E-value=2e+02 Score=27.44 Aligned_cols=54 Identities=11% Similarity=0.121 Sum_probs=31.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++. .-+...-.-.|++|.-+-..-...++..|++++.++-
T Consensus 105 ~~vv~--aSsGN~g~alA~-~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 105 NEVVI--DSSGNAALSLAL-YSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred CEEEE--ECCCcHHHHHHH-HHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 45665 667777777643 2222222245566554433345667789999988853
No 435
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=43.13 E-value=1.4e+02 Score=28.23 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=34.2
Q ss_pred ccCCcEEEEecCCchhHHHHHHHHHHHhcCC-C-EEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 138 IRENRVTTVQCLSGTGSLRVGAEFLARHYHQ-R-TIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g-d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+++...++ -..+|+-++.++ +.+.. .| + .+++|+-.-.....+++.+|++++.+|-
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 33555443 355566677663 33332 34 3 3445554555667889999999999876
No 436
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=43.13 E-value=2.9e+02 Score=26.01 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=50.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC---hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN---HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
.+-|++ |-||.+-=+..+ +.+.+.|-++++-+-.=.. +...++..| +++.|.+ |=. ..-++..+.+.+++
T Consensus 38 g~~vLI--TGgg~GlGr~ia--lefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~c-dis-~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 38 GEIVLI--TGGGSGLGRLIA--LEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTC-DIS-DREEIYRLAKKVKK 110 (300)
T ss_pred CCEEEE--eCCCchHHHHHH--HHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEe-cCC-CHHHHHHHHHHHHH
Confidence 444554 555544335532 3445567666554332222 233344446 7777777 321 11134444444444
Q ss_pred CCCCcEEEEecCCCC---CCCCCCCHHHHHHHHHH
Q 018820 217 APAGAIVLLHACAHN---PTGVDPTLQQWERIRQL 248 (350)
Q Consensus 217 ~~~~~~~l~~~~p~N---PTG~~~s~~~~~~i~~~ 248 (350)
. -+.+-+++||..= -.....+.+++++..++
T Consensus 111 e-~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 111 E-VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred h-cCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 3 2345566666432 23345678888776664
No 437
>smart00642 Aamy Alpha-amylase domain.
Probab=42.16 E-value=32 Score=29.25 Aligned_cols=28 Identities=11% Similarity=0.311 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
+.++++++++.|+++|+-||.|-+....
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4799999999999999999999876543
No 438
>PRK06721 threonine synthase; Reviewed
Probab=41.98 E-value=2.7e+02 Score=26.70 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=39.2
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC-CCChHHHHHHcCCeEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT-WGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~-y~~~~~~~~~~G~~~~~ 194 (350)
+.|.-..|.+........... .+.|+. ..+|..+..++.. -+...-.-.|++|... ...-...++..|++++.
T Consensus 54 ptGS~KdR~a~~~i~~a~~~g---~~~vV~--aSsGN~G~alA~~-aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~ 127 (352)
T PRK06721 54 PTGSFKDRGMVMAVAKAKEEG---SEAIIC--ASTGNTSASAAAY-AARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIIS 127 (352)
T ss_pred CccchHHHHHHHHHHHHHHCC---CCEEEE--ECCcHHHHHHHHH-HHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEE
Confidence 356666666554442111111 234444 5567777766431 1222222355565543 23456677899999988
Q ss_pred EE
Q 018820 195 YR 196 (350)
Q Consensus 195 v~ 196 (350)
++
T Consensus 128 ~~ 129 (352)
T PRK06721 128 IE 129 (352)
T ss_pred EC
Confidence 75
No 439
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=40.71 E-value=1.9e+02 Score=26.96 Aligned_cols=17 Identities=12% Similarity=0.077 Sum_probs=13.1
Q ss_pred hHHHHHHcCCeEEEEEe
Q 018820 181 HPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~ 197 (350)
-...++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 35567899999988864
No 440
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=39.92 E-value=1.6e+02 Score=26.39 Aligned_cols=71 Identities=23% Similarity=0.226 Sum_probs=51.5
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC---CCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP---TGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP---TG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
...+++.+|+++. .|+ |+.|.+.+.+.+-...-+.+++=+.-.-=+ .|..++.+-.+++..+.+++++-+.
T Consensus 104 ve~lc~~lGl~~~-~PL-----Wg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~~~lGr~i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 104 VERLCEELGLKVY-APL-----WGRDPEELLEEMVEAGFEAIIVAVSAEGLDESWLGRRIDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred HHHHHHHhCCEEe-ecc-----cCCCHHHHHHHHHHcCCeEEEEEEeccCCChHHhCCccCHHHHHHHHHHHHhcCCCcc
Confidence 3567788888764 366 778888888776655333444444444555 7889999999999999999998554
No 441
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=39.55 E-value=47 Score=34.57 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=33.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
|++.-| ++++++++++.|.++||-||.|-+|.-|..+
T Consensus 206 p~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 666666 8999999999999999999999999998764
No 442
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=39.55 E-value=33 Score=32.60 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
+.+-.+|++|+++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45678999999999999999999887
No 443
>PRK06500 short chain dehydrogenase; Provisional
Probab=39.11 E-value=2.6e+02 Score=24.37 Aligned_cols=48 Identities=15% Similarity=-0.028 Sum_probs=24.3
Q ss_pred cCCchhHHH-HHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 148 CLSGTGSLR-VGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 148 t~G~~~al~-l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
..|+++++- .++. .+...|..|++..-.-.......+..|.++..+.+
T Consensus 11 ItGasg~iG~~la~--~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 11 ITGGTSGIGLETAR--QFLAEGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred EeCCCchHHHHHHH--HHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 556666662 2222 23456766766543322233334455666666665
No 444
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional
Probab=38.93 E-value=2.7e+02 Score=26.29 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=46.4
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
...++...|+..+..- +. .++.++.+.++++ .++..+|..-+|+. ||.-.+.++-.++.++|.+.+.|++.
T Consensus 163 i~~i~~a~g~~yVA~~--~~----~~~~~~~~~i~~A~~~~Gps~I~~~spC~-~~~~~~~~~~~~~~k~Av~tg~wply 235 (300)
T PRK11864 163 VPDIMAAHKVPYVATA--SI----AYPEDFIRKLKKAKEIRGFKFIHLLAPCP-PGWRFDPDKTIEIARLAVETGVWPLF 235 (300)
T ss_pred HHHHHHHcCCCEEEEE--eC----CCHHHHHHHHHHHHhCCCCEEEEEeCCCC-CCCCcChHHHHHHHHHHHHcCCceEE
Confidence 3556667777544321 11 2455555554432 23444555555554 79988999999999999999999986
Q ss_pred c
Q 018820 259 D 259 (350)
Q Consensus 259 D 259 (350)
.
T Consensus 236 e 236 (300)
T PRK11864 236 E 236 (300)
T ss_pred E
Confidence 5
No 445
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=38.66 E-value=30 Score=24.22 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=22.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
+..|++...+.+|++++.+-..+.+.+.+.+..|
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 4667889999999999999988888887777665
No 446
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=38.54 E-value=28 Score=28.42 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=38.1
Q ss_pred HHHHcCCeEEEEEeecCCCCCCC---HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCH------HHHHHHHHHHHhcC
Q 018820 184 VFTLAGLSVKSYRYYDPATRGLN---FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTL------QQWERIRQLMRSKG 253 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~~~~~~~d---~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~------~~~~~i~~~~~~~~ 253 (350)
.+...|++++.+|+ ... .++ .+.+.+.+...+ ++ +++||.-.+=||..+-. -..++|++.+++.|
T Consensus 52 ~a~~~gl~y~~iPv-~~~--~~~~~~v~~f~~~~~~~~-~p-vL~HC~sG~Rt~~l~al~~~~~g~~~~~i~~~~~~~G 125 (135)
T TIGR01244 52 AAEAAGVTYHHQPV-TAG--DITPDDVETFRAAIGAAE-GP-VLAYCRSGTRSSLLWGFRQAAEGVPVEEIVRRAQAAG 125 (135)
T ss_pred HHHHCCCeEEEeec-CCC--CCCHHHHHHHHHHHHhCC-CC-EEEEcCCChHHHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 44568999999998 332 344 555556565433 33 78888777666653211 12245556666554
No 447
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional
Probab=38.48 E-value=3.1e+02 Score=25.83 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=45.8
Q ss_pred HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 182 PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 182 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
..++...|+..+..- .. -++.++.+.++++ .+++.+|..-+|+ |||.-.+.++-.++.++|.+.+.|++..
T Consensus 168 ~~Ia~a~g~~YVA~~--~~----~~~~~l~~~i~~A~~~~Gps~I~v~sPC-~~~~~~~~~~~~~~~klAvetg~~plye 240 (299)
T PRK11865 168 PLIMAAHGIPYVATA--SI----GYPEDFMEKVKKAKEVEGPAYIQVLQPC-PTGWGFPPEKTIEIGRLAVETGYWPLFE 240 (299)
T ss_pred HHHHHHcCCCEEEEE--eC----CCHHHHHHHHHHHHhCCCCEEEEEECCC-CCCCCCCHHHHHHHHHHHHhcCceeEEE
Confidence 445555666544321 11 2556666655542 2445455555555 5688889999999999999999999865
No 448
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=38.34 E-value=3.4e+02 Score=25.48 Aligned_cols=53 Identities=21% Similarity=0.108 Sum_probs=30.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++. .+. ..-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 52 ~~vv~--aSsGN~g~alA~--~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 52 VHVVC--SSGGNAGLAAAY--AARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred CeEEE--eCCcHHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 34554 566777776643 222 222234555554333446678899999988753
No 449
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=38.30 E-value=2.6e+02 Score=26.93 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=43.2
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
+.-+.|.-..|-+......-.... ....|+. +.+|..+..++... +...-.-.|++|.-+-..-...++..|+++
T Consensus 23 ~~~ptgS~K~R~a~~~i~~~~~~~--~~~~vv~--aSsGN~g~alA~~a-~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V 97 (380)
T TIGR01127 23 NLQKTGSFKIRGALNKIANLSEDQ--RQRGVVA--ASAGNHAQGVAYAA-KKFGIKAVIVMPESAPPSKVKATKSYGAEV 97 (380)
T ss_pred CCCCCCCcHHHHHHHHHHhcchhc--cCCEEEE--ECCCHHHHHHHHHH-HHcCCCEEEEEcCCCcHHHHHHHHHCCCEE
Confidence 334457666676665552211111 0223555 77788888774321 222222456666544334566788999999
Q ss_pred EEEE
Q 018820 193 KSYR 196 (350)
Q Consensus 193 ~~v~ 196 (350)
+.++
T Consensus 98 ~~~~ 101 (380)
T TIGR01127 98 ILHG 101 (380)
T ss_pred EEEC
Confidence 8753
No 450
>PRK08198 threonine dehydratase; Provisional
Probab=37.13 E-value=2.1e+02 Score=27.92 Aligned_cols=80 Identities=18% Similarity=0.067 Sum_probs=42.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
++.-+.|.-..|-+......-.... ..+.|+. ..+|..+..++..- +.+.-.-.|++|.-+-..-...++..|++
T Consensus 44 E~~nptGS~K~R~a~~~i~~~~~~~--~~~~vv~--aSsGN~g~alA~~a-~~~G~~~~iv~p~~~~~~k~~~~~~~GA~ 118 (404)
T PRK08198 44 ENLQRTGSFKIRGAYNKIASLSEEE--RARGVVA--ASAGNHAQGVAYAA-SLLGIKATIVMPETAPLSKVKATRSYGAE 118 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHhccHhh--cCCEEEE--ECCCHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHhCCCE
Confidence 3444467767776665542211111 1345665 67788888774321 22222245555544322334567889999
Q ss_pred EEEEE
Q 018820 192 VKSYR 196 (350)
Q Consensus 192 ~~~v~ 196 (350)
++.++
T Consensus 119 Vi~~~ 123 (404)
T PRK08198 119 VVLHG 123 (404)
T ss_pred EEEEC
Confidence 98874
No 451
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=36.92 E-value=2.3e+02 Score=26.07 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=44.2
Q ss_pred HHHHHcCCeEEEEEeecCCCC-CCCHHHHHHHhh-cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 183 KVFTLAGLSVKSYRYYDPATR-GLNFQGLLEDLG-SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~-~~d~~~l~~~l~-~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.+++..|.+++...+ +..+| ..+.+.+.+.+. ....+.++++|... .+.+-+.+|++..+++|.-++
T Consensus 193 ~~l~~~G~~~v~Wsv-d~~Dw~~~~~~~i~~~v~~~~~~G~IILmHd~~-------~T~~aL~~iI~~Lk~kGy~fv 261 (268)
T TIGR02873 193 QIAADLQMGTIMWTV-DTIDWKNPSPSVMVNRVLSKIHPGAMVLMHPTA-------SSTEGLEEMITIIKEKGYKIG 261 (268)
T ss_pred HHHHHCCCeEEEecc-CCCCCCCCCHHHHHHHHHhcCCCCcEEEEcCCc-------cHHHHHHHHHHHHHHCCCEEE
Confidence 346678999887666 55444 346666665543 33456777776432 257889999999999885543
No 452
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=36.91 E-value=29 Score=31.71 Aligned_cols=30 Identities=10% Similarity=0.271 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++.....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhhccccccceEEEeeecccccc
Confidence 489999999999999999999999875543
No 453
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=36.75 E-value=2e+02 Score=28.99 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=35.3
Q ss_pred HHHcC-CeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEE
Q 018820 185 FTLAG-LSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFF 258 (350)
Q Consensus 185 ~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~ 258 (350)
++..| .++..++. ....++.+.+.+.+.+..+. +|.+++ .+.+.....++++.+|+. ++.||.
T Consensus 32 L~~~G~~~V~iiD~---~~~~~~~~~~~~~l~~~~pd--vVgis~------~t~~~~~a~~~~~~~k~~~P~~~iV~ 97 (497)
T TIGR02026 32 LLDAGYHDVTFLDA---MTGPLTDEKLVERLRAHCPD--LVLITA------ITPAIYIACETLKFARERLPNAIIVL 97 (497)
T ss_pred HHhcCCcceEEecc---cccCCCHHHHHHHHHhcCcC--EEEEec------CcccHHHHHHHHHHHHHHCCCCEEEE
Confidence 45667 45555543 33346667777766553222 444432 334566667777877764 666654
No 454
>PLN02417 dihydrodipicolinate synthase
Probab=36.60 E-value=3e+02 Score=25.41 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=22.3
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
+++-++|. -||+.++.+.+++|+ +-.++.=|=|.
T Consensus 128 i~lYn~P~-~tg~~l~~~~l~~l~---~~pni~giKds 161 (280)
T PLN02417 128 TIIYNVPG-RTGQDIPPEVIFKIA---QHPNFAGVKEC 161 (280)
T ss_pred EEEEEChh-HhCcCCCHHHHHHHh---cCCCEEEEEeC
Confidence 44444444 489999999888775 33466666664
No 455
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=36.07 E-value=2.3e+02 Score=22.81 Aligned_cols=59 Identities=27% Similarity=0.376 Sum_probs=35.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 230 HNPTGVDPTLQQWERIRQLMRS-KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
.||-| ++|.+-|+.|.+.+.+ ....|++| | ++|...+....-.....+++ ||-||..+=
T Consensus 40 ~NPpG-~It~el~~ai~~a~~~~~~~~I~V~--------G--EEDL~~lPail~aP~gs~V~------YGQP~eGvV 99 (121)
T PF04019_consen 40 KNPPG-TITEELIEAIKKALESGKPVVIFVD--------G--EEDLAVLPAILYAPEGSVVL------YGQPGEGVV 99 (121)
T ss_pred ECCCC-cccHHHHHHHHHHHhCCCCEEEEEe--------C--hHHHHHHHHHHhCCCCCEEE------ECCCCCeEE
Confidence 78888 4678889998888744 45666666 3 25654443332222233333 577885443
No 456
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=35.53 E-value=1.9e+02 Score=22.81 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=40.7
Q ss_pred hHHHHHH-cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 181 HPKVFTL-AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 181 ~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
....++. .|+++..|+. .+.+.. ..+.+.+.... +-++++.| +|-|......+-..|.+.|.++++.++.
T Consensus 36 Ta~~L~~~~Gi~v~~vk~-~~~~g~---~~i~~~i~~g~---i~~VInt~-~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 36 TGLLIQEATGLTVNRMKS-GPLGGD---QQIGALIAEGE---IDAVIFFR-DPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred HHHHHHHhhCCcEEEEec-CCCCch---hHHHHHHHcCc---eeEEEEcC-CCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 4455565 7998888843 222222 34666665532 23444443 3324444345677889999999988764
No 457
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=35.50 E-value=2.6e+02 Score=25.75 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=32.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++... +.+.-.-.|+++.-.-..-...++..|++++.++-
T Consensus 54 ~~vv~--~SsGN~g~alA~~a-~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 54 TTIIE--PTSGNTGIGLAMVA-AAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred CEEEE--eCCChHHHHHHHHH-HHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34555 77788887774322 22222244555543344455677889999998864
No 458
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]
Probab=35.11 E-value=81 Score=30.81 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=47.5
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+++....+.||-..-..++.+.|.++|+++|+.-++|.--++... -.-+..-+..++.-++.-.|=+-+.|
T Consensus 59 ~~~~~DH~vPt~~~~~a~~~~~lr~~~ke~Gi~~~~~~g~~GI~H-----~v~pE~G~~~PG~~Iv~gDSHT~T~G 129 (423)
T COG0065 59 TVATFDHNVPTPDIKAAEQQKELRENAKEFGIVNFYDVGDQGIVH-----QVGPEQGLTLPGMTIVGGDSHTCTHG 129 (423)
T ss_pred eEEEecCCCCCccHHHHHHHHHHHHHHHHhCCeeeecCCCCcEEE-----EEeccccccCCCcEEEecccCcccch
Confidence 555566677999888899999999999999998887753344332 11122223334555666667777765
No 459
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=34.84 E-value=40 Score=35.01 Aligned_cols=36 Identities=14% Similarity=0.315 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+|++|++ ..++++++++.|.++|+-||.|-+|....
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 4555554 46899999999999999999999986553
No 460
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=34.62 E-value=39 Score=26.72 Aligned_cols=60 Identities=18% Similarity=0.213 Sum_probs=29.7
Q ss_pred cCC-CEEEEcCCCC--------CChHHHHHHcCCeEEEEEeecCCC-CCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 166 YHQ-RTIYIPQPTW--------GNHPKVFTLAGLSVKSYRYYDPAT-RGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 166 ~~g-d~Vlv~~P~y--------~~~~~~~~~~G~~~~~v~~~~~~~-~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
..| ++|+.-.|.- ......++.+|++.+.+|+ .... ..-+++.|.+.+...++ + ++++|-
T Consensus 25 ~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv-~~~~~~~~~v~~f~~~l~~~~~-P-vl~hC~ 94 (110)
T PF04273_consen 25 AQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPV-DGGAITEEDVEAFADALESLPK-P-VLAHCR 94 (110)
T ss_dssp HCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE-----TTT--HHHHHHHHHHHHTTTT-S-EEEE-S
T ss_pred HCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeec-CCCCCCHHHHHHHHHHHHhCCC-C-EEEECC
Confidence 345 6777765543 2344678899999999999 4322 11235555566666543 4 667664
No 461
>PRK06381 threonine synthase; Validated
Probab=33.54 E-value=3.3e+02 Score=25.44 Aligned_cols=76 Identities=12% Similarity=-0.021 Sum_probs=41.0
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
+.|.-..|.+......-...- .+.|+. ..+|..++.++... +...-.-.|+++.-.-..-...++..|++++.+
T Consensus 42 ptGS~K~R~a~~~l~~a~~~g---~~~lv~--aSsGN~g~alA~~a-a~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~ 115 (319)
T PRK06381 42 PTGTQKDRIAEAHVRRAMRLG---YSGITV--GTCGNYGASIAYFA-RLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYV 115 (319)
T ss_pred CccCcHHHHHHHHHHHHHHcC---CCEEEE--eCCcHHHHHHHHHH-HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEc
Confidence 356666666654432111111 345554 56677777664321 222222455565544334456788999999988
Q ss_pred Ee
Q 018820 196 RY 197 (350)
Q Consensus 196 ~~ 197 (350)
+-
T Consensus 116 ~~ 117 (319)
T PRK06381 116 DG 117 (319)
T ss_pred CC
Confidence 63
No 462
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=33.41 E-value=2.2e+02 Score=25.32 Aligned_cols=49 Identities=18% Similarity=0.112 Sum_probs=27.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
..+|..+..++... +...-.-.|+++.-.-..-...++..|++++.++-
T Consensus 56 ~ssGN~g~alA~~a-~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 56 STGGNTGIALAAAA-ARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred eCCcHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 55667777664322 22222234555544433445567789999988754
No 463
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=33.16 E-value=3.9e+02 Score=26.34 Aligned_cols=151 Identities=16% Similarity=0.128 Sum_probs=80.8
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
..|||..+|...+. .-+...++|+...+...-....+-+.-..+.++|+.+.+. .+ +-+ ||
T Consensus 60 rtKVNaNIGtS~~~---~d~~~E~~K~~~A~~~GADtiMDLStGgdl~~iR~~il~~---s~--------vpv-----GT 120 (423)
T TIGR00190 60 RTKVNANIGTSADT---SDIEEEVEKALIAIKYGADTVMDLSTGGDLDEIRKAILDA---VP--------VPV-----GT 120 (423)
T ss_pred eeEEEeeecCCCCC---CCHHHHHHHHHHHHHcCCCeEeeccCCCCHHHHHHHHHHc---CC--------CCc-----cC
Confidence 35899999987443 2346667777666542212223333334467888777543 11 111 22
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcCCeEEEEEeecCCCCCCCHHHHHHHhhcC--CC-----Cc-
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--PA-----GA- 221 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~-----~~- 221 (350)
--++-++ . ... ++.+ +-+...+...++ .-|+...++.+ +++.+.++..-+.. .. ++
T Consensus 121 VPiYqa~--~-~~~-~~~~---~mt~d~~~~~ie~qa~dGVDfmTiH~------Gi~~~~~~~~~~~~R~~giVSRGGs~ 187 (423)
T TIGR00190 121 VPIYQAA--E-KVH-GAVE---DMDEDDMFRAIEKQAKDGVDFMTIHA------GVLLEYVERLKRSGRITGIVSRGGAI 187 (423)
T ss_pred ccHHHHH--H-Hhc-CChh---hCCHHHHHHHHHHHHHhCCCEEEEcc------chhHHHHHHHHhCCCccCeecCcHHH
Confidence 2232211 1 111 1211 222233333333 35888888876 56766666654321 00 00
Q ss_pred --EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 222 --IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 222 --~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
.-+++++--||- -+++.+|+++|++||+.+=.=+
T Consensus 188 ~~~WM~~~~~ENPl-----ye~fD~lLeI~~~yDVtlSLGD 223 (423)
T TIGR00190 188 LAAWMLHHHKENPL-----YKNFDYILEIAKEYDVTLSLGD 223 (423)
T ss_pred HHHHHHHcCCcCch-----HHHHHHHHHHHHHhCeeeeccC
Confidence 123456778888 6889999999999998765444
No 464
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=33.14 E-value=2.3e+02 Score=26.44 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=17.4
Q ss_pred CEEEEcCCC-CCChHHHHHHcCCeEEEEE
Q 018820 169 RTIYIPQPT-WGNHPKVFTLAGLSVKSYR 196 (350)
Q Consensus 169 d~Vlv~~P~-y~~~~~~~~~~G~~~~~v~ 196 (350)
-.|+++... -.....+++.+|.+++.++
T Consensus 84 ~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~ 112 (311)
T TIGR01275 84 AVLVLREKEELNGNLLLDKLMGAETRVYS 112 (311)
T ss_pred eEEEecCCccCCCCHHHHHHcCCEEEEEC
Confidence 445565532 2233555689999998775
No 465
>PRK07048 serine/threonine dehydratase; Validated
Probab=32.79 E-value=4e+02 Score=25.00 Aligned_cols=54 Identities=20% Similarity=0.071 Sum_probs=33.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++... +.+.-.-.|+++.-.-..-...++..|++++.++-
T Consensus 73 ~~vv~--aSsGN~g~alA~~a-~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~ 126 (321)
T PRK07048 73 AGVVT--FSSGNHAQAIALSA-RLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDR 126 (321)
T ss_pred CcEEE--eCCCHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34555 66778787774322 22232245666665544445667799999998863
No 466
>COG1679 Predicted aconitase [General function prediction only]
Probab=32.71 E-value=81 Score=30.56 Aligned_cols=34 Identities=21% Similarity=0.517 Sum_probs=25.9
Q ss_pred hhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 018820 214 LGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 214 l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~ 253 (350)
+......+-++.+.||| .+.+|+++|+++++.++
T Consensus 283 l~~~~~epdli~iGcPH------aS~~E~~~la~~l~~r~ 316 (403)
T COG1679 283 LNTADGEPDLIALGCPH------ASLEELRRLAELLKGRK 316 (403)
T ss_pred hhcCCCCCCEEEeCCCC------CCHHHHHHHHHHHhccC
Confidence 33333345589999999 78899999999998754
No 467
>PRK11579 putative oxidoreductase; Provisional
Probab=32.47 E-value=4.1e+02 Score=25.13 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=47.2
Q ss_pred CCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcE
Q 018820 176 PTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLL 255 (350)
Q Consensus 176 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 255 (350)
+.|..+..++....++++.+.. .. ..-.+...++++.... +++ --|.. .+.++.++|+++|+++|+.
T Consensus 51 ~~~~~~~ell~~~~vD~V~I~t-p~---~~H~~~~~~al~aGkh---Vl~----EKPla--~t~~ea~~l~~~a~~~g~~ 117 (346)
T PRK11579 51 TVVSEPQHLFNDPNIDLIVIPT-PN---DTHFPLAKAALEAGKH---VVV----DKPFT--VTLSQARELDALAKSAGRV 117 (346)
T ss_pred ceeCCHHHHhcCCCCCEEEEcC-Cc---HHHHHHHHHHHHCCCe---EEE----eCCCC--CCHHHHHHHHHHHHHhCCE
Confidence 3567788888766777777654 21 2346666666665322 332 44554 4678999999999999988
Q ss_pred EEEc
Q 018820 256 PFFD 259 (350)
Q Consensus 256 ii~D 259 (350)
+.+-
T Consensus 118 l~v~ 121 (346)
T PRK11579 118 LSVF 121 (346)
T ss_pred EEEE
Confidence 7654
No 468
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=31.88 E-value=3.5e+02 Score=26.18 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=42.1
Q ss_pred cCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 148 CLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
..+|..++.++. .+. ..-.-.|+++.-+-..-...++.+|++++.++- .. +..-..+...+.+++.+. .+++
T Consensus 117 aSsGN~G~alA~--~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~-~~-~~~~~~~~a~~l~~~~~~---~~~~ 189 (368)
T PLN02556 117 PTSGNMGISLAF--MAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP-TK-GMGGTVKKAYELLESTPD---AFML 189 (368)
T ss_pred eCCchHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC-CC-CccHHHHHHHHHHHhcCC---CCcc
Confidence 677888887743 332 222244555554444456678899999988753 11 111223344444443333 4444
Q ss_pred cCCCCCCC
Q 018820 227 ACAHNPTG 234 (350)
Q Consensus 227 ~~p~NPTG 234 (350)
+..+||-+
T Consensus 190 ~q~~np~~ 197 (368)
T PLN02556 190 QQFSNPAN 197 (368)
T ss_pred CCCCCHHH
Confidence 44557654
No 469
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=31.75 E-value=34 Score=32.18 Aligned_cols=66 Identities=18% Similarity=0.243 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH-hcCcEEEEccCCCC--CCCCC--CCCchHHHHHHhh--cCCcEEEEe----ccccccCccCccee
Q 018820 239 LQQWERIRQLMR-SKGLLPFFDSAYQG--FASGS--LDSDAQSVRMFVA--DGGECFIAQ----SYAKNLGLYGERVG 305 (350)
Q Consensus 239 ~~~~~~i~~~~~-~~~~~ii~DeaY~~--~~~~~--~~~~~~~~~~~~~--~~~~vi~~~----S~SK~~gl~G~RvG 305 (350)
..++++|++||. ..+-+||+||+... +..+. ..+.......+.. ...+++|+. |=-||++ +=-|+|
T Consensus 158 ~sRl~ql~~W~g~dfdgvivfDEcH~akn~~~~~~~~sk~g~avl~LQ~~LP~ARvvY~SATgasep~Nma-Ym~RLG 234 (303)
T PF13872_consen 158 RSRLDQLVDWCGEDFDGVIVFDECHKAKNLSSGSKKPSKTGIAVLELQNRLPNARVVYASATGASEPRNMA-YMSRLG 234 (303)
T ss_pred cchHHHHHHHHhcCCCceEEeccchhcCCCCccCccccHHHHHHHHHHHhCCCCcEEEecccccCCCceee-eeeecc
Confidence 567899999994 57889999999864 32211 0011112222222 124788775 2336676 557777
No 470
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=31.28 E-value=2.7e+02 Score=23.92 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=45.1
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC-CCCCCCCCCCchHHHHHHhhcCC-c-EEEEeccccccCccC
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY-QGFASGSLDSDAQSVRMFVADGG-E-CFIAQSYAKNLGLYG 301 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY-~~~~~~~~~~~~~~~~~~~~~~~-~-vi~~~S~SK~~gl~G 301 (350)
+-.+..||| .++-+|+-+++.-+..-=+++.+||.= .+...| ...+..++...+ + +=.+.=.|++.+.-|
T Consensus 28 IS~S~GNPT--~lsG~elV~lIk~a~~DPV~VMfDD~G~~g~G~G-----E~Al~~v~~h~~IeVLG~iAVASnT~~~~g 100 (180)
T PF14097_consen 28 ISQSAGNPT--PLSGEELVELIKQAPHDPVLVMFDDKGFIGEGPG-----EQALEYVANHPDIEVLGAIAVASNTHGAEG 100 (180)
T ss_pred EeccCCCCC--cCCHHHHHHHHHhCCCCCEEEEEeCCCCCCCCcc-----HHHHHHHHcCCCceEEEEEEEEecCCCCCc
Confidence 445679999 577887777766665455888888842 122222 145555554332 2 222333466666678
Q ss_pred cceeEEE
Q 018820 302 ERVGALS 308 (350)
Q Consensus 302 ~RvG~l~ 308 (350)
.|+=+-+
T Consensus 101 ~~VD~si 107 (180)
T PF14097_consen 101 TKVDVSI 107 (180)
T ss_pred eEeEEEE
Confidence 8877644
No 471
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=31.05 E-value=1.2e+02 Score=23.43 Aligned_cols=19 Identities=26% Similarity=0.379 Sum_probs=9.2
Q ss_pred CHHHHHHHHHHHHhcCcEE
Q 018820 238 TLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~i 256 (350)
+.++.++|.+.+++++..+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~ 116 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKV 116 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHhCCEE
Confidence 4445555555555544433
No 472
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=30.85 E-value=1.5e+02 Score=26.29 Aligned_cols=41 Identities=20% Similarity=0.372 Sum_probs=27.9
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
.+..+-++....+++-++.-||.++ ++++++|++|..+|.=
T Consensus 97 l~~~~i~~~DVliviSnSGrNpvpi--------e~A~~~rekGa~vI~v 137 (243)
T COG4821 97 LHRLQIRPNDVLIVISNSGRNPVPI--------EVAEYAREKGAKVIAV 137 (243)
T ss_pred HHHhcCCCCCEEEEEeCCCCCCcch--------HHHHHHHhcCCeEEEE
Confidence 3333334555566666778899873 5688899999888854
No 473
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=30.40 E-value=4.9e+02 Score=24.84 Aligned_cols=126 Identities=12% Similarity=0.115 Sum_probs=64.3
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEE-EEcCCCCC------ChHHHHHHcCC
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTI-YIPQPTWG------NHPKVFTLAGL 190 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~V-lv~~P~y~------~~~~~~~~~G~ 190 (350)
+..+|++.+.++. +.... .-+-|+. .+||.-+..++..+..... -..+ +..++.|. +...+++..|+
T Consensus 41 ~~~~l~~l~~~~k-~~~~~--~yD~iV~--lSGGkDSs~la~ll~~~~g-l~~l~vt~~~~~~~e~~~~n~~~~~~~lgv 114 (343)
T TIGR03573 41 REKELEELVDKIK-KKGGG--RYDCIIG--VSGGKDSTYQAHVLKKKLG-LNPLLVTVDPGWNTELGVKNLNNLIKKLGF 114 (343)
T ss_pred HHHHHHHHHHHHH-hcCCC--CCCEEEE--CCCCHHHHHHHHHHHHHhC-CceEEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4456666665553 22111 0233333 7777777766432212222 1333 45567665 34445567898
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE-----ccCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF-----DSAYQGF 265 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~-----DeaY~~~ 265 (350)
+.+.+.. |.+.+.+..... +- +..+|.... .......+.++|+++|+-+|. ||.|.++
T Consensus 115 d~~~i~~--------d~~~~~~l~~~~-----~~---~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgGy 177 (343)
T TIGR03573 115 DLHTITI--------NPETFRKLQRAY-----FK---KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEYGGD 177 (343)
T ss_pred CeEEEeC--------CHHHHHHHHHHH-----Hh---ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhcCCc
Confidence 8877755 344444333221 11 122333222 244567888999999987775 4555553
Q ss_pred C
Q 018820 266 A 266 (350)
Q Consensus 266 ~ 266 (350)
.
T Consensus 178 ~ 178 (343)
T TIGR03573 178 S 178 (343)
T ss_pred c
Confidence 3
No 474
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=29.89 E-value=2.6e+02 Score=21.52 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=39.5
Q ss_pred HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEE
Q 018820 183 KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFF 258 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~ 258 (350)
.+++..|.++..+.. ..+.+.+.+.+.+...+ ++.++.. ...+.+...++++.+|+. ++.++.
T Consensus 22 ~~l~~~G~~v~~~d~------~~~~~~l~~~~~~~~pd--~V~iS~~-----~~~~~~~~~~l~~~~k~~~p~~~iv~ 86 (121)
T PF02310_consen 22 AYLRKAGHEVDILDA------NVPPEELVEALRAERPD--VVGISVS-----MTPNLPEAKRLARAIKERNPNIPIVV 86 (121)
T ss_dssp HHHHHTTBEEEEEES------SB-HHHHHHHHHHTTCS--EEEEEES-----SSTHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHCCCeEEEECC------CCCHHHHHHHHhcCCCc--EEEEEcc-----CcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 345677988887755 23457787777654332 4444433 234577788888888875 666664
No 475
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=29.79 E-value=4.2e+02 Score=24.25 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=48.0
Q ss_pred CEEEEcCCCCCChHH---HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 169 RTIYIPQPTWGNHPK---VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 169 d~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
.+.++-+--|+.+.. .++..|.++++|.+...+......+.+.+.+... + +.+++| |--+.+.+|--++
T Consensus 10 SRl~~Gtgky~s~~~~~~ai~aSg~~ivTva~rR~~~~~~~~~~~~~~i~~~-~---~~~lpN----TaG~~ta~eAv~~ 81 (248)
T cd04728 10 SRLLLGTGKYPSPAIMKEAIEASGAEIVTVALRRVNIGDPGGESFLDLLDKS-G---YTLLPN----TAGCRTAEEAVRT 81 (248)
T ss_pred cceEEecCCCCCHHHHHHHHHHhCCCEEEEEEEecccCCCCcchHHhhcccc-C---CEECCC----CCCCCCHHHHHHH
Confidence 345566666766644 4557899999998843321122345566666431 2 455543 4457789999999
Q ss_pred HHHHHhc
Q 018820 246 RQLMRSK 252 (350)
Q Consensus 246 ~~~~~~~ 252 (350)
++++++-
T Consensus 82 a~lare~ 88 (248)
T cd04728 82 ARLAREA 88 (248)
T ss_pred HHHHHHH
Confidence 9999983
No 476
>PRK08197 threonine synthase; Validated
Probab=29.60 E-value=4.4e+02 Score=25.60 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=32.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..+++ .-+...-.-.|++|.-.-..-...++..|++++.++-
T Consensus 128 ~~vv~--aSsGN~g~alA~-~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~ 181 (394)
T PRK08197 128 KHLAM--PTNGNAGAAWAA-YAARAGIRATIFMPADAPEITRLECALAGAELYLVDG 181 (394)
T ss_pred CEEEE--eCCcHHHHHHHH-HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 45665 667777877753 2222233345566543433445667889999998853
No 477
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=29.50 E-value=2.9e+02 Score=26.10 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=37.1
Q ss_pred ChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 180 NHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 180 ~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.+..+|+.+|+..+- + ...+..+..+.|.+++.+-+.+. +++++|--|.+ ...++.+++++.+++.+|
T Consensus 107 g~~~lf~~~Gv~~vi-~--ggqt~nPS~~dl~~Ai~~~~a~~-VivLPNn~ni~------~aa~qa~~~~~~~~v~Vi 174 (313)
T PF13684_consen 107 GLAELFRSLGVDVVI-S--GGQTMNPSTEDLLNAIEKVGADE-VIVLPNNKNII------LAAEQAARLSEDKNVVVI 174 (313)
T ss_pred cHHHHHHhCCCeEEE-e--CCCCCCCCHHHHHHHHHhCCCCe-EEEEeCCchHH------HHHHHHHHHhcCCCEEEE
Confidence 357777778865432 1 22334577888888888754444 44453333332 234455566655554443
No 478
>PLN02565 cysteine synthase
Probab=29.50 E-value=4.4e+02 Score=24.88 Aligned_cols=81 Identities=10% Similarity=0.011 Sum_probs=43.1
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCC--cEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHc
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIREN--RVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLA 188 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~--~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~ 188 (350)
+|.-+.|.-..|-+..-.........+.+. .|+. ..+|..++.++. .+. ..-.-.|++|.-+-..-...++.+
T Consensus 37 E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~--aSsGN~g~alA~--~a~~~G~~~~ivvp~~~~~~k~~~i~~~ 112 (322)
T PLN02565 37 EMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIE--PTSGNTGIGLAF--MAAAKGYKLIITMPASMSLERRIILLAF 112 (322)
T ss_pred cccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEE--ECCChHHHHHHH--HHHHcCCeEEEEeCCCCcHHHHHHHHHc
Confidence 454556766666554443211100001122 2554 778888887743 332 222234555554444556778899
Q ss_pred CCeEEEEE
Q 018820 189 GLSVKSYR 196 (350)
Q Consensus 189 G~~~~~v~ 196 (350)
|++++.++
T Consensus 113 GA~V~~~~ 120 (322)
T PLN02565 113 GAELVLTD 120 (322)
T ss_pred CCEEEEeC
Confidence 99998764
No 479
>PRK07334 threonine dehydratase; Provisional
Probab=29.45 E-value=2.2e+02 Score=27.81 Aligned_cols=76 Identities=17% Similarity=0.017 Sum_probs=41.6
Q ss_pred CCCCcHHHHHHHHHHHh-CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEE
Q 018820 115 PIVGLAEFNKLSAKLIL-GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVK 193 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~-g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 193 (350)
-+.|.-..|-+...... ..+.. ...|+. ..+|..+..++... +...-.-.|++|...-..-...++.+|++++
T Consensus 48 nptGS~KdR~a~~~i~~~~~~~~---~~~vv~--aSsGN~g~alA~~a-~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~ 121 (403)
T PRK07334 48 QFTASFKERGALNKLLLLTEEER---ARGVIA--MSAGNHAQGVAYHA-QRLGIPATIVMPRFTPTVKVERTRGFGAEVV 121 (403)
T ss_pred CCCCCchHHHHHHHHHhcCHHHh---CCcEEE--ECCcHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 34566566655544321 11111 334555 66777787774321 2222224566665544455667889999998
Q ss_pred EEE
Q 018820 194 SYR 196 (350)
Q Consensus 194 ~v~ 196 (350)
.++
T Consensus 122 ~~~ 124 (403)
T PRK07334 122 LHG 124 (403)
T ss_pred EEC
Confidence 764
No 480
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=29.31 E-value=5e+02 Score=24.67 Aligned_cols=138 Identities=11% Similarity=0.113 Sum_probs=64.8
Q ss_pred CCCcHHHHHHHHHHHhC-CCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEE
Q 018820 116 IVGLAEFNKLSAKLILG-ADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVK 193 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g-~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 193 (350)
..|.+.|=+++ | -..+ ..++..+-...|++=-.++..+.+. ...|..++..+.-.......++..|+.+.
T Consensus 37 ~TGi~~LD~~L-----g~GGlp---~G~iteI~G~~GsGKTtLaL~~~~~~~~~g~~v~yId~E~~~~~~~a~~lGvd~~ 108 (321)
T TIGR02012 37 STGSLSLDLAL-----GVGGLP---RGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYARKLGVDID 108 (321)
T ss_pred cCCCHHHHHHh-----cCCCCc---CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEcccchhHHHHHHHcCCCHH
Confidence 35677764433 3 2333 6677765566665555554344332 23454454444433334445677787654
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC---------CCCC--C--H---HHHHHHHHHHHhcCcEEE
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT---------GVDP--T--L---QQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT---------G~~~--s--~---~~~~~i~~~~~~~~~~ii 257 (350)
.+-+..+++..--++.++..++.. ...++++-+-.+=. |-.. . + ..+.+|..+++++++.+|
T Consensus 109 ~l~v~~p~~~eq~l~~~~~li~~~--~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi 186 (321)
T TIGR02012 109 NLLVSQPDTGEQALEIAETLVRSG--AVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAI 186 (321)
T ss_pred HeEEecCCCHHHHHHHHHHHhhcc--CCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 443433322111122222223222 23355554433211 1110 0 1 345678888888887665
Q ss_pred E-ccCCC
Q 018820 258 F-DSAYQ 263 (350)
Q Consensus 258 ~-DeaY~ 263 (350)
+ .++|.
T Consensus 187 ~tNQvr~ 193 (321)
T TIGR02012 187 FINQIRE 193 (321)
T ss_pred EEeccee
Confidence 5 44444
No 481
>COG1204 Superfamily II helicase [General function prediction only]
Probab=29.28 E-value=2.9e+02 Score=29.71 Aligned_cols=58 Identities=12% Similarity=-0.033 Sum_probs=33.8
Q ss_pred CCcEEE-EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCC----CChHH--HHHHcCCeEEEEEe
Q 018820 140 ENRVTT-VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTW----GNHPK--VFTLAGLSVKSYRY 197 (350)
Q Consensus 140 ~~~v~~-~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y----~~~~~--~~~~~G~~~~~v~~ 197 (350)
.+|+++ .+|.+|...+...+.+..+...|.+++...|.= .-|.. -++..|+++..+.-
T Consensus 47 ~~N~li~aPTgsGKTlIA~lai~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~Tg 111 (766)
T COG1204 47 DENVLISAPTGSGKTLIALLAILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVGISTG 111 (766)
T ss_pred CCcEEEEcCCCCchHHHHHHHHHHHHHhcCCcEEEEeChHHHHHHHHHHhhhHHhcCCEEEEecC
Confidence 356666 888999988866654443333334555555642 22222 23578888877643
No 482
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=29.23 E-value=3.1e+02 Score=25.96 Aligned_cols=15 Identities=13% Similarity=0.328 Sum_probs=11.2
Q ss_pred HHHHHcCCeEEEEEe
Q 018820 183 KVFTLAGLSVKSYRY 197 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~ 197 (350)
.+.+..|++++.++.
T Consensus 113 ~l~~~~Ga~v~~~~~ 127 (329)
T PRK14045 113 LLDKIMGIETRVYEA 127 (329)
T ss_pred HHHHHCCCEEEEECC
Confidence 456789999887753
No 483
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=28.80 E-value=3.4e+02 Score=23.12 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=44.8
Q ss_pred HHHHHHcCCeEEEEEeecCCCC-CCCHHHHHHHh-hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 182 PKVFTLAGLSVKSYRYYDPATR-GLNFQGLLEDL-GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 182 ~~~~~~~G~~~~~v~~~~~~~~-~~d~~~l~~~l-~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
..+++..|.+++.... +..+| ..+.+.+.+.+ ....++.++++|.+- +...+.+.+.+|++.++++|.-++
T Consensus 113 ~~~l~~~G~~~v~w~~-~~~D~~~~~~~~i~~~~~~~~~~g~Iil~Hd~~----~~~~t~~~l~~~i~~l~~~Gy~~v 185 (191)
T TIGR02764 113 LKAAESLGYTVVHWSV-DSRDWKNPGVESIVDRVVKNTKPGDIILLHASD----SAKQTVKALPTIIKKLKEKGYEFV 185 (191)
T ss_pred HHHHHHcCCeEEEecC-CCCccCCCCHHHHHHHHHhcCCCCCEEEEeCCC----CcHhHHHHHHHHHHHHHHCCCEEE
Confidence 3456678988877766 44333 34566655443 344456777777421 223457889999999999886543
No 484
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate lyase (ICL), and 2-methylisocitrate lyase (MICL). Isocitrate lyase (ICL) catalyzes the conversion of isocitrate to succinate and glyoxylate, the first committed step in the glyoxylate pathway. This carbon-conserving pathway is present in most prokaryotes, lower eukaryotes and plants, but has not been observed in vertebrates. PEP mutase (PEPM) turns phosphoenolpyruvate (PEP) into phosphonopyruvate (P-pyr), an important intermediate in the formation of organophosphonates, which function as antibiotics or play a role in pathogenesis or signaling. P-pyr can be hydrolyzed by phosphonopyruvate hydrolase (PPH) to from pyruvate and phosphate. Oxaloacetate acetylhydrolase (OAH) catalyzes the hydrolytic cleavage of oxaloacetate to
Probab=28.73 E-value=2.4e+02 Score=25.57 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=55.6
Q ss_pred hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee-------cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC
Q 018820 165 HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY-------DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP 237 (350)
Q Consensus 165 ~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-------~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~ 237 (350)
+.+|+.+.+++..-..-..+++.+|++.+.+--+ .+++..++++.+.+.++.-.+...+-++ ..=|+|.-
T Consensus 5 ~~~~~~i~~~~~~D~~sA~~~e~~G~~ai~~s~~~~~~s~G~pD~~~~~~~e~~~~~~~I~~~~~~Pv~--~D~~~G~g- 81 (243)
T cd00377 5 LESGGPLVLPGAWDALSARLAERAGFKAIYTSGAGVAASLGLPDGGLLTLDEVLAAVRRIARAVDLPVI--ADADTGYG- 81 (243)
T ss_pred HhCCCcEEecCCCCHHHHHHHHHcCCCEEEeccHHHHHhcCCCCCCcCCHHHHHHHHHHHHhhccCCEE--EEcCCCCC-
Confidence 3455666666544444455666677776665321 2344567778888776642111111122 35677754
Q ss_pred CHHHHHHHHHHHHhcC--cEEEEccCC
Q 018820 238 TLQQWERIRQLMRSKG--LLPFFDSAY 262 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~--~~ii~DeaY 262 (350)
+.++..+.++...+.| .+.|+|-.+
T Consensus 82 ~~~~~~~~v~~~~~~G~~gv~iED~~~ 108 (243)
T cd00377 82 NALNVARTVRELEEAGAAGIHIEDQVG 108 (243)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 5677777777766665 578889876
No 485
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=28.50 E-value=3.8e+02 Score=23.04 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=41.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHh--cCCCEEEEcCCCCCChHHHHHHc--CCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARH--YHQRTIYIPQPTWGNHPKVFTLA--GLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
..+-+++.+..+...+...+-.+. .|+-.|+++.-|-.++..+.+.. .+.+.++|+ |- -.....+.+.++
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~-D~---~~~~~rfl~~~~-- 95 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPL-DF---PWAVRRFLDHWR-- 95 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE----SS---HHHHHHHHHHH---
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCc-cC---HHHHHHHHHHhC--
Confidence 566666666655554443222222 26778988887777777665542 445666666 21 122333444332
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 218 PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
|+ .++++ .-|-|-.++..|+++|+.++.
T Consensus 96 P~--~~i~~-----------EtElWPnll~~a~~~~ip~~L 123 (186)
T PF04413_consen 96 PD--LLIWV-----------ETELWPNLLREAKRRGIPVVL 123 (186)
T ss_dssp -S--EEEEE-----------S----HHHHHH-----S-EEE
T ss_pred CC--EEEEE-----------ccccCHHHHHHHhhcCCCEEE
Confidence 22 23443 458899999999999876654
No 486
>PRK09354 recA recombinase A; Provisional
Probab=28.49 E-value=5.4e+02 Score=24.79 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCCcHHHHHHHHHHHhC-CCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCCCEEEEcCCCCCChHHHHHHcCCeEE
Q 018820 116 IVGLAEFNKLSAKLILG-ADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQRTIYIPQPTWGNHPKVFTLAGLSVK 193 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g-~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 193 (350)
..|.+.|=++ +| -..+ ..+|..+-...+++=-.++..+.... ..|..++..+.-.......++..|..+.
T Consensus 42 sTGi~~LD~~-----LG~GGip---~G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld 113 (349)
T PRK09354 42 STGSLALDIA-----LGIGGLP---RGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDID 113 (349)
T ss_pred cCCcHHHHHH-----hcCCCCc---CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHH
Confidence 3566666433 34 3333 67777666666665555544444332 3454444444333334456777888755
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC---------CCC-C-CH-----HHHHHHHHHHHhcCcEEE
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT---------GVD-P-TL-----QQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT---------G~~-~-s~-----~~~~~i~~~~~~~~~~ii 257 (350)
.+-+..+++..--++.++..++.. ...+|++-+-..-. |-. . .. ..+.+|..+++++++.+|
T Consensus 114 ~lli~qp~~~Eq~l~i~~~li~s~--~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI 191 (349)
T PRK09354 114 NLLVSQPDTGEQALEIADTLVRSG--AVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVI 191 (349)
T ss_pred HeEEecCCCHHHHHHHHHHHhhcC--CCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 444433322111122222333322 23355554433211 100 0 11 226778888899987766
Q ss_pred E-ccCCC
Q 018820 258 F-DSAYQ 263 (350)
Q Consensus 258 ~-DeaY~ 263 (350)
+ ...+.
T Consensus 192 ~tNQvr~ 198 (349)
T PRK09354 192 FINQIRE 198 (349)
T ss_pred EEEeeee
Confidence 5 33443
No 487
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=28.20 E-value=1.8e+02 Score=28.30 Aligned_cols=89 Identities=8% Similarity=0.128 Sum_probs=50.4
Q ss_pred HHHHHHHhhcCC--CCcEEEEecCCCCCCC--CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh-
Q 018820 207 FQGLLEDLGSAP--AGAIVLLHACAHNPTG--VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV- 281 (350)
Q Consensus 207 ~~~l~~~l~~~~--~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~- 281 (350)
++.+++.+.+.. +.+++=++.-|----| .-.+++-.++|-+++++|++..|+||+--+-... .+.|....+-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT---Gk~WaHehw~l 331 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT---GKFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc---CceeeehhcCC
Confidence 556666665432 2223222333433333 3467899999999999999999999986443221 1223332221
Q ss_pred hcCCcEEEEeccccccCccC
Q 018820 282 ADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 282 ~~~~~vi~~~S~SK~~gl~G 301 (350)
+.... +-+|||-|-..|
T Consensus 332 ~~PpD---~vTFSKK~q~gG 348 (484)
T KOG1405|consen 332 DSPPD---VVTFSKKFQTGG 348 (484)
T ss_pred CCCcc---ceehhhhhhcCc
Confidence 11112 347899886454
No 488
>PRK06483 dihydromonapterin reductase; Provisional
Probab=28.20 E-value=4e+02 Score=23.12 Aligned_cols=91 Identities=11% Similarity=0.056 Sum_probs=39.8
Q ss_pred cCCchhHHHH-HHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEE
Q 018820 148 CLSGTGSLRV-GAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIV 223 (350)
Q Consensus 148 t~G~~~al~l-~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~ 223 (350)
..|+++++-. ++. .+...|..|++.+-.-......++..|+..+..++ .|.+.+.+.++. ...+.-+
T Consensus 7 ItGas~gIG~~ia~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 7 ITGAGQRIGLALAW--HLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADF-------STNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred EECCCChHHHHHHH--HHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCC-------CCHHHHHHHHHHHHhhCCCccE
Confidence 4555556622 222 23456777766543322333334445544433333 234444443332 2122235
Q ss_pred EEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 224 LLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 224 l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
++++-...+.+ ...+.++|++..+
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~ 103 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQ 103 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHH
Confidence 55443222121 2345777877653
No 489
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=28.19 E-value=2.3e+02 Score=26.17 Aligned_cols=61 Identities=23% Similarity=0.274 Sum_probs=0.0
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CC-CCcEEEEecCCCCC--CCCCCCHHHHHHHHH
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---AP-AGAIVLLHACAHNP--TGVDPTLQQWERIRQ 247 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~-~~~~~l~~~~p~NP--TG~~~s~~~~~~i~~ 247 (350)
....++.+|+.-+-+-. +-.+.++-+++.+.++. +. ..+++++ ||| ||..++.+.+++|++
T Consensus 88 ~a~~a~~~Gad~v~~~~--P~y~~~~~~~i~~~~~~v~~a~~~lpi~iY----n~P~~tg~~l~~~~~~~L~~ 154 (288)
T cd00954 88 LAKHAEELGYDAISAIT--PFYYKFSFEEIKDYYREIIAAAASLPMIIY----HIPALTGVNLTLEQFLELFE 154 (288)
T ss_pred HHHHHHHcCCCEEEEeC--CCCCCCCHHHHHHHHHHHHHhcCCCCEEEE----eCccccCCCCCHHHHHHHhc
No 490
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=28.16 E-value=60 Score=30.49 Aligned_cols=25 Identities=12% Similarity=-0.017 Sum_probs=21.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 234 GVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 234 G~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
+-.+|++|+++|++.|+++|+-||=
T Consensus 54 ~~~yT~~ei~ei~~yA~~~gI~vIP 78 (301)
T cd06565 54 RGAYTKEEIREIDDYAAELGIEVIP 78 (301)
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEe
Confidence 4459999999999999999988773
No 491
>PRK06382 threonine dehydratase; Provisional
Probab=27.96 E-value=3.3e+02 Score=26.63 Aligned_cols=77 Identities=16% Similarity=0.030 Sum_probs=43.7
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
.+.|.-..|-+......-.... ..+.|+. +.+|..+..++... +.+.-.-.|++|.-+-..-....+..|++++.
T Consensus 50 nptGSfK~Rga~~~i~~~~~~~--~~~gvv~--aSsGN~g~a~A~aa-~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~ 124 (406)
T PRK06382 50 QKTGSFKSRGAVFKFSKLSEDE--LRNGVIT--ASAGNHAQGVAYAA-SINGIDAKIVMPEYTIPQKVNAVEAYGAHVIL 124 (406)
T ss_pred CCCCCCHHHHHHHHHHhcchhc--cCCeEEE--ECCCHHHHHHHHHH-HHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEE
Confidence 4467777887765542111100 0234665 77788888764321 22232355666655444456678899999986
Q ss_pred EE
Q 018820 195 YR 196 (350)
Q Consensus 195 v~ 196 (350)
++
T Consensus 125 ~~ 126 (406)
T PRK06382 125 TG 126 (406)
T ss_pred EC
Confidence 64
No 492
>PRK11761 cysM cysteine synthase B; Provisional
Probab=27.90 E-value=4.3e+02 Score=24.51 Aligned_cols=53 Identities=9% Similarity=0.122 Sum_probs=33.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEe
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 197 (350)
+.|+. ..+|..+..++. .+. ..-.-.|++|.-.-..-...++..|++++.++-
T Consensus 64 ~~vv~--aSsGN~g~alA~--~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 64 DTLIE--ATSGNTGIALAM--IAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CEEEE--eCCChHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 44665 788888887753 232 222234555543334456677899999999864
No 493
>PRK00208 thiG thiazole synthase; Reviewed
Probab=27.48 E-value=4.7e+02 Score=23.97 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=47.2
Q ss_pred CEEEEcCCCCCChH---HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 169 RTIYIPQPTWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 169 d~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
.+.++-+--|+.+. ..++..|.++++|.+...+... .-+.+.+.+... + +.+++| |--+.+.+|--++
T Consensus 11 SRl~~Gtgky~s~~~~~~ai~asg~~ivTvalrR~~~~~-~~~~~~~~i~~~-~---~~~lpN----TaG~~ta~eAv~~ 81 (250)
T PRK00208 11 SRLLLGTGKYPSPQVMQEAIEASGAEIVTVALRRVNLGQ-GGDNLLDLLPPL-G---VTLLPN----TAGCRTAEEAVRT 81 (250)
T ss_pred ccceEecCCCCCHHHHHHHHHHhCCCeEEEEEEeecCCC-CcchHHhhcccc-C---CEECCC----CCCCCCHHHHHHH
Confidence 34555566666664 4566889999999884322111 235566666431 2 455543 4456789999999
Q ss_pred HHHHHh
Q 018820 246 RQLMRS 251 (350)
Q Consensus 246 ~~~~~~ 251 (350)
++++++
T Consensus 82 a~lare 87 (250)
T PRK00208 82 ARLARE 87 (250)
T ss_pred HHHHHH
Confidence 999998
No 494
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=27.38 E-value=1.8e+02 Score=24.78 Aligned_cols=28 Identities=32% Similarity=0.382 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHhhcCCC--CcEEEEecCCCCCC
Q 018820 203 RGLNFQGLLEDLGSAPA--GAIVLLHACAHNPT 233 (350)
Q Consensus 203 ~~~d~~~l~~~l~~~~~--~~~~l~~~~p~NPT 233 (350)
..-|+..+.+.++...+ .. ++++ .|||+
T Consensus 83 p~~d~~~~l~~l~~~~d~v~~-vllV--gH~P~ 112 (163)
T COG2062 83 PNGDPGTVLDYLEALGDGVGS-VLLV--GHNPL 112 (163)
T ss_pred CCCCHHHHHHHHHHhcccCce-EEEE--CCCcc
Confidence 34467777777765443 33 3333 79998
No 495
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B ....
Probab=27.33 E-value=3.2e+02 Score=23.14 Aligned_cols=63 Identities=17% Similarity=0.282 Sum_probs=42.3
Q ss_pred HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 182 PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 182 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
...++..|.++..+++ +. +.+...+.+. .-..+++...|.+|.- .+...++++.+.++++.++
T Consensus 14 ~~~l~~~~~~~~v~~~-~~-----~~~~~~~~~~---~~d~iii~Gg~~~~~d----~~~~~~~i~~~~~~~~Pil 76 (192)
T PF00117_consen 14 VRALRELGIDVEVVRV-DS-----DFEEPLEDLD---DYDGIIISGGPGSPYD----IEGLIELIREARERKIPIL 76 (192)
T ss_dssp HHHHHHTTEEEEEEET-TG-----GHHHHHHHTT---TSSEEEEECESSSTTS----HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHCCCeEEEEEC-CC-----chhhhhhhhc---CCCEEEECCcCCcccc----ccccccccccccccceEEE
Confidence 4566788988888877 21 2222222222 2245888888998886 7788888898888887766
No 496
>TIGR02079 THD1 threonine dehydratase. This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been characterized by models TIGR01124 and TIGR01127. Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway.
Probab=26.85 E-value=5.7e+02 Score=25.07 Aligned_cols=77 Identities=12% Similarity=0.018 Sum_probs=43.3
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
+.|.-..|-+......-.... . ...|+. ..+|..+..++.. -+.+.-.-.|++|.-+...-...++.+|++++.+
T Consensus 42 ptGSfK~RgA~~~i~~l~~~~-~-~~gvv~--aSsGN~g~a~A~~-a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~vv~v 116 (409)
T TIGR02079 42 PVRSYKIRGAYNFLKQLSDAQ-L-AKGVVC--ASAGNHAQGFAYA-CRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEI 116 (409)
T ss_pred CCCCcHHHHHHHHHHhCCHHh-h-CCEEEE--ECccHHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHHcCCCeeEE
Confidence 446666776655442111100 0 234555 6677888877432 1223333566677655555567788999998777
Q ss_pred Ee
Q 018820 196 RY 197 (350)
Q Consensus 196 ~~ 197 (350)
..
T Consensus 117 ~~ 118 (409)
T TIGR02079 117 IL 118 (409)
T ss_pred EE
Confidence 65
No 497
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=26.81 E-value=1.6e+02 Score=28.44 Aligned_cols=60 Identities=15% Similarity=0.144 Sum_probs=37.2
Q ss_pred CCCEEEEcCCCCC-ChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCC
Q 018820 167 HQRTIYIPQPTWG-NHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDP 237 (350)
Q Consensus 167 ~gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~ 237 (350)
++.+|++-+-..- +....+...|+++.-||+ + .+.+++.+ -.++ .+++-|=|.+|.-...
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~-~-----t~~eeIl~---~~pD--GiflSNGPGDP~~~~~ 238 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPA-D-----TSAEEILA---LNPD--GIFLSNGPGDPAPLDY 238 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcC-C-----CCHHHHHh---hCCC--EEEEeCCCCChhHHHH
Confidence 3456776665543 555566678999999998 2 34444433 3444 3666666999954333
No 498
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=26.80 E-value=4.4e+02 Score=25.97 Aligned_cols=78 Identities=12% Similarity=0.039 Sum_probs=41.4
Q ss_pred CCcHHHHHHHHHHHhCCCCCCcc-CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIR-ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSY 195 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~-~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 195 (350)
.|.-..|.+............+. .+.|+. +.+|..+..++... +...-.-.|++|..+-..-...++..|++++.+
T Consensus 38 tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~--~ssGN~g~alA~~a-~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~ 114 (454)
T TIGR01137 38 GGSVKDRIALRMIEDAEASGRLKPGDTIIE--PTSGNTGIGLALVA-AIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRT 114 (454)
T ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCcHHHHHHHHHH-HHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEc
Confidence 46667776544331111000011 244555 77888888775321 222222445555544334456678999999888
Q ss_pred Ee
Q 018820 196 RY 197 (350)
Q Consensus 196 ~~ 197 (350)
+-
T Consensus 115 ~~ 116 (454)
T TIGR01137 115 PT 116 (454)
T ss_pred CC
Confidence 64
No 499
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=26.45 E-value=25 Score=24.75 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=19.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCc
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~ 254 (350)
+=|.|.. +.++++.|++++++++.
T Consensus 15 ~~~~G~i-~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 15 RIPGGRI-SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp B-GGGEE-EHHHHHHHHHHHHHHST
T ss_pred eCCCEEE-CHHHHHHHHHHHHHhCC
Confidence 5566776 99999999999999874
No 500
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=26.42 E-value=1.8e+02 Score=26.17 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=35.8
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
++++..+...+.+ ..-+...+.+.++... .+..++-+ .-|.....+.+.++++.+.++|+++|.
T Consensus 94 ~a~l~~~~v~~~~-~~~~~~~~~~ai~~a~~~~~~iin~-----S~g~~~~~~~~~~~~~~a~~~gilvV~ 158 (260)
T cd07484 94 KAKIMPVKVLDAN-GSGSLADIANGIRYAADKGAKVINL-----SLGGGLGSTALQEAINYAWNKGVVVVA 158 (260)
T ss_pred CCEEEEEEEECCC-CCcCHHHHHHHHHHHHHCCCeEEEe-----cCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 3466666664432 2335555555544321 22223322 234443556788888999999998885
Done!